>gb|AF411228.1|AF411228 Hordeum vulgare ascorbate peroxidase mRNA, complete cds
          Length = 1138

 Score =  361 bits (182), Expect = 9e-97
 Identities = 191/194 (98%)
 Strand = Plus / Minus

                                                                        
Query: 22   catttcgtcctcgacagggaaaaacaaccggaaaggaactacataacacttagcggttca 81
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1116 catttcgttctcgacagggaaaaacaaccggaaaggaactacataacacttagcggttca 1057

                                                                        
Query: 82   cactacaagcaggtccatcacaagatacgaggggtcaaaagcaaaacaatgcaacacccc 141
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1056 cactacaagcaggtccatcacaagatacgaggcgtcaaaagcaaaacaatgcaacacccc 997

                                                                        
Query: 142  atcgaccgaccgatctaatccaaatccagacaaacacatgacatggccactgggccgacg 201
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996  atcgaccgaccgatctaatccaaatccagacaaacacatgacatggccactgggccgacg 937

                          
Query: 202  acagaatcttattg 215
            ||||| ||||||||
Sbjct: 936  acagattcttattg 923



 Score =  105 bits (53), Expect = 9e-20
 Identities = 53/53 (100%)
 Strand = Plus / Minus

                                                                
Query: 279 attaccgaccctcaggcgccgatcttgaatcagcagcagccctcagacgcctc 331
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 attaccgaccctcaggcgccgatcttgaatcagcagcagccctcagacgcctc 825

>gb|BT009090.1| Triticum aestivum clone wkm2c.pk0002.f7:fis, full insert mRNA
           sequence
          Length = 973

 Score =  196 bits (99), Expect = 3e-47
 Identities = 151/167 (90%), Gaps = 6/167 (3%)
 Strand = Plus / Minus

                                                                       
Query: 24  tttcgtcctcgacagggaaaaa-----caaccggaaaggaactacataacacttagcggt 78
           ||||||||||||||||||| ||     ||||||||||||||||||||||||||| || ||
Sbjct: 901 tttcgtcctcgacagggaataacaattcaaccggaaaggaactacataacacttggcagt 842

                                                                       
Query: 79  tcacactacaagcaggtccatcacaagatacgaggggtcaaaagcaaaacaatgcaacac 138
           ||| |||||||||| | ||||||||||| |||||| ||| ||||||||||||||||||||
Sbjct: 841 tcatactacaagcacgcccatcacaagacacgaggcgtc-aaagcaaaacaatgcaacac 783

                                                          
Query: 139 cccatcgaccgaccgatctaatccaaatccagacaaacacatgacat 185
           |||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 782 cccatcgaccgacccatctaatccaagtccagacaaacacatgacat 736



 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                        
Query: 279 attaccgaccctcaggcgccgatcttgaatcagcagcagccctca 323
           |||| ||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 694 attaacgaccttcaggcgccgagcttgaatcagcagcagccctca 650

>ref|NM_202299.1| Arabidopsis thaliana unknown protein AT1G54575 mRNA, complete cds
          Length = 638

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 114 ggtcaaaagcaaaacaatgcaacacc 139
           ||||||||||||||||||| ||||||
Sbjct: 220 ggtcaaaagcaaaacaatgaaacacc 245

>gb|AY773826.1| Arabidopsis thaliana clone pENTR221-At1g54575 hypothetical protein
           (At1g54575) gene, complete cds
          Length = 309

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 114 ggtcaaaagcaaaacaatgcaacacc 139
           ||||||||||||||||||| ||||||
Sbjct: 187 ggtcaaaagcaaaacaatgaaacacc 212

>gb|AY735542.1| Arabidopsis thaliana hypothetical protein AT1G54575 mRNA, complete
           cds
          Length = 670

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 114 ggtcaaaagcaaaacaatgcaacacc 139
           ||||||||||||||||||| ||||||
Sbjct: 233 ggtcaaaagcaaaacaatgaaacacc 258

>gb|BT015723.1| Arabidopsis thaliana At1g54575 gene, complete cds
          Length = 309

