ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart57c03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_196911.1| Oryza sativa (japonica cultivar-group) hypothet... 48 0.028
2gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 gen... 48 0.028
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.028
4gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 48 0.028
5ref|NM_001030720.1| Gallus gallus similar to RIKEN cDNA 1300013J... 44 0.43
6emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4,... 44 0.43
7emb|AJ720238.1| Gallus gallus mRNA for hypothetical protein, clo... 44 0.43
8gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 44 0.43
9dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.43
10gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 44 0.43
11gb|AC156569.3| Mus musculus BAC clone RP23-315K10 from chromosom... 44 0.43
12gb|AC154557.2| Mus musculus BAC clone RP23-425M9 from 17, comple... 44 0.43
13emb|CT030155.10| Mouse DNA sequence from clone RP23-425N11 on ch... 44 0.43
14emb|CT030714.5| Mouse DNA sequence from clone RP23-223P19 on chr... 44 0.43
15ref|NM_191356.1| Oryza sativa (japonica cultivar-group), predic... 42 1.7
16ref|XM_525831.1| PREDICTED: Pan troglodytes lymphoid nuclear pro... 42 1.7
17gb|BT019155.1| Zea mays clone Contig818.F mRNA sequence 42 1.7
18ref|NM_001025108.1| Homo sapiens AF4/FMR2 family, member 3 (AFF3... 42 1.7
19ref|NM_002285.2| Homo sapiens AF4/FMR2 family, member 3 (AFF3), ... 42 1.7
20gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 42 1.7
21emb|AL353639.10| Human DNA sequence from clone RP11-664D14 on ch... 42 1.7
22emb|AL139081.21| Human DNA sequence from clone RP11-179A7 on chr... 42 1.7
23gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 42 1.7
24gb|CP000088.1| Thermobifida fusca YX, complete genome 42 1.7
25gb|BC036895.1| Homo sapiens AF4/FMR2 family, member 3, mRNA (cDN... 42 1.7
26gb|AC126178.6| Homo sapiens 12 BAC RP11-567C2 (Roswell Park Canc... 42 1.7
27dbj|AK092327.1| Homo sapiens cDNA FLJ35008 fis, clone OCBBF20121... 42 1.7
28gb|AC093373.2| Homo sapiens BAC clone RP13-516J8 from 2, complet... 42 1.7
29gb|AC008517.7| Homo sapiens chromosome 5 clone CTC-458G6, comple... 42 1.7
30emb|BX930079.2| Gallus gallus finished cDNA, clone ChEST593b14 42 1.7
31dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
32dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
33gb|AC018690.5| Homo sapiens BAC clone RP11-527J8 from 2, complet... 42 1.7
34dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
35ref|XM_343559.2| PREDICTED: Rattus norvegicus lymphoid nuclear p... 42 1.7
36dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 1.7
37dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
38dbj|AK108127.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
39gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 42 1.7
40gb|U34360.1|HSU34360 Human lymphoid nuclear protein (LAF-4) mRNA... 42 1.7
41ref|XM_550081.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.7
42ref|NM_183985.1| Oryza sativa (japonica cultivar-group), predic... 40 6.7
43ref|NM_026415.1| Mus musculus RIKEN cDNA 2310002J15 gene (231000... 40 6.7
44gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 6.7
45ref|XM_415475.1| PREDICTED: Gallus gallus similar to prostagland... 40 6.7
46gb|AC145921.3| Pan troglodytes BAC clone RP43-10J15 from 7, comp... 40 6.7
47gb|AC147050.2| Pan troglodytes BAC clone RP43-138F4 from 7, comp... 40 6.7
48ref|XM_571252.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 6.7
49gb|AC122471.4| Mus musculus BAC clone RP24-322M5 from chromosome... 40 6.7
50gb|AC114737.3| Homo sapiens BAC clone CTD-2192D1 from 7, complet... 40 6.7
51emb|AL590483.32| Human DNA sequence from clone RP11-278H7 on chr... 40 6.7
52ref|XM_499831.1| Yarrowia lipolytica CLIB122, YALI0A07018g predi... 40 6.7
53gb|AC145450.4| Mus musculus strain C57BL/6J clone rp23-430i3, co... 40 6.7
54emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete ... 40 6.7
55emb|AL606521.24| Mouse DNA sequence from clone RP23-280J3 on chr... 40 6.7
56dbj|D89547.1| Gallus gallus mRNA for vitellogenin I, complete cds 40 6.7
57gb|AF461326.1| Drosophila malerkotliana malerkotliana hunchback ... 40 6.7
58gb|AF461320.1| Drosophila mimetica hunchback (hb) gene, partial cds 40 6.7
59gb|AF461319.1| Drosophila lucipennis hunchback (hb) gene, partia... 40 6.7
60ref|NM_142761.1| Drosophila melanogaster CG13859-RA (CG13859), mRNA 40 6.7
61gb|AC007550.70| Mus musculus strain 129S6/SvEvTac chromosome 11a... 40 6.7
62emb|CR406830.1| Gallus gallus finished cDNA, clone ChEST736o3 40 6.7
63dbj|AK003658.1| Mus musculus 18-day embryo whole body cDNA, RIKE... 40 6.7
64gb|AC005522.2| Homo sapiens PAC clone RP5-1129E22 from 7, comple... 40 6.7
65dbj|AK009095.1| Mus musculus adult male tongue cDNA, RIKEN full-... 40 6.7
66gb|AE003738.3| Drosophila melanogaster chromosome 3R, section 76... 40 6.7
67emb|BX322566.6| Zebrafish DNA sequence from clone CH211-209B6 in... 40 6.7
68dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
69dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
70gb|AC009915.5|AC009915 Drosophila melanogaster, chromosome 3R, r... 40 6.7
71gb|AC007472.6|AC007472 Drosophila melanogaster, chromosome 2R, r... 40 6.7
72dbj|AP003205.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
73ref|XM_575082.1| PREDICTED: Rattus norvegicus similar to RIKEN c... 40 6.7
74ref|NM_001004408.1| Gallus gallus vitellogenin I (LOC424547), mRNA 40 6.7
75dbj|AP005885.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
76dbj|AP002913.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
77dbj|AP003336.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
78gb|AC113286.11| Mus musculus chromosome 1, clone RP23-411P10, co... 40 6.7
79gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 6.7
80gb|AE003820.3| Drosophila melanogaster chromosome 2R, section 30... 40 6.7
81gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.7
82emb|AL831797.4|CNS08CAA Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.7
83emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB1... 40 6.7
84emb|AL732309.9| Mouse DNA sequence from clone RP23-132N23 on chr... 40 6.7
85emb|AL591404.4| Mouse DNA sequence from clone RP23-394O9 on chro... 40 6.7
86emb|X15359.1|DVHB Drosophila virilis hunchback (hb) gene for zin... 40 6.7

