ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart57a01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|U01963.1|HVU01963 Hordeum vulgare CM 72 germin subunit mRNA, ... 676 0.0
2gb|M21962.1|WHTGAMINA Triticum aestivum germin protein precursor... 309 4e-81
3gb|M63223.1|WHTGERMIN Wheat germin 9f-2.8 gene, complete cds 309 4e-81
4gb|M63224.1|WHTGERMINA Wheat germin 9f-3.8 gene, complete cds 262 8e-67
5emb|Y09917.1|TAPSBGER3 T.aestivum mRNA for germin-like protein 3 216 4e-53
6emb|Y09916.1|TAPSBGER2 T.aestivum mRNA for germin-like protein 2... 165 1e-37
7emb|AJ492381.1|LPE492381 Lolium perenne mRNA for oxalate oxidase... 139 8e-30
8emb|Y14203.1|HVY14203 Hordeum vulgare mRNA for oxalate oxidase (... 135 1e-28
9emb|Y09918.1|TAPSBGER4 T.aestivum mRNA for germin-like protein 4... 135 1e-28
10emb|AJ492380.1|LPE492380 Lolium perenne mRNA for oxalate oxidase... 131 2e-27
11emb|AJ556991.1|TAE556991 Triticum aestivum mRNA for oxalate oxid... 127 3e-26
12gb|L15737.1|BLYGERMIN Barley germin mRNA, partial cds 125 1e-25
13emb|AJ504848.1|LPE504848 Lolium perenne mRNA for oxalate oxidase... 105 1e-19
14emb|AJ291825.1|LPE291825 Lolium perenne mRNA for oxalate oxidase... 94 4e-16
15ref|XM_469349.1| Oryza sativa (japonica cultivar-group), mRNA 88 3e-14
16gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 88 3e-14
17dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
18gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genom... 88 3e-14
19gb|AF261942.1|AF261942 Zea mays clone AW042316 germin-like prote... 88 3e-14
20dbj|AK103716.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 3e-14
21gb|AY108860.1| Zea mays PCO074541 mRNA sequence 88 3e-14
22emb|Y09915.1|TAPSBGER1 T.aestivum mRNA for germin-like protein 1 84 4e-13
23ref|XM_469352.1| Oryza sativa (japonica cultivar-group), mRNA 60 6e-06
24ref|XM_469351.1| Oryza sativa (japonica cultivar-group), mRNA 60 6e-06
25dbj|AK059872.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
26ref|XM_469350.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.006
27emb|BX323560.16| Zebrafish DNA sequence from clone DKEY-265E15 i... 44 0.36
28gb|AC112926.7| Mus musculus chromosome 3, clone RP23-215M7, comp... 42 1.4
29gb|AC147010.31| Medicago truncatula clone mth2-145p5, complete s... 42 1.4
30gb|AC068984.15| Homo sapiens 3 BAC RP11-549K5 (Roswell Park Canc... 42 1.4
31gb|AC158464.2| Medicago truncatula chromosome 2 BAC clone mth2-1... 42 1.4
32dbj|AB210620.1| Ciona intestinalis mRNA for p38 kinase, complete... 42 1.4
33dbj|AK173857.1| Ciona intestinalis cDNA, clone:cicl006g22, full ... 42 1.4
34gb|AF217490.1|AF217491S3 Homo sapiens fragile 16D oxido reductas... 40 5.6
35gb|AC138359.8| Mus musculus chromosome 1, clone RP24-383H12, com... 40 5.6
36gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 40 5.6
37emb|CR932600.1|CNS0KYBV Paramecium tetraurelia, Small GTPase rab... 40 5.6
38gb|AC122814.3| Mus musculus BAC clone RP23-234A12 from 6, comple... 40 5.6
39gb|AC004456.1| Homo sapiens PAC clone RP5-1100F23 from 7, comple... 40 5.6
40emb|AL445189.7| Human DNA sequence from clone RP11-249L21 on chr... 40 5.6
41emb|AL390208.17| Human DNA sequence from clone RP11-787I22 on ch... 40 5.6
42emb|AL135790.7| Human DNA sequence from clone RP11-87N24 on chro... 40 5.6
43emb|AL133393.16| Human DNA sequence from clone RP1-21P18 on chro... 40 5.6
44emb|X87369.1|CPNANH C.perfringens nanH gene & ORF1,2,3 & 4 40 5.6
45gb|AC103749.2| Homo sapiens chromosome 15, clone RP11-4F5, compl... 40 5.6
46gb|AF012825.2| Ectromelia virus strain Moscow, complete genome 40 5.6
47gb|AC110788.3| Homo sapiens BAC clone RP11-473D24 from 4, comple... 40 5.6
48emb|BX322623.7| Zebrafish DNA sequence from clone CH211-256I14 i... 40 5.6
49emb|BX649257.8| Zebrafish DNA sequence from clone CH211-197L9 in... 40 5.6
50gb|AC117832.6| Homo sapiens chromosome 15, clone RP11-963M5, com... 40 5.6
51gb|AC110073.3| Homo sapiens BAC clone RP11-62A4 from 4, complete... 40 5.6
52gb|AC008276.4| Homo sapiens BAC clone RP11-297I3 from 2, complet... 40 5.6
53gb|AC137643.3| Homo sapiens chromosome 16 clone RP11-95H3, compl... 40 5.6
54emb|BX294386.5| Zebrafish DNA sequence from clone CH211-207B9 in... 40 5.6
55gb|AC009141.7| Homo sapiens chromosome 16 clone RP11-543G23, com... 40 5.6
56dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete ge... 40 5.6
57emb|BX469936.11| Zebrafish DNA sequence from clone DKEY-32I12 in... 40 5.6
58gb|AC123676.9| Mus musculus chromosome 1, clone RP23-275F9, comp... 40 5.6
59gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 5.6
60gb|DQ066531.1| Raccoonpox virus isolate rcn-85a DNA polymerase g... 40 5.6
61gb|AC171501.2| Mus musculus BAC clone RP23-255N3 from chromosome... 40 5.6
62emb|AL672008.8| Mouse DNA sequence from clone RP23-389M3 on chro... 40 5.6 
>gb|U01963.1|HVU01963 Hordeum vulgare CM 72 germin subunit mRNA, complete cds
          Length = 1006

