>gb|AC104675.3| Sus scrofa clone RP44-122H18, complete sequence
          Length = 176345

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 129   tgcaggttatatccccggcctc 150
             ||||||||||||||||||||||
Sbjct: 47557 tgcaggttatatccccggcctc 47578

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 101      cctgggccgctgacgcgcggggcccacctg 130
                |||| |||||||||| ||||||||||||||
Sbjct: 27179783 cctgtgccgctgacgtgcggggcccacctg 27179754

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 101      cctgggccgctgacgcgcggggcccacctg 130
                |||| |||||||||| ||||||||||||||
Sbjct: 27105383 cctgtgccgctgacgtgcggggcccacctg 27105354

>emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559_C07 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 145816

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 101    cctgggccgctgacgcgcggggcccacctg 130
              |||| |||||||||| ||||||||||||||
Sbjct: 118682 cctgtgccgctgacgtgcggggcccacctg 118653

>gb|AC146913.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0013C12 map near S6115, complete sequence
          Length = 123718

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 106   gccgctgacgcgcggggcccacctg 130
             |||||||||| ||||||||||||||
Sbjct: 61552 gccgctgacgtgcggggcccacctg 61528

>gb|AY271660.1| Actinomadura madurae maduropeptin biosynthesis gene cluster, partial
            sequence
          Length = 11426

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 185  agggctcgggcaccggcaccg 205
            |||||||||||||||||||||
Sbjct: 5341 agggctcgggcaccggcaccg 5361

>gb|AC116603.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBb0015J03, complete sequence
          Length = 135940

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 106   gccgctgacgcgcggggcccacctg 130
             |||||||||| ||||||||||||||
Sbjct: 90773 gccgctgacgtgcggggcccacctg 90749

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 106      gccgctgacgcgcggggcccacctg 130
                |||||||||| ||||||||||||||
Sbjct: 12894216 gccgctgacgtgcggggcccacctg 12894192

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 106     gccgctgacgcgcggggcccacctg 130
               |||||||||| ||||||||||||||
Sbjct: 4201687 gccgctgacgtgcggggcccacctg 4201711



 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 108      cgctgacgcgcggggcccac 127
                ||||||||||||||||||||
Sbjct: 19249001 cgctgacgcgcggggcccac 19249020

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 106     gccgctgacgcgcggggcccacctg 130
               |||||||||| ||||||||||||||
Sbjct: 4202508 gccgctgacgtgcggggcccacctg 4202532



 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 108      cgctgacgcgcggggcccac 127
                ||||||||||||||||||||
Sbjct: 19260277 cgctgacgcgcggggcccac 19260296

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 106      gccgctgacgcgcggggcccacctg 130
                |||||||||| ||||||||||||||
Sbjct: 12974423 gccgctgacgtgcggggcccacctg 12974399

>gb|AC167466.6| Mus musculus chromosome 7, clone RP24-220N8, complete sequence
          Length = 163721

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   tctagtcaccttcatcctcc 168
             ||||||||||||||||||||
Sbjct: 87410 tctagtcaccttcatcctcc 87429

>gb|AY360388.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0038J12,
             complete sequence
          Length = 131944

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 106   gccgctgacgcgcggggcccacct 129
             |||||||||| |||||||||||||
Sbjct: 15701 gccgctgacgtgcggggcccacct 15678

>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     atgccagtcaacgggttagc 90
              ||||||||||||||||||||
Sbjct: 646423 atgccagtcaacgggttagc 646442

>gb|AC130540.4| Mus musculus BAC clone RP23-474I3 from chromosome 14, complete sequence
          Length = 201412

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 168    ctgacaaaggacagggaagg 187
              ||||||||||||||||||||
Sbjct: 132646 ctgacaaaggacagggaagg 132627

>gb|AC102432.9| Mus musculus chromosome 19, clone RP24-114A21, complete sequence
          Length = 199240

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   tctagtcaccttcatcctcc 168
             ||||||||||||||||||||
Sbjct: 26221 tctagtcaccttcatcctcc 26202

