ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart57b01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|U33318.1|ZMU33318 Zea mays sulfur starvation induced isoflavo... 234 2e-58
2gb|AY110531.1| Zea mays CL1726_-1 mRNA sequence 222 8e-55
3ref|NM_183485.2| Oryza sativa (japonica cultivar-group), mRNA 100 8e-18
4gb|AY071920.1| Oryza sativa isoflavone reductase-like protein mR... 100 8e-18
5dbj|AK109339.2| Oryza sativa (japonica cultivar-group) cDNA clon... 100 8e-18
6dbj|AK102701.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 8e-18
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
8dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
9gb|AY651065.1| Musa acuminata isoflavone reductase (IFR) mRNA, p... 92 2e-15
10ref|NM_183484.2| Oryza sativa (japonica cultivar-group), mRNA 70 7e-09
11dbj|AK119550.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
12dbj|AK104735.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
13dbj|AK104669.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
14dbj|AK104238.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
15dbj|AK104189.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
16dbj|AK098946.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
17dbj|AK061325.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
18gb|AY837829.1| Linum usitatissimum putative phenylcoumaran benzy... 60 7e-06
19gb|AF242490.2|AF242490 Pinus taeda phenylcoumaran benzylic ether... 50 0.007
20gb|AF081678.1|AF081678 Pinus taeda phenylcoumaran benzylic ether... 50 0.007
21gb|AC126029.3| Mus musculus BAC clone RP23-389K5 from chromosome... 46 0.11
22gb|AC122861.4| Mus musculus BAC clone RP23-140G16 from 19, compl... 46 0.11
23emb|BX649345.16| Zebrafish DNA sequence from clone DKEY-161F11 i... 44 0.43
24emb|AL031274.1|HS798A17 Human DNA sequence from clone RP4-798A17... 42 1.7
25emb|BX293568.7| Zebrafish DNA sequence from clone CH211-215F13 i... 42 1.7
26emb|AM113472.1| Micromonospora sp. ML1 thiocoraline gene cluster 42 1.7
27gb|AC121523.6| Mus musculus chromosome 18, clone RP24-92N23, com... 40 6.7
28emb|BX927158.14| Zebrafish DNA sequence from clone DKEY-106K1 in... 40 6.7
29gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 6.7
30gb|AC161177.4| Mus musculus chromosome 18, clone RP24-131H12, co... 40 6.7
31ref|XM_310909.2| Anopheles gambiae str. PEST ENSANGP00000012709 ... 40 6.7 
>gb|U33318.1|ZMU33318 Zea mays sulfur starvation induced isoflavone reductase-like IRL
           (IRL) mRNA, complete cds
          Length = 1325

 Score =  234 bits (118), Expect = 2e-58
 Identities = 178/198 (89%)
 Strand = Plus / Minus

                                                                       
Query: 292 cgcgtgcccgatcgagaagatgatgttcatcgggattggcgcctcttggatctgcttcag 351
           ||||||||||||||  | |||||||||||  ||||| |||| ||||||||||||||| ||
Sbjct: 840 cgcgtgcccgatcgccaggatgatgttcagagggatcggcgactcttggatctgcttgag 781

                                                                       
Query: 352 aacggcgtcctcggggacgtacaccctctggaacgtcttgccggtcttcttctcccacag 411
            ||||| ||||| || |||||| ||| | |||||||||||||||||||||||||||||||
Sbjct: 780 cacggcttcctccggcacgtactcccgccggaacgtcttgccggtcttcttctcccacag 721

                                                                       
Query: 412 cgccaccagctcgttgtgcgacagcgtgttggccggcggcttgatgtacagcaccttgtt 471
           || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 cgacagcagctcgttgtgcgacagcgtgttggccggcggcttgatgtacagcaccttgtt 661

                             
Query: 472 ttccgcacgggggtcgtc 489
            ||||| || ||||||||
Sbjct: 660 ctccgcgcgcgggtcgtc 643



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 191 tcgtcgacggtggtgtacttgacgtcagggtacagctcgctcgcctccacccc 243
           ||||||||||||||||||||||| || |||||||| ||||| || ||||||||
Sbjct: 941 tcgtcgacggtggtgtacttgacatccgggtacagttcgctggcgtccacccc 889
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>gb|AY110531.1| Zea mays CL1726_-1 mRNA sequence
          Length = 1315

 Score =  222 bits (112), Expect = 8e-55
 Identities = 163/180 (90%)
 Strand = Plus / Minus