 Score =  676 bits (341), Expect = 0.0
 Identities = 341/341 (100%)
 Strand = Plus / Minus

                                                                       
Query: 81  tgcaaaatgcaaactatattttttgacaaagatggcaataaaaggtagtacattcaattc 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 998 tgcaaaatgcaaactatattttttgacaaagatggcaataaaaggtagtacattcaattc 939

                                                                       
Query: 141 ctcgtattggttctgaagattaaaccatgaggctaacttattcaatttattacaactgca 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 938 ctcgtattggttctgaagattaaaccatgaggctaacttattcaatttattacaactgca 879

                                                                       
Query: 201 tgcgagattaaccggaagcttgaatacatgtcttctgctgagaatcattaaattttgcta 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 tgcgagattaaccggaagcttgaatacatgtcttctgctgagaatcattaaattttgcta 819

                                                                       
Query: 261 ccatgcatatacagaattatgcattgattatttaaggaaggctcccaggaattaaaaccc 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 ccatgcatatacagaattatgcattgattatttaaggaaggctcccaggaattaaaaccc 759

                                                                       
Query: 321 agcggcgaacttggacttgagaagttccacgacccctgcctccacccggagcgccttggt 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 agcggcgaacttggacttgagaagttccacgacccctgcctccacccggagcgccttggt 699

                                                    
Query: 381 gagcaccggcgtcgggataggcgggtttgagccgaagagcg 421
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 gagcaccggcgtcgggataggcgggtttgagccgaagagcg 658
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>gb|M21962.1|WHTGAMINA Triticum aestivum germin protein precursor, mRNA, complete cds
          Length = 1012

 Score =  309 bits (156), Expect = 4e-81
 Identities = 285/324 (87%), Gaps = 8/324 (2%)
 Strand = Plus / Minus

                                                                       
Query: 106 acaaagatggcaataaaaggtagtacattcaattcctcgtattggttctga----agatt 161
           ||||||| | |||||||| ||||||||||||||||||| ||||||||||||    ||  |
Sbjct: 974 acaaagacgacaataaaaagtagtacattcaattcctcatattggttctgatcgaaggct 915

                                                                       
Query: 162 aaaccatgaggctaacttattcaat-ttattaca--actgcatgcgagattaaccggaag 218
           | |||||||||||||||| |||||| ||||||||  ||| ||||||||||||||| ||| 
Sbjct: 914 acaccatgaggctaacttgttcaatcttattacacgactacatgcgagattaacctgaaa 855

                                                                       
Query: 219 cttgaatacatgtcttctgctgagaatcattaaattttgctaccatgcatatacagaatt 278
           ||||||||||||||||||| ||||||| |||||||||||||| ||||||||||  |||||
Sbjct: 854 cttgaatacatgtcttctggtgagaattattaaattttgctagcatgcatatatggaatt 795

                                                                       
Query: 279 atgcattgattattt-aaggaaggctcccaggaattaaaacccagcggcgaacttggact 337
           ||  | | || |||| | |||||||||| || ||||||||||||||||| ||||||||||
Sbjct: 794 atataattatcatttcagggaaggctcctagaaattaaaacccagcggcaaacttggact 735

                                                                       
Query: 338 tgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggcgtcggga 397
           ||||||||||||||||||  |||||||||||||| |||||||||||||||||||| ||||
Sbjct: 734 tgagaagttccacgaccctggcctccacccggagtgccttggtgagcaccggcgttggga 675

                                   
Query: 398 taggcgggtttgagccgaagagcg 421
           | |||||||| |||||||||||||
Sbjct: 674 tgggcgggttggagccgaagagcg 651
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>gb|M63223.1|WHTGERMIN Wheat germin 9f-2.8 gene, complete cds
          Length = 2822

 Score =  309 bits (156), Expect = 4e-81
 Identities = 285/324 (87%), Gaps = 8/324 (2%)
 Strand = Plus / Minus

                                                                        
Query: 106  acaaagatggcaataaaaggtagtacattcaattcctcgtattggttctga----agatt 161
            ||||||| | |||||||| ||||||||||||||||||| ||||||||||||    ||  |
Sbjct: 2687 acaaagacgacaataaaaagtagtacattcaattcctcatattggttctgatcgaaggct 2628

                                                                        
Query: 162  aaaccatgaggctaacttattcaat-ttattaca--actgcatgcgagattaaccggaag 218
            | |||||||||||||||| |||||| ||||||||  ||| ||||||||||||||| ||| 
Sbjct: 2627 acaccatgaggctaacttgttcaatcttattacacgactacatgcgagattaacctgaaa 2568

                                                                        
Query: 219  cttgaatacatgtcttctgctgagaatcattaaattttgctaccatgcatatacagaatt 278
            ||||||||||||||||||| ||||||| |||||||||||||| ||||||||||  |||||
Sbjct: 2567 cttgaatacatgtcttctggtgagaattattaaattttgctagcatgcatatatggaatt 2508

                                                                        
Query: 279  atgcattgattattt-aaggaaggctcccaggaattaaaacccagcggcgaacttggact 337
            ||  | | || |||| | |||||||||| || ||||||||||||||||| ||||||||||
Sbjct: 2507 atataattatcatttcagggaaggctcctagaaattaaaacccagcggcaaacttggact 2448

                                                                        
Query: 338  tgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggcgtcggga 397
            ||||||||||||||||||  |||||||||||||| |||||||||||||||||||| ||||
Sbjct: 2447 tgagaagttccacgaccctggcctccacccggagtgccttggtgagcaccggcgttggga 2388

