ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart56h06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
2dbj|AP005864.2| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
3dbj|AK105833.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
4dbj|AK060485.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
5emb|AL358532.11| Human DNA sequence from clone RP11-186O14 on ch... 50 0.006
6gb|AC099026.1| Drosophila melanogaster, chromosome 2R, region 49... 46 0.099
7gb|AE003818.3| Drosophila melanogaster chromosome 2R, section 32... 46 0.099
8gb|AC006422.1|AC006422 Drosophila melanogaster, chromosome 2R, r... 46 0.099
9gb|AC132347.4| Mus musculus BAC clone RP24-186F6 from chromosome... 44 0.39
10emb|AL161517.2|ATCHRIV29 Arabidopsis thaliana DNA chromosome 4, ... 44 0.39
11emb|AL049488.1|ATF24G24 Arabidopsis thaliana DNA chromosome 4, B... 44 0.39
12gb|AC027271.7| Homo sapiens BAC clone RP11-365H22 from 4, comple... 44 0.39
13gb|AC068602.2|AC068602 Genomic sequence for Arabidopsis thaliana... 44 0.39
14gb|AF096373.1|T9A4 Arabidopsis thaliana BAC T9A4 44 0.39
15emb|AL845161.5| Mouse DNA sequence from clone RP23-214I20 on chr... 44 0.39
16gb|AC110882.13| Mus musculus chromosome 18, clone RP23-287A10, c... 42 1.6
17gb|AC102429.11| Mus musculus chromosome 18, clone RP24-93K11, co... 42 1.6
18gb|AC016770.10| Homo sapiens BAC clone RP11-564H1 from 2, comple... 42 1.6
19emb|CT571265.12| Mouse DNA sequence from clone RP23-181D9 on chr... 42 1.6
20emb|AL929234.9| Mouse DNA sequence from clone RP24-225K18 on chr... 42 1.6
21gb|AC132941.21| Mus musculus chromosome 18, clone RP23-163E22, c... 40 6.1
22gb|AC168882.3| Mus musculus BAC clone RP23-80D1 from chromosome ... 40 6.1
23ref|XM_468748.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.1
24gb|AC114983.6| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
25gb|AC138290.9| Mus musculus chromosome 10, clone RP23-245C15, co... 40 6.1
26gb|AC102096.11| Mus musculus chromosome 18, clone RP23-37J18, co... 40 6.1
27ref|XM_593715.2| PREDICTED: Bos taurus similar to CG16989-PA (LO... 40 6.1
28gb|AC134871.3| Mus musculus BAC clone RP23-183L19 from chromosom... 40 6.1
29gb|AC122556.15| Mus musculus chromosome 12, clone RP24-352D3, co... 40 6.1
30gb|AC145967.3| Pan troglodytes BAC clone RP43-17M21 from 7, comp... 40 6.1
31gb|AC147100.2| Pan troglodytes BAC clone RP43-45I10 from 7, comp... 40 6.1
32gb|AC164431.2| Mus musculus BAC clone RP23-430N15 from chromosom... 40 6.1
33gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.1
34gb|AC153530.9| Mus musculus 10 BAC RP23-202A18 (Roswell Park Can... 40 6.1
35gb|AC092465.5| Homo sapiens BAC clone RP11-473L7 from 7, complet... 40 6.1
36gb|AC146375.3| Pan troglodytes BAC clone RP43-75I2 from 7, compl... 40 6.1
37emb|CT009760.5| Mouse DNA sequence from clone RP23-92K14 on chro... 40 6.1
38emb|BX601645.15| Zebrafish DNA sequence from clone CH211-207J7 i... 40 6.1
39gb|AY444343.1| Hypocrea jecorina strain QM 9414 glucose transpor... 40 6.1
40gb|AC117194.3| Mus musculus BAC clone RP23-92K11 from 12, comple... 40 6.1
41ref|XM_724073.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 6.1
42gb|AC002385.1| Homo sapiens BAC clone CTA-222A16 from 7, complet... 40 6.1
43ref|XM_675354.1| Plasmodium berghei strain ANKA Pb-reticulocyte ... 40 6.1
44emb|AL136305.14| Human DNA sequence from clone RP1-259A10 on chr... 40 6.1
45emb|AL161572.2|ATCHRIV68 Arabidopsis thaliana DNA chromosome 4, ... 40 6.1
46emb|AL035524.1|ATT13J8 Arabidopsis thaliana DNA chromosome 4, BA... 40 6.1
47gb|AC161348.2| Mus musculus chromosome 5, clone RP23-393E10, com... 40 6.1
48gb|AC091817.6| Homo sapiens chromosome 10 clone RP11-397P14, com... 40 6.1
49dbj|AK135261.1| Mus musculus 12 days embryo male wolffian duct i... 40 6.1
50gb|AC090466.5| Homo sapiens chromosome 8, clone RP11-619O19, com... 40 6.1
51emb|BX322612.8| Zebrafish DNA sequence from clone RP71-80O10 in ... 40 6.1
52emb|BX247880.13| Zebrafish DNA sequence from clone CH211-270J21 ... 40 6.1
53gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 40 6.1
54dbj|AK036251.1| Mus musculus 16 days neonate cerebellum cDNA, RI... 40 6.1
55gb|AC021546.7|AC021546 Homo sapiens chromosome 8, clone RP11-574... 40 6.1
56gb|AC004033.3| Homo sapiens Chromosome 22q11.2 PAC Clone p_m11 I... 40 6.1
57dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
58dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
59dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
60gb|AC154775.2| Mus musculus BAC clone RP23-100F7 from chromosome... 40 6.1
61gb|AC009725.12|AC009725 Mus musculus chromosome , clone CT7-388N... 40 6.1
62gb|AC104076.5| Homo sapiens BAC clone RP11-397C2 from 2, complet... 40 6.1
63gb|AC138624.4| Mus musculus BAC clone RP23-187N1 from chromosome... 40 6.1
64dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
65dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
66ref|XM_310392.2| Anopheles gambiae str. PEST ENSANGP00000018924 ... 40 6.1
67gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
68gb|AC156793.3| Mus musculus BAC clone RP24-148D3 from chromosome... 40 6.1
69emb|AL928779.3|CNS08CC9 Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.1
70emb|CT010567.11| Mouse DNA sequence from clone RP23-387D5 on chr... 40 6.1
71gb|AC134598.3| Mus musculus BAC clone RP23-175C23 from 8, comple... 40 6.1
72gb|AC145305.4| Mus musculus BAC clone RP23-129K15 from 8, comple... 40 6.1
73gb|DQ280421.1| Rhynchosporium secalis microsatellite srs13tctg s... 40 6.1
74emb|AL645477.8| Mouse DNA sequence from clone RP23-155L18 on chr... 40 6.1
75emb|AL671900.5| Mouse DNA sequence from clone RP23-282O5 on chro... 40 6.1
76emb|AL626808.28| Mouse DNA sequence from clone RP23-383I7 on chr... 40 6.1 
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                        
Query: 363      agctagaagagctcccagtcgaaccgcgggatcggcgagg 402
                ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 20193575 agctagaagagctcccaatcgaaccgcgggatcggcgagg 20193614



