Clone Information

BLAST Search Result

Clone Name	rbart56h03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RS4_MAIZE (O22424) 40S ribosomal protein S4	158	7e-39
2	RS4_SOLTU (P46300) 40S ribosomal protein S4	154	1e-37
3	RS4_PRUAR (O81363) 40S ribosomal protein S4	154	1e-37
4	RS4_GOSHI (P46299) 40S ribosomal protein S4	151	9e-37
5	RS4_ARATH (P49204) 40S ribosomal protein S4	149	5e-36
6	RS4_ORYSA (P49398) 40S ribosomal protein S4 (SCAR protein SS620)	97	2e-30
7	RS4X_MONDO (O62738) 40S ribosomal protein S4, X isoform	125	7e-29
8	RS4_XENTR (Q6PBC4) 40S ribosomal protein S4	124	1e-28
9	RS4_XENLA (P49401) 40S ribosomal protein S4	124	1e-28
10	RS4_CRIGR (P47961) 40S ribosomal protein S4	124	1e-28
11	RS4_CHICK (P47836) 40S ribosomal protein S4	124	1e-28
12	RS4X_RAT (P62703) 40S ribosomal protein S4, X isoform	124	1e-28
13	RS4X_MOUSE (P62702) 40S ribosomal protein S4, X isoform	124	1e-28
14	RS4X_MESAU (P62704) 40S ribosomal protein S4, X isoform	124	1e-28
15	RS4X_MACFU (Q76MY1) 40S ribosomal protein S4, X isoform	124	1e-28
16	RS4X_HUMAN (P62701) 40S ribosomal protein S4, X isoform (Single ...	124	1e-28
17	RS4X_FELCA (P62705) 40S ribosomal protein S4, X isoform	124	1e-28
18	RS4X_CERAE (Q76N24) 40S ribosomal protein S4, X isoform	124	1e-28
19	RS4Y1_MONDO (O62739) 40S ribosomal protein S4, Y isoform 1	123	3e-28
20	RS4X_BRARE (Q642H9) 40S ribosomal protein S4, X isoform	121	1e-27
21	RS4_ICTPU (Q90YS0) 40S ribosomal protein S4	119	4e-27
22	RS4Y1_HUMAN (P22090) 40S ribosomal protein S4, Y isoform 1	118	1e-26
23	RS4Y1_PONPY (Q861U7) 40S ribosomal protein S4, Y isoform 1	117	1e-26
24	RS4Y1_GORGO (Q861U8) 40S ribosomal protein S4, Y isoform 1	117	2e-26
25	RS4Y1_PANTR (Q861U9) 40S ribosomal protein S4, Y isoform 1	115	6e-26
26	RS4Y1_PANPA (Q861V0) 40S ribosomal protein S4, Y isoform 1	115	6e-26
27	RS4Y1_MACFU (P79183) 40S ribosomal protein S4, Y isoform 1	115	1e-25
28	RS4Y2_HUMAN (Q8TD47) 40S ribosomal protein S4, Y isoform 2	113	3e-25
29	RS4_DROME (P41042) 40S ribosomal protein S4	113	4e-25
30	RS4Y2_PANTR (Q6GVM7) 40S ribosomal protein S4, Y isoform 2	112	5e-25
31	RS4B_SCHPO (Q9USW5) 40S ribosomal protein S4-B	111	1e-24
32	RS4C_SCHPO (Q9P4W9) 40S ribosomal protein S4-C	110	2e-24
33	RS4A_SCHPO (P87158) 40S ribosomal protein S4-A	110	2e-24
34	RS4_YARLI (O59950) 40S ribosomal protein S4 (S7)	102	8e-22
35	RS4_YEAST (P05753) 40S ribosomal protein S4 (S7) (YS6) (RP5)	101	1e-21
36	RS4_CANAL (P47837) 40S ribosomal protein S4 (S7)	100	4e-21
37	RS4_DICDI (P51405) 40S ribosomal protein S4	92	1e-18
38	RS4_CAEEL (Q9N3X2) 40S ribosomal protein S4	90	3e-18
39	RS4_HORSE (P55832) 40S ribosomal protein S4 (Fragment)	62	1e-09
40	RS4_BOVIN (P79103) 40S ribosomal protein S4 (Fragment)	62	1e-09
41	FOSB_BACLD (Q65KJ5) Metallothiol transferase fosB (EC 2.5.1.-) (...	33	0.36
42	YDVG_SCHPO (O14232) Putative helicase C6F12.16c (EC 3.6.1.-)	33	0.47
43	Y977_HAEDU (Q7VMJ8) UPF0078 membrane protein HD_0977	31	1.8
44	LEU1_SOYBN (Q39891) Probable 2-isopropylmalate synthase (EC 2.3....	31	2.4
45	YCGV_ECO57 (Q8X583) Hypothetical protein ycgV	30	4.0
46	RS4_CHLS6 (Q40941) 40S ribosomal protein S4	30	4.0
47	MRAW_BACHK (Q6HEP6) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)	30	5.3