                                    
Query: 398  taggcgggtttgagccgaagagcg 421
            | |||||||| |||||||||||||
Sbjct: 2387 tgggcgggttggagccgaagagcg 2364



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                               
Query: 30   acgtaaactttggaacatgtttgacttacaaatggtaattggacaaatata 80
            ||||||||| | |||||||||||||||| ||| |||||| |||||||||||
Sbjct: 2775 acgtaaactatagaacatgtttgacttataaaaggtaatcggacaaatata 2725
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>gb|M63224.1|WHTGERMINA Wheat germin 9f-3.8 gene, complete cds
          Length = 3761

 Score =  262 bits (132), Expect = 8e-67
 Identities = 268/308 (87%), Gaps = 4/308 (1%)
 Strand = Plus / Minus

                                                                        
Query: 117  aataaaaggtagtacatt-caattcctcgtattggttctgaagattaaaccatgaggcta 175
            ||||||| | |||||||| |||||| |||||||||||| ||||  | |||   |||| ||
Sbjct: 2189 aataaaaagcagtacatttcaattcatcgtattggttccgaaggctgaactgcgaggtta 2130

                                                                        
Query: 176  acttattcaat-ttattacaactgcatgcgagattaaccggaagcttgaatacatgtctt 234
            ||||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||
Sbjct: 2129 acttattcaatcttattacaactgcatg-gagcttaaccagaagcttgaatacatgtctt 2071

                                                                        
Query: 235  ctgctgagaatcattaaattttgctaccatgcatatacagaattatgcattgattattta 294
            |||  |||||||||||| |||||||| ||||||||||  |||||||  |||||| |||| 
Sbjct: 2070 ctgtggagaatcattaatttttgctagcatgcatatatcgaattatatattgatcatttc 2011

                                                                        
Query: 295  aggaa-ggctcccaggaattaaaacccagcggcgaacttggacttgagaagttccacgac 353
            |||   |||||||||||||||| ||||| | ||||||||||| |||||||||||||||||
Sbjct: 2010 agggctggctcccaggaattaagacccaccagcgaacttggatttgagaagttccacgac 1951

                                                                        
Query: 354  ccctgcctccacccggagcgccttggtgagcaccggcgtcgggataggcgggtttgagcc 413
            ||| |||||||||||||| |||||||||||||||||  | ||||| |||||||| |||||
Sbjct: 1950 cccagcctccacccggagagccttggtgagcaccggtttggggatgggcgggttggagcc 1891

                    
Query: 414  gaagagcg 421
            ||||||||
Sbjct: 1890 gaagagcg 1883
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>emb|Y09917.1|TAPSBGER3 T.aestivum mRNA for germin-like protein 3
          Length = 1027

 Score =  216 bits (109), Expect = 4e-53
 Identities = 201/229 (87%), Gaps = 2/229 (0%)
 Strand = Plus / Minus

                                                                       
Query: 191 tacaactgcatgcgagattaaccggaagcttgaatacatgtcttctgctgagaatcatta 250
           |||||||||||| ||| |||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 855 tacaactgcatg-gagcttaaccagaagcttgaatacatgtcttctgcagagaatcatta 797

                                                                       
Query: 251 aattttgctaccatgcatatacagaattatgcattgattatttaaggaa-ggctcccagg 309
           ||||| || | ||||||||||  |||||||  |||||| |||| |||   ||||||||||
Sbjct: 796 aatttcgccagcatgcatatatcgaattatatattgatcatttcagggctggctcccagg 737

                                                                       
Query: 310 aattaaaacccagcggcgaacttggacttgagaagttccacgacccctgcctccacccgg 369
           |||||| ||||| | ||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 736 aattaagacccaccagcgaagttggatttgagaagttccacgaccccagcctccacccgg 677

                                                            
Query: 370 agcgccttggtgagcaccggcgtcgggataggcgggtttgagccgaaga 418
           || ||||||||||||||||| || ||||| |||||||| || |||||||
Sbjct: 676 agagccttggtgagcaccggtgtggggatgggcgggttggatccgaaga 628
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>emb|Y09916.1|TAPSBGER2 T.aestivum mRNA for germin-like protein 2, partial
          Length = 764

 Score =  165 bits (83), Expect = 1e-37
 Identities = 104/111 (93%)
 Strand = Plus / Minus

                                                                       
Query: 310 aattaaaacccagcggcgaacttggacttgagaagttccacgacccctgcctccacccgg 369
           |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 508 aattaaaacccagcggcgaacttggacttgagtagttccacgaccccggcctccacccgg 449

                                                              
Query: 370 agcgccttggtgagcaccggcgtcgggataggcgggtttgagccgaagagc 420
           ||||||||||||||||||||||| ||||| || || || ||||||||||||
Sbjct: 448 agcgccttggtgagcaccggcgttgggatgggtggattggagccgaagagc 398



 Score =  137 bits (69), Expect = 3e-29
 Identities = 147/169 (86%), Gaps = 3/169 (1%)
 Strand = Plus / Minus

                                                                       
Query: 106 acaaagatggcaataaaaggtagtacattcaattcctcgtattggttctgaagattaaac 165
           ||||||| | |||||||| | ||||||| ||||||| | |||||| |||||||  | |||
Sbjct: 701 acaaagacgacaataaaaagaagtacatacaattccccatattggatctgaaggcttaac 642

                                                                       
Query: 166 catgaggctaacttattcaat-ttattacaactgcatgcgagattaaccggaagcttgaa 224
           |||| |||||||||||||||| ||||||||| ||||||||||||||||| | ||||||| 
Sbjct: 641 catggggctaacttattcaatcttattacaattgcatgcgagattaacccggagcttgag 582

