ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart56e12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X62388.1|HV1433PH H.vulgare mRNA for 14-3-3 protein homolog... 581 e-163
2ref|XM_469508.1| Oryza sativa (japonica cultivar-group), mRNA 58 2e-05
3gb|AC087181.9| Oryza sativa (japonica cultivar-group) chromosome... 58 2e-05
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 58 2e-05
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
6dbj|D16140.1|RICS94A Oryza sativa S94 mRNA for brain specific pr... 58 2e-05
7dbj|AK103065.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 2e-05
8gb|AC135956.6| Oryza sativa (japonica cultivar-group) chromosome... 48 0.019
9gb|AC115871.8| Mus musculus chromosome 5, clone RP24-343A12, com... 44 0.29
10gb|AC101748.7| Mus musculus chromosome 5, clone RP24-133H21, com... 44 0.29
11gb|AC093533.2| Homo sapiens chromosome 5 clone RP11-46C20, compl... 44 0.29
12gb|AC114661.13| Mus musculus chromosome 5, clone RP24-166I7, com... 44 0.29
13gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome 44 0.29
14emb|AL603786.3| Zebrafish DNA sequence from clone BUSM1-57F23, c... 44 0.29
15emb|CR759894.19| Zebrafish DNA sequence from clone DKEYP-84G6 in... 44 0.29
16emb|AL671733.6| Mouse DNA sequence from clone RP23-83I22 on chro... 44 0.29
17emb|AL670446.8| Mouse DNA sequence from clone RP23-291H3 on chro... 44 0.29
18gb|AC092224.2| Drosophila melanogaster clone BACR17M04, complete... 42 1.2
19gb|BT013570.1| Lycopersicon esculentum clone 132308R, mRNA sequence 42 1.2
20emb|Z97056.1|HS434P1 Human DNA sequence from clone RP3-434P1 on ... 42 1.2
21emb|AL109942.13|HSJ473J16 Human DNA sequence from clone RP3-473J... 42 1.2
22emb|AL670472.7| Mouse DNA sequence from clone RP23-26M1 on chrom... 42 1.2
23gb|AC099538.2| Homo sapiens chromosome 3 clone RP11-90I9, comple... 42 1.2
24dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
25gb|AC154574.2| Mus musculus BAC clone RP23-399K3 from chromosome... 42 1.2
26dbj|AP005479.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
27gb|AE003644.4| Drosophila melanogaster chromosome 2L, section 53... 42 1.2
28emb|AL607041.18| Mouse DNA sequence from clone RP23-434K11 on ch... 42 1.2
29emb|AL772394.7| Mouse DNA sequence from clone RP23-67C1 on chrom... 42 1.2
30emb|AL163195.5|CNS01RIH Human chromosome 14 DNA sequence BAC R-1... 42 1.2
31gb|AC133461.12| Mus musculus chromosome 15, clone RP23-52B2, com... 40 4.6
32gb|AC150421.2| Branchiostoma floridae clone CH302-78B15, complet... 40 4.6
33ref|XM_471692.1| Oryza sativa (japonica cultivar-group), predic... 40 4.6
34gb|AC154882.11| Mus musculus chromosome 3, clone RP24-187P10, co... 40 4.6
35gb|AY220479.1| Nicotiana tabacum Avr9/Cf-9 rapidly elicited prot... 40 4.6
36emb|BX537295.7| Zebrafish DNA sequence from clone DKEY-21O10 in ... 40 4.6
37gb|AC126439.3| Mus musculus BAC clone RP24-290I17 from chromosom... 40 4.6
38gb|AC126611.3| Mus musculus BAC clone RP23-316N22 from chromosom... 40 4.6
39gb|AC117199.3| Mus musculus BAC clone RP23-134L22 from 10, compl... 40 4.6
40emb|Z84481.1|HS440O21 Human DNA sequence from clone RP3-440O21 o... 40 4.6
41emb|AL392083.17| Human DNA sequence from clone RP11-29A19 on chr... 40 4.6
42emb|AL136382.6| Human DNA sequence from clone RP5-977L11 on chro... 40 4.6
43emb|AL731621.3|OSJN00268 Oryza sativa genomic DNA, chromosome 4,... 40 4.6
44gb|AC162908.4| Mus musculus BAC clone RP24-296A15 from chromosom... 40 4.6
45gb|AC107025.3| Homo sapiens 3 BAC RP11-474M18 (Roswell Park Canc... 40 4.6
46gb|BC042487.1| Homo sapiens cDNA clone IMAGE:4821609 40 4.6
47gb|AC119428.2| Homo sapiens chromosome 1 clone RP11-117D22, comp... 40 4.6
48gb|AC004561.3| Arabidopsis thaliana chromosome 2 clone F16P2 map... 40 4.6
49gb|AC093503.2| Homo sapiens chromosome 19 clone CTB-12A17, compl... 40 4.6
50gb|AC024569.5| Homo sapiens chromosome 5 clone CTD-2188H20, comp... 40 4.6
51dbj|AK154390.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 4.6
52gb|AC020977.6| Homo sapiens chromosome 5 clone RP11-92M7, comple... 40 4.6
53dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
54dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
55gb|AC105443.3| Homo sapiens chromosome 7 clone RP11-533N5, compl... 40 4.6
56gb|AC147103.3| Pan troglodytes BAC clone RP43-31L11 from chromos... 40 4.6
57gb|AC092620.2| Homo sapiens BAC clone RP11-231E19 from 2, comple... 40 4.6
58gb|AC124905.3| Equus caballus clone CH241-184O19, complete sequence 40 4.6
59dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
60dbj|AB126005.1| Orthetrum triangulare melania mitochondrial DNA,... 40 4.6
61emb|BX323798.6| Zebrafish DNA sequence from clone CH211-225G5, c... 40 4.6
62emb|AL772311.19| Mouse DNA sequence from clone RP23-87P16 on chr... 40 4.6
63dbj|AK120531.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.6
64emb|AL954149.19| Zebrafish DNA sequence from clone CH211-146G19 ... 40 4.6
65emb|BX470246.11| Zebrafish DNA sequence from clone DKEYP-8F4 in ... 40 4.6
66gb|AC102405.8| Mus musculus chromosome 3, clone RP24-318I21, com... 40 4.6
67emb|AL662999.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 4.6
68gb|CP000218.1| Drosophila melanogaster genomic scaffold 21100002... 40 4.6
69gb|DP000020.1| Equus caballus target 1 genomic scaffold 40 4.6
70emb|AL611924.14| Mouse DNA sequence from clone RP23-106K5 on chr... 40 4.6
71dbj|AP000079.1| Homo sapiens genomic DNA, chromosome 8p11.2, sen... 40 4.6 
>emb|X62388.1|HV1433PH H.vulgare  mRNA for 14-3-3 protein homologue (14-3-3a)
          Length = 1361

