ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart57b08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NPYR_DROME (P25931) Neuropeptide Y receptor (NPY-R) (PR4 receptor) 32 0.37
2NPY5R_HUMAN (Q15761) Neuropeptide Y receptor type 5 (NPY5-R) (NP... 28 4.1
3YNL6_YEAST (P53924) RING finger protein YNL116W 28 5.3
4NPY5R_MOUSE (O70342) Neuropeptide Y receptor type 5 (NPY5-R) (NP... 28 6.9
5NPY5R_RAT (Q63634) Neuropeptide Y receptor type 5 (NPY5-R) (NPY-... 28 6.9
6HUNB_DROTA (O46260) Protein hunchback (Fragments) 28 6.9
7CI041_MOUSE (Q80UY1) Protein C9orf41 homolog 28 6.9
8NPY5R_PIG (O97969) Neuropeptide Y receptor type 5 (NPY5-R) (NPY-... 28 6.9
9LTBP3_MOUSE (Q61810) Latent transforming growth factor beta-bind... 28 6.9

>NPYR_DROME (P25931) Neuropeptide Y receptor (NPY-R) (PR4 receptor)|
          Length = 464

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 9/51 (17%)
 Frame = -3

Query: 130 WF---ACALP-PTDSVYGVPCITWH-----YLCVTKIPNQSYKLYYTYSLF 5
           WF   A ALP P  S   +P   WH     Y+C    P+++ + YYT SLF
Sbjct: 229 WFIALATALPIPIVSGLDIPMSPWHTKCEKYICREMWPSRTQEYYYTLSLF 279



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>NPY5R_HUMAN (Q15761) Neuropeptide Y receptor type 5 (NPY5-R) (NPY-Y5 receptor)|
           (Y5 receptor) (NPYY5)
          Length = 455

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -3

Query: 118 ALPPTDSVYGVPCITWHYLCVTKIPNQSYKLYYTYSL 8
           +L      +G   ++  YLCV   P+ SY++ +T SL
Sbjct: 189 SLVELQETFGSALLSSRYLCVESWPSDSYRIAFTISL 225



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>YNL6_YEAST (P53924) RING finger protein YNL116W|
          Length = 522

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -3

Query: 121 CALPPTDSVYGVPCI-TWHYLCVTKIPNQSY 32
           C + P  +++  PC  +WH+ CV ++   SY
Sbjct: 438 CKIKPCQAIFISPCAHSWHFRCVRRLVMLSY 468



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>NPY5R_MOUSE (O70342) Neuropeptide Y receptor type 5 (NPY5-R) (NPY-Y5 receptor)|
           (Y5 receptor)
          Length = 466

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -3

Query: 94  YGVPCITWHYLCVTKIPNQSYKLYYTYSL 8
           +G   ++  YLCV   P+ SY++ +T SL
Sbjct: 208 FGSALLSSKYLCVESWPSDSYRIAFTISL 236



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>NPY5R_RAT (Q63634) Neuropeptide Y receptor type 5 (NPY5-R) (NPY-Y5 receptor)|
           (Y5 receptor)
          Length = 456

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -3

Query: 94  YGVPCITWHYLCVTKIPNQSYKLYYTYSL 8
           +G   ++  YLCV   P+ SY++ +T SL
Sbjct: 198 FGSALLSSKYLCVESWPSDSYRIAFTISL 226



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>HUNB_DROTA (O46260) Protein hunchback (Fragments)|
          Length = 192

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 17/74 (22%), Positives = 29/74 (39%)
 Frame = +3

Query: 99  ESVGGRAHANHASYISHTCSRR*TTTPHMTPDRRHLKLRDPTQNTKNKIRQMISINRVMN 278
           E +    H +HA +  H  S    ++PH +P    L   +P  NT  ++ Q +   +   
Sbjct: 13  EPISHHHHHHHAHHSHHADSNSNASSPHQSP----LPSPNPPSNTNLQLEQYLKQQQQQQ 68

Query: 279 CNQQRGQSACMHAC 320
              Q+ Q      C
Sbjct: 69  QQHQQQQQPMDTLC 82



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>CI041_MOUSE (Q80UY1) Protein C9orf41 homolog|
          Length = 400

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = +1

Query: 64  GSAMLCMVHRTQSQWAG--EHMQTMLPTFPTHVHDARR 171
           G++M   V+RT+ Q+    E+ Q +LP FP H+   R+
Sbjct: 68  GTSMHERVNRTERQFRSLPENQQKLLPQFPLHLDKIRK 105



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>NPY5R_PIG (O97969) Neuropeptide Y receptor type 5 (NPY5-R) (NPY-Y5 receptor)|
           (Y5 receptor)
          Length = 446

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -3

Query: 94  YGVPCITWHYLCVTKIPNQSYKLYYTYSL 8
           +G   ++  YLCV   P+ SY++ +T SL
Sbjct: 187 FGSAWLSSRYLCVESWPSDSYRIAFTISL 215



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>LTBP3_MOUSE (Q61810) Latent transforming growth factor beta-binding protein 3|
           precursor (LTBP-3)
          Length = 1268

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = -2

Query: 218 ITELEMPSVWCHMWGRRLAS*TCVGNVGSMVCMCSPAH 105
           I E  MP   CH          C+ N GS  C+C P H
Sbjct: 353 INECAMPGNVCHG--------DCLNNPGSYRCVCPPGH 382


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,064,903
Number of Sequences: 219361
Number of extensions: 1102422
Number of successful extensions: 3057
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3056
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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