                                                            
Query: 225 tacatgtcttctgctg-agaatcattaaa-ttttgctaccatgcatata 271
           |||||||||| ||||| ||||| |||||| |||||||| ||||||||||
Sbjct: 581 tacatgtcttttgctgaagaattattaaatttttgctagcatgcatata 533
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>emb|AJ492381.1|LPE492381 Lolium perenne mRNA for oxalate oxidase 4 (oxO4 gene)
          Length = 828

 Score =  139 bits (70), Expect = 8e-30
 Identities = 97/106 (91%)
 Strand = Plus / Minus

                                                                       
Query: 313 taaaacccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggagc 372
           |||||||| ||||| ||||||||||||||||||||||||||||| || ||||| ||||||
Sbjct: 671 taaaaccctgcggcaaacttggacttgagaagttccacgaccccagcatccacacggagc 612

                                                         
Query: 373 gccttggtgagcaccggcgtcgggataggcgggtttgagccgaaga 418
           |||||||||||||||||||||||||| || ||||| || |||||||
Sbjct: 611 gccttggtgagcaccggcgtcgggatcggtgggttggaaccgaaga 566
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>emb|Y14203.1|HVY14203 Hordeum vulgare mRNA for oxalate oxidase (HvOxOa)
          Length = 970

 Score =  135 bits (68), Expect = 1e-28
 Identities = 98/108 (90%)
 Strand = Plus / Minus

                                                                       
Query: 312 ttaaaacccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggag 371
           |||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 767 ttaagacccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaag 708

                                                           
Query: 372 cgccttggtgagcaccggcgtcgggataggcgggtttgagccgaagag 419
            ||||||||||||||||| || ||||| |||||||| || ||||||||
Sbjct: 707 agccttggtgagcaccggtgtggggatgggcgggttggaaccgaagag 660
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>emb|Y09918.1|TAPSBGER4 T.aestivum mRNA for germin-like protein 4, partial
          Length = 572

 Score =  135 bits (68), Expect = 1e-28
 Identities = 107/120 (89%)
 Strand = Plus / Minus

                                                                       
Query: 301 gctcccaggaattaaaacccagcggcgaacttggacttgagaagttccacgacccctgcc 360
           ||||||||| ||||| ||||| | ||||||||||||||||||||||| |||||||| |||
Sbjct: 332 gctcccagggattaagacccaccagcgaacttggacttgagaagttcgacgaccccggcc 273

                                                                       
Query: 361 tccacccggagcgccttggtgagcaccggcgtcgggataggcgggtttgagccgaagagc 420
           |||||||  || |||||||||||||||||||| ||||| |||||||| || |||||||||
Sbjct: 272 tccacccttagtgccttggtgagcaccggcgtggggattggcgggttggaaccgaagagc 213



 Score =  113 bits (57), Expect = 5e-22
 Identities = 94/105 (89%), Gaps = 1/105 (0%)
 Strand = Plus / Minus

                                                                       
Query: 138 ttcctcgtattggttctgaagattaaaccatgaggctaacttattcaat-ttattacaac 196
           ||||||||||||| |||||||  ||||||  |||||||||||||||||| ||||||||||
Sbjct: 498 ttcctcgtattggctctgaaggctaaaccgcgaggctaacttattcaatcttattacaac 439

                                                        
Query: 197 tgcatgcgagattaaccggaagcttgaatacatgtcttctgctga 241
           |||||||||| ||| |  ||||||||||||| |||||||||||||
Sbjct: 438 tgcatgcgagcttagctagaagcttgaatacgtgtcttctgctga 394
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>emb|AJ492380.1|LPE492380 Lolium perenne mRNA for oxalate oxidase 2 (oxO2 gene)
          Length = 867

 Score =  131 bits (66), Expect = 2e-27
 Identities = 96/106 (90%)
 Strand = Plus / Minus

                                                                       
Query: 313 taaaacccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggagc 372
           |||||||| ||||| ||||||||||||||||||||||||||||| || ||| | ||||||
Sbjct: 671 taaaaccctgcggcaaacttggacttgagaagttccacgaccccagcatccgcacggagc 612

                                                         
Query: 373 gccttggtgagcaccggcgtcgggataggcgggtttgagccgaaga 418
           |||||||||||||||||||||||||| || ||||| || |||||||
Sbjct: 611 gccttggtgagcaccggcgtcgggatcggtgggttggaaccgaaga 566
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>emb|AJ556991.1|TAE556991 Triticum aestivum mRNA for oxalate oxidase precursor (OXO1 gene)
          Length = 675

 Score =  127 bits (64), Expect = 3e-26
 Identities = 97/108 (89%)
 Strand = Plus / Minus

                                                                       
Query: 312 ttaaaacccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggag 371
           ||||||||||||||| ||||||||||| |||||||| |||||||| ||||||||||  ||
Sbjct: 675 ttaaaacccagcggcaaacttggacttcagaagttcgacgaccccggcctccacccttag 616

                                                           
Query: 372 cgccttggtgagcaccggcgtcgggataggcgggtttgagccgaagag 419
            |||||||||||||||||||||||||| || ||||| |||| ||||||
Sbjct: 615 agccttggtgagcaccggcgtcgggatgggtgggttggagctgaagag 568
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>gb|L15737.1|BLYGERMIN Barley germin mRNA, partial cds
          Length = 603

 Score =  125 bits (63), Expect = 1e-25
 Identities = 93/103 (90%)
 Strand = Plus / Minus

                                                                       
Query: 317 acccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggagcgcct 376
           ||||| ||||||||||||||||||||||||||||||| || |||||||||||||| ||||
Sbjct: 601 acccaccggcgaacttggacttgagaagttccacgactccggcctccacccggagagcct 542

                                                      
Query: 377 tggtgagcaccggcgtcgggataggcgggtttgagccgaagag 419
           |||||||||| ||||| ||||| || ||||  |||||||||||
Sbjct: 541 tggtgagcacgggcgtggggatgggagggtcggagccgaagag 499
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>emb|AJ504848.1|LPE504848 Lolium perenne mRNA for oxalate oxidase (oxo3 gene)
          Length = 868