 Score =  581 bits (293), Expect = e-163
 Identities = 306/309 (99%), Gaps = 1/309 (0%)
 Strand = Plus / Minus

                                                                        
Query: 40   tgatgttgaacctgtggatcgatataataataagaaaatacatttcataattaagctaag 99
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1361 tgatgttgaacatgtggatcgatataataataagaaaatacatttcataattaagctaag 1302

                                                                        
Query: 100  ggaagaatcctacaacttcaat-attttgagagggaaagtagacaagaaaatctcagttg 158
            |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1301 ggaagaatcctagaacttcaattattttgagagggaaagtagacaagaaaatctcagttg 1242

                                                                        
Query: 159  ttgcctcataagaaaggcacaagctttgggggcgccttacgcgaagtatgatcaatcatc 218
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1241 ttgcctcataagaaaggcacaagctttgggggcgccttacgcgaagtatgatcaatcatc 1182

                                                                        
Query: 219  aacaagccatgaaaattgctaatacagcaatactaataatgtgctgcaatacaggaaata 278
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1181 aacaagccatgaaaattgctaatacagcaatactaataatgtgctgcaatacaggaaata 1122

                                                                        
Query: 279  gtttgaaatctgctaatgaactaagaagcgacgatgtccacatgaccgtcctcatgactg 338
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1121 gtttgaaatctgctaatgaactaagaagcgacgatgtccacatgaccgtcctcatgactg 1062

                     
Query: 339  tagtccact 347
            |||||||||
Sbjct: 1061 tagtccact 1053
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>ref|XM_469508.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1362

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 39/41 (95%), Gaps = 1/41 (2%)
 Strand = Plus / Minus