>ref|NM_196911.1| Oryza sativa (japonica cultivar-group) hypothetical protein
            (OSJNBa0071K18.16), mRNA
          Length = 1941

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                        
Query: 385  catctgcctcgaggtggcgcgttgctgctggtgcgcgctgatgccggcgagcatgtacgc 444
            |||||||||||| |||||||| ||||||  ||||| ||| |  |||||||||| ||||||
Sbjct: 1740 catctgcctcgacgtggcgcgctgctgcgcgtgcgagctcagcccggcgagcacgtacgc 1681



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>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete
             sequence
          Length = 149758

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                         
Query: 385   catctgcctcgaggtggcgcgttgctgctggtgcgcgctgatgccggcgagcatgtacgc 444
             |||||||||||| |||||||| ||||||  ||||| ||| |  |||||||||| ||||||
Sbjct: 18704 catctgcctcgacgtggcgcgctgctgcgcgtgcgagctcagcccggcgagcacgtacgc 18645



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                            
Query: 385      catctgcctcgaggtggcgcgttgctgctggtgcgcgctgatgccggcgagcatgtacgc 444
                |||||||||||| |||||||| ||||||  ||||| ||| |  |||||||||| ||||||
Sbjct: 16641138 catctgcctcgacgtggcgcgctgctgcgcgtgcgagctcagcccggcgagcacgtacgc 16641197



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                            
Query: 385      catctgcctcgaggtggcgcgttgctgctggtgcgcgctgatgccggcgagcatgtacgc 444
                |||||||||||| |||||||| ||||||  ||||| ||| |  |||||||||| ||||||
Sbjct: 16649779 catctgcctcgacgtggcgcgctgctgcgcgtgcgagctcagcccggcgagcacgtacgc 16649838



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>ref|NM_001030720.1| Gallus gallus similar to RIKEN cDNA 1300013J15 (LOC417617), mRNA
          Length = 2591

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 161  ggctgctgctgctgcccttgct 182
            ||||||||||||||||||||||
Sbjct: 2006 ggctgctgctgctgcccttgct 2027



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>emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053K19,
             complete sequence
          Length = 187601

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 155   gccatgggctgctgctgctgcc 176
             ||||||||||||||||||||||
Sbjct: 82104 gccatgggctgctgctgctgcc 82125



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>emb|AJ720238.1| Gallus gallus mRNA for hypothetical protein, clone 13e7
          Length = 2591

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 161  ggctgctgctgctgcccttgct 182
            ||||||||||||||||||||||
Sbjct: 2006 ggctgctgctgctgcccttgct 2027



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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 457    caggtagctctgccggttcgac 478
              ||||||||||||||||||||||
Sbjct: 981713 caggtagctctgccggttcgac 981734



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 155      gccatgggctgctgctgctgcc 176
                ||||||||||||||||||||||
Sbjct: 31748834 gccatgggctgctgctgctgcc 31748855



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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 303     ccgccgtgcccgaccgcaccct 324
               ||||||||||||||||||||||
Sbjct: 1273091 ccgccgtgcccgaccgcaccct 1273070



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>gb|AC156569.3| Mus musculus BAC clone RP23-315K10 from chromosome 13, complete
             sequence
          Length = 165570

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 162   gctgctgctgctgcccttgctc 183
             ||||||||||||||||||||||
Sbjct: 28594 gctgctgctgctgcccttgctc 28615



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>gb|AC154557.2| Mus musculus BAC clone RP23-425M9 from 17, complete sequence
          Length = 186378

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 153   cagccatgggctgctgctgctg 174
             ||||||||||||||||||||||
Sbjct: 69349 cagccatgggctgctgctgctg 69370



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>emb|CT030155.10| Mouse DNA sequence from clone RP23-425N11 on chromosome 17, complete
              sequence
          Length = 189713

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 153    cagccatgggctgctgctgctg 174
              ||||||||||||||||||||||
Sbjct: 103238 cagccatgggctgctgctgctg 103259



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>emb|CT030714.5| Mouse DNA sequence from clone RP23-223P19 on chromosome 13, complete
              sequence
          Length = 176581

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 162    gctgctgctgctgcccttgctc 183
              ||||||||||||||||||||||
Sbjct: 141891 gctgctgctgctgcccttgctc 141912



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>ref|NM_191356.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 510

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 162 gctgctgctgctgcccttgctcggc 186
           |||||||||||||| ||||||||||
Sbjct: 18  gctgctgctgctgctcttgctcggc 42



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>ref|XM_525831.1| PREDICTED: Pan troglodytes lymphoid nuclear protein related to AF4
           (LOC470450), mRNA
          Length = 3183

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 162 gctgctgctgctgcccttgct 182
           |||||||||||||||||||||
Sbjct: 621 gctgctgctgctgcccttgct 601



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>gb|BT019155.1| Zea mays clone Contig818.F mRNA sequence
          Length = 1093

