Clone Name | rbart56g09 |
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Clone Library Name | barley_pub |
>HBT1_YEAST (Q07653) Protein HBT1 (HUB1 target protein 1)| Length = 1046 Score = 30.4 bits (67), Expect = 1.1 Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 8/88 (9%) Frame = +1 Query: 64 TGTHTLSRGSASPDGTHTQHAHISIVWSYTKLAALKDRACQALPQYQRGTPLH*YTKPQS 243 T TH S+ + P T T H HI++ T + P+ H TK Sbjct: 220 TNTHEHSKANTGPSATATTHGHINV--KTTHPVSHGHSGSSTGPKSTAAAQDHSSTKTNP 277 Query: 244 TVL--------RSSYTRTYAHENANTDR 303 +V SS T+ Y++ ++N+DR Sbjct: 278 SVTHGHTSVKDNSSATKGYSNTDSNSDR 305
>DHGL_DROME (P18173) Glucose dehydrogenase [acceptor] precursor (EC 1.1.99.10)| [Contains: Glucose dehydrogenase [acceptor] short protein] Length = 625 Score = 29.6 bits (65), Expect = 1.9 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Frame = +3 Query: 12 KHNYHLTLDT*SIPIPEHGHTHTLSGKRISRRYTHTARTHLYRLVVHKASSSQGPR---L 182 ++N H+ L+T + I H HT + G +S ++ T + + + VV A + P L Sbjct: 272 RNNLHILLNTTATKILIHPHTKNVLGVEVSDQFGSTRKILVKKEVVLSAGAVNSPHILLL 331 Query: 183 SGI 191 SG+ Sbjct: 332 SGV 334
>NKTR_HUMAN (P30414) NK-tumor recognition protein (Natural-killer cells| cyclophilin-related protein) (NK-TR protein) Length = 1462 Score = 29.3 bits (64), Expect = 2.5 Identities = 23/96 (23%), Positives = 43/96 (44%) Frame = +1 Query: 46 PSRFPNTGTHTLSRGSASPDGTHTQHAHISIVWSYTKLAALKDRACQALPQYQRGTPLH* 225 PSR ++ + + SR S S T ++H S+ +S+++ + + Y R Sbjct: 1303 PSRDDDSQSRSPSR-SRSKSETKSRHRTRSVSYSHSRSRSRSSTSSYRSRSYSRSRSRGW 1361 Query: 226 YTKPQSTVLRSSYTRTYAHENANTDRHHSSYSVPPS 333 Y++ ++ SSY +H ++ R SS P S Sbjct: 1362 YSRGRTRSRSSSYRSYKSHRTSSRSRSRSSSYDPHS 1397
>LACI_KLEPN (P06220) Lactose operon repressor (Fragment)| Length = 354 Score = 29.3 bits (64), Expect = 2.5 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 8/44 (18%) Frame = -3 Query: 153 CVRPNDRDVCVLCVCTVWR--------CASPRECVCARVRESGW 46 CVR + RD C CV +W A P V AR+R + W Sbjct: 160 CVRFDHRDGCGACVRHLWEMGHREFGLLAGPESSVSARLRLASW 203
>RM02_CANGA (Q6FS31) 60S ribosomal protein L2, mitochondrial precursor| Length = 368 Score = 28.9 bits (63), Expect = 3.3 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Frame = +1 Query: 163 ALKDRACQAL-PQYQRGTPLH*YTKPQSTVLRSSYTRTYAHENANTDRHHSSYSVPP 330 ++KD A + L P+ G + KP ++R T+ Y EN R H+ Y+V P Sbjct: 31 SMKDSAGRRLGPKKYEGQDV----KPGEIIMRQRGTKFYPGENVKIGRDHTIYAVEP 83
>SP60_DICDI (P15270) Spore coat protein SP60 precursor| Length = 424 Score = 28.5 bits (62), Expect = 4.3 Identities = 11/28 (39%), Positives = 13/28 (46%) Frame = -3 Query: 153 CVRPNDRDVCVLCVCTVWRCASPRECVC 70 CV DR +CV C RC C+C Sbjct: 255 CVATKDRIICVKPTCDNTRCPPNYHCIC 282
>GP120_MOUSE (Q7TMA4) G-protein coupled receptor 120 (G-protein coupled receptor| GT01) Length = 361 Score = 28.5 bits (62), Expect = 4.3 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = +1 Query: 79 LSRGSASPDGTHTQHAHISIVWSYTKLAAL 168 L RG + P G TQ A ++ +W Y+ LAAL Sbjct: 143 LRRGLSGP-GRRTQAALLAFIWGYSALAAL 171
>LEU2_LACLA (Q02142) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 460 Score = 28.1 bits (61), Expect = 5.6 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = +3 Query: 54 IPEHGHTHTLSGKRISRRYTHTARTHLYRLVVHKASSSQG 173 IPE+ H + S + R H ARTHL + A++ G Sbjct: 410 IPEYVHCASTSNRNFEGRQGHNARTHLCSPAMAAAAAIAG 449
