ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart57b01 |
|---|---|
| Clone Library Name | barley_pub |
>IFRH_MAIZE (P52580) Isoflavone reductase homolog IRL (EC 1.3.1.-)| Length = 309 Score = 183 bits (464), Expect = 2e-46 Identities = 85/107 (79%), Positives = 100/107 (93%) Frame = -2 Query: 492 ADDPRAENKVLYIKPPANTLSHNELVALWEKKTGKTFQRVYVPEDAVLKQIQEAPIPMNI 313 ADDPRAENKVLYIKPPANTLSHNEL++LWEKKTGKTF+R YVPE+AVLKQIQE+PIP+NI Sbjct: 203 ADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFRREYVPEEAVLKQIQESPIPLNI 262 Query: 312 IFSIGHASYIKGDQTNIEIAPSFGVEASELYPDVKYTTVDDLLNRFL 172 I +IGHA++++G+QT EI P+ GV+ASELYPDVKYTTVD+ LNRFL Sbjct: 263 ILAIGHAAFVRGEQTGFEIDPAKGVDASELYPDVKYTTVDEYLNRFL 309
>IFRH_SOLTU (P52578) Isoflavone reductase homolog (EC 1.3.1.-) (CP100)| Length = 308 Score = 153 bits (387), Expect = 2e-37 Identities = 68/106 (64%), Positives = 88/106 (83%) Frame = -2 Query: 489 DDPRAENKVLYIKPPANTLSHNELVALWEKKTGKTFQRVYVPEDAVLKQIQEAPIPMNII 310 DDP+ NK+LYIKPP N ++ NELV+LWEKKTGK +R+YVPE+ VLK IQEA +PMN+ Sbjct: 203 DDPKTLNKILYIKPPHNIITLNELVSLWEKKTGKNLERLYVPEEQVLKNIQEASVPMNVG 262 Query: 309 FSIGHASYIKGDQTNIEIAPSFGVEASELYPDVKYTTVDDLLNRFL 172 SI H +++KGD TN EI PSFGVEASE+YPDVKYT +D++LN+++ Sbjct: 263 LSIYHTAFVKGDHTNFEIEPSFGVEASEVYPDVKYTPIDEILNQYV 308
>IFRH_ARATH (P52577) Isoflavone reductase homolog P3 (EC 1.3.1.-)| Length = 310 Score = 144 bits (363), Expect = 1e-34 Identities = 67/105 (63%), Positives = 85/105 (80%) Frame = -2 Query: 489 DDPRAENKVLYIKPPANTLSHNELVALWEKKTGKTFQRVYVPEDAVLKQIQEAPIPMNII 310 DDPR NK+LYIKP NTLS NE+V LWEKK GK+ ++ ++PE+ +LK IQE+PIP+N++ Sbjct: 206 DDPRTLNKILYIKPSNNTLSMNEIVTLWEKKIGKSLEKTHLPEEQLLKSIQESPIPINVV 265 Query: 309 FSIGHASYIKGDQTNIEIAPSFGVEASELYPDVKYTTVDDLLNRF 175 SI HA ++ GD TNI I PSFGVEASELYPDVKYT+VD+ L+ F Sbjct: 266 LSINHAVFVNGD-TNISIEPSFGVEASELYPDVKYTSVDEYLSYF 309
>IFRH_TOBAC (P52579) Isoflavone reductase homolog A622 (EC 1.3.1.-)| Length = 310 Score = 125 bits (315), Expect = 5e-29 Identities = 54/106 (50%), Positives = 78/106 (73%) Frame = -2 Query: 489 DDPRAENKVLYIKPPANTLSHNELVALWEKKTGKTFQRVYVPEDAVLKQIQEAPIPMNII 310 DDPR NK L+++PPAN LS NE+V+LWE K GKT +++Y+ E+ +L+ +QE P+P+ Sbjct: 205 DDPRTLNKTLHMRPPANILSFNEIVSLWEDKIGKTLEKLYLSEEDILQIVQEGPLPLRTN 264 Query: 309 FSIGHASYIKGDQTNIEIAPSFGVEASELYPDVKYTTVDDLLNRFL 172 +I H+ ++ GD N E+ P GVEA+ELYP VKYTTVD+ N+F+ Sbjct: 265 LAICHSVFVNGDSANFEVQPPTGVEATELYPKVKYTTVDEFYNKFV 310