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 151 cgcagccatgggctgctgctgctgc 175
           |||||||||| ||||||||||||||
Sbjct: 426 cgcagccatgtgctgctgctgctgc 402



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>ref|NM_001025108.1| Homo sapiens AF4/FMR2 family, member 3 (AFF3), transcript variant 2,
            mRNA
          Length = 8136

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 162  gctgctgctgctgcccttgct 182
            |||||||||||||||||||||
Sbjct: 1467 gctgctgctgctgcccttgct 1447



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>ref|NM_002285.2| Homo sapiens AF4/FMR2 family, member 3 (AFF3), transcript variant 1,
            mRNA
          Length = 8153

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 162  gctgctgctgctgcccttgct 182
            |||||||||||||||||||||
Sbjct: 1484 gctgctgctgctgcccttgct 1464



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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 268    cgccgcctccgcaactggcgcagccgcca 296
              |||||||| ||| ||||||||||||||||
Sbjct: 760091 cgccgcctgcgcgactggcgcagccgcca 760063



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>emb|AL353639.10| Human DNA sequence from clone RP11-664D14 on chromosome 9 Contains part
             of the MPDZ gene for multiple PDZ domain protein and GSSs,
             complete sequence
          Length = 103822

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 33    taaaattattcagagttcaaa 53
             |||||||||||||||||||||
Sbjct: 48787 taaaattattcagagttcaaa 48807



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>emb|AL139081.21| Human DNA sequence from clone RP11-179A7 on chromosome 13 Contains
             parts of 2 novel genes and the RFC3 gene for replication
             factor C (activator 1) 3, 38kDa, complete sequence
          Length = 185602

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 155   gccatgggctgctgctgctgc 175
             |||||||||||||||||||||
Sbjct: 94024 gccatgggctgctgctgctgc 94004



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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 216    gcagcagcatggcgcgcatgg 236
              |||||||||||||||||||||
Sbjct: 579094 gcagcagcatggcgcgcatgg 579114



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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 209     cgggagcgcagcagcatggcg 229
               |||||||||||||||||||||
Sbjct: 1869571 cgggagcgcagcagcatggcg 1869591



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>gb|BC036895.1| Homo sapiens AF4/FMR2 family, member 3, mRNA (cDNA clone
            IMAGE:5498133), partial cds
          Length = 2005

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 162  gctgctgctgctgcccttgct 182
            |||||||||||||||||||||
Sbjct: 1429 gctgctgctgctgcccttgct 1409



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>gb|AC126178.6| Homo sapiens 12 BAC RP11-567C2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 127439

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 162    gctgctgctgctgcccttgct 182
              |||||||||||||||||||||
Sbjct: 115862 gctgctgctgctgcccttgct 115842



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>dbj|AK092327.1| Homo sapiens cDNA FLJ35008 fis, clone OCBBF2012191, highly similar to
            LAF-4 PROTEIN
          Length = 2914

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 162  gctgctgctgctgcccttgct 182
            |||||||||||||||||||||
Sbjct: 1557 gctgctgctgctgcccttgct 1537



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>gb|AC093373.2| Homo sapiens BAC clone RP13-516J8 from 2, complete sequence
          Length = 25368

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 162 gctgctgctgctgcccttgct 182
           |||||||||||||||||||||
Sbjct: 247 gctgctgctgctgcccttgct 267



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>gb|AC008517.7| Homo sapiens chromosome 5 clone CTC-458G6, complete sequence
          Length = 198942

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 80    cattttgtatgcatatggcta 100
             |||||||||||||||||||||
Sbjct: 21860 cattttgtatgcatatggcta 21880



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>emb|BX930079.2| Gallus gallus finished cDNA, clone ChEST593b14
          Length = 865

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 162 gctgctgctgctgcccttgct 182
           |||||||||||||||||||||
Sbjct: 581 gctgctgctgctgcccttgct 561



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 155      gccatgggctgctgctgctgc 175
                |||||||||||||||||||||
Sbjct: 13701930 gccatgggctgctgctgctgc 13701950



