ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart56h08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY106744.1| Zea mays PCO111647 mRNA sequence 204 2e-49
2emb|AJ875021.1| Zea mays mRNA for xyloglucan endo-transglycosyla... 135 1e-28
3gb|BT017380.1| Zea mays clone EL01N0326D06.c mRNA sequence 70 7e-09
4gb|AY106262.1| Zea mays PCO111648 mRNA sequence 70 7e-09
5ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group... 60 6e-06
6ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA 60 6e-06
7dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
8dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mR... 60 6e-06
9dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
10dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
11dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
12gb|BT017812.1| Zea mays clone EL01N0507B07.c mRNA sequence 58 3e-05
13gb|AY105107.1| Zea mays PCO140468 mRNA sequence 58 3e-05
14emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotransgl... 54 4e-04
15gb|AY589588.1| Triticum aestivum endotransglucosylase/hydrolase ... 54 4e-04
16gb|AY589586.1| Triticum aestivum endotransglucosylase/hydrolase ... 54 4e-04
17gb|AY107002.1| Zea mays PCO111646 mRNA sequence 52 0.002
18emb|AJ295944.1|FPR295944 Festuca pratensis mRNA for Xet2 protein 48 0.024
19gb|AY589587.1| Triticum aestivum endotransglucosylase/hydrolase ... 48 0.024
20gb|AY589585.1| Triticum aestivum endotransglucosylase/hydrolase ... 46 0.096
21gb|AY821734.1| Bromus tectorum beta amylase gene, partial cds 42 1.5
22ref|XM_603915.2| PREDICTED: Bos taurus similar to Neurturin prec... 42 1.5
23gb|AC139341.3| Atelerix albiventris clone LB4-464N6, complete se... 42 1.5
24gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold 42 1.5
25dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
26dbj|AP004785.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
27emb|BX640457.5| Zebrafish DNA sequence from clone DKEY-17A19 in ... 42 1.5
28ref|NM_195670.1| Oryza sativa (japonica cultivar-group) putative... 40 5.9
29gb|AC120859.12| Mus musculus chromosome 18, clone RP24-200D2, co... 40 5.9
30ref|XM_365763.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 5.9
31ref|XM_390179.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 40 5.9
32gb|AC118632.7| Mus musculus chromosome 18, clone RP24-94D24, com... 40 5.9
33emb|AL590128.11| Human DNA sequence from clone RP11-312B8 on chr... 40 5.9
34emb|AL513317.11| Human DNA sequence from clone RP11-393P6 on chr... 40 5.9
35gb|AC094241.9| Rattus norvegicus 1 BAC CH230-3C7 (Children's Hos... 40 5.9
36emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransgly... 40 5.9
37emb|CR548612.1| Paramecium tetraurelia macronuclear largest chro... 40 5.9
38emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, ... 40 5.9
39gb|AC131968.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.9
40emb|AL669951.18| Mouse DNA sequence from clone RP23-94F11 on chr... 40 5.9
41emb|AL645589.24| Mouse DNA sequence from clone RP23-289H16 on ch... 40 5.9
42gb|AC154873.6| Mus musculus chromosome 1, clone RP23-71J17, comp... 40 5.9
43gb|AC098682.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 5.9
44gb|AC084197.1| Caenorhabditis elegans cosmid Y73B6BL, complete s... 40 5.9
45emb|CR407306.1| Gallus gallus finished cDNA, clone ChEST642m10 40 5.9
46dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
47gb|AF463767.1| Mus musculus strain C57BL/6J cytokine gene cluste... 40 5.9
48dbj|AK106038.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
49gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.9
50emb|CT027657.3| Macaca mulatta chromosome 9 BAC CH250-255J18, co... 40 5.9 
>gb|AY106744.1| Zea mays PCO111647 mRNA sequence
          Length = 1267

 Score =  204 bits (103), Expect = 2e-49
 Identities = 237/281 (84%), Gaps = 3/281 (1%)
 Strand = Plus / Minus

