ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart56e03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_196494.1| Oryza sativa (japonica cultivar-group) putative... 161 2e-36
2gb|AF350426.1| Oryza sativa (japonica cultivar-group) class III ... 161 2e-36
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 161 2e-36
4gb|AF330230.1| Oryza sativa chitinase mRNA, partial cds 161 2e-36
5gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nb... 161 2e-36
6dbj|AK071453.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 2e-36
7gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 161 2e-36
8dbj|AK061215.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 5e-34
9gb|AC090889.3| Canis familiaris clone RP81-156O18, complete sequ... 44 0.33
10gb|AY308825.1| Sus scrofa isolate LR2 prolactin receptor (PRLR) ... 42 1.3
11gb|AY308824.1| Sus scrofa isolate Minipig prolactin receptor (PR... 42 1.3
12gb|AC131269.3| Homo sapiens chromosome 8, clone RP11-416I21, com... 42 1.3
13gb|AC130360.4| Homo sapiens chromosome 8, clone RP11-287P18, com... 42 1.3
14gb|AF252831.2| Homo sapiens chromosome 8 clone SCb-177k12 map 8p... 42 1.3
15gb|AC105214.6| Homo sapiens chromosome 8, clone RP11-354G4, comp... 42 1.3
16gb|AC026698.6| Homo sapiens chromosome 5 clone CTC-457H17, compl... 42 1.3
17gb|AC005406.2| Homo sapiens clone b128f11, complete sequence 42 1.3
18gb|AC130366.5| Homo sapiens chromosome 8, clone RP11-1236K1, com... 42 1.3
19gb|AC010598.6| Homo sapiens chromosome 5 clone CTC-560O9, comple... 42 1.3
20gb|AC130339.12| Homo sapiens chromosome 8, clone RP13-941O14, co... 42 1.3
21gb|AC134683.9| Homo sapiens chromosome 8, clone RP11-1175L4, com... 42 1.3
22gb|AC134395.7| Homo sapiens chromosome 8, clone RP11-739E3, comp... 42 1.3
23gb|AC130379.8| Homo sapiens chromosome 17, clone RP13-383M5, com... 42 1.3
24gb|U96306.1|SSU96306 Sus scrofa prolactin receptor (PRLR) gene, ... 42 1.3
25gb|AC130365.5| Homo sapiens chromosome 8, clone RP11-1195F20, co... 42 1.3
26gb|AC117621.7| Mus musculus chromosome 8, clone RP23-114B10, com... 40 5.1
27gb|AC007035.3| Homo sapiens BAC clone RP11-104I19 from 7, comple... 40 5.1
28gb|AC146161.2| Pan troglodytes BAC clone RP43-1G6 from 7, comple... 40 5.1
29emb|AL139818.15| Human DNA sequence from clone RP11-311B18 on ch... 40 5.1
30emb|AL138772.8| Human DNA sequence from clone RP4-576A20 on chro... 40 5.1
31emb|AL031054.1|HS48G12 Human DNA sequence from clone RP1-48G12 o... 40 5.1
32gb|AC162797.6| Mus musculus chromosome 8, clone RP23-293E17, com... 40 5.1
33gb|AC131956.1| Homo sapiens BAC clone RP11-793B23 from 4, comple... 40 5.1
34emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.1
35emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.1
36emb|BX640421.1| Bordetella pertussis strain Tohama I, complete g... 40 5.1
37emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segmen... 40 5.1
38gb|AC011466.6| Homo sapiens chromosome 19 clone CTC-453G23, comp... 40 5.1
39gb|AC092291.3| Homo sapiens chromosome 16 clone CTD-2502C11, com... 40 5.1
40gb|AC009167.9| Homo sapiens chromosome 16 clone RP11-82O18, comp... 40 5.1
41gb|AC069019.8|AC069019 Mus musculus BAC RP23-455N13 (Roswell Pa... 40 5.1
42gb|AF279874.3| Homo sapiens chromosome 8 clone CTD-2351C9 map q2... 40 5.1
43gb|AC008392.6|AC008392 Homo sapiens chromosome 19 clone CTC-241F... 40 5.1
44gb|AY920365.1| HIV-1 isolate Dj410 from Djibouti nonfunctional p... 40 5.1
45gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 5.1
46emb|CR394550.5| Zebrafish DNA sequence from clone CH211-231O11 i... 40 5.1
47emb|BX284626.3| Mouse DNA sequence from clone RP23-76P19 on chro... 40 5.1
48gb|AC167663.3| Culex pipiens quinquefasciatus, clone Culex pipie... 40 5.1
49gb|AC167560.3| Culex pipiens quinquefasciatus, clone Culex pipie... 40 5.1
50gb|AC103359.6| Mus musculus chromosome 8, clone RP24-365B9, comp... 40 5.1
51emb|AL592224.17| Mouse DNA sequence from clone RP23-174G1 on chr... 40 5.1
52gb|AC167664.4| Culex pipiens quinquefasciatus, clone Culex pipie... 40 5.1 
>ref|NM_196494.1| Oryza sativa (japonica cultivar-group) putative class III chitinase
           RCB4 (OSJNBa0032I20.7), mRNA
          Length = 924