>CD2L7_CAEEL (P46551) Putative cell division cycle 2-related protein kinase 7| (EC 2.7.11.22) Length = 730 Score = 28.1 bits (61), Expect = 5.6 Identities = 12/37 (32%), Positives = 23/37 (62%) Frame = +1 Query: 229 TKPQSTVLRSSYTRTYAHENANTDRHHSSYSVPPSAG 339 T+P +T +S+ + + H + ++ HH + S+PPS G Sbjct: 662 TQPSTTTTKSNGSSNHHHHHHHS--HHHASSLPPSGG 696
>QUEF_AQUAE (O67073) 7-cyano-7-deazaguanine reductase (EC 1.7.1.-)| Length = 129 Score = 28.1 bits (61), Expect = 5.6 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -2 Query: 109 YRLEMRFPERVCVCPCSG 56 Y +E+ FPE C+CP SG Sbjct: 30 YMIEITFPEFTCLCPRSG 47
>NKTR_MOUSE (P30415) NK-tumor recognition protein (Natural-killer cells| cyclophilin-related protein) (NK-TR protein) Length = 1453 Score = 27.7 bits (60), Expect = 7.3 Identities = 20/90 (22%), Positives = 41/90 (45%) Frame = +1 Query: 46 PSRFPNTGTHTLSRGSASPDGTHTQHAHISIVWSYTKLAALKDRACQALPQYQRGTPLH* 225 PSR ++ + + R S S T ++H S+ +S+++ + + Y R Sbjct: 1294 PSRDGDSQSRSPHR-SRSKSETKSRHRTRSVSYSHSRSRSRSSTSSYRSRSYSRSRSRDW 1352 Query: 226 YTKPQSTVLRSSYTRTYAHENANTDRHHSS 315 Y++ ++ SSY ++H ++ R SS Sbjct: 1353 YSRGRTRSRSSSYGSFHSHRTSSRSRSRSS 1382
>SYQ_NEIMB (P56927) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA| ligase) (GlnRS) Length = 562 Score = 27.7 bits (60), Expect = 7.3 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = +3 Query: 21 YHLTLDT*SIPIPEHGHTHTLSGKRISRRYTHTARTHLYRLVVHK-ASSSQGPRLSGITT 197 Y LD +IP P R+ YT T++ L +LVV K S PR+ I+ Sbjct: 242 YDCVLD--NIPAPHATRPRQYEFSRLELLYTITSKRKLNQLVVEKHVSGWDDPRMPTISG 299 Query: 198 VPARYSTP 221 + R TP Sbjct: 300 MRRRGYTP 307
>RF3_PSEPK (Q88PH8) Peptide chain release factor 3 (RF-3)| Length = 527 Score = 27.3 bits (59), Expect = 9.5 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = +3 Query: 21 YHLTLDT*SIPIPEHGHTHTLSGKRISRRYTHTARTHL 134 YHLT D + P HGH T K I + + AR HL Sbjct: 181 YHLTGDYIVVYTPGHGHERT-EAKIIQKLDSDEARAHL 217
>LCR76_ARATH (P82785) Putative low-molecular-weight cysteine-rich protein LCR76| precursor Length = 86 Score = 27.3 bits (59), Expect = 9.5 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = -2 Query: 331 KAVHYMTSGVCQCWRSRARTCVCTSY-EGRCFG 236 K+++Y G+C WRS R C+ + +GRC G Sbjct: 37 KSLNYR--GLCLKWRSCKRVCISEGFPDGRCKG 67
>MDHP_PEA (P21528) Malate dehydrogenase [NADP], chloroplast precursor (EC| 1.1.1.82) (NADP-MDH) Length = 441 Score = 27.3 bits (59), Expect = 9.5 Identities = 15/23 (65%), Positives = 15/23 (65%), Gaps = 3/23 (13%) Frame = +2 Query: 164 LSRT---ALVRHYHSTSAVLHST 223 LSRT L RHYHST A LH T Sbjct: 24 LSRTRTRTLPRHYHSTFAPLHRT 46 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,266,344 Number of Sequences: 219361 Number of extensions: 1087695 Number of successful extensions: 2913 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 2800 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2913 length of database: 80,573,946 effective HSP length: 91 effective length of database: 60,612,095 effective search space used: 1454690280 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)