>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 329      accctgccaagctcaagtttaca 351
                |||||||||||||||||||||||
Sbjct: 31578883 accctgccaagctcaagtttaca 31578905

>dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0435B05
          Length = 150997

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 329   accctgccaagctcaagtttaca 351
             |||||||||||||||||||||||
Sbjct: 91906 accctgccaagctcaagtttaca 91928

>dbj|AK105380.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-A06, full
           insert sequence
          Length = 227

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 329 accctgccaagctcaagtttaca 351
           |||||||||||||||||||||||
Sbjct: 120 accctgccaagctcaagtttaca 98

>dbj|AK103612.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133K04, full
           insert sequence
          Length = 875

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 329 accctgccaagctcaagtttaca 351
           |||||||||||||||||||||||
Sbjct: 803 accctgccaagctcaagtttaca 781

>gb|AC092242.1|AC092242 Drosophila melanogaster, chromosome 2L, region 24E-24F, BAC clone
             BACR09F08, complete sequence
          Length = 111023

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 452   gcatagaaataaatatccagccaaca 477
             ||||||||||||| ||||||||||||
Sbjct: 12372 gcatagaaataaacatccagccaaca 12347

>gb|AC092217.1|AC092217 Drosophila melanogaster, chromosome 2L, region 24D-24E, BAC clone
             BACR11D14, complete sequence
          Length = 158347

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 452   gcatagaaataaatatccagccaaca 477
             ||||||||||||| ||||||||||||
Sbjct: 18039 gcatagaaataaacatccagccaaca 18064

>gb|AC096736.3| Homo sapiens BAC clone RP11-171N4 from 4, complete sequence
          Length = 172989

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 51     atattatttttccaaaatacag 72
              ||||||||||||||||||||||
Sbjct: 121635 atattatttttccaaaatacag 121656

>gb|AE003577.4| Drosophila melanogaster chromosome 2L, section 14 of 83 of the complete
              sequence
          Length = 290034

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 452    gcatagaaataaatatccagccaaca 477
              ||||||||||||| ||||||||||||
Sbjct: 233568 gcatagaaataaacatccagccaaca 233543

>gb|AC005270.1|AC005270 Drosophila melanogaster DNA sequence (P1s DS00830 (D77) and DS04830
            (D98)), complete sequence
          Length = 132666

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 452  gcatagaaataaatatccagccaaca 477
            ||||||||||||| ||||||||||||
Sbjct: 6962 gcatagaaataaacatccagccaaca 6937

>gb|AC154363.2| Mus musculus BAC clone RP23-154K12 from chromosome 13, complete
             sequence
          Length = 203241

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 22    ttttgcatatttttgagtatgtgta 46
             ||||||||||||||| |||||||||
Sbjct: 42058 ttttgcatatttttgtgtatgtgta 42034

>emb|AJ879453.1| Acorus calamus chloroplast, complete genome
          Length = 153821

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 67     atacaggactcaatggagcca 87
              |||||||||||||||||||||
Sbjct: 116021 atacaggactcaatggagcca 116001

>gb|AC161444.4| Mus musculus chromosome 1, clone RP23-446D9, complete sequence
          Length = 182353

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 440    atatactaagatgcatagaaataaatat 467
              ||||| ||||||||||| ||||||||||
Sbjct: 142885 atatattaagatgcatacaaataaatat 142858

>gb|AC163492.3| Mus musculus chromosome 18, clone RP23-411L20, complete sequence
          Length = 201822

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 245    acacatcaaatttcaacagttatg 268
              |||||| |||||||||||||||||
Sbjct: 154202 acacatgaaatttcaacagttatg 154179

>gb|AC107024.5| Homo sapiens 3 BAC RP11-447J13 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 180216

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    aatattatttttccaaaata 69
             ||||||||||||||||||||
Sbjct: 48451 aatattatttttccaaaata 48470

>gb|AC121580.3| Mus musculus BAC clone RP23-255J21 from 9, complete sequence
          Length = 200282

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      aaataaaaatgatctgtttt 25
              ||||||||||||||||||||
Sbjct: 187168 aaataaaaatgatctgtttt 187187

>emb|CR854897.8| Zebrafish DNA sequence from clone DKEY-121N8 in linkage group 15,
              complete sequence
          Length = 185286