                                                                       
Query: 164 atcagtagcggctgcactcggcggggaacccctgtgggaacctgtagccatctgcgcagt 223
           |||||| ||||  ||||||||||||||  || || ||||||||  | |||||   |||||
Sbjct: 936 atcagtggcgggcgcactcggcggggagtccttgcgggaacctccacccatcctggcagt 877

                                                                       
Query: 224 agttgtagcgcatgtaattttgctccgcccacttgacggtgccccactcggagccgtcga 283
           |||||||||||||| | ||  ||||||||||| |||||||||||||||||| || ||| |
Sbjct: 876 agttgtagcgcatgaagttgcgctccgcccacctgacggtgccccactcggcgctgtcaa 817

                                                                       
Query: 284 gctgcctgttcatccacccgtcgctgccggcat---ggcaagcgccgccgctggcgcagg 340
           |||||||||||||||||||| ||||||||||     |||| |||||||||||| ||||||
Sbjct: 816 gctgcctgttcatccacccgccgctgccggcggcccggcacgcgccgccgctgacgcagg 757

                                                                       
Query: 341 cgttggcgtagtagtttttgtacaagacgttgaagggtgcgttggaccagtcgatgggga 400
           || ||||||||||| |   |||  |||||  |||||| |||| |||||||||||||  ||
Sbjct: 756 cgctggcgtagtagctgcggtaggagacgacgaagggcgcgtcggaccagtcgatgccga 697

                                                    
Query: 401 ccttgcccttctcggtcgcccagtagctgccgtcccacagc 441
           || ||||||||||||| ||||||||||||||||||||||||
Sbjct: 696 ccctgcccttctcggtggcccagtagctgccgtcccacagc 656



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 44/48 (91%), Gaps = 1/48 (2%)
 Strand = Plus / Minus

                                                            
Query: 65   cagggctgctttttaattacaaaattcacaaagaagaacaagaatcat 112
            ||||||||||||||||| || |||| ||||||||||| ||||||||||
Sbjct: 1041 cagggctgctttttaatcac-aaatccacaaagaagagcaagaatcat 995
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>emb|AJ875021.1| Zea mays mRNA for xyloglucan endo-transglycosylase/hydrolase (xth1
           gene), cultivated variety W64A
          Length = 1225

 Score =  135 bits (68), Expect = 1e-28
 Identities = 223/274 (81%), Gaps = 3/274 (1%)
 Strand = Plus / Minus

                                                                       
Query: 171 gcggctgcactcggcggggaacccctgtgggaacctgtagccatctgcgcagtagttgta 230
           ||||||||||||||  ||||  ||||| |||||||   |||| ||  |||||||||||||
Sbjct: 933 gcggctgcactcgggcgggaggccctgggggaaccgccagccgtcgtcgcagtagttgta 874

                                                                       
Query: 231 gcgcatgtaattttgctccgcccacttgacggtgccccactcggagccgtcgagctgcct 290
           ||||||||| ||   ||| ||||||  ||||||||||||||||| | ||||| ||||| |
Sbjct: 873 gcgcatgtagttgctctcggcccaccggacggtgccccactcggcgtcgtcgggctgctt 814

                                                                       
Query: 291 gttcatccacc---cgtcgctgccggcatggcaagcgccgccgctggcgcaggcgttggc 347
           | |||||||||   |||||| |||| |   ||| || ||||||||| |||||||||||||
Sbjct: 813 gctcatccacccgtcgtcgccgccgccgccgcaggccccgccgctgacgcaggcgttggc 754

                                                                       
Query: 348 gtagtagtttttgtacaagacgttgaagggtgcgttggaccagtcgatggggaccttgcc 407
           | |||||     |||  |||||  |||||| |||  ||||||||| | ||| ||||||||
Sbjct: 753 ggagtagccccggtaggagacgacgaagggcgcggcggaccagtccacgggcaccttgcc 694