                                                     
Query: 236  gctaatacagcaatactaataatgtgctgc-aatacaggaa 275
            ||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 1242 gctaatacagcgatactaataatgtgctgcaaatacaggaa 1202
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>gb|AC087181.9| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0018H01
             map R1538, complete sequence
          Length = 142712

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 39/41 (95%), Gaps = 1/41 (2%)
 Strand = Plus / Plus

                                                      
Query: 236   gctaatacagcaatactaataatgtgctgc-aatacaggaa 275
             ||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 40195 gctaatacagcgatactaataatgtgctgcaaatacaggaa 40235
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 39/41 (95%), Gaps = 1/41 (2%)
 Strand = Plus / Minus

                                                         
Query: 236      gctaatacagcaatactaataatgtgctgc-aatacaggaa 275
                ||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 28372847 gctaatacagcgatactaataatgtgctgcaaatacaggaa 28372807



 Score = 48.1 bits (24), Expect = 0.019
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 163      ctcataagaaaggcacaagctttg 186
                ||||||||||||||||||||||||
Sbjct: 29468758 ctcataagaaaggcacaagctttg 29468735
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 39/41 (95%), Gaps = 1/41 (2%)
 Strand = Plus / Minus

                                                         
Query: 236      gctaatacagcaatactaataatgtgctgc-aatacaggaa 275
                ||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 28464171 gctaatacagcgatactaataatgtgctgcaaatacaggaa 28464131



 Score = 48.1 bits (24), Expect = 0.019
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 163      ctcataagaaaggcacaagctttg 186
                ||||||||||||||||||||||||
Sbjct: 29560180 ctcataagaaaggcacaagctttg 29560157
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>dbj|D16140.1|RICS94A Oryza sativa S94 mRNA for brain specific protein, complete cds
          Length = 1455

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 39/41 (95%), Gaps = 1/41 (2%)
 Strand = Plus / Minus

                                                     
Query: 236  gctaatacagcaatactaataatgtgctgc-aatacaggaa 275
            ||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 1279 gctaatacagcgatactaataatgtgctgcaaatacaggaa 1239
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>dbj|AK103065.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117N24, full
            insert sequence
          Length = 1382

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 39/41 (95%), Gaps = 1/41 (2%)
 Strand = Plus / Minus

                                                     
Query: 236  gctaatacagcaatactaataatgtgctgc-aatacaggaa 275
            ||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 1244 gctaatacagcgatactaataatgtgctgcaaatacaggaa 1204
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>gb|AC135956.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0005H20, complete sequence
          Length = 135560

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 163   ctcataagaaaggcacaagctttg 186
             ||||||||||||||||||||||||
Sbjct: 18543 ctcataagaaaggcacaagctttg 18566
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>gb|AC115871.8| Mus musculus chromosome 5, clone RP24-343A12, complete sequence
          Length = 175928

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 5      aaatacatttcaaaattagaat 26
              ||||||||||||||||||||||
Sbjct: 129591 aaatacatttcaaaattagaat 129612
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>gb|AC101748.7| Mus musculus chromosome 5, clone RP24-133H21, complete sequence
          Length = 168366

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 63     ataataataagaaaatacattt 84
              ||||||||||||||||||||||
Sbjct: 109048 ataataataagaaaatacattt 109069
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>gb|AC093533.2| Homo sapiens chromosome 5 clone RP11-46C20, complete sequence
          Length = 154814

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 7     atacatttcaaaattagaatag 28
             ||||||||||||||||||||||
Sbjct: 42721 atacatttcaaaattagaatag 42700
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>gb|AC114661.13| Mus musculus chromosome 5, clone RP24-166I7, complete sequence
          Length = 153768

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 5      aaatacatttcaaaattagaat 26
              ||||||||||||||||||||||
Sbjct: 143815 aaatacatttcaaaattagaat 143794
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>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome
          Length = 3179300

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 309     acgatgtccacatgaccgtcct 330
               ||||||||||||||||||||||
Sbjct: 2576609 acgatgtccacatgaccgtcct 2576630
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>emb|AL603786.3| Zebrafish DNA sequence from clone BUSM1-57F23, complete sequence
          Length = 94712