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 162      gctgctgctgctgcccttgctcggc 186
                |||||||||||||| ||||||||||
Sbjct: 32140230 gctgctgctgctgctcttgctcggc 32140206



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 425      atgccggcgagcatgtacgcccga 448
                ||||||||||||||| ||||||||
Sbjct: 13704527 atgccggcgagcatgcacgcccga 13704550



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 160     gggctgctgctgctgccctt 179
               ||||||||||||||||||||
Sbjct: 2145790 gggctgctgctgctgccctt 2145771



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>gb|AC018690.5| Homo sapiens BAC clone RP11-527J8 from 2, complete sequence
          Length = 233117

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 162    gctgctgctgctgcccttgct 182
              |||||||||||||||||||||
Sbjct: 231364 gctgctgctgctgcccttgct 231384



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>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0403C05
          Length = 151085

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 162   gctgctgctgctgcccttgctcggc 186
             |||||||||||||| ||||||||||
Sbjct: 10983 gctgctgctgctgctcttgctcggc 10959



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>ref|XM_343559.2| PREDICTED: Rattus norvegicus lymphoid nuclear protein related to AF4
            (predicted) (Laf4_predicted), mRNA
          Length = 10512

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 162  gctgctgctgctgcccttgct 182
            |||||||||||||||||||||
Sbjct: 7890 gctgctgctgctgcccttgct 7870



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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 370     ctcctcctccggcatcatctg 390
               |||||||||||||||||||||
Sbjct: 4870629 ctcctcctccggcatcatctg 4870609



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>dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1040D06
          Length = 155034

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 155    gccatgggctgctgctgctgc 175
              |||||||||||||||||||||
Sbjct: 100044 gccatgggctgctgctgctgc 100064



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>dbj|AK108127.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-D06, full
           insert sequence
          Length = 954

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 162 gctgctgctgctgcccttgctcggc 186
           |||||||||||||| ||||||||||
Sbjct: 123 gctgctgctgctgctcttgctcggc 147



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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 224     atggcgcgcatggccggcgtc 244
               |||||||||||||||||||||
Sbjct: 2321333 atggcgcgcatggccggcgtc 2321353



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>gb|U34360.1|HSU34360 Human lymphoid nuclear protein (LAF-4) mRNA, complete cds
          Length = 3857

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 162  gctgctgctgctgcccttgct 182
            |||||||||||||||||||||
Sbjct: 1302 gctgctgctgctgcccttgct 1282



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>ref|XM_550081.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 201

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 160 gggctgctgctgctgccctt 179
           ||||||||||||||||||||
Sbjct: 176 gggctgctgctgctgccctt 195



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>ref|NM_183985.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 885

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 425 atgccggcgagcatgtacgcccga 448
           ||||||||||||||| ||||||||
Sbjct: 222 atgccggcgagcatgcacgcccga 199



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>ref|NM_026415.1| Mus musculus RIKEN cDNA 2310002J15 gene (2310002J15Rik), mRNA
          Length = 776

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 163 ctgctgctgctgcccttgct 182
           ||||||||||||||||||||
Sbjct: 454 ctgctgctgctgcccttgct 473



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>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete
              sequence
          Length = 1438950

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 156    ccatgggctgctgctgctgc 175
              ||||||||||||||||||||
Sbjct: 296077 ccatgggctgctgctgctgc 296058



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>ref|XM_415475.1| PREDICTED: Gallus gallus similar to prostaglandin E synthase isoform
            1; microsomal glutathione S-transferase 1-like 1; tumor
            protein p53 inducible protein 12; p53-induced gene 12;
            p53-induced apoptosis protein 12; glutathione
            S-transferase 1-like 1; MGST1-like 1 ... (LOC417193),
            mRNA
          Length = 1365

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 150  ccgcagccatgggctgctgctgct 173
            ||||||||||| ||||||||||||
Sbjct: 1065 ccgcagccatgtgctgctgctgct 1088