                                             
Query: 408 cttctcggtcgcccagtagctgccgtcccacagc 441
           ||||||||| ||||||||||||||||||||||||
Sbjct: 693 cttctcggtggcccagtagctgccgtcccacagc 660
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>gb|BT017380.1| Zea mays clone EL01N0326D06.c mRNA sequence
          Length = 781

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 122/151 (80%)
 Strand = Plus / Minus

                                                                       
Query: 164 atcagtagcggctgcactcggcggggaacccctgtgggaacctgtagccatctgcgcagt 223
           |||||| ||||  ||||||||||||||| ||||| ||||| |   |||| ||  ||||||
Sbjct: 513 atcagttgcgggagcactcggcggggaagccctgcgggaatcgccagccgtcgtcgcagt 454

                                                                       
Query: 224 agttgtagcgcatgtaattttgctccgcccacttgacggtgccccactcggagccgtcga 283
           |||||||| ||||||| || |||   |||||   ||||||||||||||||| | ||||||
Sbjct: 453 agttgtagtgcatgtagttctgcctggcccaggcgacggtgccccactcggcggcgtcga 394

                                          
Query: 284 gctgcctgttcatccacccgtcgctgccggc 314
           |||| | | ||||||| | |||| |||||||
Sbjct: 393 gctggcggctcatccagcggtcggtgccggc 363



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 418 gcccagtagctgccgtcccacagc 441
           ||||||||||||||||||||||||
Sbjct: 244 gcccagtagctgccgtcccacagc 221
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>gb|AY106262.1| Zea mays PCO111648 mRNA sequence
          Length = 1257

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 122/151 (80%)
 Strand = Plus / Minus

                                                                       
Query: 164 atcagtagcggctgcactcggcggggaacccctgtgggaacctgtagccatctgcgcagt 223
           |||||| ||||  ||||||||||||||| ||||| ||||| |   |||| ||  ||||||
Sbjct: 991 atcagttgcgggagcactcggcggggaagccctgcgggaagcgccagccgtcgtcgcagt 932

                                                                       
Query: 224 agttgtagcgcatgtaattttgctccgcccacttgacggtgccccactcggagccgtcga 283
           |||||||| ||||||| || |||   |||||   ||||||||||||||||| | ||||||
Sbjct: 931 agttgtagtgcatgtagttctgcctggcccaggcgacggtgccccactcggcggcgtcga 872

                                          
Query: 284 gctgcctgttcatccacccgtcgctgccggc 314
           |||| | | ||||||| | |||| |||||||
Sbjct: 871 gctggcggctcatccagcggtcggtgccggc 841



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 418 gcccagtagctgccgtcccacagc 441
           ||||||||||||||||||||||||
Sbjct: 722 gcccagtagctgccgtcccacagc 699
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>ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.17 mRNA
          Length = 1127

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 90/110 (81%)
 Strand = Plus / Minus

                                                                       
Query: 177 gcactcggcggggaacccctgtgggaacctgtagccatctgcgcagtagttgtagcgcat 236
           ||||||||||||||| ||||| ||||| |   |||| || |||||||||||||||  |||
Sbjct: 904 gcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgtaggacat 845

                                                             
Query: 237 gtaattttgctccgcccacttgacggtgccccactcggagccgtcgagct 286
           ||| ||  |||| ||||||  |||||||||   ||||| |||||||||||
Sbjct: 844 gtagttgcgctcggcccacgcgacggtgccgagctcggcgccgtcgagct 795



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                      
Query: 415 gtcgcccagtagctgccgtcccacagc 441
           |||||||||||||||||||||||||||
Sbjct: 642 gtcgcccagtagctgccgtcccacagc 616
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>ref|XM_480868.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1111

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 90/110 (81%)
 Strand = Plus / Minus

                                                                       
Query: 177 gcactcggcggggaacccctgtgggaacctgtagccatctgcgcagtagttgtagcgcat 236
           ||||||||||||||| ||||| ||||| |   |||| || |||||||||||||||  |||
Sbjct: 909 gcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgtaggacat 850