>RS4_MAIZE (O22424) 40S ribosomal protein S4|
          Length = 265

 Score =  158 bits (400), Expect = 7e-39
 Identities = 79/103 (76%), Positives = 84/103 (81%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IKANDTIK+DLETNKIVDFIKFD                 VIKNREKHKG+FETIHVED+
Sbjct: 154 IKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDS 213

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKRD 215
            GHQFATR+GNVFTIGKG KPWVSLPKGKGIKL+IIEEQRKRD
Sbjct: 214 LGHQFATRMGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRKRD 256

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>RS4_SOLTU (P46300) 40S ribosomal protein S4|
          Length = 264

 Score =  154 bits (389), Expect = 1e-37
 Identities = 75/102 (73%), Positives = 84/102 (82%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IKANDTIKLDLE+NKIVDFIKFD                 VIKNREKHKG+FET+H++D+
Sbjct: 154 IKANDTIKLDLESNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETLHIQDS 213

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
           QGH+FATRLGNVFT+GKGTKPWVSLPKGKGIKLTIIE+ RKR
Sbjct: 214 QGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLTIIEDARKR 255

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>RS4_PRUAR (O81363) 40S ribosomal protein S4|
          Length = 261

 Score =  154 bits (389), Expect = 1e-37
 Identities = 77/102 (75%), Positives = 82/102 (80%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IKANDTIKLDLETNKI DFIKFD                 VIKNREKHKG+FETIHV+DA
Sbjct: 150 IKANDTIKLDLETNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDA 209

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
            GH+FATRLGNVFTIGKGTKPWVSLPKGKGIKLTI+EE +KR
Sbjct: 210 TGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTILEEAKKR 251

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>RS4_GOSHI (P46299) 40S ribosomal protein S4|
          Length = 262

 Score =  151 bits (382), Expect = 9e-37
 Identities = 77/102 (75%), Positives = 82/102 (80%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IKANDTIKLDLE+NKIVDFIKFD                 VIKNREKHKG+FETIHV+DA
Sbjct: 154 IKANDTIKLDLESNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDA 213

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
            GH+FATRLGNVFTIGKGTKPWVSLPK KGIKL+IIEE RKR
Sbjct: 214 AGHEFATRLGNVFTIGKGTKPWVSLPKRKGIKLSIIEEARKR 255

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>RS4_ARATH (P49204) 40S ribosomal protein S4|
          Length = 262

 Score =  149 bits (376), Expect = 5e-36
 Identities = 74/102 (72%), Positives = 81/102 (79%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IK NDTIKLDLE NKIV+FIKFD                 VIKNREKHKG+FETIH++D+
Sbjct: 154 IKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDS 213

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
            GH+FATRLGNV+TIGKGTKPWVSLPKGKGIKLTIIEE RKR
Sbjct: 214 TGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKR 255

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>RS4_ORYSA (P49398) 40S ribosomal protein S4 (SCAR protein SS620)|
          Length = 268

 Score = 96.7 bits (239), Expect(2) = 2e-30
 Identities = 45/49 (91%), Positives = 47/49 (95%)
 Frame = -2

Query: 379 KGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIE 233
           KG+FETIHVEDA GHQFATRLGNVFTIGKG KPWVSLPKGKGIKL+IIE
Sbjct: 205 KGSFETIHVEDALGHQFATRLGNVFTIGKGNKPWVSLPKGKGIKLSIIE 253