>IFR_MEDSA (P52575) Isoflavone reductase (EC 1.3.1.45) (IFR)| (2'-hydroxyisoflavone reductase) (NADPH:isoflavone oxidoreductase) Length = 318 Score = 112 bits (281), Expect = 4e-25 Identities = 54/107 (50%), Positives = 74/107 (69%) Frame = -2 Query: 492 ADDPRAENKVLYIKPPANTLSHNELVALWEKKTGKTFQRVYVPEDAVLKQIQEAPIPMNI 313 A+DP NK ++I+ P N L+ NE++ALWEKK GKT ++ YV E+ VLK IQE+ P N Sbjct: 213 ANDPNTLNKAVHIRLPENYLTQNEVIALWEKKIGKTLEKTYVSEEQVLKDIQESSFPHNY 272 Query: 312 IFSIGHASYIKGDQTNIEIAPSFGVEASELYPDVKYTTVDDLLNRFL 172 + ++ H+ IKGD EI P+ +EASE YPDV YTT D+ LN+F+ Sbjct: 273 LLALYHSQQIKGDAV-YEIDPAKDIEASEAYPDVTYTTADEYLNQFV 318
>IFR_PEA (P52576) Isoflavone reductase (EC 1.3.1.45) (IFR)| (2'-hydroxyisoflavone reductase) (NADPH:isoflavone oxidoreductase) Length = 318 Score = 108 bits (270), Expect = 8e-24 Identities = 53/107 (49%), Positives = 73/107 (68%) Frame = -2 Query: 492 ADDPRAENKVLYIKPPANTLSHNELVALWEKKTGKTFQRVYVPEDAVLKQIQEAPIPMNI 313 A+DP NK ++I+ P N L+ NE++ALWEKK GKT ++ YV E+ VLK IQ + P N Sbjct: 213 ANDPNTLNKAVHIRLPNNYLTANEVIALWEKKIGKTLEKTYVSEEQVLKDIQTSSFPHNY 272 Query: 312 IFSIGHASYIKGDQTNIEIAPSFGVEASELYPDVKYTTVDDLLNRFL 172 + ++ H+ IKGD EI P+ VEA + YPDVKYTT D+ LN+F+ Sbjct: 273 LLALYHSQQIKGDAV-YEIDPAKDVEAYDAYPDVKYTTADEYLNQFV 318
>IFR_CICAR (Q00016) Isoflavone reductase (EC 1.3.1.45) (IFR)| (2'-hydroxyisoflavone reductase) (NADPH:isoflavone oxidoreductase) Length = 318 Score = 105 bits (261), Expect = 9e-23 Identities = 51/107 (47%), Positives = 73/107 (68%) Frame = -2 Query: 492 ADDPRAENKVLYIKPPANTLSHNELVALWEKKTGKTFQRVYVPEDAVLKQIQEAPIPMNI 313 A+DPR NK ++I+ P N L+ NE+V+LWEKK GKT ++ Y+ E+ VLK I + P N Sbjct: 213 ANDPRTLNKAVHIRLPHNYLTSNEVVSLWEKKIGKTLEKSYISEEKVLKDINVSTFPHNY 272 Query: 312 IFSIGHASYIKGDQTNIEIAPSFGVEASELYPDVKYTTVDDLLNRFL 172 + ++ H+ IKGD EI P+ EA +LYPDVKYTT D+ L++F+ Sbjct: 273 LLALYHSQQIKGDAV-YEIDPAKDAEAYDLYPDVKYTTADEYLDQFV 318
>LAR_DESUN (Q84V83) Leucoanthocyanidin reductase (EC 1.17.1.3) (Leucocyanidin| reductase) Length = 382 Score = 80.1 bits (196), Expect = 3e-15 Identities = 43/106 (40%), Positives = 57/106 (53%) Frame = -2 Query: 489 DDPRAENKVLYIKPPANTLSHNELVALWEKKTGKTFQRVYVPEDAVLKQIQEAPIPMNII 310 DD R NK ++ +P +N S NEL +LWEKK G+T R V D +L E IP +I+ Sbjct: 212 DDIRTLNKNVHFRPSSNCYSINELASLWEKKIGRTLPRFTVTADKLLAHAAENIIPESIV 271 Query: 309 FSIGHASYIKGDQTNIEIAPSFGVEASELYPDVKYTTVDDLLNRFL 172 S H +I G Q N I VE LYPD K+ ++DD F+ Sbjct: 272 SSFTHDIFINGCQVNFSIDEHSDVEIDTLYPDEKFRSLDDCYEDFV 317
>IFRH_LUPAL (P52581) Isoflavone reductase homolog (EC 1.3.1.-)| Length = 312 Score = 75.5 bits (184), Expect = 7e-14 Identities = 41/108 (37%), Positives = 61/108 (56%), Gaps = 2/108 (1%) Frame = -2 Query: 489 DDPRAENKVLYIKPPANTLSHNELVALWEKKTGKTFQRVYVPEDAVLKQIQEAPIPMNII 310 DDPR NK +Y++PP N L+H EL+ WE+ GK ++ + E L ++ + Sbjct: 208 DDPRTLNKTVYLRPPENILTHKELIEKWEELIGKQLEKNSISEKDFLSTLKGLDFASQV- 266 Query: 309 FSIGHASYI--KGDQTNIEIAPSFGVEASELYPDVKYTTVDDLLNRFL 172 +GH +I +G TN EI + G EASELYP+V YT +D L ++ Sbjct: 267 -GVGHFYHIFYEGCLTNFEIGEN-GEEASELYPEVNYTRMDQYLKVYV 312