                                                             
Query: 237 gtaattttgctccgcccacttgacggtgccccactcggagccgtcgagct 286
           ||| ||  |||| ||||||  |||||||||   ||||| |||||||||||
Sbjct: 849 gtagttgcgctcggcccacgcgacggtgccgagctcggcgccgtcgagct 800



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                      
Query: 415 gtcgcccagtagctgccgtcccacagc 441
           |||||||||||||||||||||||||||
Sbjct: 647 gtcgcccagtagctgccgtcccacagc 621
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 90/110 (81%)
 Strand = Plus / Minus

                                                                           
Query: 177     gcactcggcggggaacccctgtgggaacctgtagccatctgcgcagtagttgtagcgcat 236
               ||||||||||||||| ||||| ||||| |   |||| || |||||||||||||||  |||
Sbjct: 8322675 gcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgtaggacat 8322616

                                                                 
Query: 237     gtaattttgctccgcccacttgacggtgccccactcggagccgtcgagct 286
               ||| ||  |||| ||||||  |||||||||   ||||| |||||||||||
Sbjct: 8322615 gtagttgcgctcggcccacgcgacggtgccgagctcggcgccgtcgagct 8322566



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                          
Query: 415     gtcgcccagtagctgccgtcccacagc 441
               |||||||||||||||||||||||||||
Sbjct: 8322413 gtcgcccagtagctgccgtcccacagc 8322387
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>dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mRNA for xyloglucan
           endotransglycosylase-related protein 5, complete cds
          Length = 1280

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 90/110 (81%)
 Strand = Plus / Minus

                                                                       
Query: 177 gcactcggcggggaacccctgtgggaacctgtagccatctgcgcagtagttgtagcgcat 236
           ||||||||||||||| ||||| ||||| |   |||| || |||||||||||||||  |||
Sbjct: 900 gcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgtaggacat 841

                                                             
Query: 237 gtaattttgctccgcccacttgacggtgccccactcggagccgtcgagct 286
           ||| ||  |||| ||||||  |||||||||   ||||| |||||||||||
Sbjct: 840 gtagttgcgctcggcccacgcgacggtgccgagctcggcgccgtcgagct 791



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                      
Query: 415 gtcgcccagtagctgccgtcccacagc 441
           |||||||||||||||||||||||||||
Sbjct: 638 gtcgcccagtagctgccgtcccacagc 612
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>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0682A06
          Length = 142023

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 90/110 (81%)
 Strand = Plus / Minus

                                                                         
Query: 177   gcactcggcggggaacccctgtgggaacctgtagccatctgcgcagtagttgtagcgcat 236
             ||||||||||||||| ||||| ||||| |   |||| || |||||||||||||||  |||
Sbjct: 62784 gcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgtaggacat 62725

                                                               
Query: 237   gtaattttgctccgcccacttgacggtgccccactcggagccgtcgagct 286
             ||| ||  |||| ||||||  |||||||||   ||||| |||||||||||
Sbjct: 62724 gtagttgcgctcggcccacgcgacggtgccgagctcggcgccgtcgagct 62675



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                        
Query: 415   gtcgcccagtagctgccgtcccacagc 441
             |||||||||||||||||||||||||||
Sbjct: 62522 gtcgcccagtagctgccgtcccacagc 62496
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>dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F05, full
           insert sequence
          Length = 1111

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 90/110 (81%)
 Strand = Plus / Minus

                                                                       
Query: 177 gcactcggcggggaacccctgtgggaacctgtagccatctgcgcagtagttgtagcgcat 236
           ||||||||||||||| ||||| ||||| |   |||| || |||||||||||||||  |||
Sbjct: 909 gcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgtaggacat 850

                                                             
Query: 237 gtaattttgctccgcccacttgacggtgccccactcggagccgtcgagct 286
           ||| ||  |||| ||||||  |||||||||   ||||| |||||||||||
Sbjct: 849 gtagttgcgctcggcccacgcgacggtgccgagctcggcgccgtcgagct 800