 Score =  161 bits (81), Expect = 2e-36
 Identities = 159/185 (85%)
 Strand = Plus / Minus

                                                                       
Query: 191 tgtctcgtacttgaatccttggttcctggaatggtctgcagcccagacaaagatgccgta 250
           |||||| |||||||| |||||| |||||||||| || ||||||||||  |||||||||||
Sbjct: 882 tgtctcatacttgaacccttggctcctggaatgatcagcagcccagatgaagatgccgta 823

                                                                       
Query: 251 gagcttgccctgctcctgcagagtccggcaagcactaagcgcggtgtcgaccggcaccga 310
            ||||| |||| || |||||||||||||||||| || ||||| || ||||| ||||||||
Sbjct: 822 cagcttcccctccttctgcagagtccggcaagcgctcagcgccgtctcgacgggcaccga 763

                                                                       
Query: 311 ggtattggtcgccgccgtggtgaagctggccaggatgttggctccagggtagttggcgat 370
           |||  | ||||||||||| |||||||| || ||||||||  |||| ||||||||| ||||
Sbjct: 762 ggtcgtcgtcgccgccgtcgtgaagctcgcaaggatgttccctccggggtagttgacgat 703

                
Query: 371 ctgct 375
           |||||
Sbjct: 702 ctgct 698
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>gb|AF350426.1| Oryza sativa (japonica cultivar-group) class III chitinase RCB4
           (Rcb4) mRNA, complete cds
          Length = 1158

 Score =  161 bits (81), Expect = 2e-36
 Identities = 159/185 (85%)
 Strand = Plus / Minus

                                                                       
Query: 191 tgtctcgtacttgaatccttggttcctggaatggtctgcagcccagacaaagatgccgta 250
           |||||| |||||||| |||||| |||||||||| || ||||||||||  |||||||||||
Sbjct: 934 tgtctcatacttgaacccttggctcctggaatgatcagcagcccagatgaagatgccgta 875

                                                                       
Query: 251 gagcttgccctgctcctgcagagtccggcaagcactaagcgcggtgtcgaccggcaccga 310
            ||||| |||| || |||||||||||||||||| || ||||| || ||||| ||||||||
Sbjct: 874 cagcttcccctccttctgcagagtccggcaagcgctcagcgccgtctcgacgggcaccga 815

                                                                       
Query: 311 ggtattggtcgccgccgtggtgaagctggccaggatgttggctccagggtagttggcgat 370
           |||  | ||||||||||| |||||||| || ||||||||  |||| ||||||||| ||||
Sbjct: 814 ggtcgtcgtcgccgccgtcgtgaagctcgcaaggatgttccctccggggtagttgacgat 755

                
Query: 371 ctgct 375
           |||||
Sbjct: 754 ctgct 750
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  161 bits (81), Expect = 2e-36
 Identities = 159/185 (85%)
 Strand = Plus / Minus