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>gb|AC145921.3| Pan troglodytes BAC clone RP43-10J15 from 7, complete sequence
          Length = 201403

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     cgtaaaattattcagagttc 50
              ||||||||||||||||||||
Sbjct: 173102 cgtaaaattattcagagttc 173083



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>gb|AC147050.2| Pan troglodytes BAC clone RP43-138F4 from 7, complete sequence
          Length = 190626

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    cgtaaaattattcagagttc 50
             ||||||||||||||||||||
Sbjct: 26084 cgtaaaattattcagagttc 26065



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>ref|XM_571252.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNF00930) partial mRNA
          Length = 492

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 ccatgggctgctgctgctgc 175
           ||||||||||||||||||||
Sbjct: 82  ccatgggctgctgctgctgc 63



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>gb|AC122471.4| Mus musculus BAC clone RP24-322M5 from chromosome 2, complete sequence
          Length = 206592

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   ctgctgctgctgcccttgct 182
             ||||||||||||||||||||
Sbjct: 28577 ctgctgctgctgcccttgct 28596



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>gb|AC114737.3| Homo sapiens BAC clone CTD-2192D1 from 7, complete sequence
          Length = 99227

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   gctgctgctgctgcccttgc 181
             ||||||||||||||||||||
Sbjct: 58801 gctgctgctgctgcccttgc 58820



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>emb|AL590483.32| Human DNA sequence from clone RP11-278H7 on chromosome 1 Contains the
             3' end of a novel gene (LOC339529), the ZNF238 gene for
             zinc finger protein 238, a novel gene and a CpG island,
             complete sequence
          Length = 98228

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   ccatgggctgctgctgctgc 175
             ||||||||||||||||||||
Sbjct: 60624 ccatgggctgctgctgctgc 60605



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>ref|XM_499831.1| Yarrowia lipolytica CLIB122, YALI0A07018g predicted mRNA
          Length = 3411

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 156  ccatgggctgctgctgctgc 175
            ||||||||||||||||||||
Sbjct: 2701 ccatgggctgctgctgctgc 2682



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>gb|AC145450.4| Mus musculus strain C57BL/6J clone rp23-430i3, complete sequence
          Length = 208207

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    ctgctgctgctgcccttgct 182
              ||||||||||||||||||||
Sbjct: 195869 ctgctgctgctgcccttgct 195850



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>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29
          Length = 339650

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 220    cagcatggcgcgcatggccggcgt 243
              ||||||||||||| ||||||||||
Sbjct: 266023 cagcatggcgcgcctggccggcgt 266000



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>emb|AL606521.24| Mouse DNA sequence from clone RP23-280J3 on chromosome 11 Contains the 5'
              end of the Mtmr3 gene for myotubularin related protein 3,
              two novel genes, the gene for a novel protein similar to
              human ASC-1 complex subunit P100, the gene for a novel
              protein similar to human ubiquinol-cytochrome C reductase
              complex 7.2 kDa protein UQCR10, the Cabp7 gene for calcium
              binding protein 7, the 3' end of the Nf2 gene for
              neurofibromatosis 2 and two CpG islands, complete sequence
          Length = 233997

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 161    ggctgctgctgctgcccttg 180
              ||||||||||||||||||||
Sbjct: 153429 ggctgctgctgctgcccttg 153448



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>dbj|D89547.1| Gallus gallus mRNA for vitellogenin I, complete cds
          Length = 5952

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 163  ctgctgctgctgcccttgct 182
            ||||||||||||||||||||
Sbjct: 3710 ctgctgctgctgcccttgct 3691



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>gb|AF461326.1| Drosophila malerkotliana malerkotliana hunchback (hb) gene, partial
           cds
          Length = 471

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 ccatgggctgctgctgctgc 175
           ||||||||||||||||||||
Sbjct: 118 ccatgggctgctgctgctgc 99



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>gb|AF461320.1| Drosophila mimetica hunchback (hb) gene, partial cds
          Length = 471