 Score = 55.5 bits (132), Expect(2) = 2e-30
 Identities = 26/49 (53%), Positives = 33/49 (67%)
 Frame = -1

Query: 518 GQRHHQARPGDQQDC*LHQVXXXXXRHGDWWAQHWACWCDQEQGEA*GN 372
           G+RH+Q R GDQQ+  LHQ       HGD W ++ A WCDQ+QGEA G+
Sbjct: 160 GKRHNQDRSGDQQELRLHQGLMLAMCHGD-WRRNTAVWCDQQQGEAKGS 207

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>RS4X_MONDO (O62738) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score =  125 bits (314), Expect = 7e-29
 Identities = 60/102 (58%), Positives = 72/102 (70%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IK NDTI++DLET KI DFIKFD                 VI NREKH G+F+ +HV+DA
Sbjct: 153 IKMNDTIQIDLETGKITDFIKFDTGNMCMVTGGANLGRIGVITNREKHPGSFDVVHVKDA 212

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
            G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 213 NGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254

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>RS4_XENTR (Q6PBC4) 40S ribosomal protein S4|
          Length = 262

 Score =  124 bits (312), Expect = 1e-28
 Identities = 59/102 (57%), Positives = 72/102 (70%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IK NDTI++DLET KI DFIKFD                 VI NRE+H G+F+ +HV+DA
Sbjct: 153 IKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDA 212

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
            G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 213 NGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254

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>RS4_XENLA (P49401) 40S ribosomal protein S4|
          Length = 262

 Score =  124 bits (312), Expect = 1e-28
 Identities = 59/102 (57%), Positives = 72/102 (70%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IK NDTI++DLET KI DFIKFD                 VI NRE+H G+F+ +HV+DA
Sbjct: 153 IKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDA 212

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
            G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 213 NGNNFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254

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>RS4_CRIGR (P47961) 40S ribosomal protein S4|
          Length = 262

 Score =  124 bits (312), Expect = 1e-28
 Identities = 59/102 (57%), Positives = 72/102 (70%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IK NDTI++DLET KI DFIKFD                 VI NRE+H G+F+ +HV+DA
Sbjct: 153 IKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDA 212

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
            G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 213 NGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254

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>RS4_CHICK (P47836) 40S ribosomal protein S4|
          Length = 262

 Score =  124 bits (312), Expect = 1e-28
 Identities = 59/102 (57%), Positives = 72/102 (70%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IK NDTI++DLET KI DFIKFD                 VI NRE+H G+F+ +HV+DA
Sbjct: 153 IKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDA 212

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
            G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 213 NGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254

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>RS4X_RAT (P62703) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score =  124 bits (312), Expect = 1e-28
 Identities = 59/102 (57%), Positives = 72/102 (70%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IK NDTI++DLET KI DFIKFD                 VI NRE+H G+F+ +HV+DA
Sbjct: 153 IKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDA 212

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
            G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 213 NGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254

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>RS4X_MOUSE (P62702) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score =  124 bits (312), Expect = 1e-28
 Identities = 59/102 (57%), Positives = 72/102 (70%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IK NDTI++DLET KI DFIKFD                 VI NRE+H G+F+ +HV+DA
Sbjct: 153 IKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDA 212

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
            G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 213 NGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254

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>RS4X_MESAU (P62704) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score =  124 bits (312), Expect = 1e-28
 Identities = 59/102 (57%), Positives = 72/102 (70%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IK NDTI++DLET KI DFIKFD                 VI NRE+H G+F+ +HV+DA
Sbjct: 153 IKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDA 212

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
            G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 213 NGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254

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>RS4X_MACFU (Q76MY1) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score =  124 bits (312), Expect = 1e-28
 Identities = 59/102 (57%), Positives = 72/102 (70%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IK NDTI++DLET KI DFIKFD                 VI NRE+H G+F+ +HV+DA
Sbjct: 153 IKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDA 212

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
            G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 213 NGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254

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>RS4X_HUMAN (P62701) 40S ribosomal protein S4, X isoform (Single copy abundant|
           mRNA protein) (SCR10)
          Length = 262

