>OXAA_CLOAB (Q97CW0) Membrane protein oxaA|
          Length = 254

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 15/61 (24%), Positives = 29/61 (47%)
 Frame = +3

Query: 105 FNRTKLEPISPSILTIFCYRLAKLVVH*HPSVHTPGVGWVYIHNLGCETTGTRVHRFTRW 284
           +    + P    +L I  Y +   + +   S+H  G+G+++IH+L  + T      F+ W
Sbjct: 91  YKEKNVNPFGGCLLLIIQYPILIALYYVFYSLHIKGIGFLWIHDLSQKAT------FSNW 144

Query: 285 T 287
           T
Sbjct: 145 T 145

>CYSI_VIBCH (Q9KUX3) Sulfite reductase [NADPH] hemoprotein beta-component (EC|
           1.8.1.2) (SIR-HP) (SIRHP)
          Length = 577

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 34  YSQRLFNFTFEPLSSTDEVTTQPISTEQSW 123
           Y +R  +F F PL  T EV    +ST++ W
Sbjct: 272 YPRRADDFGFIPLEKTLEVAAAVVSTQRDW 301

>KNS1_YEAST (P32350) Dual specificity protein kinase KNS1 (EC 2.7.12.1)|
          Length = 737

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 50  STSPLNHFPAQMKSLPNQFQQNKVGTDFAK 139
           STSP ++ PAQ+ SLP    + ++G+   K
Sbjct: 245 STSPFSNPPAQIASLPQSNLKKQIGSSLRK 274

>PTPRZ_HUMAN (P23471) Receptor-type tyrosine-protein phosphatase zeta precursor|
           (EC 3.1.3.48) (R-PTP-zeta)
          Length = 2314

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = -2

Query: 332 SGMAELPRTVADASSRPPCKTMNPGSCCFAAQIVYINPPHT-RGMNAGMS 186
           SG  ++P T  +++S+P  K          +Q V   PPHT  G +A ++
Sbjct: 490 SGKGDVPNTSLNSTSQPVTKLATEKDISLTSQTVTELPPHTVEGTSASLN 539

>GA2L2_HUMAN (Q8NHY3) GAS2-like protein 2 (Growth arrest-specific 2-like 2)|
           (GAS2-related protein on chromosome 17) (GAR17 protein)
          Length = 880

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -1

Query: 258 FLLFRSPDCVYKPTPHQGYERWDVSGPP 175
           F  FR P+ V  PTP QG  +  +  PP
Sbjct: 482 FFQFREPESVRSPTPVQGLTKIPIRLPP 509

>CCNT1_MOUSE (Q9QWV9) Cyclin-T1 (Cyclin-T) (CycT1)|
          Length = 724

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
 Frame = -2

Query: 335 LSGMAELPRTVADAS----SRPPCKTMNPGSCCFAAQIVYINPPHTRGMNAGMSVDHQ 174
           L  M +LP   +D S    S+P CKT  P         +   PP   G NA  S+D+Q
Sbjct: 605 LPTMTQLPGHSSDTSGLPFSQPSCKTRVPH------MKLDKGPPGANGHNATQSIDYQ 656


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,077,079
Number of Sequences: 219361
Number of extensions: 1336126
Number of successful extensions: 3116
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3116
length of database: 80,573,946
effective HSP length: 99
effective length of database: 58,857,207
effective search space used: 1412572968
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)