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                      
Query: 415 gtcgcccagtagctgccgtcccacagc 441
           |||||||||||||||||||||||||||
Sbjct: 647 gtcgcccagtagctgccgtcccacagc 621
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>dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H12, full
           insert sequence
          Length = 1127

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 90/110 (81%)
 Strand = Plus / Minus

                                                                       
Query: 177 gcactcggcggggaacccctgtgggaacctgtagccatctgcgcagtagttgtagcgcat 236
           ||||||||||||||| ||||| ||||| |   |||| || |||||||||||||||  |||
Sbjct: 904 gcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgtaggacat 845

                                                             
Query: 237 gtaattttgctccgcccacttgacggtgccccactcggagccgtcgagct 286
           ||| ||  |||| ||||||  |||||||||   ||||| |||||||||||
Sbjct: 844 gtagttgcgctcggcccacgcgacggtgccgagctcggcgccgtcgagct 795



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                      
Query: 415 gtcgcccagtagctgccgtcccacagc 441
           |||||||||||||||||||||||||||
Sbjct: 642 gtcgcccagtagctgccgtcccacagc 616
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>gb|BT017812.1| Zea mays clone EL01N0507B07.c mRNA sequence
          Length = 1156

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 89/109 (81%)
 Strand = Plus / Minus

                                                                       
Query: 333 ggcgcaggcgttggcgtagtagtttttgtacaagacgttgaagggtgcgttggaccagtc 392
           ||||||||||||||||  ||||| |  |||  |||||  |||||| ||| ||||||||||
Sbjct: 624 ggcgcaggcgttggcggtgtagtctcggtaggagacgacgaagggcgcgctggaccagtc 565

                                                            
Query: 393 gatggggaccttgcccttctcggtcgcccagtagctgccgtcccacagc 441
           |||   ||||| ||||||    || ||||||||||||||||||||||||
Sbjct: 564 gatcttgacctcgcccttgcgcgtggcccagtagctgccgtcccacagc 516
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>gb|AY105107.1| Zea mays PCO140468 mRNA sequence
          Length = 1297

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 89/109 (81%)
 Strand = Plus / Minus

                                                                       
Query: 333 ggcgcaggcgttggcgtagtagtttttgtacaagacgttgaagggtgcgttggaccagtc 392
           ||||||||||||||||  ||||| |  |||  |||||  |||||| ||| ||||||||||
Sbjct: 788 ggcgcaggcgttggcggtgtagtctcggtaggagacgacgaagggcgcgctggaccagtc 729

                                                            
Query: 393 gatggggaccttgcccttctcggtcgcccagtagctgccgtcccacagc 441
           |||   ||||| ||||||    || ||||||||||||||||||||||||
Sbjct: 728 gatcttgacctcgcccttgcgcgtggcccagtagctgccgtcccacagc 680
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>emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotransglycosylase-like protein
          Length = 1110

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                      
Query: 415 gtcgcccagtagctgccgtcccacagc 441
           |||||||||||||||||||||||||||
Sbjct: 630 gtcgcccagtagctgccgtcccacagc 604
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>gb|AY589588.1| Triticum aestivum endotransglucosylase/hydrolase XTH4 mRNA,
           complete cds
          Length = 1100

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                      
Query: 415 gtcgcccagtagctgccgtcccacagc 441
           |||||||||||||||||||||||||||
Sbjct: 639 gtcgcccagtagctgccgtcccacagc 613



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 178 cactcggcggggaacccctgtgggaacctgtagccatctgcgcagtagttgtag 231
           |||||| ||||||| ||||  ||||||||  |||| || |||||||||||||||
Sbjct: 891 cactcgccggggaatcccttggggaacctccagccgtcggcgcagtagttgtag 838
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>gb|AY589586.1| Triticum aestivum endotransglucosylase/hydrolase XTH2 mRNA,
           complete cds
          Length = 1107

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 276 gccgtcgagctgcctgttcatccacccgtcgctgccggc 314
           ||||||||||| | ||||||||||| |||||||||||||
Sbjct: 791 gccgtcgagctccgtgttcatccacgcgtcgctgccggc 753