 Score =  105 bits (53), Expect = 1e-19
 Identities = 95/109 (87%)
 Strand = Plus / Minus

                                                                       
Query: 310 aattaaaacccagcggcgaacttggacttgagaagttccacgacccctgcctccacccgg 369
           ||||| ||||| || || ||||||||||||||||||||||||||||| || ||||| |||
Sbjct: 674 aattagaaccctgcagcaaacttggacttgagaagttccacgaccccagcgtccacacgg 615

                                                            
Query: 370 agcgccttggtgagcaccggcgtcgggataggcgggtttgagccgaaga 418
           || |||||||||||||| ||||| ||||| ||||| || || |||||||
Sbjct: 614 agtgccttggtgagcacgggcgtagggatcggcggattggaaccgaaga 566
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>emb|AJ291825.1|LPE291825 Lolium perenne mRNA for oxalate oxidase (oxO1 gene)
          Length = 934

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 92/107 (85%)
 Strand = Plus / Minus

                                                                       
Query: 312 ttaaaacccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggag 371
           |||||||||| |||| ||||| |||||||||||||| |||||||| || ||||| |||||
Sbjct: 777 ttaaaacccaccggcaaacttagacttgagaagttctacgaccccggcatccacacggag 718

                                                          
Query: 372 cgccttggtgagcaccggcgtcgggataggcgggtttgagccgaaga 418
           |||||||||||| || | ||| ||||| || ||||| ||||| ||||
Sbjct: 717 cgccttggtgagtacggccgtggggattggtgggttggagccaaaga 671
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>ref|XM_469349.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 684

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 86/100 (86%)
 Strand = Plus / Minus

                                                                       
Query: 317 acccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggagcgcct 376
           ||||| ||| |||||||||||| || || || ||||| || || ||||||||||||||||
Sbjct: 679 acccaccggtgaacttggacttaagcagctcgacgacgccggcgtccacccggagcgcct 620

                                                   
Query: 377 tggtgagcaccggcgtcgggataggcgggtttgagccgaa 416
           ||  |||||||||||||||||| || ||||| ||||||||
Sbjct: 619 tgacgagcaccggcgtcgggatgggtgggttggagccgaa 580
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 86/100 (86%)
 Strand = Plus / Plus

                                                                            
Query: 317      acccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggagcgcct 376
                ||||| ||| |||||||||||| || || || ||||| || || ||||||||||||||||
Sbjct: 27487933 acccaccggtgaacttggacttaagcagctcgacgacgccggcgtccacccggagcgcct 27487992

                                                        
Query: 377      tggtgagcaccggcgtcgggataggcgggtttgagccgaa 416
                ||  |||||||||||||||||| || ||||| ||||||||
Sbjct: 27487993 tgacgagcaccggcgtcgggatgggtgggttggagccgaa 27488032



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 72/86 (83%)
 Strand = Plus / Plus

                                                                            
Query: 331      ttggacttgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggc 390
                ||||||||||| || || || || || || ||||| ||||| ||||||   |||||||||
Sbjct: 27499871 ttggacttgagcagctcaactacaccagcatccacgcggagtgccttgacaagcaccggc 27499930

                                          
Query: 391      gtcgggataggcgggtttgagccgaa 416
                |||||||| |||||||| ||||||||
Sbjct: 27499931 gtcgggatgggcgggttggagccgaa 27499956



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 72/86 (83%)
 Strand = Plus / Plus

                                                                            
Query: 331      ttggacttgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggc 390
                ||||||||||| || || || || || || ||||| ||||| ||||||   |||||||||
Sbjct: 27496890 ttggacttgagcagctcaactacaccagcatccacgcggagtgccttgacaagcaccggc 27496949

                                          
Query: 391      gtcgggataggcgggtttgagccgaa 416
                |||||||| |||||||| ||||||||
Sbjct: 27496950 gtcgggatgggcgggttggagccgaa 27496975



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                 
Query: 381      gagcaccggcgtcgggataggcgggtttgagcc 413
                |||||||||||||||||| |||||||| |||||
Sbjct: 27492601 gagcaccggcgtcgggatgggcgggttggagcc 27492633
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 86/100 (86%)
 Strand = Plus / Plus

                                                                            
Query: 317      acccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggagcgcct 376
                ||||| ||| |||||||||||| || || || ||||| || || ||||||||||||||||
Sbjct: 27579256 acccaccggtgaacttggacttaagcagctcgacgacgccggcgtccacccggagcgcct 27579315

                                                        
Query: 377      tggtgagcaccggcgtcgggataggcgggtttgagccgaa 416
                ||  |||||||||||||||||| || ||||| ||||||||
Sbjct: 27579316 tgacgagcaccggcgtcgggatgggtgggttggagccgaa 27579355



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 72/86 (83%)
 Strand = Plus / Plus

                                                                            
Query: 331      ttggacttgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggc 390
                ||||||||||| || || || || || || ||||| ||||| ||||||   |||||||||
Sbjct: 27591194 ttggacttgagcagctcaactacaccagcatccacgcggagtgccttgacaagcaccggc 27591253

                                          
Query: 391      gtcgggataggcgggtttgagccgaa 416
                |||||||| |||||||| ||||||||
Sbjct: 27591254 gtcgggatgggcgggttggagccgaa 27591279



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 72/86 (83%)
 Strand = Plus / Plus

                                                                            
Query: 331      ttggacttgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggc 390
                ||||||||||| || || || || || || ||||| ||||| ||||||   |||||||||
Sbjct: 27588213 ttggacttgagcagctcaactacaccagcatccacgcggagtgccttgacaagcaccggc 27588272