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 7        gaatcacatatacatgctatttttt 31
                |||||||||||||||||| ||||||
Sbjct: 20193152 gaatcacatatacatgctgtttttt 20193176
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>dbj|AP005864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0047P18
          Length = 169128

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                     
Query: 363   agctagaagagctcccagtcgaaccgcgggatcggcgagg 402
             ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 87075 agctagaagagctcccaatcgaaccgcgggatcggcgagg 87114



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 7     gaatcacatatacatgctatttttt 31
             |||||||||||||||||| ||||||
Sbjct: 86652 gaatcacatatacatgctgtttttt 86676
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>dbj|AK105833.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E09, full
            insert sequence
          Length = 2079

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                    
Query: 363  agctagaagagctcccagtcgaaccgcgggatcggcgagg 402
            ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1651 agctagaagagctcccaatcgaaccgcgggatcggcgagg 1612



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 7    gaatcacatatacatgctatttttt 31
            |||||||||||||||||| ||||||
Sbjct: 2074 gaatcacatatacatgctgtttttt 2050
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>dbj|AK060485.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D08, full
            insert sequence
          Length = 1811

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                    
Query: 363  agctagaagagctcccagtcgaaccgcgggatcggcgagg 402
            ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1383 agctagaagagctcccaatcgaaccgcgggatcggcgagg 1344



