Clone Name | rbart56h01 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | RM32_DROME (Q9V9Z1) 39S ribosomal protein L32, mitochondrial pre... | 35 | 0.17 | 2 | ORA_PLAFN (P16405) Octapeptide-repeat antigen (ORA) (Fragment) | 33 | 0.37 | 3 | INAD_DROME (Q24008) Inactivation-no-after-potential D protein | 30 | 3.2 |
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>RM32_DROME (Q9V9Z1) 39S ribosomal protein L32, mitochondrial precursor| Length = 195 Score = 34.7 bits (78), Expect = 0.17 Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 7/83 (8%) Frame = -1 Query: 474 KRKIGAA--NPGPEDAAELLRMCLQCGIPKTYSHARGMVCPVCNDRPVQAKEPEKKK--- 310 KRK G N P LR CLQCG + H G++CP C + ++ E + K Sbjct: 73 KRKFGYPEYNWKPLREKRNLRSCLQCG----HDHEMGVLCPFCYQKVLKETELMQSKIQE 128 Query: 309 --GSAVKDKEKVKRMRGQSSHAS 247 G DKE + G+ + S Sbjct: 129 TLGLDPVDKEVIVLYEGEKAEQS 151
>ORA_PLAFN (P16405) Octapeptide-repeat antigen (ORA) (Fragment)| Length = 701 Score = 33.5 bits (75), Expect = 0.37 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = -2 Query: 263 NRHMHRGRARLRWLCGNSSTNWCQQDCWCTQSVTVH*VEYNLFA 132 N + G+ RL L GN+STNW DC C S V ++ F+ Sbjct: 24 NEEKNNGKFRLLGLYGNNSTNWLITDCACMISGVTTLVMHSKFS 67
>INAD_DROME (Q24008) Inactivation-no-after-potential D protein| Length = 674 Score = 30.4 bits (67), Expect = 3.2 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +2 Query: 11 DFAGNILTNTAYKTDPSTAGNCKYKEQ 91 D G I T Y+ D ++AGNCK +Q Sbjct: 192 DMTGRIRTEAGYEIDRASAGNCKLNKQ 218 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,472,423 Number of Sequences: 219361 Number of extensions: 1465648 Number of successful extensions: 5457 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 5335 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5455 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4085413911 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)