>RS4E_METJA (P54039) 30S ribosomal protein S4e| Length = 244 Score = 34.3 bits (77), Expect = 0.19 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 9/76 (11%) Frame = -2 Query: 390 KTFQRVYVPEDAVLKQIQEAPIPMNIIFSIGHASYIKGDQTNIEIAPSFGVEASELYPDV 211 K + VY D +L I E I +I F +G +YI G + + A +E +YPD+ Sbjct: 155 KAEEDVYKTGDTLLISIPEQEIKAHIPFEVGKLAYITGGKHVGDFAKIVEIERRGIYPDI 214 Query: 210 ---------KYTTVDD 190 K+ TV D Sbjct: 215 VTLENMDGEKFKTVKD 230
>LYS1_SCHPO (Q09694) Saccharopine dehydrogenase [NAD+, L-lysine-forming] (EC| 1.5.1.7) (Lysine--2-oxoglutarate reductase) (SDH) Length = 368 Score = 32.7 bits (73), Expect = 0.54 Identities = 15/55 (27%), Positives = 25/55 (45%) Frame = -2 Query: 489 DDPRAENKVLYIKPPANTLSHNELVALWEKKTGKTFQRVYVPEDAVLKQIQEAPI 325 D P E K + PP +S + L L +++ + F +P LK + AP+ Sbjct: 299 DHPTVEVKGVTTPPPLEVISIDHLPTLLPRESSEAFSEALIPSLLALKDVDNAPV 353
>RS4E_METMP (P62428) 30S ribosomal protein S4e| Length = 244 Score = 32.0 bits (71), Expect = 0.93 Identities = 21/60 (35%), Positives = 28/60 (46%) Frame = -2 Query: 390 KTFQRVYVPEDAVLKQIQEAPIPMNIIFSIGHASYIKGDQTNIEIAPSFGVEASELYPDV 211 K + VY D+VL I E I ++ F G +YI G + E A VE LY D+ Sbjct: 155 KAEEDVYKTGDSVLISIPEQSIAGHVAFGEGKLAYITGGKHVGEFAKIVEVENRALYSDI 214
>PHOL_SHIFL (P0A9K6) PhoH-like protein| Length = 359 Score = 31.2 bits (69), Expect = 1.6 Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 1/116 (0%) Frame = -2 Query: 483 PRAENKVLYIKPPANTLSHNELVALWEKKTGKTFQRVYVPEDAVLKQ-IQEAPIPMNIIF 307 PR N+ YI AN L H+ + TGKT+ V DA+ +Q I+ + + Sbjct: 133 PRTPNQAQYI---ANILDHDITFGVGPAGTGKTYLAVAAAVDALERQEIRRILLTRPAVE 189 Query: 306 SIGHASYIKGDQTNIEIAPSFGVEASELYPDVKYTTVDDLLNRFL*RHAPTVYV*G 139 + ++ GD + ++ P L+ + + V+ L+ R + AP Y+ G Sbjct: 190 AGEKLGFLPGDLSQ-KVDPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLAYMRG 244
>PHOL_ECOLI (P0A9K3) PhoH-like protein| Length = 359 Score = 31.2 bits (69), Expect = 1.6 Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 1/116 (0%) Frame = -2 Query: 483 PRAENKVLYIKPPANTLSHNELVALWEKKTGKTFQRVYVPEDAVLKQ-IQEAPIPMNIIF 307 PR N+ YI AN L H+ + TGKT+ V DA+ +Q I+ + + Sbjct: 133 PRTPNQAQYI---ANILDHDITFGVGPAGTGKTYLAVAAAVDALERQEIRRILLTRPAVE 189 Query: 306 SIGHASYIKGDQTNIEIAPSFGVEASELYPDVKYTTVDDLLNRFL*RHAPTVYV*G 139 + ++ GD + ++ P L+ + + V+ L+ R + AP Y+ G Sbjct: 190 AGEKLGFLPGDLSQ-KVDPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLAYMRG 244