                                                                       
Query: 292 cgcgtgcccgatcgagaagatgatgttcatcgggattggcgcctcttggatctgcttcag 351
           ||||||||||||||  | |||||||||||  ||||| |||| ||||||||||||||| ||
Sbjct: 840 cgcgtgcccgatcgccaggatgatgttcagagggatcggcgactcttggatctgcttgag 781

                                                                       
Query: 352 aacggcgtcctcggggacgtacaccctctggaacgtcttgccggtcttcttctcccacag 411
            ||||| ||||| || |||||| ||| | |||||||||||||||||||||||||||||||
Sbjct: 780 cacggcttcctccggcacgtactcccgccggaacgtcttgccggtcttcttctcccacag 721

                                                                       
Query: 412 cgccaccagctcgttgtgcgacagcgtgttggccggcggcttgatgtacagcaccttgtt 471
           || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 cgacagcagctcgttgtgcgacagcgtgttggccggcggcttgatgtacagcaccttgtt 661



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 191 tcgtcgacggtggtgtacttgacgtcagggtacagctcgct 231
           ||||||||||||||||||||||| || |||||||| |||||
Sbjct: 941 tcgtcgacggtggtgtacttgacatccgggtacagttcgct 901
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>ref|NM_183485.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1207

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 104/122 (85%)
 Strand = Plus / Minus

                                                                       
Query: 313 gatgttcatcgggattggcgcctcttggatctgcttcagaacggcgtcctcggggacgta 372
           |||||||| ||||||   || ||| ||||| ||||| || |||||||||||||| |||||
Sbjct: 857 gatgttcaacgggatctccgactcctggatttgcttgagcacggcgtcctcgggcacgta 798

                                                                       
Query: 373 caccctctggaacgtcttgccggtcttcttctcccacagcgccaccagctcgttgtgcga 432
           ||||||||  | | |||| || ||||||||||||||||||||||||||||| | ||||||
Sbjct: 797 caccctctccagcttcttccccgtcttcttctcccacagcgccaccagctcctcgtgcga 738

             
Query: 433 ca 434
           ||
Sbjct: 737 ca 736



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                            
Query: 168 ttcagaggaacctgttgagcaagtcgtcgacggtggtgtacttgacgtc 216
           ||||||||| |||||||||  |||| |||||||||||||||| ||||||
Sbjct: 999 ttcagaggagcctgttgaggtagtcatcgacggtggtgtactggacgtc 951
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>gb|AY071920.1| Oryza sativa isoflavone reductase-like protein mRNA, complete cds
          Length = 1203

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 104/122 (85%)
 Strand = Plus / Minus

                                                                       
Query: 313 gatgttcatcgggattggcgcctcttggatctgcttcagaacggcgtcctcggggacgta 372
           |||||||| ||||||   || ||| ||||| ||||| || |||||||||||||| |||||
Sbjct: 854 gatgttcaacgggatctccgactcctggatttgcttgagcacggcgtcctcgggcacgta 795

                                                                       
Query: 373 caccctctggaacgtcttgccggtcttcttctcccacagcgccaccagctcgttgtgcga 432
           ||||||||  | | |||| || ||||||||||||||||||||||||||||| | ||||||
Sbjct: 794 caccctctccagcttcttccccgtcttcttctcccacagcgccaccagctcctcgtgcga 735

             
Query: 433 ca 434
           ||
Sbjct: 734 ca 733



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                            
Query: 168 ttcagaggaacctgttgagcaagtcgtcgacggtggtgtacttgacgtc 216
           ||||||||| |||||||||  |||| |||||||||||||||| ||||||
Sbjct: 996 ttcagaggagcctgttgaggtagtcatcgacggtggtgtactggacgtc 948
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>dbj|AK109339.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-E10, full
           insert sequence
          Length = 1206

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 104/122 (85%)
 Strand = Plus / Minus

                                                                       
Query: 313 gatgttcatcgggattggcgcctcttggatctgcttcagaacggcgtcctcggggacgta 372
           |||||||| ||||||   || ||| ||||| ||||| || |||||||||||||| |||||
Sbjct: 856 gatgttcaacgggatctccgactcctggatttgcttgagcacggcgtcctcgggcacgta 797

                                                                       
Query: 373 caccctctggaacgtcttgccggtcttcttctcccacagcgccaccagctcgttgtgcga 432
           ||||||||  | | |||| || ||||||||||||||||||||||||||||| | ||||||
Sbjct: 796 caccctctccagcttcttccccgtcttcttctcccacagcgccaccagctcctcgtgcga 737

