Clone Name | rbart56e06 |
---|---|
Clone Library Name | barley_pub |
>emb|BX677665.17| Zebrafish DNA sequence from clone DKEY-25M3 in linkage group 12, complete sequence Length = 136144 Score = 42.1 bits (21), Expect = 0.59 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 gctgaatcatacaaattgctggttt 36 ||||||||||||| ||||||||||| Sbjct: 133793 gctgaatcatacacattgctggttt 133817
>gb|AC093871.3| Homo sapiens BAC clone RP11-608B3 from 4, complete sequence Length = 167818 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 gaaccaagctgaatcatacaaatt 28 |||||||||||||||| ||||||| Sbjct: 24827 gaaccaagctgaatcaaacaaatt 24804
>gb|AC098849.9| Mus musculus chromosome 3, clone RP23-12L23, complete sequence Length = 210441 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 152 atgcattatgatgctataacaag 174 ||||||||||||||| ||||||| Sbjct: 32694 atgcattatgatgctgtaacaag 32716
>gb|AC116728.12| Mus musculus chromosome 3, clone RP23-345H12, complete sequence Length = 192916 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 152 atgcattatgatgctataacaag 174 ||||||||||||||| ||||||| Sbjct: 52851 atgcattatgatgctgtaacaag 52829
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 24 aaattgctggtttagtacc 42 ||||||||||||||||||| Sbjct: 1862748 aaattgctggtttagtacc 1862730
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 51 ctacctacctagatagcttagct 73 |||||||||||| |||||||||| Sbjct: 3166734 ctacctacctagctagcttagct 3166756
>gb|AC099401.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1134F05, complete sequence Length = 101799 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 51 ctacctacctagatagcttagct 73 |||||||||||| |||||||||| Sbjct: 89747 ctacctacctagctagcttagct 89769
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 51 ctacctacctagatagcttagct 73 |||||||||||| |||||||||| Sbjct: 3166845 ctacctacctagctagcttagct 3166867
>gb|AC155311.2| Mus musculus BAC clone RP23-407F7 from chromosome 12, complete sequence Length = 166104 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 155 cattatgatgctataacaa 173 ||||||||||||||||||| Sbjct: 63181 cattatgatgctataacaa 63199 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,512,602 Number of Sequences: 3902068 Number of extensions: 1512602 Number of successful extensions: 95792 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 95682 Number of HSP's gapped (non-prelim): 110 length of query: 186 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 164 effective length of database: 17,147,199,772 effective search space: 2812140762608 effective search space used: 2812140762608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)