>IDH_AQUAE (O67480) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)|
           (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific
           ICDH) (IDP)
          Length = 426

 Score = 32.3 bits (72), Expect = 0.31
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -1

Query: 257 WQYPRARRPTFWHGEATPVPVPE 189
           + Y  A RP +W G+ATP+P PE
Sbjct: 132 FDYYSAVRPVYWMGQATPIPNPE 154

>TMPSD_HUMAN (Q9BYE2) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic|
           serine protease) (Membrane-type mosaic serine protease)
          Length = 581

 Score = 31.2 bits (69), Expect = 0.70
 Identities = 18/43 (41%), Positives = 23/43 (53%)
 Frame = +1

Query: 97  SAWAADARGPPAGYIPGL*SPSSS*QRTGKGSGTGTGVASPCQ 225
           SA A+ A+  PAG  PG  SP+ +       +GT  G ASP Q
Sbjct: 16  SAGASPAQASPAGTPPGRASPAQASPAQASPAGTPPGRASPAQ 58

>IR04_HCMVA (P09694) Hypothetical protein IRL4 (TRL4)|
          Length = 170

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -2

Query: 298 PSDAPPLPPGVRRSGSTPALVGQPFGTGRQP 206
           P   PP PP +      P LVG  +GTGR+P
Sbjct: 22  PLPPPPAPPPLPSPPRYPFLVGWSWGTGRRP 52

>CUC2C_HAECO (P16252) Cuticle collagen 2C (Fragment)|
          Length = 210

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = -2

Query: 295 SDAPPLPPGVRRSGSTPALVGQPFGTGRQPRCRCPSPSL 179
           +DAPP PPG +     P   G P G   QP    PS  L
Sbjct: 87  NDAPPGPPGPKGPPGPPGKAGAP-GAAGQPGANAPSEPL 124

>NEUR4_HUMAN (Q8WWR8) Sialidase-4 (EC 3.2.1.18) (N-acetyl-alpha-neuraminidase 4)|
          Length = 484

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = +3

Query: 141 PRPLVTFILLTKDREGLGHRHRGCLPVPKGWPTSAGVLPLRLTPGGS 281
           PR     +L  ++R GL +R    LPVP G PT    +  RL+P  S
Sbjct: 4   PRTPSRTVLFERERTGLTYRVPSLLPVPPG-PTLLAFVEQRLSPDDS 49

>LARP1_HUMAN (Q6PKG0) La-related protein 1 (La ribonucleoprotein domain family|
           member 1)
          Length = 1096

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -2

Query: 286 PPLPPGVRRSGSTPALVGQPFGTGRQPRCRCPSP 185
           PP P G    G      G+P G+ R+PR  C  P
Sbjct: 30  PPAPEGKGEPGPNDVRGGEPDGSARRPRPPCAKP 63

>HEM2_SPIOL (P24493) Delta-aminolevulinic acid dehydratase, chloroplast|
           precursor (EC 4.2.1.24) (Porphobilinogen synthase)
           (ALADH) (ALAD)
          Length = 433

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -2

Query: 289 APPLPPGVRRSGSTPALVGQPFGTGRQPRCRCPSP 185
           APP+PP  +    TP++   P   GR+PR    SP
Sbjct: 87  APPVPPTPKAPSGTPSV--SPLSLGRRPRRNRTSP 119

>NPW_PIG (Q8MI35) Neuropeptide W precursor (Preproprotein L8) (PPL8)|
           [Contains: Neuropeptide W-23 (NPW23) (L8); Neuropeptide
           W-30 (NPW30) (L8C)]
          Length = 152

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
 Frame = -2

Query: 298 PSDAPPLPPGVR-----RSGSTPALVGQPFGTGRQPRCRCPSP 185
           P DAP LPPGV+     R GS  +  G P    R PR R   P
Sbjct: 99  PRDAPLLPPGVQTLWQVRRGSFRS--GIPVSAPRSPRARGSEP 139

>AB1IP_MOUSE (Q8R5A3) Amyloid beta A4 precursor protein-binding family B member|
           1-interacting protein (APBB1-interacting protein 1)
           (Proline-rich EVH1 ligand 1) (PREL-1) (Proline-rich
           protein 48)
          Length = 670

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = -2

Query: 295 SDAPPLPPGVRRSGST---PALVGQPFGTGRQPRCRCPSPSLSFV 170
           S  PP PP VRRS  T   PAL  +  G G    C  P P  +F+
Sbjct: 519 SSLPPPPPPVRRSSDTCGSPALPSKVKGPG---TCTFPHPPENFL 560

>FOG1_HUMAN (Q8IX07) Zinc finger protein ZFPM1 (Zinc finger protein multitype|
           1) (Friend of GATA protein 1) (Friend of GATA-1) (FOG-1)
          Length = 1004

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +1

Query: 124 PPAGYIPGL*SPSSS*QRTGKGSGTGTGVASPCQKVGRRARG 249
           PP G+ P   SP     R G GSG+G G+A P +  G  A G
Sbjct: 756 PPPGHAPAPESP-----RPGSGSGSGPGLA-PARSPGPAADG 791

