ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart56e02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY104192.1| Zea mays PCO077725 mRNA sequence 250 4e-63
2dbj|AK069095.1| Oryza sativa (japonica cultivar-group) cDNA clon... 218 1e-53
3dbj|AK060464.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 6e-31
4gb|M55191.1|POTPFPB Potato pyrophosphate-fructose 6-phosphate 1-... 143 6e-31
5gb|BT012702.1| Lycopersicon esculentum clone 113577R, mRNA sequence 127 4e-26
6ref|NM_101072.3| Arabidopsis thaliana 6-phosphofructokinase AT1G... 107 3e-20
7gb|AY093260.1| Arabidopsis thaliana similar to pyrophosphate-dep... 107 3e-20
8gb|AY062473.1| Arabidopsis thaliana Similar to pyrophosphate-dep... 107 3e-20
9gb|AF095520.1|AF095520 Citrus X paradisi pyrophosphate-dependent... 105 1e-19
10dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 100 8e-18
11dbj|AP004027.3| Oryza sativa (japonica cultivar-group) genomic D... 100 8e-18
12ref|NM_116642.2| Arabidopsis thaliana 6-phosphofructokinase AT4G... 92 2e-15
13emb|Z32850.1|RCPDPBS R.communis gene for pyrophosphate-dependent... 58 3e-05
14gb|DQ239686.1| Brassica napus pyrophosphate-dependent phosphofru... 54 4e-04
15gb|AC150441.2| Medicago truncatula chromosome 2 BAC clone mth2-1... 52 0.002
16emb|AL161499.2|ATCHRIV11 Arabidopsis thaliana DNA chromosome 4, ... 48 0.028
17gb|AF075598.1|T24H24 Arabidopsis thaliana BAC T24H24 48 0.028
18gb|L77082.1|TOBCDC2 Nicotiana tabacum cdc2 mRNA, complete cds 48 0.028
19ref|XM_221882.3| PREDICTED: Rattus norvegicus guanylate binding ... 44 0.43
20gb|AC002131.1|F12F1 Arabidopsis thaliana chromosome 1 BAC F12F1 ... 44 0.43
21gb|AC174376.8| Medicago truncatula clone mth2-56h21, complete se... 42 1.7
22gb|AC166256.5| Mus musculus BAC RP23-440F21 (Roswell Park Cance... 42 1.7
23gb|AC127249.4| Mus musculus BAC clone RP24-475B8 from chromosome... 42 1.7
24emb|CR940309.6| M.truncatula DNA sequence from clone MTH2-10C20 ... 42 1.7
25gb|AC140219.3| Mus musculus BAC clone RP24-270J6 from chromosome... 42 1.7
26gb|AC121803.3| Mus musculus BAC clone RP23-441A23 from chromosom... 42 1.7
27gb|AC125389.33| Medicago truncatula clone mth2-12a18, complete s... 42 1.7
28gb|AC127021.25| Medicago truncatula clone mth2-5e5, complete seq... 42 1.7
29gb|AC148406.12| Medicago truncatula clone mth2-46e9, complete se... 42 1.7
30emb|AL356275.20| Human DNA sequence from clone RP11-328D5 on chr... 42 1.7
31emb|AL355333.18| Human DNA sequence from clone RP11-575N15 on ch... 42 1.7
32gb|AC164638.4| Mus musculus BAC clone RP23-198N12 from chromosom... 42 1.7
33gb|AC153121.15| Medicago truncatula clone mth2-80o14, complete s... 42 1.7
34gb|AC152351.7| Medicago truncatula clone mth2-75b20, complete se... 42 1.7
35gb|AC146589.31| Medicago truncatula clone mth2-145o21, complete ... 42 1.7
36gb|AC148756.2| Medicago truncatula clone mth2-22d18, complete se... 42 1.7
37gb|AC095053.3| Homo sapiens BAC clone RP11-352E8 from 4, complet... 42 1.7
38gb|AC084393.20| Homo sapiens 12q BAC RP11-453E3 (Roswell Park Ca... 42 1.7
39gb|AC156276.6| Mus musculus 10 BAC RP24-323L12 (Roswell Park Can... 42 1.7
40gb|AC009480.4| Homo sapiens BAC clone RP11-295N18 from 2, comple... 42 1.7
41gb|AC151278.2| Mus musculus BAC clone RP24-164I15 from chromosom... 42 1.7
42emb|AJ617333.1| Pichia acaciae plasmid pPac1-2 ORF1, ORF2, ORF3 ... 42 1.7
43emb|AL035091.2|HS88L2 Human DNA sequence from clone XX-D88L2 on ... 42 1.7
44gb|U02596.1|PAU02596 Pichia acaciae NRRL Y-18665 plasmid pPac1-2... 42 1.7
45gb|AC165964.3| Mus musculus BAC clone RP23-334H24 from chromosom... 40 6.7
46gb|AC161045.2| Mus musculus BAC clone RP24-326E14 from chromosom... 40 6.7
47gb|AC113547.27| Mus musculus chromosome 12, clone RP23-263J2, co... 40 6.7
48gb|AC112925.8| Mus musculus chromosome 5, clone RP23-136I18, com... 40 6.7
49gb|AY136628.2| Petunia integrifolia subsp. inflata S2 self-incom... 40 6.7
50ref|XM_595012.2| PREDICTED: Bos taurus similar to IGF-II mRNA-bi... 40 6.7
51gb|BC016509.1| Homo sapiens secretory carrier membrane protein 4... 40 6.7