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 61    atataataataagaaaatacatttca 86
             |||||||||||||| |||||||||||
Sbjct: 30727 atataataataagataatacatttca 30752
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>emb|CR759894.19| Zebrafish DNA sequence from clone DKEYP-84G6 in linkage group 10,
             complete sequence
          Length = 188280

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 61    atataataataagaaaatacatttca 86
             |||||||||||||| |||||||||||
Sbjct: 75018 atataataataagataatacatttca 74993
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>emb|AL671733.6| Mouse DNA sequence from clone RP23-83I22 on chromosome 4, complete
             sequence
          Length = 186686

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 17    aaattagaataggggaataaaa 38
             ||||||||||||||||||||||
Sbjct: 39083 aaattagaataggggaataaaa 39104
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>emb|AL670446.8| Mouse DNA sequence from clone RP23-291H3 on chromosome 4, complete
             sequence
          Length = 171444

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 17    aaattagaataggggaataaaa 38
             ||||||||||||||||||||||
Sbjct: 95861 aaattagaataggggaataaaa 95882
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>gb|AC092224.2| Drosophila melanogaster clone BACR17M04, complete sequence
          Length = 145213

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 63    ataataataagaaaatacatt 83
             |||||||||||||||||||||
Sbjct: 84665 ataataataagaaaatacatt 84645
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>gb|BT013570.1| Lycopersicon esculentum clone 132308R, mRNA sequence
          Length = 5039

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 131  gggaaagtagacaagaaaatc 151
            |||||||||||||||||||||
Sbjct: 4482 gggaaagtagacaagaaaatc 4502



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 131  gggaaagtagacaagaaaat 150
            ||||||||||||||||||||
Sbjct: 4401 gggaaagtagacaagaaaat 4420
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>emb|Z97056.1|HS434P1 Human DNA sequence from clone RP3-434P1 on chromosome 22, complete
              sequence
          Length = 124990

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 115    cttcaatattttgagagggaa 135
              |||||||||||||||||||||
Sbjct: 123773 cttcaatattttgagagggaa 123753
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>emb|AL109942.13|HSJ473J16 Human DNA sequence from clone RP3-473J16 on chromosome 6q25.3-26 Contains
              3' end of the MAP3K4 gene for mitogen-activated protein
              kinase kinase kinase 4 (MTK1, MEKK4, MAPKKK4, KIAA0213,
              homolog of yeast SSK2/SSK22 MAP kinase kinase kinase), the
              gene for lysophosphatidic acid acyltransferase-delta
              (LPAAT-delta) (FLJ23628, contains mRNA DKFZp434M038) and
              the gene for hypothetical protein FLJ23112 (DKFZP566E2324),
              complete sequence
          Length = 176217

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 3      agaaatacatttcaaaattag 23
              |||||||||||||||||||||
Sbjct: 174796 agaaatacatttcaaaattag 174776
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>emb|AL670472.7| Mouse DNA sequence from clone RP23-26M1 on chromosome 11 Contains a
              ribosomal protein S6 (Rps6) pseudogene, the gene for ileal
              fatty acid binding protein 6 (gastrotropin) (Fabp6), two
              novel genes, the gene for a novel protein (1810033K05Rik),
              a mitochondrial ribosomal protein 63 (Mrp63) pseudogene,
              the gene for step II splicing factor SLU7 (Slu7-pending),
              the Pttg1 gene for pituitary tumor-transforming 1 and a CpG
              island, complete sequence
          Length = 232609

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 130    agggaaagtagacaagaaaat 150
              |||||||||||||||||||||
Sbjct: 220815 agggaaagtagacaagaaaat 220835
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>gb|AC099538.2| Homo sapiens chromosome 3 clone RP11-90I9, complete sequence
          Length = 170033

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 121    tattttgagagggaaagtaga 141
              |||||||||||||||||||||
Sbjct: 150525 tattttgagagggaaagtaga 150505
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 5        aaatacatttcaaaattagaa 25
                |||||||||||||||||||||
Sbjct: 17517008 aaatacatttcaaaattagaa 17517028
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>gb|AC154574.2| Mus musculus BAC clone RP23-399K3 from chromosome 14, complete sequence
          Length = 180263

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 282    tgaaatctgctaatgaactaa 302
              |||||||||||||||||||||
Sbjct: 113661 tgaaatctgctaatgaactaa 113641
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>dbj|AP005479.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0045A07
          Length = 174165