>COATA_BPIKE (P03663) Coat protein A precursor|
          Length = 434

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 17/41 (41%), Positives = 19/41 (46%)
 Frame = +1

Query: 85  VSQVSAWAADARGPPAGYIPGL*SPSSS*QRTGKGSGTGTG 207
           V   SAW       P GY+P    PSSS  + G   GTG G
Sbjct: 183 VCSSSAWK------PTGYVPESGEPSSSPLKDGDTGGTGEG 217

>PGL1_CAEEL (Q9TZQ3) P granule abnormality protein 1|
          Length = 730

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
 Frame = -1

Query: 248 PRARRPTFW-HGEATPVPVPEP 186
           P+AR  T W  G+ATP+P+P P
Sbjct: 622 PQARAETAWGSGDATPMPLPAP 643

>COAA1_BOVIN (P23206) Collagen alpha-1(X) chain precursor|
          Length = 674

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 6/92 (6%)
 Frame = -2

Query: 286 PPLPPGVRRSGSTPALVGQPFGTGRQPRCRCPSPSLSFVRRMKVTRGRGYN------LQV 125
           PP PPG R +   P L G P   G   +   P   +   +R  V+  +G          V
Sbjct: 491 PPGPPGPRGNAGEPGLPGPPGPPGPPGQVALPEDFVKAGQRPFVSANQGVTGMPVSAFTV 550

Query: 124 GPARQRPRR*LG*PVDWH**KRILYNTFPHYE 29
             ++  P   +G P+ +    +ILYN   HY+
Sbjct: 551 ILSKAYPA--IGTPIPF---DKILYNKQQHYD 577

>GUN4_TRIRE (O14405) Endoglucanase-4 precursor (EC 3.2.1.4) (Endoglucanase IV)|
           (Endo-1,4-beta-glucanase IV) (Cellulase IV) (EGIV)
          Length = 344

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = -2

Query: 298 PSDAPPLPPGVRRSGSTPALVGQPFGTGRQPRCRCPSPS 182
           PS  PP        G T  L GQ  G+G     RC  P+
Sbjct: 292 PSSTPPATTSAPAGGPTQTLYGQCGGSGYSGPTRCAPPA 330

>CYSP4_DICDI (P54639) Cysteine proteinase 4 precursor (EC 3.4.22.-)|
          Length = 442

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +1

Query: 67  TNASQRVSQVSAWAADARGPPAGYIPGL*SPSSS*QRTGKGSGTGTGVAS 216
           T+ SQ  SQ  + +  + G  +G        S+S   +G GSG+G+G  S
Sbjct: 342 TSGSQSGSQSGSQSGQSTGSQSGQTSASGQASASGSGSGSGSGSGSGSGS 391

>SYQ_CAEEL (O62431) Probable glutaminyl-tRNA synthetase (EC 6.1.1.18)|
           (Glutamine--tRNA ligase) (GlnRS)
          Length = 786

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -2

Query: 181 LSFVRRMKVTRGRGYNLQVGPARQRP 104
           L+FV   KV   RG+ +Q+ P R+RP
Sbjct: 360 LAFVCHQKVEEMRGFEVQLSPWRERP 385

>PER1_HUMAN (O15534) Period circadian protein 1 (Circadian pacemaker protein|
            Rigui) (hPER)
          Length = 1290

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
 Frame = -2

Query: 298  PSDAPPLPPGVRRSGSTPALVGQPFGTGRQP--RCRCPSP-SLSFVRRMKVTRGRGYNLQ 128
            P++ PP P     S S PAL   P      P    RC SP  L+ ++  ++ R  G  + 
Sbjct: 942  PAEGPPTPASHSPSPSLPALPPSPPHRPDSPLFNSRCSSPLQLNLLQLEELPRAEGAAVA 1001

Query: 127  VGP 119
             GP
Sbjct: 1002 GGP 1004

>SYN_DROME (Q24546) Synapsin [Contains: Synapsin-1 (Syn1) (Syn1-S); Synapsin-2|
           (Syn2)]
          Length = 1025

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 18/64 (28%), Positives = 26/64 (40%)
 Frame = -2

Query: 298 PSDAPPLPPGVRRSGSTPALVGQPFGTGRQPRCRCPSPSLSFVRRMKVTRGRGYNLQVGP 119
           P + PP P   + +G+ P L    FG G+ P    P+P             RG +    P
Sbjct: 42  PPNMPPPPAPGQPAGAAPEL-SLSFGAGKTPATAAPAPP------------RGVSAPTSP 88

Query: 118 ARQR 107
           A+ R
Sbjct: 89  AKSR 92

>K1043_HUMAN (Q96AY4) TPR repeat-containing protein KIAA1043|
          Length = 1716

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +3

Query: 207  GCLPVPKGWPTSAGVLPLRLTPGGSG 284
            G LP+P G P +A   PLRL P G+G
Sbjct: 1677 GSLPLPAGPPATAPARPLRL-PSGNG 1701