52ref|XM_587285.2| PREDICTED: Bos taurus similar to SH2 domain con... 40 6.7
53ref|XM_882760.1| PREDICTED: Bos taurus similar to SH2 domain con... 40 6.7
54gb|AC118640.8| Mus musculus chromosome 15, clone RP24-112A20, co... 40 6.7
55gb|AC165965.3| Mus musculus BAC clone RP23-307L24 from chromosom... 40 6.7
56gb|AC163273.4| Mus musculus chromosome 5, clone RP24-396E18, com... 40 6.7
57gb|AC122882.4| Mus musculus BAC clone RP23-80M17 from chromosome... 40 6.7
58gb|AC133933.4| Mus musculus BAC clone RP24-333C16 from chromosom... 40 6.7
59emb|AJ270784.1|HHI270784 Hippoglossus hippoglossus microsatellit... 40 6.7
60gb|AC130721.3| Mus musculus BAC clone RP24-333B3 from chromosome... 40 6.7
61gb|AC119035.5| Homo sapiens 3 BAC RP11-445E17 (Roswell Park Canc... 40 6.7
62gb|AE014301.1| Homo sapiens chromosome 13q34 schizophrenia regio... 40 6.7
63gb|BC007958.2| Homo sapiens secretory carrier membrane protein 4... 40 6.7
64gb|AC126784.11| Medicago truncatula clone mth2-36b12, complete s... 40 6.7
65gb|AC159626.2| Mus musculus BAC clone RP24-209A23 from chromosom... 40 6.7
66emb|AL731551.9| Human DNA sequence from clone RP11-337F21 on chr... 40 6.7
67emb|AL355807.11| Human DNA sequence from clone RP11-487A20 on ch... 40 6.7
68emb|AL031230.1|HS73M23 Human DNA sequence from clone RP1-73M23 o... 40 6.7
69emb|AL022726.1|HS625H18 Human DNA sequence from clone RP4-625H18... 40 6.7
70emb|CR942205.4| Human DNA sequence from clone RP11-948M1 on chro... 40 6.7
71ref|XM_787074.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.7
72emb|X87940.1|SADNAIF2 S.aurantiaca DNA for initiation factor 2 40 6.7
73emb|AL591426.17| Mouse DNA sequence from clone RP23-345E8 on chr... 40 6.7
74emb|CR388386.12| Zebrafish DNA sequence from clone DKEY-253N6 in... 40 6.7
75gb|AC068631.16| Homo sapiens 3 BAC RP11-134F2 (Roswell Park Canc... 40 6.7
76dbj|AK091166.1| Homo sapiens cDNA FLJ33847 fis, clone CTONG20053... 40 6.7
77dbj|AK074967.1| Homo sapiens cDNA FLJ90486 fis, clone NT2RP30033... 40 6.7
78gb|DP000062.1| Sus scrofa target 117 genomic scaffold 40 6.7
79gb|AC117414.3| Homo sapiens 3 BAC RP11-48F14 (Roswell Park Cance... 40 6.7
80gb|AC121318.17| Mus musculus chromosome 1, clone RP24-377P1, com... 40 6.7
81gb|BC016685.1|BC016685 Homo sapiens, clone IMAGE:4214718, mRNA 40 6.7
82gb|AC113015.12| Mus musculus chromosome 1, clone RP23-180E19, co... 40 6.7
83gb|AC151535.2| Mus musculus BAC clone RP23-213M8 from chromosome... 40 6.7
84gb|AC154190.2| Mus musculus BAC clone RP24-465P16 from chromosom... 40 6.7
85emb|BX088698.22| Mouse DNA sequence from clone RP23-309D15 on ch... 40 6.7
86dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
87gb|AC087625.12| Homo sapiens chromosome 8, clone RP11-525O22, co... 40 6.7
88gb|AC087273.5| Homo sapiens chromosome 8, clone RP11-156K13, com... 40 6.7
89dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
90emb|BX511200.2|RN52A6 Rattus norvegicus chromosome 1 BAC RP32-52... 40 6.7
91ref|XM_311551.2| Anopheles gambiae str. PEST ENSANGP00000010229 ... 40 6.7
92gb|AC154783.2| Mus musculus BAC clone RP24-466C8 from 12, comple... 40 6.7
93gb|BC062598.1| Homo sapiens secretory carrier membrane protein 4... 40 6.7
94gb|AC154300.2| Mus musculus BAC clone RP23-390F4 from 12, comple... 40 6.7
95emb|BX649585.4| Zebrafish DNA sequence from clone CH211-123B7 in... 40 6.7
96dbj|AP006303.1| Homo sapiens genomic DNA, chromosome 8 clone:RP1... 40 6.7
97emb|CT030235.12| Mouse DNA sequence from clone RP23-240F19 on ch... 40 6.7
98emb|CT010486.13| Mouse DNA sequence from clone RP23-129J22 on ch... 40 6.7
99gb|AC122201.4| Mus musculus BAC clone RP23-64I9 from 6, complete... 40 6.7
100gb|AC170807.2| Mus musculus BAC clone RP23-374I2 from chromosome... 40 6.7
101gb|AC154126.2| Mus musculus BAC clone RP23-471O11 from chromosom... 40 6.7
102gb|AC170884.3| Mus musculus BAC clone RP24-111L17 from chromosom... 40 6.7
103dbj|AB020866.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-onco... 40 6.7 
>gb|AY104192.1| Zea mays PCO077725 mRNA sequence
          Length = 1688