             
Query: 433 ca 434
           ||
Sbjct: 736 ca 735



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                            
Query: 168 ttcagaggaacctgttgagcaagtcgtcgacggtggtgtacttgacgtc 216
           ||||||||| |||||||||  |||| |||||||||||||||| ||||||
Sbjct: 998 ttcagaggagcctgttgaggtagtcatcgacggtggtgtactggacgtc 950
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>dbj|AK102701.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103L17, full
           insert sequence
          Length = 1207

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 104/122 (85%)
 Strand = Plus / Minus

                                                                       
Query: 313 gatgttcatcgggattggcgcctcttggatctgcttcagaacggcgtcctcggggacgta 372
           |||||||| ||||||   || ||| ||||| ||||| || |||||||||||||| |||||
Sbjct: 857 gatgttcaacgggatctccgactcctggatttgcttgagcacggcgtcctcgggcacgta 798

                                                                       
Query: 373 caccctctggaacgtcttgccggtcttcttctcccacagcgccaccagctcgttgtgcga 432
           ||||||||  | | |||| || ||||||||||||||||||||||||||||| | ||||||
Sbjct: 797 caccctctccagcttcttccccgtcttcttctcccacagcgccaccagctcctcgtgcga 738

             
Query: 433 ca 434
           ||
Sbjct: 737 ca 736



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                            
Query: 168 ttcagaggaacctgttgagcaagtcgtcgacggtggtgtacttgacgtc 216
           ||||||||| |||||||||  |||| |||||||||||||||| ||||||
Sbjct: 999 ttcagaggagcctgttgaggtagtcatcgacggtggtgtactggacgtc 951
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              complete sequence
          Length = 43261740

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 85/97 (87%)
 Strand = Plus / Plus

                                                                          
Query: 338    tggatctgcttcagaacggcgtcctcggggacgtacaccctctggaacgtcttgccggtc 397
              ||||| ||||| || |||||||||||||| |||||||||||||  | | |||| || |||
Sbjct: 326620 tggatttgcttgagcacggcgtcctcgggcacgtacaccctctccagcttcttccccgtc 326679

                                                   
Query: 398    ttcttctcccacagcgccaccagctcgttgtgcgaca 434
              |||||||||||||||||||||||||| | ||||||||
Sbjct: 326680 ttcttctcccacagcgccaccagctcctcgtgcgaca 326716



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 83/99 (83%)
 Strand = Plus / Plus

                                                                          
Query: 353    acggcgtcctcggggacgtacaccctctggaacgtcttgccggtcttcttctcccacagc 412
              |||||||||||||| |||||||| ||||  | | |||| || ||||||||||||||||  
Sbjct: 322071 acggcgtcctcgggcacgtacactctctccagcttcttccccgtcttcttctcccacatg 322130

                                                     
Query: 413    gccaccagctcgttgtgcgacagcgtgttggccggcggc 451
                ||||||||||| ||||||||  ||||| |||||||||
Sbjct: 322131 ctcaccagctcgtcgtgcgacatggtgttcgccggcggc 322169



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                               
Query: 168    ttcagaggaacctgttgagcaagtcgtcgacggtggtgtacttgacgtc 216
              ||||||||| |||||||||  |||| |||||||||||||||| ||||||
Sbjct: 326336 ttcagaggagcctgttgaggtagtcatcgacggtggtgtactggacgtc 326384
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>dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0005A05
          Length = 190834

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 85/97 (87%)
 Strand = Plus / Plus

                                                                         
Query: 338   tggatctgcttcagaacggcgtcctcggggacgtacaccctctggaacgtcttgccggtc 397
             ||||| ||||| || |||||||||||||| |||||||||||||  | | |||| || |||
Sbjct: 78458 tggatttgcttgagcacggcgtcctcgggcacgtacaccctctccagcttcttccccgtc 78517

                                                  
Query: 398   ttcttctcccacagcgccaccagctcgttgtgcgaca 434
             |||||||||||||||||||||||||| | ||||||||
Sbjct: 78518 ttcttctcccacagcgccaccagctcctcgtgcgaca 78554



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 83/99 (83%)
 Strand = Plus / Plus