 Score =  124 bits (312), Expect = 1e-28
 Identities = 59/102 (57%), Positives = 72/102 (70%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IK NDTI++DLET KI DFIKFD                 VI NRE+H G+F+ +HV+DA
Sbjct: 153 IKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDA 212

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
            G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 213 NGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254

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>RS4X_FELCA (P62705) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score =  124 bits (312), Expect = 1e-28
 Identities = 59/102 (57%), Positives = 72/102 (70%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IK NDTI++DLET KI DFIKFD                 VI NRE+H G+F+ +HV+DA
Sbjct: 153 IKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDA 212

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
            G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 213 NGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254

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>RS4X_CERAE (Q76N24) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score =  124 bits (312), Expect = 1e-28
 Identities = 59/102 (57%), Positives = 72/102 (70%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IK NDTI++DLET KI DFIKFD                 VI NRE+H G+F+ +HV+DA
Sbjct: 153 IKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDA 212

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
            G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 213 NGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254

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>RS4Y1_MONDO (O62739) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score =  123 bits (309), Expect = 3e-28
 Identities = 58/102 (56%), Positives = 72/102 (70%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IK NDT++++LET KI DFIKFD                 VI NREKH G+F+ +HV+DA
Sbjct: 153 IKVNDTVQINLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNREKHPGSFDVVHVKDA 212

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
            G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 213 NGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254

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>RS4X_BRARE (Q642H9) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score =  121 bits (303), Expect = 1e-27
 Identities = 57/102 (55%), Positives = 72/102 (70%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IK NDTI++DL+T KI DFIKF+                 VI NREKH G+F+ +HV+D+
Sbjct: 153 IKVNDTIRIDLDTGKITDFIKFETGNMCMVTGGANLGRIGVITNREKHPGSFDVVHVKDS 212

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
            G+ FATRL N+F IGKG KPWVSLP+GKG++LTI EE+ KR
Sbjct: 213 IGNSFATRLSNIFVIGKGNKPWVSLPRGKGVRLTIAEERDKR 254

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>RS4_ICTPU (Q90YS0) 40S ribosomal protein S4|
          Length = 262

 Score =  119 bits (299), Expect = 4e-27
 Identities = 56/102 (54%), Positives = 72/102 (70%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IKANDT+++DLET KI +FIKFD                 VI NRE+H G+F+ +HV+D+
Sbjct: 153 IKANDTVRIDLETGKITEFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDS 212

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
            G+ FATRL N+F IGKG K WVS+P+GKGI+LTI EE+ KR
Sbjct: 213 TGNSFATRLSNIFVIGKGNKAWVSIPRGKGIRLTIAEERDKR 254

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>RS4Y1_HUMAN (P22090) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score =  118 bits (295), Expect = 1e-26
 Identities = 54/102 (52%), Positives = 71/102 (69%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IK NDT+++DL T KI++FIKFD                 VI NRE+H G+F+ +HV+DA
Sbjct: 153 IKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDA 212

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
            G+ FATRL N+F IG G KPW+SLP+GKGI+LT+ EE+ KR
Sbjct: 213 NGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAEERDKR 254

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>RS4Y1_PONPY (Q861U7) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score =  117 bits (294), Expect = 1e-26
 Identities = 54/102 (52%), Positives = 71/102 (69%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IK NDT+++DL T KI++FIKFD                 VI NRE+H G+F+ +HV+DA
Sbjct: 153 IKVNDTVQIDLGTGKIINFIKFDTGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDA 212

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
            G+ FATR+ N+F IG G KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 213 NGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKR 254

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>RS4Y1_GORGO (Q861U8) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score =  117 bits (293), Expect = 2e-26
 Identities = 53/102 (51%), Positives = 71/102 (69%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IK NDT+++DL T KI++FIKFD                 VI NRE+H G+F+ +HV+DA
Sbjct: 153 IKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDA 212

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
            G+ FATR+ N+F IG G KPW+SLP+GKGI+LT+ EE+ KR
Sbjct: 213 NGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTVAEERDKR 254

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>RS4Y1_PANTR (Q861U9) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score =  115 bits (289), Expect = 6e-26
 Identities = 53/102 (51%), Positives = 70/102 (68%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IK NDT+++DL T KI++FIKFD                 VI NRE+H G+F+ +HV+DA
Sbjct: 153 IKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDA 212