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 ccatgggctgctgctgctgc 175
           ||||||||||||||||||||
Sbjct: 100 ccatgggctgctgctgctgc 81



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>gb|AF461319.1| Drosophila lucipennis hunchback (hb) gene, partial cds
          Length = 459

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 ccatgggctgctgctgctgc 175
           ||||||||||||||||||||
Sbjct: 97  ccatgggctgctgctgctgc 78



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>ref|NM_142761.1| Drosophila melanogaster CG13859-RA (CG13859), mRNA
          Length = 384

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 385 catctgcctcgaggtggcgc 404
           ||||||||||||||||||||
Sbjct: 337 catctgcctcgaggtggcgc 318



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>gb|AC007550.70| Mus musculus strain 129S6/SvEvTac chromosome 11a2 clone rp21-434h10,
              complete sequence
          Length = 199956

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 161    ggctgctgctgctgcccttg 180
              ||||||||||||||||||||
Sbjct: 146038 ggctgctgctgctgcccttg 146019



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>emb|CR406830.1| Gallus gallus finished cDNA, clone ChEST736o3
          Length = 1064

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 163 ctgctgctgctgcccttgct 182
           ||||||||||||||||||||
Sbjct: 40  ctgctgctgctgcccttgct 21



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>dbj|AK003658.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length
           enriched library, clone:1110013E23 product:hypothetical
           protein, full insert sequence
          Length = 749

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 163 ctgctgctgctgcccttgct 182
           ||||||||||||||||||||
Sbjct: 420 ctgctgctgctgcccttgct 439



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>gb|AC005522.2| Homo sapiens PAC clone RP5-1129E22 from 7, complete sequence
          Length = 149605

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   gctgctgctgctgcccttgc 181
             ||||||||||||||||||||
Sbjct: 14308 gctgctgctgctgcccttgc 14289



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>dbj|AK009095.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
           library, clone:2310002J15 product:hypothetical protein,
           full insert sequence
          Length = 776

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 163 ctgctgctgctgcccttgct 182
           ||||||||||||||||||||
Sbjct: 454 ctgctgctgctgcccttgct 473



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>gb|AE003738.3| Drosophila melanogaster chromosome 3R, section 76 of 118 of the complete
              sequence
          Length = 287397

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 385    catctgcctcgaggtggcgc 404
              ||||||||||||||||||||
Sbjct: 184624 catctgcctcgaggtggcgc 184643



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>emb|BX322566.6| Zebrafish DNA sequence from clone CH211-209B6 in linkage group 23,
              complete sequence
          Length = 203127

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 157    catgggctgctgctgctgcc 176
              ||||||||||||||||||||
Sbjct: 177814 catgggctgctgctgctgcc 177795



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 165      gctgctgctgcccttgctcggccg 188
                ||||||||| ||||||||||||||
Sbjct: 24959124 gctgctgctccccttgctcggccg 24959147



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 399      tggcgcgttgctgctggtgcgcgctgat 426
                ||||||||||||||||||| | ||||||
Sbjct: 27511230 tggcgcgttgctgctggtgagtgctgat 27511203



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>gb|AC009915.5|AC009915 Drosophila melanogaster, chromosome 3R, region 94A-94A, BAC clone
             BACR09L14, complete sequence
          Length = 167368

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 385   catctgcctcgaggtggcgc 404
             ||||||||||||||||||||
Sbjct: 94444 catctgcctcgaggtggcgc 94463



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>gb|AC007472.6|AC007472 Drosophila melanogaster, chromosome 2R, region 49E-49F, BAC clone
             BACR30D19, complete sequence
          Length = 163052

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 159   tgggctgctgctgctgcccttgct 182
             |||||||||||||||||| |||||
Sbjct: 88035 tgggctgctgctgctgccattgct 88012



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>dbj|AP003205.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1146B04
          Length = 145186