>PHOL_ECOL6 (P0A9K4) PhoH-like protein| Length = 359 Score = 31.2 bits (69), Expect = 1.6 Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 1/116 (0%) Frame = -2 Query: 483 PRAENKVLYIKPPANTLSHNELVALWEKKTGKTFQRVYVPEDAVLKQ-IQEAPIPMNIIF 307 PR N+ YI AN L H+ + TGKT+ V DA+ +Q I+ + + Sbjct: 133 PRTPNQAQYI---ANILDHDITFGVGPAGTGKTYLAVAAAVDALERQEIRRILLTRPAVE 189 Query: 306 SIGHASYIKGDQTNIEIAPSFGVEASELYPDVKYTTVDDLLNRFL*RHAPTVYV*G 139 + ++ GD + ++ P L+ + + V+ L+ R + AP Y+ G Sbjct: 190 AGEKLGFLPGDLSQ-KVDPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLAYMRG 244
>PHOL_ECO57 (P0A9K5) PhoH-like protein| Length = 359 Score = 31.2 bits (69), Expect = 1.6 Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 1/116 (0%) Frame = -2 Query: 483 PRAENKVLYIKPPANTLSHNELVALWEKKTGKTFQRVYVPEDAVLKQ-IQEAPIPMNIIF 307 PR N+ YI AN L H+ + TGKT+ V DA+ +Q I+ + + Sbjct: 133 PRTPNQAQYI---ANILDHDITFGVGPAGTGKTYLAVAAAVDALERQEIRRILLTRPAVE 189 Query: 306 SIGHASYIKGDQTNIEIAPSFGVEASELYPDVKYTTVDDLLNRFL*RHAPTVYV*G 139 + ++ GD + ++ P L+ + + V+ L+ R + AP Y+ G Sbjct: 190 AGEKLGFLPGDLSQ-KVDPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLAYMRG 244
>TILS_BACFR (Q64WF9) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 435 Score = 30.4 bits (67), Expect = 2.7 Identities = 11/44 (25%), Positives = 24/44 (54%) Frame = -2 Query: 426 NELVALWEKKTGKTFQRVYVPEDAVLKQIQEAPIPMNIIFSIGH 295 N+ L+ + G+ +R+ PE ++ + + P+P I+F + H Sbjct: 222 NDAATLYNQSIGEARKRILTPEGIRIEALLQEPVPEAILFEVLH 265
>HISZ_SYNY3 (P74592) ATP phosphoribosyltransferase regulatory subunit| Length = 401 Score = 30.4 bits (67), Expect = 2.7 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +1 Query: 178 PVEQVVDGGVLDVRVQLARLHPERRRDLDVG 270 PV+ +G QL R HP+RR +LD+G Sbjct: 341 PVDDTAEGATFRHAQQLRRQHPDRRVELDLG 371
>PROA_PASMU (Q9CM98) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 420 Score = 30.4 bits (67), Expect = 2.7 Identities = 14/38 (36%), Positives = 27/38 (71%) Frame = +1 Query: 124 RHHQLASNVHSRSMSSEEPVEQVVDGGVLDVRVQLARL 237 R + +A++VH +S +PV Q++DGG+LD +++ R+ Sbjct: 75 RLNDIANDVH-HVISLADPVGQLIDGGILDSGLKIERV 111
>RS4E_METVA (P14023) 30S ribosomal protein S4e| Length = 244 Score = 30.4 bits (67), Expect = 2.7 Identities = 18/60 (30%), Positives = 29/60 (48%) Frame = -2 Query: 390 KTFQRVYVPEDAVLKQIQEAPIPMNIIFSIGHASYIKGDQTNIEIAPSFGVEASELYPDV 211 K + +Y D+VL + E + ++ F+ G +YI G + E A VE LY D+ Sbjct: 155 KAEEDIYKTGDSVLVSLPEQAVVGHVEFNEGKLAYITGGKHVGEFAKVVEVEKRTLYSDI 214