                                                                            
Query: 191      tgtctcgtacttgaatccttggttcctggaatggtctgcagcccagacaaagatgccgta 250
                |||||| |||||||| |||||| |||||||||| || ||||||||||  |||||||||||
Sbjct: 14045725 tgtctcatacttgaacccttggctcctggaatgatcagcagcccagatgaagatgccgta 14045666

                                                                            
Query: 251      gagcttgccctgctcctgcagagtccggcaagcactaagcgcggtgtcgaccggcaccga 310
                 ||||| |||| || |||||||||||||||||| || ||||| || ||||| ||||||||
Sbjct: 14045665 cagcttcccctccttctgcagagtccggcaagcgctcagcgccgtctcgacgggcaccga 14045606

                                                                            
Query: 311      ggtattggtcgccgccgtggtgaagctggccaggatgttggctccagggtagttggcgat 370
                |||  | ||||||||||| |||||||| || ||||||||  |||| ||||||||| ||||
Sbjct: 14045605 ggtcgtcgtcgccgccgtcgtgaagctcgcaaggatgttccctccggggtagttgacgat 14045546

                     
Query: 371      ctgct 375
                |||||
Sbjct: 14045545 ctgct 14045541
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>gb|AF330230.1| Oryza sativa chitinase mRNA, partial cds
          Length = 941

 Score =  161 bits (81), Expect = 2e-36
 Identities = 159/185 (85%)
 Strand = Plus / Minus

                                                                       
Query: 191 tgtctcgtacttgaatccttggttcctggaatggtctgcagcccagacaaagatgccgta 250
           |||||| |||||||| |||||| |||||||||| || ||||||||||  |||||||||||
Sbjct: 807 tgtctcatacttgaacccttggctcctggaatgatcagcagcccagatgaagatgccgta 748

                                                                       
Query: 251 gagcttgccctgctcctgcagagtccggcaagcactaagcgcggtgtcgaccggcaccga 310
            ||||| |||| || |||||||||||||||||| || ||||| || ||||| ||||||||
Sbjct: 747 cagcttcccctccttctgcagagtccggcaagcgctcagcgccgtctcgacgggcaccga 688

                                                                       
Query: 311 ggtattggtcgccgccgtggtgaagctggccaggatgttggctccagggtagttggcgat 370
           |||  | ||||||||||| |||||||| || ||||||||  |||| ||||||||| ||||
Sbjct: 687 ggtcgtcgtcgccgccgtcgtgaagctcgcaaggatgttccctccggggtagttgacgat 628

                
Query: 371 ctgct 375
           |||||
Sbjct: 627 ctgct 623
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>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence
          Length = 144651

 Score =  161 bits (81), Expect = 2e-36
 Identities = 159/185 (85%)
 Strand = Plus / Minus

                                                                         
Query: 191   tgtctcgtacttgaatccttggttcctggaatggtctgcagcccagacaaagatgccgta 250
             |||||| |||||||| |||||| |||||||||| || ||||||||||  |||||||||||
Sbjct: 61854 tgtctcatacttgaacccttggctcctggaatgatcagcagcccagatgaagatgccgta 61795

                                                                         
Query: 251   gagcttgccctgctcctgcagagtccggcaagcactaagcgcggtgtcgaccggcaccga 310
              ||||| |||| || |||||||||||||||||| || ||||| || ||||| ||||||||
Sbjct: 61794 cagcttcccctccttctgcagagtccggcaagcgctcagcgccgtctcgacgggcaccga 61735

                                                                         
Query: 311   ggtattggtcgccgccgtggtgaagctggccaggatgttggctccagggtagttggcgat 370
             |||  | ||||||||||| |||||||| || ||||||||  |||| ||||||||| ||||
Sbjct: 61734 ggtcgtcgtcgccgccgtcgtgaagctcgcaaggatgttccctccggggtagttgacgat 61675

                  
Query: 371   ctgct 375
             |||||
Sbjct: 61674 ctgct 61670
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>dbj|AK071453.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093F02, full
           insert sequence
          Length = 1211

 Score =  161 bits (81), Expect = 2e-36
 Identities = 159/185 (85%)
 Strand = Plus / Minus