 Score =  250 bits (126), Expect = 4e-63
 Identities = 195/218 (89%)
 Strand = Plus / Minus

                                                                        
Query: 268  tctctatatctcggcgccgagctccaacatcaaggtgtggttcgaggcgtcgcttccagg 327
            |||||||| ||| || ||||| |||| ||||||||||||||||||| | |||||||||||
Sbjct: 1335 tctctataactcagcaccgagttccagcatcaaggtgtggttcgagtcatcgcttccagg 1276

                                                                        
Query: 328  gccgctgaactggatgggaccggggctgatgtatcggttcttgatggcccattcatcccg 387
            |||||||||||||||||| || ||||||||||||| ||||||||||||||| ||||||| 
Sbjct: 1275 gccgctgaactggatggggccagggctgatgtatctgttcttgatggcccactcatccct 1216

                                                                        
Query: 388  catcgaggcaaacttcttaaatggcgcagcatcaagctcaaccatagccttcttgatcac 447
            || ||| ||| | ||||| || || |||||||| || || ||||||||||||||||||||
Sbjct: 1215 caacgatgcatatttcttgaaaggtgcagcatcgagttccaccatagccttcttgatcac 1156

                                                  
Query: 448  tggcttgaacttgccatgcctcctctcaacatccatca 485
            ||||||||||||||| ||||||||||||||||||||||
Sbjct: 1155 tggcttgaacttgccgtgcctcctctcaacatccatca 1118
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>dbj|AK069095.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004M14, full
            insert sequence
          Length = 1960