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
            G+ FATRL N+F IG G KPW+SLP+GKGI+LT+  E+ KR
Sbjct: 213 NGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAAERDKR 254

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>RS4Y1_PANPA (Q861V0) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score =  115 bits (289), Expect = 6e-26
 Identities = 53/102 (51%), Positives = 70/102 (68%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IK NDT+++DL T KI++FIKFD                 VI NRE+H G+F+ +HV+DA
Sbjct: 153 IKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDA 212

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
            G+ FATRL N+F IG G KPW+SLP+GKGI+LT+  E+ KR
Sbjct: 213 NGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAAERDKR 254

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>RS4Y1_MACFU (P79183) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score =  115 bits (287), Expect = 1e-25
 Identities = 53/102 (51%), Positives = 69/102 (67%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IK NDT+++DL + KI  FIKFD                 VI NRE+H G+F+ +HV+DA
Sbjct: 153 IKVNDTVRIDLGSGKITSFIKFDTGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDA 212

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
            G+ FATR+ N+F IG G KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 213 SGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKR 254

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>RS4Y2_HUMAN (Q8TD47) 40S ribosomal protein S4, Y isoform 2|
          Length = 262

 Score =  113 bits (283), Expect = 3e-25
 Identities = 53/102 (51%), Positives = 68/102 (66%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IK NDT+++DL T KI  FIKFD                 VI NRE+H G+ + +HV+DA
Sbjct: 153 IKVNDTVQIDLGTGKITSFIKFDTGNVCMVIAGANLGRVGVITNRERHPGSCDVVHVKDA 212

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
            G+ FATR+ N+F IG G KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 213 NGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKR 254

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>RS4_DROME (P41042) 40S ribosomal protein S4|
          Length = 261

 Score =  113 bits (282), Expect = 4e-25
 Identities = 51/102 (50%), Positives = 71/102 (69%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           I AND++++D+ + KI D+IKFD                  + NRE+H G+F+ +H++D+
Sbjct: 154 IHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDS 213

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
           QGH FATRL NVF IGKG KP++SLPKGKG+KL+I EE+ KR
Sbjct: 214 QGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLSIAEERDKR 255

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>RS4Y2_PANTR (Q6GVM7) 40S ribosomal protein S4, Y isoform 2|
          Length = 262

 Score =  112 bits (281), Expect = 5e-25
 Identities = 52/102 (50%), Positives = 68/102 (66%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IK NDT+++DL T KI  FIKFD                 V+ NRE+H G+ + +HV+DA
Sbjct: 153 IKVNDTVQIDLGTGKITSFIKFDTGNVCMVIGGANLGRVGVVTNRERHPGSCDVVHVKDA 212

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
            G+ FATR+ N+F IG G KPW+SLP+GKGI+LTI EE+ KR
Sbjct: 213 NGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKR 254

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>RS4B_SCHPO (Q9USW5) 40S ribosomal protein S4-B|
          Length = 262

 Score =  111 bits (278), Expect = 1e-24
 Identities = 56/102 (54%), Positives = 67/102 (65%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IK NDTIKL+LETNKI  FIKFD                  I +RE H G+FE IHV+DA
Sbjct: 154 IKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDA 213

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
              +FATRL NVF IG+  K W+SLPKGKG+KL+I EE+ +R
Sbjct: 214 LDREFATRLSNVFVIGEAGKSWISLPKGKGVKLSITEERDRR 255

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>RS4C_SCHPO (Q9P4W9) 40S ribosomal protein S4-C|
          Length = 262

 Score =  110 bits (276), Expect = 2e-24
 Identities = 56/102 (54%), Positives = 67/102 (65%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IK NDTIKL+LETNKI  FIKFD                  I +RE H G+FE IHV+DA
Sbjct: 154 IKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDA 213

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
              +FATRL NVF IG+  K W+SLPKGKG+KL+I EE+ +R
Sbjct: 214 LDREFATRLSNVFVIGETGKSWISLPKGKGVKLSITEERDRR 255

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>RS4A_SCHPO (P87158) 40S ribosomal protein S4-A|
          Length = 262