                                                                       
Query: 191 tgtctcgtacttgaatccttggttcctggaatggtctgcagcccagacaaagatgccgta 250
           |||||| |||||||| |||||| |||||||||| || ||||||||||  |||||||||||
Sbjct: 935 tgtctcatacttgaacccttggctcctggaatgatcagcagcccagatgaagatgccgta 876

                                                                       
Query: 251 gagcttgccctgctcctgcagagtccggcaagcactaagcgcggtgtcgaccggcaccga 310
            ||||| |||| || |||||||||||||||||| || ||||| || ||||| ||||||||
Sbjct: 875 cagcttcccctccttctgcagagtccggcaagcgctcagcgccgtctcgacgggcaccga 816

                                                                       
Query: 311 ggtattggtcgccgccgtggtgaagctggccaggatgttggctccagggtagttggcgat 370
           |||  | ||||||||||| |||||||| || ||||||||  |||| ||||||||| ||||
Sbjct: 815 ggtcgtcgtcgccgccgtcgtgaagctcgcaaggatgttccctccggggtagttgacgat 756

                
Query: 371 ctgct 375
           |||||
Sbjct: 755 ctgct 751
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  161 bits (81), Expect = 2e-36
 Identities = 159/185 (85%)
 Strand = Plus / Minus

                                                                            
Query: 191      tgtctcgtacttgaatccttggttcctggaatggtctgcagcccagacaaagatgccgta 250
                |||||| |||||||| |||||| |||||||||| || ||||||||||  |||||||||||
Sbjct: 14053967 tgtctcatacttgaacccttggctcctggaatgatcagcagcccagatgaagatgccgta 14053908

                                                                            
Query: 251      gagcttgccctgctcctgcagagtccggcaagcactaagcgcggtgtcgaccggcaccga 310
                 ||||| |||| || |||||||||||||||||| || ||||| || ||||| ||||||||
Sbjct: 14053907 cagcttcccctccttctgcagagtccggcaagcgctcagcgccgtctcgacgggcaccga 14053848

                                                                            
Query: 311      ggtattggtcgccgccgtggtgaagctggccaggatgttggctccagggtagttggcgat 370
                |||  | ||||||||||| |||||||| || ||||||||  |||| ||||||||| ||||
Sbjct: 14053847 ggtcgtcgtcgccgccgtcgtgaagctcgcaaggatgttccctccggggtagttgacgat 14053788

                     
Query: 371      ctgct 375
                |||||
Sbjct: 14053787 ctgct 14053783
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>dbj|AK061215.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-E04, full
           insert sequence
          Length = 1096

 Score =  153 bits (77), Expect = 5e-34
 Identities = 158/185 (85%)
 Strand = Plus / Minus

                                                                       
Query: 191 tgtctcgtacttgaatccttggttcctggaatggtctgcagcccagacaaagatgccgta 250
           |||||| |||||||| |||||| |||||||||| || ||||||||||  |||||||||||
Sbjct: 820 tgtctcatacttgaacccttggctcctggaatgatcagcagcccagatgaagatgccgta 761

                                                                       
Query: 251 gagcttgccctgctcctgcagagtccggcaagcactaagcgcggtgtcgaccggcaccga 310
            ||||| |||| || |||||||||||||||||| || ||||| || ||||| ||||||||
Sbjct: 760 cagcttcccctccttctgcagagtccggcaagcgctcagcgccgtctcgacgggcaccga 701

                                                                       
Query: 311 ggtattggtcgccgccgtggtgaagctggccaggatgttggctccagggtagttggcgat 370
           | |  | ||||||||||| |||||||| || ||||||||  |||| ||||||||| ||||
Sbjct: 700 gatcgtcgtcgccgccgtcgtgaagctcgcaaggatgttccctccggggtagttgacgat 641

                
Query: 371 ctgct 375
           |||||
Sbjct: 640 ctgct 636
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>gb|AC090889.3| Canis familiaris clone RP81-156O18, complete sequence
          Length = 146276