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 50     aatattatttttccaaaata 69
              ||||||||||||||||||||
Sbjct: 119571 aatattatttttccaaaata 119552

>emb|BX510329.14| Zebrafish DNA sequence from clone RP71-67M5 in linkage group 7,
             complete sequence
          Length = 101941

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    ctgttttgcatatttttgag 38
             ||||||||||||||||||||
Sbjct: 46507 ctgttttgcatatttttgag 46488

>gb|AC156994.8| Mus musculus chromosome 5, clone RP23-312N12, complete sequence
          Length = 166581

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 454   atagaaataaatatccagccaaca 477
             ||||||||||||| ||||||||||
Sbjct: 32004 atagaaataaatacccagccaaca 32027

>gb|AC104269.1| Caenorhabditis briggsae cosmid CB047C11, complete sequence
          Length = 96428

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    aatattatttttccaaaata 69
             ||||||||||||||||||||
Sbjct: 94709 aatattatttttccaaaata 94690

>emb|CR405704.4| Mouse DNA sequence from clone RP23-395B7 on chromosome 2, complete
             sequence
          Length = 58248

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 14    atgatctgttttgcatatttttga 37
             ||||||||||||||| ||||||||
Sbjct: 38888 atgatctgttttgcagatttttga 38865

>emb|BX120001.10| Zebrafish DNA sequence from clone CH211-217J8 in linkage group 16,
             complete sequence
          Length = 211279

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    tgttttgcatatttttgagt 39
             ||||||||||||||||||||
Sbjct: 73245 tgttttgcatatttttgagt 73226

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 23      tttgcatatttttgagtatgtgtaccgaatat 54
               |||| ||||||||||||||||| | |||||||
Sbjct: 8983693 tttgaatatttttgagtatgtggagcgaatat 8983662

>gb|AC007465.4| Homo sapiens BAC clone RP11-575I21 from 2, complete sequence
          Length = 170305

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 457   gaaataaatatccagccaacaaag 480
             |||||||||||||||||| |||||
Sbjct: 86140 gaaataaatatccagccagcaaag 86117

>gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete genome
          Length = 1308759

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      aaataaaaatgatctgtttt 25
              ||||||||||||||||||||
Sbjct: 203569 aaataaaaatgatctgtttt 203588

>emb|BX813335.2| Mouse DNA sequence from clone RP24-375E5 on chromosome 2, complete
             sequence
          Length = 57516

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 14    atgatctgttttgcatatttttga 37
             ||||||||||||||| ||||||||
Sbjct: 38156 atgatctgttttgcagatttttga 38133

>dbj|AP003755.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1354_H07
          Length = 157974

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 23    tttgcatatttttgagtatgtgtaccgaatat 54
             |||| ||||||||||||||||| | |||||||
Sbjct: 35136 tttgaatatttttgagtatgtggagcgaatat 35105

>dbj|AB016875.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9D7
          Length = 60476

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    tctgttttgcatatttttga 37
             ||||||||||||||||||||
Sbjct: 51038 tctgttttgcatatttttga 51057

>gb|AC126931.4| Mus musculus BAC clone RP23-389M9 from 9, complete sequence
          Length = 189423

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      aaataaaaatgatctgtttt 25
              ||||||||||||||||||||
Sbjct: 178985 aaataaaaatgatctgtttt 178966

>emb|AL732396.11| Mouse DNA sequence from clone RP23-93M14 on chromosome X, complete
              sequence
          Length = 173254

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     tattatttttccaaaataca 71
              ||||||||||||||||||||
Sbjct: 173034 tattatttttccaaaataca 173015

>emb|AL807779.12| Mouse DNA sequence from clone RP23-82E21 on chromosome X, complete
            sequence
          Length = 202297

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 52   tattatttttccaaaataca 71
            ||||||||||||||||||||
Sbjct: 1780 tattatttttccaaaataca 1761


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,072,855
Number of Sequences: 3902068
Number of extensions: 5072855
Number of successful extensions: 97122
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97000
Number of HSP's gapped (non-prelim): 122
length of query: 486
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 464
effective length of database: 17,147,199,772
effective search space: 7956300694208
effective search space used: 7956300694208
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)