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 5     aaatacatttcaaaattagaa 25
             |||||||||||||||||||||
Sbjct: 44957 aaatacatttcaaaattagaa 44977
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>gb|AE003644.4| Drosophila melanogaster chromosome 2L, section 53 of 83 of the complete
              sequence
          Length = 263306

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 63     ataataataagaaaatacatt 83
              |||||||||||||||||||||
Sbjct: 197979 ataataataagaaaatacatt 197999
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>emb|AL607041.18| Mouse DNA sequence from clone RP23-434K11 on chromosome 11, complete
             sequence
          Length = 198761

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 5     aaatacatttcaaaattagaataggggaa 33
             |||||||||| ||||||||||| ||||||
Sbjct: 48936 aaatacatttaaaaattagaattggggaa 48964
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>emb|AL772394.7| Mouse DNA sequence from clone RP23-67C1 on chromosome 4, complete
             sequence
          Length = 89437

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 62    tataataataagaaaatacat 82
             |||||||||||||||||||||
Sbjct: 45354 tataataataagaaaatacat 45374
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>emb|AL163195.5|CNS01RIH Human chromosome 14 DNA sequence BAC R-14J7 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 162209

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 69     ataagaaaatacatttcataa 89
              |||||||||||||||||||||
Sbjct: 114266 ataagaaaatacatttcataa 114286
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>gb|AC133461.12| Mus musculus chromosome 15, clone RP23-52B2, complete sequence
          Length = 176450

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   tgagagggaaagtagacaag 145
             ||||||||||||||||||||
Sbjct: 55775 tgagagggaaagtagacaag 55756
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>gb|AC150421.2| Branchiostoma floridae clone CH302-78B15, complete sequence
          Length = 159541

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 272 ggaaatagtttgaaatctgc 291
           ||||||||||||||||||||
Sbjct: 362 ggaaatagtttgaaatctgc 381
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>ref|XM_471692.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1650

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 167 taagaaaggcacaagctttggggg 190
           ||||||||||| ||||||||||||
Sbjct: 374 taagaaaggcaaaagctttggggg 397
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>gb|AC154882.11| Mus musculus chromosome 3, clone RP24-187P10, complete sequence
          Length = 175586

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 8      tacatttcaaaattagaata 27
              ||||||||||||||||||||
Sbjct: 167391 tacatttcaaaattagaata 167410
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>gb|AY220479.1| Nicotiana tabacum Avr9/Cf-9 rapidly elicited protein 189 (ACRE189)
            mRNA, complete cds
          Length = 1879

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 39   ttgatgttgaacctgtggat 58
            ||||||||||||||||||||
Sbjct: 1472 ttgatgttgaacctgtggat 1491
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>emb|BX537295.7| Zebrafish DNA sequence from clone DKEY-21O10 in linkage group 1,
             complete sequence
          Length = 165366

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    ataataataagaaaatacat 82
             ||||||||||||||||||||
Sbjct: 35826 ataataataagaaaatacat 35845
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>gb|AC126439.3| Mus musculus BAC clone RP24-290I17 from chromosome 14, complete sequence
          Length = 163978

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 65     aataataagaaaatacattt 84
              ||||||||||||||||||||
Sbjct: 160367 aataataagaaaatacattt 160386
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>gb|AC126611.3| Mus musculus BAC clone RP23-316N22 from chromosome 14, complete sequence
          Length = 177469

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 65     aataataagaaaatacattt 84
              ||||||||||||||||||||
Sbjct: 165101 aataataagaaaatacattt 165082
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>gb|AC117199.3| Mus musculus BAC clone RP23-134L22 from 10, complete sequence
          Length = 210514

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 71    aagaaaatacatttcataattaag 94
             |||||||||||||||||| |||||
Sbjct: 60980 aagaaaatacatttcatagttaag 61003
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>emb|Z84481.1|HS440O21 Human DNA sequence from clone RP3-440O21 on chromosome X, complete
            sequence
          Length = 107677

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 3    agaaatacatttcaaaatta 22
            ||||||||||||||||||||
Sbjct: 3588 agaaatacatttcaaaatta 3569
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>emb|AL392083.17| Human DNA sequence from clone RP11-29A19 on chromosome 10 Contains the
             3' end of the gene for double-stranded RNA specific
             adenosine deaminase (ADAR3) (FLJ30545 FLJ25034 FLJ36975)
             and three CpG islands, complete sequence
          Length = 164741