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 96     attccatatgatttcactcata 117
              ||||||||||||||||||||||
Sbjct: 122897 attccatatgatttcactcata 122918
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>gb|AY308825.1| Sus scrofa isolate LR2 prolactin receptor (PRLR) mRNA, complete cds
          Length = 1878

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 324  gccgtggtgaagctggccagg 344
            |||||||||||||||||||||
Sbjct: 1802 gccgtggtgaagctggccagg 1782
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>gb|AY308824.1| Sus scrofa isolate Minipig prolactin receptor (PRLR) mRNA, complete
            cds
          Length = 1878

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 324  gccgtggtgaagctggccagg 344
            |||||||||||||||||||||
Sbjct: 1802 gccgtggtgaagctggccagg 1782
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>gb|AC131269.3| Homo sapiens chromosome 8, clone RP11-416I21, complete sequence
          Length = 190031

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 28    ctttattattaaggaaaaata 48
             |||||||||||||||||||||
Sbjct: 98519 ctttattattaaggaaaaata 98539
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>gb|AC130360.4| Homo sapiens chromosome 8, clone RP11-287P18, complete sequence
          Length = 171474

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 28    ctttattattaaggaaaaata 48
             |||||||||||||||||||||
Sbjct: 24611 ctttattattaaggaaaaata 24631
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>gb|AF252831.2| Homo sapiens chromosome 8 clone SCb-177k12 map 8p22-p21, complete
            sequence
          Length = 115137

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 28   ctttattattaaggaaaaata 48
            |||||||||||||||||||||
Sbjct: 3404 ctttattattaaggaaaaata 3424
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>gb|AC105214.6| Homo sapiens chromosome 8, clone RP11-354G4, complete sequence
          Length = 158209

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 28     ctttattattaaggaaaaata 48
              |||||||||||||||||||||
Sbjct: 117468 ctttattattaaggaaaaata 117488
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>gb|AC026698.6| Homo sapiens chromosome 5 clone CTC-457H17, complete sequence
          Length = 192731

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 33    ttattaaggaaaaatagggca 53
             |||||||||||||||||||||
Sbjct: 21407 ttattaaggaaaaatagggca 21427
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>gb|AC005406.2| Homo sapiens clone b128f11, complete sequence
          Length = 226345

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 33     ttattaaggaaaaatagggca 53
              |||||||||||||||||||||
Sbjct: 171385 ttattaaggaaaaatagggca 171365
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>gb|AC130366.5| Homo sapiens chromosome 8, clone RP11-1236K1, complete sequence
          Length = 178000

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 28    ctttattattaaggaaaaata 48
             |||||||||||||||||||||
Sbjct: 40990 ctttattattaaggaaaaata 41010
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>gb|AC010598.6| Homo sapiens chromosome 5 clone CTC-560O9, complete sequence
          Length = 174551

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 33    ttattaaggaaaaatagggca 53
             |||||||||||||||||||||
Sbjct: 10840 ttattaaggaaaaatagggca 10820
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>gb|AC130339.12| Homo sapiens chromosome 8, clone RP13-941O14, complete sequence
          Length = 173255

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 28    ctttattattaaggaaaaata 48
             |||||||||||||||||||||
Sbjct: 47754 ctttattattaaggaaaaata 47774
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>gb|AC134683.9| Homo sapiens chromosome 8, clone RP11-1175L4, complete sequence
          Length = 172084

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 28     ctttattattaaggaaaaata 48
              |||||||||||||||||||||
Sbjct: 161360 ctttattattaaggaaaaata 161340
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>gb|AC134395.7| Homo sapiens chromosome 8, clone RP11-739E3, complete sequence
          Length = 178401

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 28     ctttattattaaggaaaaata 48
              |||||||||||||||||||||
Sbjct: 158204 ctttattattaaggaaaaata 158184
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>gb|AC130379.8| Homo sapiens chromosome 17, clone RP13-383M5, complete sequence
          Length = 195488

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 28     ctttattattaaggaaaaata 48
              |||||||||||||||||||||
Sbjct: 158553 ctttattattaaggaaaaata 158573
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>gb|U96306.1|SSU96306 Sus scrofa prolactin receptor (PRLR) gene, partial cds
          Length = 449