 Score =  218 bits (110), Expect = 1e-53
 Identities = 194/222 (87%)
 Strand = Plus / Minus

                                                                        
Query: 267  ctctctatatctcggcgccgagctccaacatcaaggtgtggttcgaggcgtcgcttccag 326
            ||||||||  |||||||||||| ||||||||||||||||||||||   ||| ||||||||
Sbjct: 1776 ctctctatgcctcggcgccgagttccaacatcaaggtgtggttcgcatcgttgcttccag 1717

                                                                        
Query: 327  ggccgctgaactggatgggaccggggctgatgtatcggttcttgatggcccattcatccc 386
            |||| ||||||||||||||||| |||||||||||  ||||||||| || ||| ||||| |
Sbjct: 1716 ggccactgaactggatgggaccagggctgatgtaatggttcttgagggaccactcatctc 1657

                                                                        
Query: 387  gcatcgaggcaaacttcttaaatggcgcagcatcaagctcaaccatagccttcttgatca 446
            |||  || |||||||||||||| || ||  | ||||| || |||||||||||||||||||
Sbjct: 1656 gcaatgaagcaaacttcttaaacggtgccccgtcaagttccaccatagccttcttgatca 1597

                                                      
Query: 447  ctggcttgaacttgccatgcctcctctcaacatccatcaacg 488
            |||||||| |||| || |||||||||||||||||||||||||
Sbjct: 1596 ctggcttgtactttccgtgcctcctctcaacatccatcaacg 1555
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>dbj|AK060464.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-C08, full
           insert sequence
          Length = 453

 Score =  143 bits (72), Expect = 6e-31
 Identities = 147/172 (85%)
 Strand = Plus / Minus

                                                                       
Query: 267 ctctctatatctcggcgccgagctccaacatcaaggtgtggttcgaggcgtcgcttccag 326
           ||||||||  |||||||||||| ||||||||||||||||||||||   ||| ||||||||
Sbjct: 172 ctctctatgcctcggcgccgagttccaacatcaaggtgtggttcgcatcgttgcttccag 113

                                                                       
Query: 327 ggccgctgaactggatgggaccggggctgatgtatcggttcttgatggcccattcatccc 386
           |||| ||||||||||||||||| |||||||||||  ||||||||| || ||| ||||| |
Sbjct: 112 ggccactgaactggatgggaccagggctgatgtaatggttcttgagggaccactcatctc 53

                                                               
Query: 387 gcatcgaggcaaacttcttaaatggcgcagcatcaagctcaaccatagcctt 438
           |||  || |||||||||||||| || ||  | ||||| || |||||||||||
Sbjct: 52  gcaatgaagcaaacttcttaaacggtgccccgtcaagttccaccatagcctt 1
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>gb|M55191.1|POTPFPB Potato pyrophosphate-fructose 6-phosphate 1-phosphotransferase (PFP)
            beta-subunit mRNA, complete cds
          Length = 1986

 Score =  143 bits (72), Expect = 6e-31
 Identities = 132/152 (86%)
 Strand = Plus / Minus

                                                                        
Query: 341  atgggaccggggctgatgtatcggttcttgatggcccattcatcccgcatcgaggcaaac 400
            |||||||| ||| | ||||||||||| || |  |||||||| |||| | | || ||||| 
Sbjct: 1676 atgggacctgggttaatgtatcggttgttaagagcccattcttccctctttgaagcaaat 1617

                                                                        
Query: 401  ttcttaaatggcgcagcatcaagctcaaccatagccttcttgatcactggcttgaacttg 460
            ||||| ||||| ||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1616 ttcttgaatggagcaccttcaagctcaaccatagccttcttgatcactggcttgaacttg 1557

                                            
Query: 461  ccatgcctcctctcaacatccatcaacgcagt 492
            ||||| |||||||| || ||||||||||||||
Sbjct: 1556 ccatgtctcctctctacgtccatcaacgcagt 1525
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>gb|BT012702.1| Lycopersicon esculentum clone 113577R, mRNA sequence
          Length = 1952

 Score =  127 bits (64), Expect = 4e-26
 Identities = 130/152 (85%)
 Strand = Plus / Minus