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     agaaatacatttcaaaatta 22
             ||||||||||||||||||||
Sbjct: 78276 agaaatacatttcaaaatta 78295
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>emb|AL136382.6| Human DNA sequence from clone RP5-977L11 on chromosome 1p22.3-31.2
             Contains the 3' end of a novel gene (KIAA1229), complete
             sequence
          Length = 136387

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     cagaaatacatttcaaaatt 21
             ||||||||||||||||||||
Sbjct: 14253 cagaaatacatttcaaaatt 14272
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>emb|AL731621.3|OSJN00268 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0013O03,
              complete sequence
          Length = 118791

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 167    taagaaaggcacaagctttggggg 190
              ||||||||||| ||||||||||||
Sbjct: 110115 taagaaaggcaaaagctttggggg 110138
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>gb|AC162908.4| Mus musculus BAC clone RP24-296A15 from chromosome 10, complete sequence
          Length = 170988

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 71     aagaaaatacatttcataattaag 94
              |||||||||||||||||| |||||
Sbjct: 115424 aagaaaatacatttcatagttaag 115447
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>gb|AC107025.3| Homo sapiens 3 BAC RP11-474M18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 178033

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    aaaatacatttcataattaa 93
             ||||||||||||||||||||
Sbjct: 32986 aaaatacatttcataattaa 33005
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>gb|BC042487.1| Homo sapiens cDNA clone IMAGE:4821609
          Length = 2772

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 74   aaaatacatttcataattaa 93
            ||||||||||||||||||||
Sbjct: 1905 aaaatacatttcataattaa 1924
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>gb|AC119428.2| Homo sapiens chromosome 1 clone RP11-117D22, complete sequence
          Length = 67437

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   aaaatctcagttgttgcctc 165
             ||||||||||||||||||||
Sbjct: 41730 aaaatctcagttgttgcctc 41749
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>gb|AC004561.3| Arabidopsis thaliana chromosome 2 clone F16P2 map ve014, complete
             sequence
          Length = 131743

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    aataagaaaatacatttcat 87
             ||||||||||||||||||||
Sbjct: 52636 aataagaaaatacatttcat 52617
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>gb|AC093503.2| Homo sapiens chromosome 19 clone CTB-12A17, complete sequence
          Length = 147598

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     tacatttcaaaattagaata 27
             ||||||||||||||||||||
Sbjct: 32329 tacatttcaaaattagaata 32310
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>gb|AC024569.5| Homo sapiens chromosome 5 clone CTD-2188H20, complete sequence
          Length = 193547

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 63    ataataataagaaaatacatttca 86
             |||||||||| |||||||||||||
Sbjct: 70429 ataataataaaaaaatacatttca 70406
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>dbj|AK154390.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630026G22
           product:Warning: possibly chimeric clone, full insert
           sequence
          Length = 5435

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  aagctaagggaagaatccta 111
           ||||||||||||||||||||
Sbjct: 972 aagctaagggaagaatccta 991
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>gb|AC020977.6| Homo sapiens chromosome 5 clone RP11-92M7, complete sequence
          Length = 156105

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 63    ataataataagaaaatacatttca 86
             |||||||||| |||||||||||||
Sbjct: 52925 ataataataaaaaaatacatttca 52902
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 167      taagaaaggcacaagctttggggg 190
                ||||||||||| ||||||||||||
Sbjct: 13473344 taagaaaggcaaaagctttggggg 13473367
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 163     ctcataagaaaggcacaagctttg 186
               |||||||||||||||||| |||||
Sbjct: 9050154 ctcataagaaaggcacaaactttg 9050131
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>gb|AC105443.3| Homo sapiens chromosome 7 clone RP11-533N5, complete sequence
          Length = 185272

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   ggaaagtagacaagaaaatc 151
             ||||||||||||||||||||
Sbjct: 88564 ggaaagtagacaagaaaatc 88583
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>gb|AC147103.3| Pan troglodytes BAC clone RP43-31L11 from chromosome 7, complete sequence
          Length = 222089