>IF2_SYNY3 (P72689) Translation initiation factor IF-2|
          Length = 1001

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -2

Query: 289 APPLPPGVRRSGSTPALVGQPFGTGRQPRCRCPSPSLSFVRRMKV 155
           APP PP  +++   P L G P  T    +   P+P+   V R ++
Sbjct: 167 APPTPPA-KKAAPAPRLAGPPGRTASPNKTAVPAPAKPKVNRPEI 210

>MKRN3_MOUSE (Q60764) Makorin-3 (Zinc finger protein 127)|
          Length = 544

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 15/39 (38%), Positives = 16/39 (41%)
 Frame = -1

Query: 293 GRPAASPGRETEWQYPRARRPTFWHGEATPVPVPEPFPV 177
           GR     G E   Q P   R     G   P+PVP P PV
Sbjct: 231 GRVVPPHGPEAPLQSPAIEREHMAMGMGMPMPVPMPMPV 269

>BCD_DROME (P09081) Homeotic protein bicoid (PRD-4)|
          Length = 494

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -2

Query: 283 PLPPGVRRS-GSTPALVGQPFGTGRQPRCRCPSPSLS 176
           PL PG+++S G  P+L     G G  P    PSP+ S
Sbjct: 168 PLSPGMKQSDGDPPSLQTLSLGGGATPNALTPSPTPS 204

>CCDC9_HUMAN (Q9Y3X0) Coiled-coil domain-containing protein 9|
          Length = 531

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 15/37 (40%), Positives = 16/37 (43%)
 Frame = -2

Query: 295 SDAPPLPPGVRRSGSTPALVGQPFGTGRQPRCRCPSP 185
           S   P PPG  + G TP   G   G GR  R    SP
Sbjct: 80  SPGTPRPPGASKGGRTPPQQGGRAGMGRASRSWEGSP 116

>IDD_MOUSE (P98154) Integral membrane protein DGCR2/IDD precursor|
           (Seizure-related membrane-bound adhesion protein)
          Length = 548

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 16/31 (51%), Positives = 18/31 (58%)
 Frame = -2

Query: 295 SDAPPLPPGVRRSGSTPALVGQPFGTGRQPR 203
           S A  +PP   +SGSTPA    P G GR PR
Sbjct: 512 SSALLVPPDPAQSGSTPATEAPP-GGGRLPR 541

>FLGH_BURMA (Q62ES7) Flagellar L-ring protein precursor (Basal body L-ring|
           protein)
          Length = 222

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = -2

Query: 295 SDAPPLPPGVRRSGS--TPALVGQPFGTGRQPRCRCPSPSLSFVRRMKVTRGRGYN 134
           S  PP+PP ++  GS   P   G+P    ++PR      ++     +  T+  G N
Sbjct: 33  SAMPPMPPAMQAPGSIYNPGYAGRPLFEDQRPRNVGDILTIVIAENINATKSSGAN 88

>CITE2_MOUSE (O35740) Cbp/p300-interacting transactivator 2 (MSG-related protein|
           1) (MRG-1)
          Length = 269

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = +3

Query: 186 GLGHRHRGCLPVPKGWPTSAGVLPLRLTPGGSGGASEG 299
           G     R C P   G  ++ G      TPGGSGG S G
Sbjct: 148 GTNQHFRDCNPKHSGGSSTPGGAGGSGTPGGSGGTSGG 185

>SSGP_VOLCA (P21997) Sulfated surface glycoprotein 185 precursor (SSG 185)|
          Length = 485

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = -2

Query: 298 PSDAPPLPPGVRRSGSTPALVGQPFGTGRQPRCRCPSPSLS 176
           PS +PP+PP        PA  G PF       C C S S S
Sbjct: 304 PSPSPPVPPPPSPPSVLPAATGFPF-------CECVSRSPS 337

>ERIC1_HUMAN (Q86X53) Glutamate-rich protein 1|
          Length = 443

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 16/42 (38%), Positives = 18/42 (42%)
 Frame = +1

Query: 115 ARGPPAGYIPGL*SPSSS*QRTGKGSGTGTGVASPCQKVGRR 240
           A GPP GY+P    PSS        SG  T    P  +  RR
Sbjct: 71  ASGPPEGYVPCWPEPSSCGSPENASSGDDTEDQDPHDQPKRR 112

>FLGH_BURPS (Q63YB2) Flagellar L-ring protein precursor (Basal body L-ring|
           protein)
          Length = 240

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = -2

Query: 295 SDAPPLPPGVRRSGS--TPALVGQPFGTGRQPRCRCPSPSLSFVRRMKVTRGRGYN 134
           S  PP+PP ++  GS   P   G+P    ++PR      ++     +  T+  G N
Sbjct: 51  SAMPPMPPAMQAPGSIYNPGYAGRPLFEDQRPRNVGDILTIVIAENINATKSSGAN 106


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,771,547
Number of Sequences: 219361
Number of extensions: 1123656
Number of successful extensions: 4973
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 3841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4738
length of database: 80,573,946
effective HSP length: 75
effective length of database: 64,121,871
effective search space used: 1538924904
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)