>PEPCK_ARATH (Q9T074) Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (PEP| carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) Length = 671 Score = 30.0 bits (66), Expect = 3.5 Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 12/104 (11%) Frame = +2 Query: 182 LSKSSTVVYLTSGYSSLASTPNDG------------AISMLVWSPLMYDACPIEKMMFIG 325 L+ + T+ + SGY++L + DG + ++ P Y A EKM G Sbjct: 495 LNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMKSQG 554 Query: 326 IGASWICFRTASSGTYTLWNVLPVFFSHSATSSLCDSVLAGGLM 457 W+ S G+Y + N + + + T + D++ +G L+ Sbjct: 555 -ATGWLVNTGWSGGSYGVGNRIKLAY----TRKIIDAIHSGSLL 593
>MVIM_SALTY (P37168) Virulence factor mviM| Length = 307 Score = 29.6 bits (65), Expect = 4.6 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = +1 Query: 133 QLASNVHSRSMSSEEPVEQVVDGGVLDV 216 Q+ +++H R+ S E V+ V DGG+ DV Sbjct: 208 QITTSMHRRAGSQRESVQAVTDGGLYDV 235
>RPOB_UREPA (Q9PQV6) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1434 Score = 29.3 bits (64), Expect = 6.0 Identities = 17/49 (34%), Positives = 23/49 (46%) Frame = -2 Query: 336 EAPIPMNIIFSIGHASYIKGDQTNIEIAPSFGVEASELYPDVKYTTVDD 190 E P MNI + AS K D+ +AP + VE + D KY T + Sbjct: 684 ETPEGMNIGLIMSLASLAKVDENGFIVAPYYVVEDGVVKEDYKYLTAHE 732
>YBL4_YEAST (P38211) Hypothetical protein YBR004C precursor| Length = 433 Score = 29.3 bits (64), Expect = 6.0 Identities = 25/118 (21%), Positives = 46/118 (38%), Gaps = 19/118 (16%) Frame = +2 Query: 173 RNLLSKSSTVVYLTSGYSSLASTPNDGAISMLVWSPLMYDACPIEKMMFIGIGASW---- 340 R + K+S + +LTS L S ++ + + C I + SW Sbjct: 145 RTIAKKTSLLFFLTSAAGFLTSIYSEPLSFFFAFVGIWSRECTISVPVLGQFDISWRYWF 204 Query: 341 -------ICFRTASS--------GTYTLWNVLPVFFSHSATSSLCDSVLAGGLMYSTL 469 CF AS G Y +++++ + + ++C +L+G LM+S L Sbjct: 205 PYSFISMACFTLASLNRSNCVLLGIYFIFDLIELTKNRKFVKAICFPLLSGSLMFSAL 262
>PEPC2_UROPA (Q9XFA2) Phosphoenolpyruvate carboxykinase [ATP] 2 (EC 4.1.1.49)| Length = 626 Score = 29.3 bits (64), Expect = 6.0 Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 12/104 (11%) Frame = +2 Query: 182 LSKSSTVVYLTSGYSSLASTPNDG------------AISMLVWSPLMYDACPIEKMMFIG 325 L+ + T+ + SGY+++ + DG + +++ P Y A EKM G Sbjct: 450 LNLAQTMYHFISGYTAIVAGTEDGVKEPTATFSACFGAAFIMYHPTKYAAMLAEKMQKYG 509 Query: 326 IGASWICFRTASSGTYTLWNVLPVFFSHSATSSLCDSVLAGGLM 457 W+ S G Y + N + + + T + D++ +G L+ Sbjct: 510 -ATGWLVNTGWSGGRYGVGNRIKLPY----TRKIIDAIHSGELL 548
>MNHD_STAAR (Q6GID9) Na(+)/H(+) antiporter subunit D (Mnh complex subunit D)| Length = 498 Score = 29.3 bits (64), Expect = 6.0 Identities = 18/58 (31%), Positives = 25/58 (43%) Frame = +2 Query: 251 GAISMLVWSPLMYDACPIEKMMFIGIGASWICFRTASSGTYTLWNVLPVFFSHSATSS 424 G M VW P Y A PI + F G + + G Y + L +FFS + + S Sbjct: 225 GVFPMFVWLPSAYYAPPIPIIAFFGALLTKV-------GVYAITRTLSLFFSDNVSFS 275
