Clone Name | rbart56h06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | TMM28_HUMAN (O75949) Transmembrane protein 28 (TED protein) | 29 | 4.9 |
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>TMM28_HUMAN (O75949) Transmembrane protein 28 (TED protein)| Length = 473 Score = 29.3 bits (64), Expect = 4.9 Identities = 8/11 (72%), Positives = 8/11 (72%) Frame = +1 Query: 403 CCCCCWRPASS 435 CCCCCW P S Sbjct: 20 CCCCCWAPRPS 30 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,533,074 Number of Sequences: 219361 Number of extensions: 915739 Number of successful extensions: 2740 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 2596 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2739 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)