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    ggaaagtagacaagaaaatc 151
              ||||||||||||||||||||
Sbjct: 169815 ggaaagtagacaagaaaatc 169834
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>gb|AC092620.2| Homo sapiens BAC clone RP11-231E19 from 2, complete sequence
          Length = 151037

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    aaaatacatttcataattaa 93
             ||||||||||||||||||||
Sbjct: 92004 aaaatacatttcataattaa 92023
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>gb|AC124905.3| Equus caballus clone CH241-184O19, complete sequence
          Length = 171209

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   aaaattgctaatacagcaat 249
             ||||||||||||||||||||
Sbjct: 28793 aaaattgctaatacagcaat 28812
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>dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0499C11
          Length = 151369

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 163   ctcataagaaaggcacaagctttg 186
             |||||||||||||||||| |||||
Sbjct: 79161 ctcataagaaaggcacaaactttg 79138
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>dbj|AB126005.1| Orthetrum triangulare melania mitochondrial DNA, nearly complete
            genome except some genes
          Length = 14033

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 106  atcctacaacttcaatattt 125
            ||||||||||||||||||||
Sbjct: 3528 atcctacaacttcaatattt 3547
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>emb|BX323798.6| Zebrafish DNA sequence from clone CH211-225G5, complete sequence
          Length = 81343

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    aaaatacatttcataattaa 93
             ||||||||||||||||||||
Sbjct: 27631 aaaatacatttcataattaa 27612
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>emb|AL772311.19| Mouse DNA sequence from clone RP23-87P16 on chromosome 4, complete
             sequence
          Length = 234393

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   tgagagggaaagtagacaag 145
             ||||||||||||||||||||
Sbjct: 79099 tgagagggaaagtagacaag 79080
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>dbj|AK120531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127H23, full
            insert sequence
          Length = 6225

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 163  ctcataagaaaggcacaagctttg 186
            |||||||||||||||||| |||||
Sbjct: 1229 ctcataagaaaggcacaaactttg 1252
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>emb|AL954149.19| Zebrafish DNA sequence from clone CH211-146G19 in linkage group 2,
              complete sequence
          Length = 163971

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 62     tataataataagaaaatacatttcataa 89
              |||||||| |||||||||||||| ||||
Sbjct: 103594 tataataaaaagaaaatacatttaataa 103621
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>emb|BX470246.11| Zebrafish DNA sequence from clone DKEYP-8F4 in linkage group 20,
             complete sequence
          Length = 148286

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     agaaatacatttcaaaatta 22
             ||||||||||||||||||||
Sbjct: 49083 agaaatacatttcaaaatta 49064
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>gb|AC102405.8| Mus musculus chromosome 3, clone RP24-318I21, complete sequence
          Length = 181425

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 8    tacatttcaaaattagaata 27
            ||||||||||||||||||||
Sbjct: 3198 tacatttcaaaattagaata 3217
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>emb|AL662999.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0018A10,
            complete sequence
          Length = 133238

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 167  taagaaaggcacaagctttggggg 190
            ||||||||||| ||||||||||||
Sbjct: 1138 taagaaaggcaaaagctttggggg 1161
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>gb|CP000218.1| Drosophila melanogaster genomic scaffold 211000022280780
          Length = 166742

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     gatataataataagaaaata 79
              ||||||||||||||||||||
Sbjct: 130817 gatataataataagaaaata 130798
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>gb|DP000020.1| Equus caballus target 1 genomic scaffold
          Length = 1907055

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 230     aaaattgctaatacagcaat 249
               ||||||||||||||||||||
Sbjct: 1661437 aaaattgctaatacagcaat 1661456
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>emb|AL611924.14| Mouse DNA sequence from clone RP23-106K5 on chromosome 4, complete
             sequence
          Length = 164958

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 92    aagctaagggaagaatccta 111
             ||||||||||||||||||||
Sbjct: 18090 aagctaagggaagaatccta 18109
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>dbj|AP000079.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region,
             section 15/19, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    tataataataagaaaataca 81
             ||||||||||||||||||||
Sbjct: 39808 tataataataagaaaataca 39827


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,586,644
Number of Sequences: 3902068
Number of extensions: 4586644
Number of successful extensions: 106831
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106496
Number of HSP's gapped (non-prelim): 334
length of query: 347
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 325
effective length of database: 17,147,199,772
effective search space: 5572839925900
effective search space used: 5572839925900
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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