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 7    gaatcacatatacatgctatttttt 31
            |||||||||||||||||| ||||||
Sbjct: 1806 gaatcacatatacatgctgtttttt 1782
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>emb|AL358532.11| Human DNA sequence from clone RP11-186O14 on chromosome 10 Contains the
             LIPF gene for gastric lipase, the genes for two novel
             ab-hydrolase associated lipase region domain containing
             proteins and a CHC1L (chromosome condensation 1-like
             RCC1-like G exchanging factor RLG) pseudogene, complete
             sequence
          Length = 161826

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 66    aagacaccacccaccccccaccacttatt 94
             |||||||| ||||||||||||||||||||
Sbjct: 48935 aagacacctcccaccccccaccacttatt 48963
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>gb|AC099026.1| Drosophila melanogaster, chromosome 2R, region 49F-50A, BAC clone
             BACR05M17, complete sequence
          Length = 182039

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 264   ggcagagcagagcagcgcagagc 286
             |||||||||||||||||||||||
Sbjct: 23402 ggcagagcagagcagcgcagagc 23424
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>gb|AE003818.3| Drosophila melanogaster chromosome 2R, section 32 of 73 of the complete
             sequence
          Length = 291923

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 264   ggcagagcagagcagcgcagagc 286
             |||||||||||||||||||||||
Sbjct: 28906 ggcagagcagagcagcgcagagc 28884
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>gb|AC006422.1|AC006422 Drosophila melanogaster, chromosome 2R, region 50A2-50A3, P1 clones
             DS08976 and DS01149, complete sequence
          Length = 129605

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 264   ggcagagcagagcagcgcagagc 286
             |||||||||||||||||||||||
Sbjct: 69762 ggcagagcagagcagcgcagagc 69740
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>gb|AC132347.4| Mus musculus BAC clone RP24-186F6 from chromosome 13, complete sequence
          Length = 155751

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 4     tatgaatcacatatacatgcta 25
             ||||||||||||||||||||||
Sbjct: 40098 tatgaatcacatatacatgcta 40119
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>emb|AL161517.2|ATCHRIV29 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 29
          Length = 199861

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 18    acatgctattttttcatataac 39
             ||||||||||||||||||||||
Sbjct: 21360 acatgctattttttcatataac 21339
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>emb|AL049488.1|ATF24G24 Arabidopsis thaliana DNA chromosome 4, BAC clone  F24G24 (ESSA project)
          Length = 99856

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 18    acatgctattttttcatataac 39
             ||||||||||||||||||||||
Sbjct: 34692 acatgctattttttcatataac 34671
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>gb|AC027271.7| Homo sapiens BAC clone RP11-365H22 from 4, complete sequence
          Length = 177985

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 202   ggggctgggagaagaaaccatc 223
             ||||||||||||||||||||||
Sbjct: 59254 ggggctgggagaagaaaccatc 59233
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>gb|AC068602.2|AC068602 Genomic sequence for Arabidopsis thaliana BAC F14D16 from chromosome I,
             complete sequence
          Length = 87508

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 18    acatgctattttttcatataac 39
             ||||||||||||||||||||||
Sbjct: 49812 acatgctattttttcatataac 49791
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>gb|AF096373.1|T9A4 Arabidopsis thaliana BAC T9A4
          Length = 83922

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 18    acatgctattttttcatataac 39
             ||||||||||||||||||||||
Sbjct: 12249 acatgctattttttcatataac 12270
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>emb|AL845161.5| Mouse DNA sequence from clone RP23-214I20 on chromosome 2, complete
              sequence
          Length = 233212

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 72     ccacccaccccccaccacttattttt 97
              |||||||||| |||||||||||||||
Sbjct: 163090 ccacccacccaccaccacttattttt 163065
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>gb|AC110882.13| Mus musculus chromosome 18, clone RP23-287A10, complete sequence
          Length = 203782

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 28     ttttcatataacttgtgccat 48
              |||||||||||||||||||||
Sbjct: 180356 ttttcatataacttgtgccat 180376
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>gb|AC102429.11| Mus musculus chromosome 18, clone RP24-93K11, complete sequence
          Length = 216331