                                                                         
Query: 353   acggcgtcctcggggacgtacaccctctggaacgtcttgccggtcttcttctcccacagc 412
             |||||||||||||| |||||||| ||||  | | |||| || ||||||||||||||||  
Sbjct: 73909 acggcgtcctcgggcacgtacactctctccagcttcttccccgtcttcttctcccacatg 73968

                                                    
Query: 413   gccaccagctcgttgtgcgacagcgtgttggccggcggc 451
               ||||||||||| ||||||||  ||||| |||||||||
Sbjct: 73969 ctcaccagctcgtcgtgcgacatggtgttcgccggcggc 74007



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                              
Query: 168   ttcagaggaacctgttgagcaagtcgtcgacggtggtgtacttgacgtc 216
             ||||||||| |||||||||  |||| |||||||||||||||| ||||||
Sbjct: 78174 ttcagaggagcctgttgaggtagtcatcgacggtggtgtactggacgtc 78222
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>gb|AY651065.1| Musa acuminata isoflavone reductase (IFR) mRNA, partial cds
          Length = 550

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                       
Query: 323 gggattggcgcctcttggatctgcttcagaacggcgtcctcggggacgtacaccctctgg 382
           ||||||||||||||||||||||||||||| ||  | ||||| |||||||| ||||||| |
Sbjct: 434 gggattggcgcctcttggatctgcttcaggacttcttcctccgggacgtagaccctctcg 375

                                     
Query: 383 aacgtcttgccggtcttcttctccca 408
           || |||||||||  ||||||||||||
Sbjct: 374 aaggtcttgccgaccttcttctccca 349



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                       
Query: 207 acttgacgtcagggtacagctcgctcgcctccaccccgaacgacggcgcgatctcgatgt 266
           |||||||||||||| ||||| |  | |||||||| ||||| || ||| ||||||||| ||
Sbjct: 550 acttgacgtcagggaacagcgccgtggcctccacgccgaaagatggctcgatctcgaagt 491

                           
Query: 267 tggtctggtcgccctt 282
           |||| ||||| |||||
Sbjct: 490 tggtgtggtcaccctt 475
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>ref|NM_183484.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1256

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 83/99 (83%)
 Strand = Plus / Minus

                                                                       
Query: 353 acggcgtcctcggggacgtacaccctctggaacgtcttgccggtcttcttctcccacagc 412
           |||||||||||||| |||||||| ||||  | | |||| || ||||||||||||||||  
Sbjct: 838 acggcgtcctcgggcacgtacactctctccagcttcttccccgtcttcttctcccacatg 779

                                                  
Query: 413 gccaccagctcgttgtgcgacagcgtgttggccggcggc 451
             ||||||||||| ||||||||  ||||| |||||||||
Sbjct: 778 ctcaccagctcgtcgtgcgacatggtgttcgccggcggc 740
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>dbj|AK119550.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-E04, full
           insert sequence
          Length = 1265

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 83/99 (83%)
 Strand = Plus / Minus

                                                                       
Query: 353 acggcgtcctcggggacgtacaccctctggaacgtcttgccggtcttcttctcccacagc 412
           |||||||||||||| |||||||| ||||  | | |||| || ||||||||||||||||  
Sbjct: 842 acggcgtcctcgggcacgtacactctctccagcttcttccccgtcttcttctcccacatg 783

                                                  
Query: 413 gccaccagctcgttgtgcgacagcgtgttggccggcggc 451
             ||||||||||| ||||||||  ||||| |||||||||
Sbjct: 782 ctcaccagctcgtcgtgcgacatggtgttcgccggcggc 744
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>dbj|AK104735.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D01, full
           insert sequence
          Length = 1260

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 83/99 (83%)
 Strand = Plus / Minus

                                                                       
Query: 353 acggcgtcctcggggacgtacaccctctggaacgtcttgccggtcttcttctcccacagc 412
           |||||||||||||| |||||||| ||||  | | |||| || ||||||||||||||||  
Sbjct: 842 acggcgtcctcgggcacgtacactctctccagcttcttccccgtcttcttctcccacatg 783

                                                  
Query: 413 gccaccagctcgttgtgcgacagcgtgttggccggcggc 451
             ||||||||||| ||||||||  ||||| |||||||||
Sbjct: 782 ctcaccagctcgtcgtgcgacatggtgttcgccggcggc 744
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>dbj|AK104669.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-312-B02, full
           insert sequence
          Length = 1256

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 83/99 (83%)
 Strand = Plus / Minus