 Score =  110 bits (276), Expect = 2e-24
 Identities = 56/102 (54%), Positives = 67/102 (65%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IK NDTIKL+LETNKI  FIKFD                  I +RE H G+FE IHV+DA
Sbjct: 154 IKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDA 213

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
              +FATRL NVF IG+  K W+SLPKGKG+KL+I EE+ +R
Sbjct: 214 LDREFATRLSNVFVIGETGKSWISLPKGKGVKLSITEERDRR 255

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>RS4_YARLI (O59950) 40S ribosomal protein S4 (S7)|
          Length = 260

 Score =  102 bits (253), Expect = 8e-22
 Identities = 49/102 (48%), Positives = 65/102 (63%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IK NDT+K+DL T KI  F+KF+                  I +RE+H+G F+ +H++DA
Sbjct: 154 IKVNDTVKIDLATGKITSFVKFENGNIVMTTGGRNMGRVGTITHRERHEGGFDIVHIKDA 213

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
             +QF TRL NVF IG+G K  +SLPKGKGIKL+I EE+  R
Sbjct: 214 LDNQFVTRLTNVFVIGEGNKSLISLPKGKGIKLSIAEERDAR 255

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>RS4_YEAST (P05753) 40S ribosomal protein S4 (S7) (YS6) (RP5)|
          Length = 260

 Score =  101 bits (252), Expect = 1e-21
 Identities = 48/102 (47%), Positives = 66/102 (64%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IK NDT+K+DL + KI DFIKFD                  I ++E+H G F+ +H++D+
Sbjct: 153 IKVNDTVKIDLASGKITDFIKFDAGKLVYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDS 212

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
             + F TRL NVF IG+  KP++SLPKGKGIKL+I EE+ +R
Sbjct: 213 LDNTFVTRLNNVFVIGEQGKPYISLPKGKGIKLSIAEERDRR 254

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>RS4_CANAL (P47837) 40S ribosomal protein S4 (S7)|
          Length = 262

 Score = 99.8 bits (247), Expect = 4e-21
 Identities = 53/103 (51%), Positives = 67/103 (65%), Gaps = 1/103 (0%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           I+ANDT+K+DL T KI  FIKFD                 VI +REK +G F+ +H++DA
Sbjct: 154 IRANDTVKIDLATGKIXSFIKFDTGRLVMVTGGRNLGRVGVIVHREKLEGGFDLVHIKDA 213

Query: 343 QGHQFATRLGNVFTIG-KGTKPWVSLPKGKGIKLTIIEEQRKR 218
             + F TRL NVF IG +  KPWVSLPKGKGIKL+I EE+ +R
Sbjct: 214 LENTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISEERDRR 256

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>RS4_DICDI (P51405) 40S ribosomal protein S4|
          Length = 266

 Score = 91.7 bits (226), Expect = 1e-18
 Identities = 43/99 (43%), Positives = 62/99 (62%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           I  +DTIK+D+E+ KI  FI F+                  + +REKH G+F+ +HV D 
Sbjct: 153 ISIHDTIKIDIESGKITAFIPFEVNNLCMIVGGHNLGRVGAVTHREKHPGSFDIVHVTDT 212

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQ 227
            GHQFATRL NVF IGK ++ +VSLP GKG++ + ++E+
Sbjct: 213 AGHQFATRLSNVFIIGKASQTFVSLPAGKGVRRSRVDER 251

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>RS4_CAEEL (Q9N3X2) 40S ribosomal protein S4|
          Length = 259

 Score = 90.1 bits (222), Expect = 3e-18
 Identities = 45/102 (44%), Positives = 61/102 (59%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           +K NDTI  ++ T KI D +KF+                 +I +RE+  G  + IH++D+
Sbjct: 153 VKVNDTIVFNISTQKITDSVKFEPGNLAYVTGGRNVGRVGIIGHRERLPGASDIIHIKDS 212

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 218
            GH FATR+ NVF IGKG K  VSLP G GI+L+I EE+ KR
Sbjct: 213 AGHSFATRISNVFVIGKGNKALVSLPTGAGIRLSIAEERDKR 254

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>RS4_HORSE (P55832) 40S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 30/60 (50%), Positives = 37/60 (61%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IK NDTI++DLET KI DFIKFD                 VI NRE+H G+F+ +HV+DA
Sbjct: 135 IKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDA 194