                                          
Query: 391      gtcgggataggcgggtttgagccgaa 416
                |||||||| |||||||| ||||||||
Sbjct: 27588273 gtcgggatgggcgggttggagccgaa 27588298



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                 
Query: 381      gagcaccggcgtcgggataggcgggtttgagcc 413
                |||||||||||||||||| |||||||| |||||
Sbjct: 27583924 gagcaccggcgtcgggatgggcgggttggagcc 27583956
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>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence, complete
             sequence
          Length = 123406

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 86/100 (86%)
 Strand = Plus / Minus

                                                                         
Query: 317   acccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggagcgcct 376
             ||||| ||| |||||||||||| || || || ||||| || || ||||||||||||||||
Sbjct: 62581 acccaccggtgaacttggacttaagcagctcgacgacgccggcgtccacccggagcgcct 62522

                                                     
Query: 377   tggtgagcaccggcgtcgggataggcgggtttgagccgaa 416
             ||  |||||||||||||||||| || ||||| ||||||||
Sbjct: 62521 tgacgagcaccggcgtcgggatgggtgggttggagccgaa 62482



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                         
Query: 331   ttggacttgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggc 390
             ||||||||||| || || || || || || ||||| ||||| ||||||   |||||||||
Sbjct: 53624 ttggacttgagcagctcaactacaccagcatccacgcggagtgccttgacaagcaccggc 53565

                                       
Query: 391   gtcgggataggcgggtttgagccgaa 416
             |||||||| |||||||| ||||||||
Sbjct: 53564 gtcgggatgggcgggttggagccgaa 53539



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                         
Query: 331   ttggacttgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggc 390
             ||||||||||| || || || || || || ||||| ||||| ||||||   |||||||||
Sbjct: 50643 ttggacttgagcagctcaactacaccagcatccacgcggagtgccttgacaagcaccggc 50584

                                       
Query: 391   gtcgggataggcgggtttgagccgaa 416
             |||||||| |||||||| ||||||||
Sbjct: 50583 gtcgggatgggcgggttggagccgaa 50558



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 381   gagcaccggcgtcgggataggcgggtttgagcc 413
             |||||||||||||||||| |||||||| |||||
Sbjct: 57913 gagcaccggcgtcgggatgggcgggttggagcc 57881
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>gb|AF261942.1|AF261942 Zea mays clone AW042316 germin-like protein 2 (GLP2) mRNA, partial
           cds
          Length = 591

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 77/88 (87%)
 Strand = Plus / Minus

                                                                       
Query: 317 acccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggagcgcct 376
           ||||| ||||||||||||||||||  || |||||||| |  || ||||||||||||||||
Sbjct: 211 acccaccggcgaacttggacttgatgagatccacgacactggcgtccacccggagcgcct 152

                                       
Query: 377 tggtgagcaccggcgtcgggataggcgg 404
           ||| |||||||||||| ||||| |||||
Sbjct: 151 tggagagcaccggcgtggggatcggcgg 124
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>dbj|AK103716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033137P21, full
           insert sequence
          Length = 998

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 86/100 (86%)
 Strand = Plus / Minus

                                                                       
Query: 317 acccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggagcgcct 376
           ||||| ||| |||||||||||| || || || ||||| || || ||||||||||||||||
Sbjct: 805 acccaccggtgaacttggacttaagcagctcgacgacgccggcgtccacccggagcgcct 746

                                                   
Query: 377 tggtgagcaccggcgtcgggataggcgggtttgagccgaa 416
           ||  |||||||||||||||||| || ||||| ||||||||
Sbjct: 745 tgacgagcaccggcgtcgggatgggtgggttggagccgaa 706
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>gb|AY108860.1| Zea mays PCO074541 mRNA sequence
          Length = 589

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 77/88 (87%)
 Strand = Plus / Minus

                                                                       
Query: 317 acccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggagcgcct 376
           ||||| ||||||||||||||||||  || |||||||| |  || ||||||||||||||||
Sbjct: 242 acccaccggcgaacttggacttgatgagatccacgacactggcgtccacccggagcgcct 183

                                       
Query: 377 tggtgagcaccggcgtcgggataggcgg 404
           ||| |||||||||||| ||||| |||||
Sbjct: 182 tggagagcaccggcgtggggatcggcgg 155
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>emb|Y09915.1|TAPSBGER1 T.aestivum mRNA for germin-like protein 1
          Length = 856

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 73/82 (89%), Gaps = 1/82 (1%)
 Strand = Plus / Minus

                                                                       
Query: 312 ttaaaacccagcggcgaacttggacttgagaagttccacgacccct-gcctccacccgga 370
           |||||||||| | |||||||||||||||| |||||| ||||||||| ||||| | ||  |
Sbjct: 762 ttaaaacccaccagcgaacttggacttgaaaagttcgacgacccctggcctctatcctta 703

                                 
Query: 371 gcgccttggtgagcaccggcgt 392
           ||||||||||||||||||||||
Sbjct: 702 gcgccttggtgagcaccggcgt 681
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>ref|XM_469352.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1017

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                       
Query: 331 ttggacttgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggc 390
           ||||||||||| || || || || || || ||||| ||||| ||||||   |||||||||
Sbjct: 807 ttggacttgagcagctcaactacaccagcatccacgcggagtgccttgacaagcaccggc 748

                                     
Query: 391 gtcgggataggcgggtttgagccgaa 416
           |||||||| |||||||| ||||||||
Sbjct: 747 gtcgggatgggcgggttggagccgaa 722
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>ref|XM_469351.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 684

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                       
Query: 331 ttggacttgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggc 390
           ||||||||||| || || || || || || ||||| ||||| ||||||   |||||||||
Sbjct: 665 ttggacttgagcagctcaactacaccagcatccacgcggagtgccttgacaagcaccggc 606