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 28   ttttcatataacttgtgccat 48
            |||||||||||||||||||||
Sbjct: 2626 ttttcatataacttgtgccat 2646
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>gb|AC016770.10| Homo sapiens BAC clone RP11-564H1 from 2, complete sequence
          Length = 191919

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 227   gaaaaggaaagaataaacaga 247
             |||||||||||||||||||||
Sbjct: 13933 gaaaaggaaagaataaacaga 13913
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>emb|CT571265.12| Mouse DNA sequence from clone RP23-181D9 on chromosome 14, complete
             sequence
          Length = 206513

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 263   gggcagagcagagcagcgcag 283
             |||||||||||||||||||||
Sbjct: 36984 gggcagagcagagcagcgcag 37004
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>emb|AL929234.9| Mouse DNA sequence from clone RP24-225K18 on chromosome 11, complete
              sequence
          Length = 168500

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 266    cagagcagagcagcgcagagc 286
              |||||||||||||||||||||
Sbjct: 108948 cagagcagagcagcgcagagc 108968
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>gb|AC132941.21| Mus musculus chromosome 18, clone RP23-163E22, complete sequence
          Length = 182073

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 232    ggaaagaataaacagacgga 251
              ||||||||||||||||||||
Sbjct: 136329 ggaaagaataaacagacgga 136348
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>gb|AC168882.3| Mus musculus BAC clone RP23-80D1 from chromosome 9, complete sequence
          Length = 210475

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 263    gggcagagcagagcagcgcagagc 286
              |||||||||||||||| |||||||
Sbjct: 113869 gggcagagcagagcagagcagagc 113846
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>ref|XM_468748.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1470

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 425  cggcttcgtcgtggtggtcgcggc 448
            |||||||||||||||||| |||||
Sbjct: 1103 cggcttcgtcgtggtggtggcggc 1126
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>gb|AC114983.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0032H19
             map E30331S, complete sequence
          Length = 164820

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 425   cggcttcgtcgtggtggtcgcggc 448
             |||||||||||||||||| |||||
Sbjct: 62421 cggcttcgtcgtggtggtggcggc 62444
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>gb|AC138290.9| Mus musculus chromosome 10, clone RP23-245C15, complete sequence
          Length = 151470

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 265   gcagagcagagcagcgcagagcga 288
             |||||||||||||| |||||||||
Sbjct: 30369 gcagagcagagcagagcagagcga 30392
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>gb|AC102096.11| Mus musculus chromosome 18, clone RP23-37J18, complete sequence
          Length = 180965

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 232   ggaaagaataaacagacgga 251
             ||||||||||||||||||||
Sbjct: 10931 ggaaagaataaacagacgga 10950
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>ref|XM_593715.2| PREDICTED: Bos taurus similar to CG16989-PA (LOC515657), mRNA
          Length = 3811

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 362 cagctagaagagctcccagt 381
           ||||||||||||||||||||
Sbjct: 793 cagctagaagagctcccagt 774
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>gb|AC134871.3| Mus musculus BAC clone RP23-183L19 from chromosome 3, complete sequence
          Length = 193373

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 263   gggcagagcagagcagcgcagagc 286
             |||||||||||||||| |||||||
Sbjct: 94062 gggcagagcagagcagagcagagc 94085
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>gb|AC122556.15| Mus musculus chromosome 12, clone RP24-352D3, complete sequence
          Length = 167088

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 303   agaaagaagaaaccaagctg 322
             ||||||||||||||||||||
Sbjct: 12951 agaaagaagaaaccaagctg 12970
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>gb|AC145967.3| Pan troglodytes BAC clone RP43-17M21 from 7, complete sequence
          Length = 179148

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 224    gaggaaaaggaaagaataaa 243
              ||||||||||||||||||||
Sbjct: 146299 gaggaaaaggaaagaataaa 146318
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>gb|AC147100.2| Pan troglodytes BAC clone RP43-45I10 from 7, complete sequence
          Length = 150235

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   gaggaaaaggaaagaataaa 243
             ||||||||||||||||||||
Sbjct: 30913 gaggaaaaggaaagaataaa 30894
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>gb|AC164431.2| Mus musculus BAC clone RP23-430N15 from chromosome 17, complete
             sequence
          Length = 190724