                                                                       
Query: 353 acggcgtcctcggggacgtacaccctctggaacgtcttgccggtcttcttctcccacagc 412
           |||||||||||||| |||||||| ||||  | | |||| || ||||||||||||||||  
Sbjct: 838 acggcgtcctcgggcacgtacactctctccagcttcttccccgtcttcttctcccacatg 779

                                                  
Query: 413 gccaccagctcgttgtgcgacagcgtgttggccggcggc 451
             ||||||||||| ||||||||  ||||| |||||||||
Sbjct: 778 ctcaccagctcgtcgtgcgacatggtgttcgccggcggc 740
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>dbj|AK104238.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-H12, full
           insert sequence
          Length = 1260

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 83/99 (83%)
 Strand = Plus / Minus

                                                                       
Query: 353 acggcgtcctcggggacgtacaccctctggaacgtcttgccggtcttcttctcccacagc 412
           |||||||||||||| |||||||| ||||  | | |||| || ||||||||||||||||  
Sbjct: 842 acggcgtcctcgggcacgtacactctctccagcttcttccccgtcttcttctcccacatg 783

                                                  
Query: 413 gccaccagctcgttgtgcgacagcgtgttggccggcggc 451
             ||||||||||| ||||||||  ||||| |||||||||
Sbjct: 782 ctcaccagctcgtcgtgcgacatggtgttcgccggcggc 744
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>dbj|AK104189.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-C06, full
           insert sequence
          Length = 1259

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 83/99 (83%)
 Strand = Plus / Minus

                                                                       
Query: 353 acggcgtcctcggggacgtacaccctctggaacgtcttgccggtcttcttctcccacagc 412
           |||||||||||||| |||||||| ||||  | | |||| || ||||||||||||||||  
Sbjct: 842 acggcgtcctcgggcacgtacactctctccagcttcttccccgtcttcttctcccacatg 783

                                                  
Query: 413 gccaccagctcgttgtgcgacagcgtgttggccggcggc 451
             ||||||||||| ||||||||  ||||| |||||||||
Sbjct: 782 ctcaccagctcgtcgtgcgacatggtgttcgccggcggc 744
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>dbj|AK098946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045H04, full
           insert sequence
          Length = 1256

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 83/99 (83%)
 Strand = Plus / Minus

                                                                       
Query: 353 acggcgtcctcggggacgtacaccctctggaacgtcttgccggtcttcttctcccacagc 412
           |||||||||||||| |||||||| ||||  | | |||| || ||||||||||||||||  
Sbjct: 854 acggcgtcctcgggcacgtacactctctccagcttcttccccgtcttcttctcccacatg 795

                                                  
Query: 413 gccaccagctcgttgtgcgacagcgtgttggccggcggc 451
             ||||||||||| ||||||||  ||||| |||||||||
Sbjct: 794 ctcaccagctcgtcgtgcgacatggtgttcgccggcggc 756
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>dbj|AK061325.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-G05, full
           insert sequence
          Length = 1265

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 83/99 (83%)
 Strand = Plus / Minus

                                                                       
Query: 353 acggcgtcctcggggacgtacaccctctggaacgtcttgccggtcttcttctcccacagc 412
           |||||||||||||| |||||||| ||||  | | |||| || ||||||||||||||||  
Sbjct: 842 acggcgtcctcgggcacgtacactctctccagcttcttccccgtcttcttctcccacatg 783

                                                  
Query: 413 gccaccagctcgttgtgcgacagcgtgttggccggcggc 451
             ||||||||||| ||||||||  ||||| |||||||||
Sbjct: 782 ctcaccagctcgtcgtgcgacatggtgttcgccggcggc 744
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>gb|AY837829.1| Linum usitatissimum putative phenylcoumaran benzylic ether
           reductase mRNA, partial cds
          Length = 625

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                       
Query: 200 gtggtgtacttgacgtcagggtacagctcgctcgcctccaccccgaacgacggcgcgatc 259
           ||||||||||| || |||||||| |||||   ||||||  |||||||||||||| |||||
Sbjct: 451 gtggtgtacttaacatcagggtaaagctcagacgcctctgccccgaacgacggctcgatc 392

                         
Query: 260 tcgatgttggtctg 273
           |||| || ||||||
Sbjct: 391 tcgaagtaggtctg 378
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>gb|AF242490.2|AF242490 Pinus taeda phenylcoumaran benzylic ether reductase PT1 mRNA,
           complete cds
          Length = 1204