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 114 ggtcaaaagcaaaacaatgcaacacc 139
           ||||||||||||||||||| ||||||
Sbjct: 187 ggtcaaaagcaaaacaatgaaacacc 212

>gb|BT015058.1| Arabidopsis thaliana At1g54575 gene, complete cds
          Length = 573

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 114 ggtcaaaagcaaaacaatgcaacacc 139
           ||||||||||||||||||| ||||||
Sbjct: 197 ggtcaaaagcaaaacaatgaaacacc 222

>emb|AL137857.29| Human DNA sequence from clone RP5-1166H10 on chromosome 1p33-35.1
             Contains the MATN1 gene for matrilin 1 cartilage matrix
             protein, a novel gene (FLJ46197, FLJ33163), the 3' end of
             the gene for Lysosomal-associated multispanning membrane
             protein-5 (LAPTM5) and a CpG island, complete sequence
          Length = 152042

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 120   aagcaaaacaatgcaacacccc 141
             ||||||||||||||||||||||
Sbjct: 34235 aagcaaaacaatgcaacacccc 34256

>dbj|AK221685.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL14-90-M11
          Length = 654

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 114 ggtcaaaagcaaaacaatgcaacacc 139
           ||||||||||||||||||| ||||||
Sbjct: 233 ggtcaaaagcaaaacaatgaaacacc 258

>gb|AC005388.1|T22H22 Sequence of BAC T22H22 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 87768

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 114   ggtcaaaagcaaaacaatgcaacacc 139
             ||||||||||||||||||| ||||||
Sbjct: 15804 ggtcaaaagcaaaacaatgaaacacc 15829

>emb|BX818219.1|CNS0AE3B Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL67ZF04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 631

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 114 ggtcaaaagcaaaacaatgcaacacc 139
           ||||||||||||||||||| ||||||
Sbjct: 213 ggtcaaaagcaaaacaatgaaacacc 238

>emb|BX818269.1|CNS0AB1D Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL6ZF07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 599

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 114 ggtcaaaagcaaaacaatgcaacacc 139
           ||||||||||||||||||| ||||||
Sbjct: 204 ggtcaaaagcaaaacaatgaaacacc 229

>emb|BX817787.1|CNS0AAX6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL41ZD08 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 630

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 114 ggtcaaaagcaaaacaatgcaacacc 139
           ||||||||||||||||||| ||||||
Sbjct: 220 ggtcaaaagcaaaacaatgaaacacc 245

>gb|AC162901.4| Mus musculus BAC clone RP23-417K5 from chromosome 8, complete sequence
          Length = 205244

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 308    tcagcagcagccctcagacgc 328
              |||||||||||||||||||||
Sbjct: 101495 tcagcagcagccctcagacgc 101515

>gb|AC019176.4|AC019176 Homo sapiens BAC clone RP11-221H10 from 8, complete sequence
          Length = 170680

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 115   gtcaaaagcaaaacaatgcaa 135
             |||||||||||||||||||||
Sbjct: 63442 gtcaaaagcaaaacaatgcaa 63462

>emb|AL136293.5|CNS01DVX Human chromosome 14 DNA sequence BAC C-2555C10 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 226035

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 161   ccaaatccagacaaacacatg 181
             |||||||||||||||||||||
Sbjct: 48820 ccaaatccagacaaacacatg 48800

>gb|AC124491.5| Mus musculus BAC clone RP23-454B2 from chromosome 8, complete sequence
          Length = 187779

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 308   tcagcagcagccctcagacgc 328
             |||||||||||||||||||||
Sbjct: 33013 tcagcagcagccctcagacgc 32993

>gb|AC148404.7| Medicago truncatula clone mth2-28d4, complete sequence
          Length = 111252

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 114   ggtcaaaagcaaaacaatgcaaca 137
             |||||||||||||||| |||||||
Sbjct: 91712 ggtcaaaagcaaaacattgcaaca 91689


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,878,319
Number of Sequences: 3902068
Number of extensions: 1878319
Number of successful extensions: 35947
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 35922
Number of HSP's gapped (non-prelim): 24
length of query: 331
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 309
effective length of database: 17,147,199,772
effective search space: 5298484729548
effective search space used: 5298484729548
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)