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>RS4_BOVIN (P79103) 40S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 30/60 (50%), Positives = 37/60 (61%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IK NDTI++DLET KI DFIKFD                 VI NRE+H G+F+ +HV+DA
Sbjct: 135 IKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDA 194

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>FOSB_BACLD (Q65KJ5) Metallothiol transferase fosB (EC 2.5.1.-) (Fosfomycin|
           resistance protein)
          Length = 154

 Score = 33.5 bits (75), Expect = 0.36
 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
 Frame = -2

Query: 400 IKNREKHKGTFETIHVEDAQGHQFATRLGNVF---TIGKGTKPWVSLPKG 260
           +K R++H+G  ++I+  D  GH+F    G+VF      +  KP +S  +G
Sbjct: 95  LKGRKRHEGDRDSIYFSDPDGHKFELHTGSVFDRLQYYQNEKPHLSFHEG 144

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>YDVG_SCHPO (O14232) Putative helicase C6F12.16c (EC 3.6.1.-)|
          Length = 1117

 Score = 33.1 bits (74), Expect = 0.47
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
 Frame = +2

Query: 356 VDGLKGSLMLLPVLD----HTNTPSVAPTSHHDDVADVKLDEVNNLVGLQVELDGV 511
           ++ LK +  L+P  D    H N  +VA T H   + D+  D+++N V ++ E D +
Sbjct: 72  IENLKDNQDLIPNNDVNGIHINNSAVADTKHKPKIGDIAADDISNEVSIKNEGDTI 127

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>Y977_HAEDU (Q7VMJ8) UPF0078 membrane protein HD_0977|
          Length = 199

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 6/36 (16%)
 Frame = +2

Query: 299 NGEH------VAQTGGKLVTLGILNVDGLKGSLMLL 388
           NG H      V + GGKL  +G+L  D LKGSL +L
Sbjct: 36  NGSHNPGATNVLRNGGKLAAIGVLLFDTLKGSLPVL 71

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>LEU1_SOYBN (Q39891) Probable 2-isopropylmalate synthase (EC 2.3.3.13)|
           (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase)
           (Late nodulin 56) (N-56)
          Length = 565

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 15/26 (57%), Positives = 19/26 (73%)
 Frame = -2

Query: 385 KHKGTFETIHVEDAQGHQFATRLGNV 308
           KHKGT+ETI  E+  GH+  TR+G V
Sbjct: 345 KHKGTYETISPEEI-GHKRTTRIGIV 369

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>YCGV_ECO57 (Q8X583) Hypothetical protein ycgV|
          Length = 547

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 376 GTFETIHVEDAQGHQFATRLGNVFTIGKGTKPW 278
           GTF T++VE+  G+       +V   G G KPW
Sbjct: 514 GTFTTLNVENLSGNSTFIMRADVVGEGNGVKPW 546

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>RS4_CHLS6 (Q40941) 40S ribosomal protein S4|
          Length = 242

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 20/85 (23%), Positives = 35/85 (41%)
 Frame = -2

Query: 523 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 344
           IK  D++ +    ++IV  +KF+                 VIK   K K   + IH+E  
Sbjct: 154 IKVEDSLLIKTINDEIVYALKFEVGSLCLITRGKHLGTIAVIKEIRKTKSLRKMIHLEKI 213

Query: 343 QGHQFATRLGNVFTIGKGTKPWVSL 269
            G +   +  ++  IG+     +SL
Sbjct: 214 DGKKLTKKCSDLLVIGESKTSILSL 238

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>MRAW_BACHK (Q6HEP6) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)|
          Length = 310

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +2

Query: 329 KLVTLGILNVDGLKGSL-MLLPVLDHTNTPSVAPTSHHDDVADVKLDEVNNLVGLQV 496
           KL  LGI  VDG+   L +  P LD   TP    + HHD   D+++D+  +L    V
Sbjct: 85  KLQELGITEVDGILFDLGVSSPQLD---TPERGFSYHHDAPLDMRMDQDASLTAYDV 138


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,820,448
Number of Sequences: 219361
Number of extensions: 1525031
Number of successful extensions: 4213
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 4032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4177
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 3970331829
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result