 Score = 46.1 bits (23), Expect = 0.096
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 161 tggatcagtagcggctgcactcggcggggaa 191
           ||||||||| |||| ||||||||||||||||
Sbjct: 906 tggatcagttgcggttgcactcggcggggaa 876



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 418 gcccagtagctgccgtccca 437
           ||||||||||||||||||||
Sbjct: 640 gcccagtagctgccgtccca 621
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>gb|AY107002.1| Zea mays PCO111646 mRNA sequence
          Length = 776

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 36/38 (94%), Gaps = 1/38 (2%)
 Strand = Plus / Minus

                                                 
Query: 400 accttgcccttctcggtcg-cccagtagctgccgtccc 436
           ||||||||||||||||| | ||||||||||||||||||
Sbjct: 728 accttgcccttctcggtggccccagtagctgccgtccc 691
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>emb|AJ295944.1|FPR295944 Festuca pratensis mRNA for Xet2 protein
          Length = 1189

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 418 gcccagtagctgccgtcccacagc 441
           ||||||||||||||||||||||||
Sbjct: 644 gcccagtagctgccgtcccacagc 621
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>gb|AY589587.1| Triticum aestivum endotransglucosylase/hydrolase XTH3 mRNA,
           complete cds
          Length = 938

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 414 ggtcgcccagtagctgccgtccca 437
           ||||||||||||||||||||||||
Sbjct: 643 ggtcgcccagtagctgccgtccca 620



 Score = 46.1 bits (23), Expect = 0.096
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 161 tggatcagtagcggctgcactcggcggggaa 191
           ||||||||| |||| ||||||||||||||||
Sbjct: 905 tggatcagttgcgggtgcactcggcggggaa 875



 Score = 46.1 bits (23), Expect = 0.096
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 276 gccgtcgagctgcctgttcatccacccgtcgctgccggc 314
           |||| |||||| | ||||||||||| |||||||||||||
Sbjct: 790 gccgccgagctccgtgttcatccacgcgtcgctgccggc 752
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>gb|AY589585.1| Triticum aestivum endotransglucosylase/hydrolase XTH1 mRNA,
           complete cds
          Length = 958

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 161 tggatcagtagcggctgcactcggcggggaa 191
           ||||||||| |||| ||||||||||||||||
Sbjct: 906 tggatcagttgcggttgcactcggcggggaa 876



 Score = 46.1 bits (23), Expect = 0.096
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 276 gccgtcgagctgcctgttcatccacccgtcgctgccggc 314
           |||||||||||   ||||||||||| |||||||||||||
Sbjct: 791 gccgtcgagctctgtgttcatccacgcgtcgctgccggc 753



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 418 gcccagtagctgccgtccca 437
           ||||||||||||||||||||
Sbjct: 640 gcccagtagctgccgtccca 621
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>gb|AY821734.1| Bromus tectorum beta amylase gene, partial cds
          Length = 1394

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 91  cacaaagaagaacaagaatca 111
           |||||||||||||||||||||
Sbjct: 287 cacaaagaagaacaagaatca 267
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>ref|XM_603915.2| PREDICTED: Bos taurus similar to Neurturin precursor (LOC525562),
           mRNA
          Length = 783

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 323 cgccgccgctggcgcaggcgt 343
           |||||||||||||||||||||
Sbjct: 490 cgccgccgctggcgcaggcgt 470
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>gb|AC139341.3| Atelerix albiventris clone LB4-464N6, complete sequence
          Length = 195266

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 79     aattacaaaattcacaaagaa 99
              |||||||||||||||||||||
Sbjct: 113004 aattacaaaattcacaaagaa 112984
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>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold
          Length = 2136267

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 79      aattacaaaattcacaaagaa 99
               |||||||||||||||||||||
Sbjct: 1248412 aattacaaaattcacaaagaa 1248392
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 78      taattacaaaattcacaaagaagaa 102
               ||||||||||||| |||||||||||
Sbjct: 6975959 taattacaaaattaacaaagaagaa 6975983
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>dbj|AP004785.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0061B07
          Length = 124766