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 191 tcgtcgacggtggtgtacttgacgtcagggtacagct 227
           ||||||||||||||||| || || |||||||||||||
Sbjct: 927 tcgtcgacggtggtgtatttcacatcagggtacagct 891
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>gb|AF081678.1|AF081678 Pinus taeda phenylcoumaran benzylic ether reductase (DDCBER1) mRNA,
           complete cds
          Length = 1204

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 191 tcgtcgacggtggtgtacttgacgtcagggtacagct 227
           ||||||||||||||||| || || |||||||||||||
Sbjct: 927 tcgtcgacggtggtgtatttcacatcagggtacagct 891
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>gb|AC126029.3| Mus musculus BAC clone RP23-389K5 from chromosome 19, complete sequence
          Length = 212472

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 81     aaaccaacaaaagtaaccagcag 103
              |||||||||||||||||||||||
Sbjct: 203122 aaaccaacaaaagtaaccagcag 203100
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>gb|AC122861.4| Mus musculus BAC clone RP23-140G16 from 19, complete sequence
          Length = 205150

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 81     aaaccaacaaaagtaaccagcag 103
              |||||||||||||||||||||||
Sbjct: 175359 aaaccaacaaaagtaaccagcag 175381
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>emb|BX649345.16| Zebrafish DNA sequence from clone DKEY-161F11 in linkage group 11,
              complete sequence
          Length = 138432

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 17     attgcttaaagcaaaacataca 38
              ||||||||||||||||||||||
Sbjct: 108043 attgcttaaagcaaaacataca 108022
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>emb|AL031274.1|HS798A17 Human DNA sequence from clone RP4-798A17 on chromosome 1q24 Contains
             the 3' end of the FMO1 gene for flavin containing
             monooxygenase 1, a high-mobility group box 1 (HMGB1)
             pseudogene, the FMO4 gene for flavin containing
             monooxygenase 4, the TOP1P1 gene for topoisomerase (DNA) I
             pseudogene 1 and a signal recognition particle 14kDa
             (homologous Alu RNA binding protein) (SRP14) pseudogene,
             complete sequence
          Length = 130467

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 39    gtggtcccaagttatttgttc 59
             |||||||||||||||||||||
Sbjct: 96450 gtggtcccaagttatttgttc 96470
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>emb|BX293568.7| Zebrafish DNA sequence from clone CH211-215F13 in linkage group 20,
             complete sequence
          Length = 221849

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    atacagtggtcccaagttatt 54
             |||||||||||||||||||||
Sbjct: 90353 atacagtggtcccaagttatt 90333
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>emb|AM113472.1| Micromonospora sp. ML1 thiocoraline gene cluster
          Length = 64650

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 185  agcaagtcgtcgacggtggtgtact 209
            |||| ||||||||||||||||||||
Sbjct: 4503 agcatgtcgtcgacggtggtgtact 4527
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>gb|AC121523.6| Mus musculus chromosome 18, clone RP24-92N23, complete sequence
          Length = 202346

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    aacatacagtggtcccaagt 50
             ||||||||||||||||||||
Sbjct: 29850 aacatacagtggtcccaagt 29831
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>emb|BX927158.14| Zebrafish DNA sequence from clone DKEY-106K1 in linkage group 5,
             complete sequence
          Length = 144909

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    acagtggtcccaagttattt 55
             ||||||||||||||||||||
Sbjct: 29708 acagtggtcccaagttattt 29689
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 242     ccgaacgacggcgcgatctcgatg 265
               ||||||||||||||| ||||||||
Sbjct: 2910380 ccgaacgacggcgcgttctcgatg 2910357
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>gb|AC161177.4| Mus musculus chromosome 18, clone RP24-131H12, complete sequence
          Length = 189231

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    aacatacagtggtcccaagt 50
             ||||||||||||||||||||
Sbjct: 83677 aacatacagtggtcccaagt 83658
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>ref|XM_310909.2| Anopheles gambiae str. PEST ENSANGP00000012709 (ENSANGG00000010220),
            partial mRNA
          Length = 2439

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 297  gcccgatcgagaagatgatg 316
            ||||||||||||||||||||
Sbjct: 1828 gcccgatcgagaagatgatg 1809


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,404,096
Number of Sequences: 3902068
Number of extensions: 3404096
Number of successful extensions: 63944
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63811
Number of HSP's gapped (non-prelim): 123
length of query: 493
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 471
effective length of database: 17,147,199,772
effective search space: 8076331092612
effective search space used: 8076331092612
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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