Clone Name | rbart57b05 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | CYB_TOXGO (O20672) Cytochrome b | 30 | 3.4 | 2 | CYB_AUSSU (Q9MLL3) Cytochrome b | 29 | 7.6 | 3 | VP282_ARATH (O65421) VPS28 protein homolog 2 | 28 | 9.9 |
---|
>CYB_TOXGO (O20672) Cytochrome b| Length = 368 Score = 30.0 bits (66), Expect = 3.4 Identities = 11/24 (45%), Positives = 18/24 (75%) Frame = -3 Query: 481 ALLAGYLFLCILVYLNQGLYSXIY 410 A A ++FLCIL+++ +GLY+ Y Sbjct: 83 ATTASFVFLCILIHMTRGLYNWSY 106
>CYB_AUSSU (Q9MLL3) Cytochrome b| Length = 367 Score = 28.9 bits (63), Expect = 7.6 Identities = 11/29 (37%), Positives = 20/29 (68%) Frame = -3 Query: 481 ALLAGYLFLCILVYLNQGLYSXIYISIKV 395 A+ A F+CI +++ +GLY +Y++ KV Sbjct: 76 AIGASMFFICIYIHIARGLYYGLYLNKKV 104
>VP282_ARATH (O65421) VPS28 protein homolog 2| Length = 209 Score = 28.5 bits (62), Expect = 9.9 Identities = 16/50 (32%), Positives = 28/50 (56%) Frame = -3 Query: 223 SSNVDVMAGVVSECIVGFIYVMDDGGRALYAIDRIHS*SCILDDVLAPLS 74 S++ A VV+EC+ FI MD + A+D+++ +L D+ A L+ Sbjct: 104 SASTSSSASVVAECVQNFITSMDSLKLNMVAVDQVYP---LLSDLSASLN 150 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,485,327 Number of Sequences: 219361 Number of extensions: 1461072 Number of successful extensions: 3966 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3898 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3966 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)