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 425   atgccggcgagcatgtacgcccga 448
             ||||||||||||||| ||||||||
Sbjct: 42855 atgccggcgagcatgcacgcccga 42878



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>ref|XM_575082.1| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 2310002J15
           (LOC499747), mRNA
          Length = 736

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 163 ctgctgctgctgcccttgct 182
           ||||||||||||||||||||
Sbjct: 416 ctgctgctgctgcccttgct 435



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>ref|NM_001004408.1| Gallus gallus vitellogenin I (LOC424547), mRNA
          Length = 5952

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 163  ctgctgctgctgcccttgct 182
            ||||||||||||||||||||
Sbjct: 3710 ctgctgctgctgcccttgct 3691



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>dbj|AP005885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0657H12
          Length = 142688

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 399    tggcgcgttgctgctggtgcgcgctgat 426
              ||||||||||||||||||| | ||||||
Sbjct: 102952 tggcgcgttgctgctggtgagtgctgat 102925



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>dbj|AP002913.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0480E02
          Length = 141862

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   gggctgctgctgctgccctt 179
             ||||||||||||||||||||
Sbjct: 66902 gggctgctgctgctgccctt 66883



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>dbj|AP003336.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1151H08
          Length = 123001

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 425    atgccggcgagcatgtacgcccga 448
              ||||||||||||||| ||||||||
Sbjct: 109765 atgccggcgagcatgcacgcccga 109788



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>gb|AC113286.11| Mus musculus chromosome 1, clone RP23-411P10, complete sequence
          Length = 204629

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 156    ccatgggctgctgctgctgc 175
              ||||||||||||||||||||
Sbjct: 104366 ccatgggctgctgctgctgc 104347



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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 261    cctcggtcgccgcctccgca 280
              ||||||||||||||||||||
Sbjct: 349654 cctcggtcgccgcctccgca 349635



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>gb|AE003820.3| Drosophila melanogaster chromosome 2R, section 30 of 73 of the complete
              sequence
          Length = 263912

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 159    tgggctgctgctgctgcccttgct 182
              |||||||||||||||||| |||||
Sbjct: 157247 tgggctgctgctgctgccattgct 157224



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 165      gctgctgctgcccttgctcggccg 188
                ||||||||| ||||||||||||||
Sbjct: 24887330 gctgctgctccccttgctcggccg 24887353



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>emb|AL831797.4|CNS08CAA Oryza sativa chromosome 12, . BAC OSJNBa0010M16 of library OSJNBa
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 132741

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 165  gctgctgctgcccttgctcggccg 188
            ||||||||| ||||||||||||||
Sbjct: 5744 gctgctgctccccttgctcggccg 5721



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>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 156    ccatgggctgctgctgctgc 175
              ||||||||||||||||||||
Sbjct: 683001 ccatgggctgctgctgctgc 682982



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>emb|AL732309.9| Mouse DNA sequence from clone RP23-132N23 on chromosome 2, complete
              sequence
          Length = 221859

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    ctgctgctgctgcccttgct 182
              ||||||||||||||||||||
Sbjct: 131780 ctgctgctgctgcccttgct 131761



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>emb|AL591404.4| Mouse DNA sequence from clone RP23-394O9 on chromosome 11, complete
            sequence
          Length = 203613

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 159  tgggctgctgctgctgccct 178
            ||||||||||||||||||||
Sbjct: 2050 tgggctgctgctgctgccct 2069



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>emb|X15359.1|DVHB Drosophila virilis hunchback (hb) gene for zinc-finger protein
            transcription factor
          Length = 8807

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 156  ccatgggctgctgctgctgc 175
            ||||||||||||||||||||
Sbjct: 5914 ccatgggctgctgctgctgc 5895


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,843,154
Number of Sequences: 3902068
Number of extensions: 3843154
Number of successful extensions: 241979
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 239779
Number of HSP's gapped (non-prelim): 2200
length of query: 496
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 474
effective length of database: 17,147,199,772
effective search space: 8127772691928
effective search space used: 8127772691928
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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