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 324 gccgtggtgaagctggccagg 344
           |||||||||||||||||||||
Sbjct: 214 gccgtggtgaagctggccagg 194
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>gb|AC130365.5| Homo sapiens chromosome 8, clone RP11-1195F20, complete sequence
          Length = 171639

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 28    ctttattattaaggaaaaata 48
             |||||||||||||||||||||
Sbjct: 30219 ctttattattaaggaaaaata 30239
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>gb|AC117621.7| Mus musculus chromosome 8, clone RP23-114B10, complete sequence
          Length = 214933

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    attaaggaaaaatagggcac 54
             ||||||||||||||||||||
Sbjct: 38768 attaaggaaaaatagggcac 38749
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>gb|AC007035.3| Homo sapiens BAC clone RP11-104I19 from 7, complete sequence
          Length = 180397

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 122    aatttactcaaacctagaaactgg 145
              ||||||| ||||||||||||||||
Sbjct: 153371 aatttacacaaacctagaaactgg 153394
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>gb|AC146161.2| Pan troglodytes BAC clone RP43-1G6 from 7, complete sequence
          Length = 205885

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 122    aatttactcaaacctagaaactgg 145
              ||||||| ||||||||||||||||
Sbjct: 205401 aatttacacaaacctagaaactgg 205378
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>emb|AL139818.15| Human DNA sequence from clone RP11-311B18 on chromosome 10 Contains a
             novel gene, complete sequence
          Length = 103124

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    attattaaggaaaaataggg 51
             ||||||||||||||||||||
Sbjct: 95828 attattaaggaaaaataggg 95809
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>emb|AL138772.8| Human DNA sequence from clone RP4-576A20 on chromosome 10, complete
            sequence
          Length = 55835

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 71   aacaattaaaatctatgctc 90
            ||||||||||||||||||||
Sbjct: 7066 aacaattaaaatctatgctc 7085
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>emb|AL031054.1|HS48G12 Human DNA sequence from clone RP1-48G12 on chromosome Xq27.1-27.3
             Contains a CpG island, complete sequence
          Length = 199016

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 115   ataaatcaatttactcaaacctag 138
             ||||||||||||||||||| ||||
Sbjct: 49631 ataaatcaatttactcaaatctag 49608
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>gb|AC162797.6| Mus musculus chromosome 8, clone RP23-293E17, complete sequence
          Length = 142444

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    attaaggaaaaatagggcac 54
             ||||||||||||||||||||
Sbjct: 65886 attaaggaaaaatagggcac 65867
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>gb|AC131956.1| Homo sapiens BAC clone RP11-793B23 from 4, complete sequence
          Length = 195404

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     tttattattaaggaaaaata 48
              ||||||||||||||||||||
Sbjct: 167485 tttattattaaggaaaaata 167466
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>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16
          Length = 349442

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 324    gccgtggtgaagctggccag 343
              ||||||||||||||||||||
Sbjct: 247443 gccgtggtgaagctggccag 247462
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>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16
          Length = 346274

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 324    gccgtggtgaagctggccag 343
              ||||||||||||||||||||
Sbjct: 281491 gccgtggtgaagctggccag 281472
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>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12
          Length = 349726

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   gccgtggtgaagctggccag 343
             ||||||||||||||||||||
Sbjct: 99234 gccgtggtgaagctggccag 99253
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>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7
          Length = 349122

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 315   ttggtcgccgccgtggtgaa 334
             ||||||||||||||||||||
Sbjct: 55465 ttggtcgccgccgtggtgaa 55484
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>gb|AC011466.6| Homo sapiens chromosome 19 clone CTC-453G23, complete sequence
          Length = 167272

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      caaaataaaagcattatatg 27
              ||||||||||||||||||||
Sbjct: 163258 caaaataaaagcattatatg 163239
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>gb|AC092291.3| Homo sapiens chromosome 16 clone CTD-2502C11, complete sequence
          Length = 194551

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 14     aaaagcattatatgctttattatt 37
              |||||||||||||||||| |||||
Sbjct: 129482 aaaagcattatatgcttttttatt 129459
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>gb|AC009167.9| Homo sapiens chromosome 16 clone RP11-82O18, complete sequence
          Length = 193633