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 262   tgggcagagcagagcagcgcagag 285
             ||||||||||||||||| ||||||
Sbjct: 48557 tgggcagagcagagcagagcagag 48580
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 425      cggcttcgtcgtggtggtcgcggc 448
                |||||||||||||||||| |||||
Sbjct: 17501322 cggcttcgtcgtggtggtggcggc 17501299
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>gb|AC153530.9| Mus musculus 10 BAC RP23-202A18 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 192392

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    tattttttcatataacttgt 43
             ||||||||||||||||||||
Sbjct: 80516 tattttttcatataacttgt 80497
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>gb|AC092465.5| Homo sapiens BAC clone RP11-473L7 from 7, complete sequence
          Length = 188158

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   gaggaaaaggaaagaataaa 243
             ||||||||||||||||||||
Sbjct: 75644 gaggaaaaggaaagaataaa 75663
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>gb|AC146375.3| Pan troglodytes BAC clone RP43-75I2 from 7, complete sequence
          Length = 205242

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   gaggaaaaggaaagaataaa 243
             ||||||||||||||||||||
Sbjct: 78527 gaggaaaaggaaagaataaa 78508
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>emb|CT009760.5| Mouse DNA sequence from clone RP23-92K14 on chromosome 16, complete
             sequence
          Length = 212227

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 263   gggcagagcagagcagcgcagagc 286
             |||||||||||||||| |||||||
Sbjct: 89077 gggcagagcagagcagagcagagc 89100
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>emb|BX601645.15| Zebrafish DNA sequence from clone CH211-207J7 in linkage group 6,
              complete sequence
          Length = 223513

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     atgctattttttcatataac 39
              ||||||||||||||||||||
Sbjct: 136136 atgctattttttcatataac 136155
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>gb|AY444343.1| Hypocrea jecorina strain QM 9414 glucose transporter (hxt1) gene,
            complete cds
          Length = 6750

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 263  gggcagagcagagcagcgcagagc 286
            |||||||||||||||| |||||||
Sbjct: 3739 gggcagagcagagcagggcagagc 3716
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>gb|AC117194.3| Mus musculus BAC clone RP23-92K11 from 12, complete sequence
          Length = 204913

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 303   agaaagaagaaaccaagctg 322
             ||||||||||||||||||||
Sbjct: 23244 agaaagaagaaaccaagctg 23225
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>ref|XM_724073.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00140)
           partial mRNA
          Length = 774

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 10  tcacatatacatgctatttt 29
           ||||||||||||||||||||
Sbjct: 242 tcacatatacatgctatttt 223
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>gb|AC002385.1| Homo sapiens BAC clone CTA-222A16 from 7, complete sequence
          Length = 201990

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   gaggaaaaggaaagaataaa 243
             ||||||||||||||||||||
Sbjct: 20373 gaggaaaaggaaagaataaa 20354
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>ref|XM_675354.1| Plasmodium berghei strain ANKA Pb-reticulocyte binding protein
           (PB001538.02.0) partial mRNA
          Length = 774

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 10  tcacatatacatgctatttt 29
           ||||||||||||||||||||
Sbjct: 242 tcacatatacatgctatttt 223
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>emb|AL136305.14| Human DNA sequence from clone RP1-259A10 on chromosome 6p22.1-23 Contains
              the gene for an ssDNA binding protein and a CpG island,
              complete sequence
          Length = 150520

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 84     caccacttatttttctgcac 103
              ||||||||||||||||||||
Sbjct: 100437 caccacttatttttctgcac 100418
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>emb|AL161572.2|ATCHRIV68 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 68
          Length = 199749

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 293   tggatgcacgagaaagaaga 312
             ||||||||||||||||||||
Sbjct: 55246 tggatgcacgagaaagaaga 55227
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>emb|AL035524.1|ATT13J8 Arabidopsis thaliana DNA chromosome 4, BAC clone T13J8 (ESSAII project)
          Length = 83693

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 293   tggatgcacgagaaagaaga 312
             ||||||||||||||||||||
Sbjct: 50110 tggatgcacgagaaagaaga 50091
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>gb|AC161348.2| Mus musculus chromosome 5, clone RP23-393E10, complete sequence
          Length = 221768