                                     
Query: 391 gtcgggataggcgggtttgagccgaa 416
           |||||||| |||||||| ||||||||
Sbjct: 605 gtcgggatgggcgggttggagccgaa 580
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>dbj|AK059872.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-F02, full
           insert sequence
          Length = 1028

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                       
Query: 331 ttggacttgagaagttccacgacccctgcctccacccggagcgccttggtgagcaccggc 390
           ||||||||||| || || || || || || ||||| ||||| ||||||   |||||||||
Sbjct: 818 ttggacttgagcagctcaactacaccagcatccacgcggagtgccttgacaagcaccggc 759

                                     
Query: 391 gtcgggataggcgggtttgagccgaa 416
           |||||||| |||||||| ||||||||
Sbjct: 758 gtcgggatgggcgggttggagccgaa 733
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>ref|XM_469350.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 690

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 381 gagcaccggcgtcgggataggcgggtttgagcc 413
           |||||||||||||||||| |||||||| |||||
Sbjct: 621 gagcaccggcgtcgggatgggcgggttggagcc 589
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>emb|BX323560.16| Zebrafish DNA sequence from clone DKEY-265E15 in linkage group 4,
             complete sequence
          Length = 190574

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 72    acaaatatatgcaaaatgcaaa 93
             ||||||||||||||||||||||
Sbjct: 52188 acaaatatatgcaaaatgcaaa 52209
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>gb|AC112926.7| Mus musculus chromosome 3, clone RP23-215M7, complete sequence
          Length = 222106

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 98     attttttgacaaagatggcaa 118
              |||||||||||||||||||||
Sbjct: 151453 attttttgacaaagatggcaa 151473
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>gb|AC147010.31| Medicago truncatula clone mth2-145p5, complete sequence
          Length = 132320

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 36     actttggaacatgtttgactt 56
              |||||||||||||||||||||
Sbjct: 129606 actttggaacatgtttgactt 129626
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>gb|AC068984.15| Homo sapiens 3 BAC RP11-549K5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 49251

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 74    aaatatatgcaaaatgcaaac 94
             |||||||||||||||||||||
Sbjct: 27711 aaatatatgcaaaatgcaaac 27691
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>gb|AC158464.2| Medicago truncatula chromosome 2 BAC clone mth2-145m24, complete
             sequence
          Length = 89051

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 36    actttggaacatgtttgactt 56
             |||||||||||||||||||||
Sbjct: 33951 actttggaacatgtttgactt 33931
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>dbj|AB210620.1| Ciona intestinalis mRNA for p38 kinase, complete cds, clone:
            cinc009m21
          Length = 3582

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 336  cttgagaagttccacgacccc 356
            |||||||||||||||||||||
Sbjct: 987  cttgagaagttccacgacccc 1007
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>dbj|AK173857.1| Ciona intestinalis cDNA, clone:cicl006g22, full insert sequence
          Length = 1395

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 336  cttgagaagttccacgacccc 356
            |||||||||||||||||||||
Sbjct: 987  cttgagaagttccacgacccc 1007
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>gb|AF217490.1|AF217491S3 Homo sapiens fragile 16D oxido reductase (FOR) gene, exons 8, 9, and
              partial cds
          Length = 270752

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 67     attggacaaatatatgcaaa 86
              ||||||||||||||||||||
Sbjct: 179870 attggacaaatatatgcaaa 179851
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>gb|AC138359.8| Mus musculus chromosome 1, clone RP24-383H12, complete sequence
          Length = 217891

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    ttggaacatgtttgacttac 58
             ||||||||||||||||||||
Sbjct: 12786 ttggaacatgtttgacttac 12805
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 113     tggcaataaaaggtagtaca 132
               ||||||||||||||||||||
Sbjct: 4454984 tggcaataaaaggtagtaca 4455003
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>emb|CR932600.1|CNS0KYBV Paramecium tetraurelia, Small GTPase rab, putative, complete gene
          Length = 3001

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 174  taacttattcaatttattac 193
            ||||||||||||||||||||
Sbjct: 2656 taacttattcaatttattac 2637
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>gb|AC122814.3| Mus musculus BAC clone RP23-234A12 from 6, complete sequence
          Length = 144136

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 79     tatgcaaaatgcaaactatattttttga 106
              |||| |||||||| ||||||||||||||
Sbjct: 111941 tatgaaaaatgcatactatattttttga 111914
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>gb|AC004456.1| Homo sapiens PAC clone RP5-1100F23 from 7, complete sequence
          Length = 143436

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 98    attttttgacaaagatggcaataa 121
             ||||||||||||||||| ||||||
Sbjct: 56671 attttttgacaaagatgccaataa 56694
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>emb|AL445189.7| Human DNA sequence from clone RP11-249L21 on chromosome 6 Contains part
              of a novel gene, a ribosomal protein S12 (RPS12)
              pseudogene, the 5' end of a novel gene,  an  ATP synthase,
              H+ transporting, mitochondrial F0 complex, subunit f,
              isoform 2 (ATP5J2) psuedogene and part of a novel gene,
              complete sequence
          Length = 134566

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 232    cttctgctgagaatcattaaattt 255
              |||||||||||||| |||||||||
Sbjct: 106068 cttctgctgagaattattaaattt 106091
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>emb|AL390208.17| Human DNA sequence from clone RP11-787I22 on chromosome 6 Contains the
             3' part of a novel gene, the PA26 gene for p53 regulated
             PA26 nuclear protein and a CpG island, complete sequence
          Length = 109878

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 232   cttctgctgagaatcattaaattt 255
             |||||||||||||| |||||||||
Sbjct: 11927 cttctgctgagaattattaaattt 11950
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>emb|AL135790.7| Human DNA sequence from clone RP11-87N24 on chromosome 9p22.1-23 Contains
              a ribosomal protein S12 (RPS12) pseudogene, 2 novel genes,
              the 5' end of a variant of the PTPRD gene for protein
              tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD).
              and a CpG island, complete sequence
          Length = 176273