>gb|AC161413.5| Mus musculus chromosome 19, clone RP23-106D17, complete sequence
          Length = 215356

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 149    tctagtcaccttcatcctcc 168
              ||||||||||||||||||||
Sbjct: 104846 tctagtcaccttcatcctcc 104865

>gb|AC087891.12| Mus musculus Strain C57BL6/J Chromosome 10 RP23-440N1, complete
             sequence
          Length = 195052

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   tcaccttcatcctcctgaca 173
             ||||||||||||||||||||
Sbjct: 94105 tcaccttcatcctcctgaca 94086

>gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 genomic sequence, complete
              sequence
          Length = 152172

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 108    cgctgacgcgcggggcccac 127
              ||||||||||||||||||||
Sbjct: 127380 cgctgacgcgcggggcccac 127361

>gb|AC011071.12|AC011071 Drosophila melanogaster, chromosome X, region 18C-18D, BAC clone
              BACR27L16, complete sequence
          Length = 182623

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 228    ggttggccgacgagcgcgggggta 251
              |||||||||||||||| |||||||
Sbjct: 177310 ggttggccgacgagcgggggggta 177333

>tpg|BK005741.1| TPA: TPA_exp: Drosophila melanogaster dosage compensation complex
            binding fragment 9, complete sequence
          Length = 7646

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 228  ggttggccgacgagcgcgggggta 251
            |||||||||||||||| |||||||
Sbjct: 2636 ggttggccgacgagcgggggggta 2659

>gb|AE006470.1| Chlorobium tepidum TLS, complete genome
          Length = 2154946

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 115     gcgcggggcccacctgcagg 134
               ||||||||||||||||||||
Sbjct: 1651353 gcgcggggcccacctgcagg 1651372

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 106      gccgctgacgcgcggggcccacct 129
                |||||||||| |||||||||||||
Sbjct: 13032579 gccgctgacgtgcggggcccacct 13032602

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 108      cgctgacgcgcggggcccac 127
                ||||||||||||||||||||
Sbjct: 19228064 cgctgacgcgcggggcccac 19228045

>gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, region 18D-18D, BAC clone
              BACR10M08, complete sequence
          Length = 180213

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 228    ggttggccgacgagcgcgggggta 251
              |||||||||||||||| |||||||
Sbjct: 115790 ggttggccgacgagcgggggggta 115813

>gb|AC093377.4| Homo sapiens BAC clone RP11-224E23 from 2, complete sequence
          Length = 61056

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    gccaagtcagcgcctgggcc 108
             ||||||||||||||||||||
Sbjct: 41061 gccaagtcagcgcctgggcc 41080

>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBb0062D12
          Length = 155408

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 108    cgctgacgcgcggggcccac 127
              ||||||||||||||||||||
Sbjct: 151459 cgctgacgcgcggggcccac 151440

>dbj|AP006480.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone: B1052H09
          Length = 190806

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 106    gccgctgacgcgcggggcccacct 129
              |||||||||| |||||||||||||
Sbjct: 169559 gccgctgacgtgcggggcccacct 169582

>dbj|AP006481.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone: B1100F03
          Length = 139217

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 106   gccgctgacgcgcggggcccacct 129
             |||||||||| |||||||||||||
Sbjct: 13099 gccgctgacgtgcggggcccacct 13122

>dbj|AP003815.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1163_G04
          Length = 106253

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 108  cgctgacgcgcggggcccac 127
            ||||||||||||||||||||
Sbjct: 4290 cgctgacgcgcggggcccac 4271

>gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 of 74 of the complete
              sequence
          Length = 346474

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 228    ggttggccgacgagcgcgggggta 251
              |||||||||||||||| |||||||
Sbjct: 221556 ggttggccgacgagcgggggggta 221579


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,924,973
Number of Sequences: 3902068
Number of extensions: 1924973
Number of successful extensions: 38444
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38132
Number of HSP's gapped (non-prelim): 312
length of query: 299
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 277
effective length of database: 17,147,199,772
effective search space: 4749774336844
effective search space used: 4749774336844
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)