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 303    agaaagaagaaaccaagctg 322
              ||||||||||||||||||||
Sbjct: 121593 agaaagaagaaaccaagctg 121612
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>gb|AC091817.6| Homo sapiens chromosome 10 clone RP11-397P14, complete sequence
          Length = 177908

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 73     cacccaccccccaccacttatttt 96
              |||||||||||||||| |||||||
Sbjct: 109693 cacccaccccccaccagttatttt 109716
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>dbj|AK135261.1| Mus musculus 12 days embryo male wolffian duct includes surrounding
            region cDNA, RIKEN full-length enriched library,
            clone:6720449B21 product:NADPH cytochrome B5
            oxidoreductase, full insert sequence
          Length = 3833

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 263  gggcagagcagagcagcgcagagc 286
            |||||||||||||||| |||||||
Sbjct: 1754 gggcagagcagagcagagcagagc 1731
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>gb|AC090466.5| Homo sapiens chromosome 8, clone RP11-619O19, complete sequence
          Length = 191049

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 ggaaaaggaaagaataaaca 245
           ||||||||||||||||||||
Sbjct: 134 ggaaaaggaaagaataaaca 115
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>emb|BX322612.8| Zebrafish DNA sequence from clone RP71-80O10 in linkage group 23,
              complete sequence
          Length = 158403

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 264    ggcagagcagagcagcgcagagcg 287
              ||||||||||||||| ||||||||
Sbjct: 110239 ggcagagcagagcagagcagagcg 110216
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>emb|BX247880.13| Zebrafish DNA sequence from clone CH211-270J21 in linkage group 7,
             complete sequence
          Length = 141643

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    aaaaatccttcacattaaga 69
             ||||||||||||||||||||
Sbjct: 50482 aaaaatccttcacattaaga 50501
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>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 15      tatacatgctattttttcat 34
               ||||||||||||||||||||
Sbjct: 5371694 tatacatgctattttttcat 5371675
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>dbj|AK036251.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:9630048K15 product:thyroid
            stimulating hormone, beta subunit, full insert sequence
          Length = 4401

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 263  gggcagagcagagcagcgcagagc 286
            |||||||||||||||| |||||||
Sbjct: 1832 gggcagagcagagcagagcagagc 1809
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>gb|AC021546.7|AC021546 Homo sapiens chromosome 8, clone RP11-574O7, complete sequence
          Length = 207756

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 226   ggaaaaggaaagaataaaca 245
             ||||||||||||||||||||
Sbjct: 54454 ggaaaaggaaagaataaaca 54473
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>gb|AC004033.3| Homo sapiens Chromosome 22q11.2 PAC Clone p_m11 In BCRL2-GGT Region,
             complete sequence
          Length = 145356

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 303   agaaagaagaaaccaagctg 322
             ||||||||||||||||||||
Sbjct: 80855 agaaagaagaaaccaagctg 80874
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 260     tctgggcagagcagagcagcgcag 283
               ||||||||||||||||||| ||||
Sbjct: 9756923 tctgggcagagcagagcagagcag 9756900
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 264      ggcagagcagagcagcgcag 283
                ||||||||||||||||||||
Sbjct: 25687363 ggcagagcagagcagcgcag 25687382
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 425      cggcttcgtcgtggtggtcgcggc 448
                |||||||||||||||||| |||||
Sbjct: 17494863 cggcttcgtcgtggtggtggcggc 17494840
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>gb|AC154775.2| Mus musculus BAC clone RP23-100F7 from chromosome 16, complete sequence
          Length = 192492

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 263    gggcagagcagagcagcgcagagc 286
              |||||||||||||||| |||||||
Sbjct: 156919 gggcagagcagagcagagcagagc 156942
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>gb|AC009725.12|AC009725 Mus musculus chromosome , clone CT7-388N17, complete sequence
          Length = 145152

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 263   gggcagagcagagcagcgcagagc 286
             |||||||||||||||| |||||||
Sbjct: 43850 gggcagagcagagcagagcagagc 43827
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>gb|AC104076.5| Homo sapiens BAC clone RP11-397C2 from 2, complete sequence
          Length = 174622