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 152    tctgaagattaaaccatgag 171
              ||||||||||||||||||||
Sbjct: 125588 tctgaagattaaaccatgag 125607
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>emb|AL133393.16| Human DNA sequence from clone RP1-21P18 on chromosome 6, complete
             sequence
          Length = 24112

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    caaatggtaattggacaaat 77
             ||||||||||||||||||||
Sbjct: 12390 caaatggtaattggacaaat 12409
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>emb|X87369.1|CPNANH C.perfringens nanH gene & ORF1,2,3 & 4
          Length = 6482

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  tgacaaagatggcaataaaa 123
            ||||||||||||||||||||
Sbjct: 2430 tgacaaagatggcaataaaa 2449
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>gb|AC103749.2| Homo sapiens chromosome 15, clone RP11-4F5, complete sequence
          Length = 190678

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 84     aaaatgcaaactatattttt 103
              ||||||||||||||||||||
Sbjct: 102709 aaaatgcaaactatattttt 102690
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>gb|AF012825.2| Ectromelia virus strain Moscow, complete genome
          Length = 209771

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    tggacaaatatatgcaaaat 88
             ||||||||||||||||||||
Sbjct: 62664 tggacaaatatatgcaaaat 62683
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>gb|AC110788.3| Homo sapiens BAC clone RP11-473D24 from 4, complete sequence
          Length = 80766

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   ttattcaatttattacaact 197
             ||||||||||||||||||||
Sbjct: 36778 ttattcaatttattacaact 36759
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>emb|BX322623.7| Zebrafish DNA sequence from clone CH211-256I14 in linkage group 15,
             complete sequence
          Length = 104062

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 275   aattatgcattgattattta 294
             ||||||||||||||||||||
Sbjct: 18665 aattatgcattgattattta 18684
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>emb|BX649257.8| Zebrafish DNA sequence from clone CH211-197L9 in linkage group 23,
              complete sequence
          Length = 182686

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 85     aaatgcaaactatatttttt 104
              ||||||||||||||||||||
Sbjct: 152647 aaatgcaaactatatttttt 152666
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>gb|AC117832.6| Homo sapiens chromosome 15, clone RP11-963M5, complete sequence
          Length = 171462

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    aaaatgcaaactatattttt 103
             ||||||||||||||||||||
Sbjct: 11383 aaaatgcaaactatattttt 11402
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>gb|AC110073.3| Homo sapiens BAC clone RP11-62A4 from 4, complete sequence
          Length = 130088

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 100    tttttgacaaagatggcaataaaa 123
              ||||||||||||||| ||||||||
Sbjct: 107179 tttttgacaaagatgccaataaaa 107156
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>gb|AC008276.4| Homo sapiens BAC clone RP11-297I3 from 2, complete sequence
          Length = 208477

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 67     attggacaaatatatgcaaa 86
              ||||||||||||||||||||
Sbjct: 195124 attggacaaatatatgcaaa 195105
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>gb|AC137643.3| Homo sapiens chromosome 16 clone RP11-95H3, complete sequence
          Length = 159836

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    tatatgcaaaatgcaaacta 96
             ||||||||||||||||||||
Sbjct: 39164 tatatgcaaaatgcaaacta 39183
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>emb|BX294386.5| Zebrafish DNA sequence from clone CH211-207B9 in linkage group 8,
             complete sequence
          Length = 117352

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 275   aattatgcattgattattta 294
             ||||||||||||||||||||
Sbjct: 59483 aattatgcattgattattta 59464
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>gb|AC009141.7| Homo sapiens chromosome 16 clone RP11-543G23, complete sequence
          Length = 201716

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 67     attggacaaatatatgcaaa 86
              ||||||||||||||||||||
Sbjct: 195587 attggacaaatatatgcaaa 195606
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>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome
          Length = 3031430

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 104    tgacaaagatggcaataaaa 123
              ||||||||||||||||||||
Sbjct: 902163 tgacaaagatggcaataaaa 902182
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>emb|BX469936.11| Zebrafish DNA sequence from clone DKEY-32I12 in linkage group 19,
              complete sequence
          Length = 141772

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 84     aaaatgcaaactatattttt 103
              ||||||||||||||||||||
Sbjct: 127119 aaaatgcaaactatattttt 127100
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>gb|AC123676.9| Mus musculus chromosome 1, clone RP23-275F9, complete sequence
          Length = 169201

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 39     ttggaacatgtttgacttac 58
              ||||||||||||||||||||
Sbjct: 152208 ttggaacatgtttgacttac 152227
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 335     acttgagaagttccacgacc 354
               ||||||||||||||||||||
Sbjct: 2624441 acttgagaagttccacgacc 2624460
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>gb|DQ066531.1| Raccoonpox virus isolate rcn-85a DNA polymerase gene, complete cds
          Length = 3018

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 69   tggacaaatatatgcaaaat 88
            ||||||||||||||||||||
Sbjct: 2805 tggacaaatatatgcaaaat 2786
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>gb|AC171501.2| Mus musculus BAC clone RP23-255N3 from chromosome 6, complete sequence
          Length = 170938

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 79     tatgcaaaatgcaaactatattttttga 106
              |||| |||||||| ||||||||||||||
Sbjct: 123679 tatgaaaaatgcatactatattttttga 123706
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>emb|AL672008.8| Mouse DNA sequence from clone RP23-389M3 on chromosome X, complete
            sequence
          Length = 160571

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 74   aaatatatgcaaaatgcaaa 93
            ||||||||||||||||||||
Sbjct: 3176 aaatatatgcaaaatgcaaa 3195


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,717,900
Number of Sequences: 3902068
Number of extensions: 4717900
Number of successful extensions: 101384
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101092
Number of HSP's gapped (non-prelim): 281
length of query: 421
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 399
effective length of database: 17,147,199,772
effective search space: 6841732709028
effective search space used: 6841732709028
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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