>MNHD_STAAW (P60687) Na(+)/H(+) antiporter subunit D (Mnh complex subunit D)| Length = 498 Score = 28.9 bits (63), Expect = 7.8 Identities = 18/58 (31%), Positives = 25/58 (43%) Frame = +2 Query: 251 GAISMLVWSPLMYDACPIEKMMFIGIGASWICFRTASSGTYTLWNVLPVFFSHSATSS 424 G M VW P Y A PI + F G + + G Y + L +FFS + + S Sbjct: 225 GVFPMFVWLPSAYYAPPIPIIAFFGALLTKV-------GVYAIARTLSLFFSDNVSFS 275
>MNHD_STAAU (P60686) Na(+)/H(+) antiporter subunit D (Mnh complex subunit D)| Length = 498 Score = 28.9 bits (63), Expect = 7.8 Identities = 18/58 (31%), Positives = 25/58 (43%) Frame = +2 Query: 251 GAISMLVWSPLMYDACPIEKMMFIGIGASWICFRTASSGTYTLWNVLPVFFSHSATSS 424 G M VW P Y A PI + F G + + G Y + L +FFS + + S Sbjct: 225 GVFPMFVWLPSAYYAPPIPIIAFFGALLTKV-------GVYAIARTLSLFFSDNVSFS 275
>MNHD_STAAS (Q6GAX7) Na(+)/H(+) antiporter subunit D (Mnh complex subunit D)| Length = 498 Score = 28.9 bits (63), Expect = 7.8 Identities = 18/58 (31%), Positives = 25/58 (43%) Frame = +2 Query: 251 GAISMLVWSPLMYDACPIEKMMFIGIGASWICFRTASSGTYTLWNVLPVFFSHSATSS 424 G M VW P Y A PI + F G + + G Y + L +FFS + + S Sbjct: 225 GVFPMFVWLPSAYYAPPIPIIAFFGALLTKV-------GVYAIARTLSLFFSDNVSFS 275
>MNHD_STAAN (P60685) Na(+)/H(+) antiporter subunit D (Mnh complex subunit D)| Length = 498 Score = 28.9 bits (63), Expect = 7.8 Identities = 18/58 (31%), Positives = 25/58 (43%) Frame = +2 Query: 251 GAISMLVWSPLMYDACPIEKMMFIGIGASWICFRTASSGTYTLWNVLPVFFSHSATSS 424 G M VW P Y A PI + F G + + G Y + L +FFS + + S Sbjct: 225 GVFPMFVWLPSAYYAPPIPIIAFFGALLTKV-------GVYAIARTLSLFFSDNVSFS 275
>MNHD_STAAM (P60684) Na(+)/H(+) antiporter subunit D (Mnh complex subunit D)| Length = 498 Score = 28.9 bits (63), Expect = 7.8 Identities = 18/58 (31%), Positives = 25/58 (43%) Frame = +2 Query: 251 GAISMLVWSPLMYDACPIEKMMFIGIGASWICFRTASSGTYTLWNVLPVFFSHSATSS 424 G M VW P Y A PI + F G + + G Y + L +FFS + + S Sbjct: 225 GVFPMFVWLPSAYYAPPIPIIAFFGALLTKV-------GVYAIARTLSLFFSDNVSFS 275
>MNHD_STAAC (Q5HHD6) Na(+)/H(+) antiporter subunit D (Mnh complex subunit D)| Length = 498 Score = 28.9 bits (63), Expect = 7.8 Identities = 18/58 (31%), Positives = 25/58 (43%) Frame = +2 Query: 251 GAISMLVWSPLMYDACPIEKMMFIGIGASWICFRTASSGTYTLWNVLPVFFSHSATSS 424 G M VW P Y A PI + F G + + G Y + L +FFS + + S Sbjct: 225 GVFPMFVWLPSAYYAPPIPIIAFFGALLTKV-------GVYAIARTLSLFFSDNVSFS 275 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,416,199 Number of Sequences: 219361 Number of extensions: 1239079 Number of successful extensions: 4083 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 3978 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4077 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3478785780 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
