Clone Name | rbart57a09 |
---|---|
Clone Library Name | barley_pub |
>5NG4_PINTA (Q6J163) Auxin-induced protein 5NG4| Length = 410 Score = 43.9 bits (102), Expect = 2e-04 Identities = 20/38 (52%), Positives = 27/38 (71%) Frame = -3 Query: 490 IISSFVLGETVSLGSIIAGVLLIGGLYNVLWGKSMERK 377 I++S +LGE LG I +L+I GLY VLWGKS E++ Sbjct: 308 IMASIILGEQFYLGGIFGAILIIIGLYLVLWGKSEEKR 345
>TCFL5_HUMAN (Q9UL49) Transcription factor-like 5 protein (Cha transcription| factor) (HPV-16 E2-binding protein 1) (E2BP-1) Length = 452 Score = 31.6 bits (70), Expect = 1.2 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Frame = -2 Query: 440 CWGATDWRPVQRTVGEKHG--EKRRYEQDGWRQTCHGAARQGAAPSAG*CGGKGLSQASD 267 C G D++ ++ + + G EK DG R GAA++GA +A G G +A Sbjct: 72 CLGHIDFQELRMMLLSEAGAAEKTSGGGDGARARADGAAKEGAGAAAAAAGPDGAPEARA 131 Query: 266 RPAM 255 +PA+ Sbjct: 132 KPAV 135
>HIS3_NITWN (Q3ST00) Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) (PRA-CH)| Length = 145 Score = 31.6 bits (70), Expect = 1.2 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = +1 Query: 34 TTSTGEVWYYLKGNHALWLRAES 102 T TG+ WYY + ALW + ES Sbjct: 52 TVETGDAWYYSRSRKALWRKGES 74
>HIS3_BRAJA (Q89IW3) Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) (PRA-CH)| Length = 140 Score = 30.8 bits (68), Expect = 2.1 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = +1 Query: 34 TTSTGEVWYYLKGNHALWLRAES 102 T +TGE WY+ + +ALW + E+ Sbjct: 50 TIATGEAWYFSRSRNALWRKGET 72
>NUDF_EMENI (Q00664) Nuclear migration protein nudF| Length = 444 Score = 30.4 bits (67), Expect = 2.8 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 6/60 (10%) Frame = +3 Query: 165 LQFRVSRSACAAFQHSPEPVVWL*----TQSFLSHRRPITCLA--QTFAAASSGTWGCSL 326 LQ + S AA + +P WL T + SHR +TC+A F + +SG+ C++ Sbjct: 79 LQAELEASPSAARAKNQDPTNWLPKPSSTHTLTSHRDAVTCVAFHPVFTSLASGSEDCTI 138
>STCC_EMENI (Q00668) Putative sterigmatocystin biosynthesis peroxidase stcC| precursor (EC 1.11.-.-) Length = 311 Score = 30.0 bits (66), Expect = 3.6 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Frame = -1 Query: 399 GGKAWREKTIRTRWVATNLPWSC-KTRSSPKCRMMR-RQRSEPSK*SAGDG 253 GG A ++++ +RW A + W C RSS CR R +S P G G Sbjct: 222 GGSAREKRSVGSRWPAMSFSWRCAPQRSSLACRSTSVRLQSRPLTRCHGSG 272
>OTC_ARATH (O50039) Ornithine carbamoyltransferase, chloroplast precursor (EC| 2.1.3.3) (OTCase) (Ornithine transcarbamylase) Length = 375 Score = 29.3 bits (64), Expect = 6.2 Identities = 18/37 (48%), Positives = 20/37 (54%) Frame = +3 Query: 357 PILFVSSFLSMLFPHSTLYRPPISSTPAIILPRLTVS 467 P L SS S FP +TL R S P+ LPRL VS Sbjct: 15 PALSFSSSSSSFFPGTTLRRFSAVSLPSPALPRLRVS 51
>HIS3_RHOPA (P60544) Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) (PRA-CH)| Length = 151 Score = 29.3 bits (64), Expect = 6.2 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = +1 Query: 34 TTSTGEVWYYLKGNHALWLRAES 102 T TGE WYY + LW + E+ Sbjct: 59 TIQTGEAWYYSRSRKRLWKKGET 81
>VHT1_YEAST (P53241) Vitamin H transporter (H+/biotin symporter)| Length = 593 Score = 28.9 bits (63), Expect = 8.1 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = +1 Query: 28 FDTTSTGEVWYYLKGNHALWLRAESRYSNGALPILSSWVACI 153 FDT S + Y G++ LWL++ ++YS + LS AC+ Sbjct: 374 FDTCSWNNMTAY-SGSYTLWLKSNTKYSIAQVNNLSVIPACL 414
>STXB4_HUMAN (Q6ZWJ1) Syntaxin-binding protein 4 (Syntaxin 4-interacting| protein) (Synip) Length = 553 Score = 28.9 bits (63), Expect = 8.1 Identities = 18/57 (31%), Positives = 30/57 (52%) Frame = +3 Query: 321 SLSCSSMAGLSPPILFVSSFLSMLFPHSTLYRPPISSTPAIILPRLTVSPKTNEDMM 491 +LSC+S+ S +S LS+ SS P I++P+ + +PKTN D++ Sbjct: 117 NLSCTSLIEASGEYGPQASTLSLF-----------SSPPEILIPKTSSTPKTNNDIL 162 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,927,664 Number of Sequences: 219361 Number of extensions: 1515080 Number of successful extensions: 4528 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 4351 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4528 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3581144924 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)