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   gaggaaaaggaaagaataaa 243
             ||||||||||||||||||||
Sbjct: 15848 gaggaaaaggaaagaataaa 15867
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>gb|AC138624.4| Mus musculus BAC clone RP23-187N1 from chromosome 7, complete sequence
          Length = 226264

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 263    gggcagagcagagcagcgcagagc 286
              |||||||||||||||| |||||||
Sbjct: 138418 gggcagagcagagcagggcagagc 138395
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>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0594D10
          Length = 143200

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 264    ggcagagcagagcagcgcag 283
              ||||||||||||||||||||
Sbjct: 141336 ggcagagcagagcagcgcag 141355
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>dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0524E08
          Length = 154696

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 264  ggcagagcagagcagcgcag 283
            ||||||||||||||||||||
Sbjct: 4525 ggcagagcagagcagcgcag 4544
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>ref|XM_310392.2| Anopheles gambiae str. PEST ENSANGP00000018924
           (ENSANGG00000016435), partial mRNA
          Length = 682

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 217 aaccatcgaggaaaaggaaa 236
           ||||||||||||||||||||
Sbjct: 499 aaccatcgaggaaaaggaaa 518
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 260     tctgggcagagcagagcagcgcag 283
               ||||||||||||||||||| ||||
Sbjct: 9756808 tctgggcagagcagagcagagcag 9756785
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>gb|AC156793.3| Mus musculus BAC clone RP24-148D3 from chromosome 9, complete sequence
          Length = 198338

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 263   gggcagagcagagcagcgcagagc 286
             |||||||||||||||| |||||||
Sbjct: 19629 gggcagagcagagcagagcagagc 19652
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>emb|AL928779.3|CNS08CC9 Oryza sativa chromosome 12, . BAC OSJNBa0054I14 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 148089

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 260   tctgggcagagcagagcagcgcag 283
             ||||||||||||||||||| ||||
Sbjct: 82880 tctgggcagagcagagcagagcag 82857
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>emb|CT010567.11| Mouse DNA sequence from clone RP23-387D5 on chromosome 16, complete
             sequence
          Length = 178874

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 263   gggcagagcagagcagcgcagagc 286
             |||||||||||||||| |||||||
Sbjct: 91298 gggcagagcagagcagagcagagc 91275
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>gb|AC134598.3| Mus musculus BAC clone RP23-175C23 from 8, complete sequence
          Length = 205622

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   gaggaaaaggaaagaataaa 243
             ||||||||||||||||||||
Sbjct: 76263 gaggaaaaggaaagaataaa 76244
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>gb|AC145305.4| Mus musculus BAC clone RP23-129K15 from 8, complete sequence
          Length = 196153

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 64     ttaagacaccacccaccccccacc 87
              |||||||||||||| |||||||||
Sbjct: 142670 ttaagacaccaccccccccccacc 142647
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>gb|DQ280421.1| Rhynchosporium secalis microsatellite srs13tctg sequence
          Length = 108

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 263 gggcagagcagagcagcgcagagc 286
           |||||||||||||||| |||||||
Sbjct: 47  gggcagagcagagcagagcagagc 24
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>emb|AL645477.8| Mouse DNA sequence from clone RP23-155L18 on chromosome X, complete
             sequence
          Length = 189131

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    ccaccccccaccacttattt 95
             ||||||||||||||||||||
Sbjct: 73748 ccaccccccaccacttattt 73767
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>emb|AL671900.5| Mouse DNA sequence from clone RP23-282O5 on chromosome X, complete
              sequence
          Length = 185389

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 72     ccacccaccccccaccacttattt 95
              |||||| |||||||||||||||||
Sbjct: 150362 ccaccctccccccaccacttattt 150385
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>emb|AL626808.28| Mouse DNA sequence from clone RP23-383I7 on chromosome 4, complete
             sequence
          Length = 203992

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 263   gggcagagcagagcagcgcagagc 286
             |||||||||||||||| |||||||
Sbjct: 33342 gggcagagcagagcagagcagagc 33319


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,674,655
Number of Sequences: 3902068
Number of extensions: 4674655
Number of successful extensions: 106389
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106044
Number of HSP's gapped (non-prelim): 329
length of query: 455
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 433
effective length of database: 17,147,199,772
effective search space: 7424737501276
effective search space used: 7424737501276
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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