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 14     aaaagcattatatgctttattatt 37
              |||||||||||||||||| |||||
Sbjct: 185815 aaaagcattatatgcttttttatt 185838
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>gb|AC069019.8|AC069019 Mus musculus  BAC RP23-455N13 (Roswell Park Cancer Institute Mouse BAC
              Library) complete sequence
          Length = 196175

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 9      aaaataaaagcattatatgc 28
              ||||||||||||||||||||
Sbjct: 120544 aaaataaaagcattatatgc 120563
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>gb|AF279874.3| Homo sapiens chromosome 8 clone CTD-2351C9 map q21-q23, complete
             sequence
          Length = 109808

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   atgatttcactcataaatca 122
             ||||||||||||||||||||
Sbjct: 16336 atgatttcactcataaatca 16317
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>gb|AC008392.6|AC008392 Homo sapiens chromosome 19 clone CTC-241F20, complete sequence
          Length = 91842

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    caaaataaaagcattatatg 27
            ||||||||||||||||||||
Sbjct: 2105 caaaataaaagcattatatg 2086
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>gb|AY920365.1| HIV-1 isolate Dj410 from Djibouti nonfunctional pol protein (pol)
          gene, partial sequence
          Length = 401

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 4  acgacaaaataaaagcatta 23
          ||||||||||||||||||||
Sbjct: 20 acgacaaaataaaagcatta 39
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 251     gagcttgccctgctcctgca 270
               ||||||||||||||||||||
Sbjct: 1970105 gagcttgccctgctcctgca 1970124
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>emb|CR394550.5| Zebrafish DNA sequence from clone CH211-231O11 in linkage group 10,
              complete sequence
          Length = 170825

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     agcattatatgctttattat 36
              ||||||||||||||||||||
Sbjct: 140830 agcattatatgctttattat 140849
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>emb|BX284626.3| Mouse DNA sequence from clone RP23-76P19 on chromosome 11, complete
             sequence
          Length = 182810

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     aaaataaaagcattatatgc 28
             ||||||||||||||||||||
Sbjct: 94554 aaaataaaagcattatatgc 94535
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>gb|AC167663.3| Culex pipiens quinquefasciatus, clone Culex pipiens
            quinquefasciatus-3940143D9, complete sequence
          Length = 118759

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 364  tggcgatctgctcgtcgaag 383
            ||||||||||||||||||||
Sbjct: 5058 tggcgatctgctcgtcgaag 5077
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>gb|AC167560.3| Culex pipiens quinquefasciatus, clone Culex pipiens
            quinquefasciatus-3940139D9, complete sequence
          Length = 118752

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 364  tggcgatctgctcgtcgaag 383
            ||||||||||||||||||||
Sbjct: 5058 tggcgatctgctcgtcgaag 5077
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>gb|AC103359.6| Mus musculus chromosome 8, clone RP24-365B9, complete sequence
          Length = 178620

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 200    cttgaatccttggttcctgg 219
              ||||||||||||||||||||
Sbjct: 115713 cttgaatccttggttcctgg 115732
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>emb|AL592224.17| Mouse DNA sequence from clone RP23-174G1 on chromosome 1, complete
              sequence
          Length = 217775

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     tttattattaaggaaaaata 48
              ||||||||||||||||||||
Sbjct: 137763 tttattattaaggaaaaata 137782
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>gb|AC167664.4| Culex pipiens quinquefasciatus, clone Culex pipiens
              quinquefasciatus-3940124D9, complete sequence
          Length = 118889

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 364    tggcgatctgctcgtcgaag 383
              ||||||||||||||||||||
Sbjct: 113701 tggcgatctgctcgtcgaag 113682


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,882,492
Number of Sequences: 3902068
Number of extensions: 3882492
Number of successful extensions: 112105
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 111916
Number of HSP's gapped (non-prelim): 189
length of query: 383
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 361
effective length of database: 17,147,199,772
effective search space: 6190139117692
effective search space used: 6190139117692
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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