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 78    taattacaaaattcacaaagaagaa 102
             ||||||||||||| |||||||||||
Sbjct: 35386 taattacaaaattaacaaagaagaa 35410
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>emb|BX640457.5| Zebrafish DNA sequence from clone DKEY-17A19 in linkage group 19,
             complete sequence
          Length = 36582

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 2     aataaaaattacatgcttctt 22
             |||||||||||||||||||||
Sbjct: 16293 aataaaaattacatgcttctt 16313
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>ref|NM_195670.1| Oryza sativa (japonica cultivar-group) putative glucosyltransferase
           (OSJNAa0053D03.20), mRNA
          Length = 549

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 323 cgccgccgctggcgcaggcg 342
           ||||||||||||||||||||
Sbjct: 183 cgccgccgctggcgcaggcg 202
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>gb|AC120859.12| Mus musculus chromosome 18, clone RP24-200D2, complete sequence
          Length = 184327

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 47     atcgcccacacgctgcctcagggctgcttttt 78
              ||||| ||||||||||||||||| ||| ||||
Sbjct: 172785 atcgctcacacgctgcctcagggatgcctttt 172816
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>ref|XM_365763.1| Magnaporthe grisea 70-15 hypothetical protein (MG02465.4) partial
            mRNA
          Length = 1767

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 332  tggcgcaggcgttggcgtag 351
            ||||||||||||||||||||
Sbjct: 1177 tggcgcaggcgttggcgtag 1158
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>ref|XM_390179.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG10003.1)
            partial mRNA
          Length = 1791

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 332  tggcgcaggcgttggcgtag 351
            ||||||||||||||||||||
Sbjct: 1204 tggcgcaggcgttggcgtag 1185
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>gb|AC118632.7| Mus musculus chromosome 18, clone RP24-94D24, complete sequence
          Length = 198636

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 47     atcgcccacacgctgcctcagggctgcttttt 78
              ||||| ||||||||||||||||| ||| ||||
Sbjct: 176101 atcgctcacacgctgcctcagggatgcctttt 176070
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>emb|AL590128.11| Human DNA sequence from clone RP11-312B8 on chromosome 1 Contains a
             novel gene, the 5' end of the CAMTA1 gene for calmodulin
             binding transcription activator 1, a ribosomal protein L37
             (RPL37) pseudogene and a CpG island, complete sequence
          Length = 204394

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    ctgctttttaattacaaaat 89
             ||||||||||||||||||||
Sbjct: 37640 ctgctttttaattacaaaat 37621
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>emb|AL513317.11| Human DNA sequence from clone RP11-393P6 on chromosome 9, complete
             sequence
          Length = 142368

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 79    aattacaaaattcacaaagaagaa 102
             ||||||||||| ||||||||||||
Sbjct: 60933 aattacaaaatacacaaagaagaa 60910
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>gb|AC094241.9| Rattus norvegicus 1 BAC CH230-3C7 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 215638

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     tcttttctgtaggaaaaatg 38
              ||||||||||||||||||||
Sbjct: 147012 tcttttctgtaggaaaaatg 146993
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>emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransglycosylase-like protein
           (PM5)
          Length = 1188

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 418 gcccagtagctgccgtccca 437
           ||||||||||||||||||||
Sbjct: 651 gcccagtagctgccgtccca 632
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>emb|CR548612.1| Paramecium tetraurelia macronuclear largest chromosome, complete sequence
          Length = 984602

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 76     tttaattacaaaattcacaaagaa 99
              |||||| |||||||||||||||||
Sbjct: 970451 tttaataacaaaattcacaaagaa 970474
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>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome
          Length = 5064019

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 81      ttacaaaattcacaaagaag 100
               ||||||||||||||||||||
Sbjct: 1193603 ttacaaaattcacaaagaag 1193584
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>gb|AC131968.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0053D03,
              complete sequence
          Length = 150496

