>RET_HUMAN (P07949) Proto-oncogene tyrosine-protein kinase receptor ret|
           precursor (EC 2.7.10.1) (C-ret)
          Length = 1114

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 112 TTCNHMTYTCSSSHCDLHPASKIRLQPKEC 201
           +TC+  T TC   HCD+     I + P++C
Sbjct: 556 STCSPSTKTCPDGHCDVVETQDINICPQDC 585

>PMT2_SCHPO (O42832) AdoMet-dependent rRNA methyltransferase pmt2 (EC 2.1.1.-)|
           (2'-O-ribose RNA methyltransferase)
           (S-adenosyl-L-methionine-dependent methyltransferase)
          Length = 802

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = -3

Query: 125 WLQVVERCC*PGITSVAPQLAALLLTVNCWWF-KEFSDDAC 6
           WLQV  + C PG   V   LA +    NC  F ++ + D C
Sbjct: 59  WLQVASKTCKPGSLIVGVDLAPIKPIPNCHTFVEDITSDKC 99

>RET_MOUSE (P35546) Proto-oncogene tyrosine-protein kinase receptor ret|
           precursor (EC 2.7.10.1) (C-ret)
          Length = 1115

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 112 TTCNHMTYTCSSSHCDLHPASKIRLQPKEC 201
           +TC+  T TC   HCD   +    + P++C
Sbjct: 558 STCSPSTRTCPDGHCDAVESRDANICPQDC 587


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,094,339
Number of Sequences: 219361
Number of extensions: 653325
Number of successful extensions: 1359
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1359
length of database: 80,573,946
effective HSP length: 61
effective length of database: 67,192,925
effective search space used: 1612630200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)