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 323    cgccgccgctggcgcaggcg 342
              ||||||||||||||||||||
Sbjct: 142636 cgccgccgctggcgcaggcg 142655
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>emb|AL669951.18| Mouse DNA sequence from clone RP23-94F11 on chromosome 11 Contains three
              novel genes, a ribosomal protein L9 (Rpl9) pseudogene, a
              transcription elongation factor A (SII) 3 (Tcea3)
              pseudogene and the 3' end of the Fbxw1b gene for F-box and
              WD-40 domain protein 1B, complete sequence
          Length = 251085

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 85     aaaattcacaaagaagaacaagaa 108
              |||||||||||||||||| |||||
Sbjct: 200549 aaaattcacaaagaagaaaaagaa 200526
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>emb|AL645589.24| Mouse DNA sequence from clone RP23-289H16 on chromosome 11 Contains the
             3' end of the Vdac1 gene for voltage-dependent anion
             channel 1, a novel gene (9530068E07Rik), a
             ubiquinol-cytochrome c reductase subunit (Uqcr)
             pseudogene, a novel pseudogene, a ribosomal protein S28
             (Rps28) pseudogene and a CpG island, complete sequence
          Length = 165536

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    acatgcttcttttctgtagg 31
             ||||||||||||||||||||
Sbjct: 12000 acatgcttcttttctgtagg 12019
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>gb|AC154873.6| Mus musculus chromosome 1, clone RP23-71J17, complete sequence
          Length = 256719

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    acaaaattcacaaagaagaa 102
             ||||||||||||||||||||
Sbjct: 19830 acaaaattcacaaagaagaa 19811
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>gb|AC098682.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0004A10, from chromosome 10, complete sequence
          Length = 144271

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   cgccgccgctggcgcaggcg 342
             ||||||||||||||||||||
Sbjct: 92132 cgccgccgctggcgcaggcg 92113
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>gb|AC084197.1| Caenorhabditis elegans cosmid Y73B6BL, complete sequence
          Length = 216143

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 236   tgtaattttgctccgcccac 255
             ||||||||||||||||||||
Sbjct: 55134 tgtaattttgctccgcccac 55115
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>emb|CR407306.1| Gallus gallus finished cDNA, clone ChEST642m10
          Length = 1063

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 10  ttacatgcttcttttctgtaggaa 33
           |||||||||||||||||| |||||
Sbjct: 546 ttacatgcttcttttctggaggaa 523
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 323     cgccgccgctggcgcaggcg 342
               ||||||||||||||||||||
Sbjct: 8339114 cgccgccgctggcgcaggcg 8339133
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>gb|AF463767.1| Mus musculus strain C57BL/6J cytokine gene cluster, partial sequence
          Length = 29772

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    acatgcttcttttctgtagg 31
             ||||||||||||||||||||
Sbjct: 19259 acatgcttcttttctgtagg 19240
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>dbj|AK106038.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-D10, full
           insert sequence
          Length = 1666

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 323 cgccgccgctggcgcaggcg 342
           ||||||||||||||||||||
Sbjct: 219 cgccgccgctggcgcaggcg 238
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 323     cgccgccgctggcgcaggcg 342
               ||||||||||||||||||||
Sbjct: 8344213 cgccgccgctggcgcaggcg 8344232
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>emb|CT027657.3| Macaca mulatta chromosome 9 BAC CH250-255J18, complete sequence
          Length = 172942

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 5     aaaaattacatgcttcttttctgt 28
             |||||||| |||||||||||||||
Sbjct: 39067 aaaaattatatgcttcttttctgt 39090


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,135,687
Number of Sequences: 3902068
Number of extensions: 4135687
Number of successful extensions: 101631
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 101383
Number of HSP's gapped (non-prelim): 236
length of query: 441
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 419
effective length of database: 17,147,199,772
effective search space: 7184676704468
effective search space used: 7184676704468
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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