                                                                        
Query: 341  atgggaccggggctgatgtatcggttcttgatggcccattcatcccgcatcgaggcaaac 400
            |||||||| ||| | ||||||||||| || |  |||||||| |||| | | || ||||| 
Sbjct: 1715 atgggacctgggttaatgtatcggttgttaagagcccattcttccctctttgaagcaaat 1656

                                                                        
Query: 401  ttcttaaatggcgcagcatcaagctcaaccatagccttcttgatcactggcttgaacttg 460
            ||||| ||||| ||| |  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1655 ttcttgaatggagcacctccaagctcaaccatagccttcttgatcactggcttgaacttg 1596

                                            
Query: 461  ccatgcctcctctcaacatccatcaacgcagt 492
            ||||| |||||||| || |||||||| |||||
Sbjct: 1595 ccatgtctcctctctacgtccatcaatgcagt 1564
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>ref|NM_101072.3| Arabidopsis thaliana 6-phosphofructokinase AT1G12000 mRNA, complete
            cds
          Length = 2072

 Score =  107 bits (54), Expect = 3e-20
 Identities = 129/154 (83%)
 Strand = Plus / Minus

                                                                        
Query: 333  tgaactggatgggaccggggctgatgtatcggttcttgatggcccattcatcccgcatcg 392
            |||| ||||| ||||| |||||||||||||||||||| |  |||||||| || ||||  |
Sbjct: 1750 tgaattggatcggacctgggctgatgtatcggttcttcaatgcccattcttcacgcagtg 1691

                                                                        
Query: 393  aggcaaacttcttaaatggcgcagcatcaagctcaaccatagccttcttgatcactggct 452
            | || || ||||||||||| ||| | ||||| || ||||| || ||||||||||| ||||
Sbjct: 1690 atgcgaatttcttaaatggtgcaccttcaagttccaccattgctttcttgatcacaggct 1631

                                              
Query: 453  tgaacttgccatgcctcctctcaacatccatcaa 486
            ||||||| || || |||||||| |||||||||||
Sbjct: 1630 tgaacttaccgtgtctcctctcgacatccatcaa 1597
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>gb|AY093260.1| Arabidopsis thaliana similar to pyrophosphate-dependent
            phosphofuctokinase beta subunit (At1g12000) mRNA,
            complete cds
          Length = 1733

 Score =  107 bits (54), Expect = 3e-20
 Identities = 129/154 (83%)
 Strand = Plus / Minus

                                                                        
Query: 333  tgaactggatgggaccggggctgatgtatcggttcttgatggcccattcatcccgcatcg 392
            |||| ||||| ||||| |||||||||||||||||||| |  |||||||| || ||||  |
Sbjct: 1642 tgaattggatcggacctgggctgatgtatcggttcttcaatgcccattcttcacgcagtg 1583

                                                                        
Query: 393  aggcaaacttcttaaatggcgcagcatcaagctcaaccatagccttcttgatcactggct 452
            | || || ||||||||||| ||| | ||||| || ||||| || ||||||||||| ||||
Sbjct: 1582 atgcgaatttcttaaatggtgcaccttcaagttccaccattgctttcttgatcacaggct 1523

                                              
Query: 453  tgaacttgccatgcctcctctcaacatccatcaa 486
            ||||||| || || |||||||| |||||||||||
Sbjct: 1522 tgaacttaccgtgtctcctctcgacatccatcaa 1489
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>gb|AY062473.1| Arabidopsis thaliana Similar to pyrophosphate-dependent
            phosphofuctokinase beta subunit (At1g12000; F12F1.13)
            mRNA, complete cds
          Length = 1965

 Score =  107 bits (54), Expect = 3e-20
 Identities = 129/154 (83%)
 Strand = Plus / Minus

                                                                        
Query: 333  tgaactggatgggaccggggctgatgtatcggttcttgatggcccattcatcccgcatcg 392
            |||| ||||| ||||| |||||||||||||||||||| |  |||||||| || ||||  |
Sbjct: 1750 tgaattggatcggacctgggctgatgtatcggttcttcaatgcccattcttcacgcagtg 1691

                                                                        
Query: 393  aggcaaacttcttaaatggcgcagcatcaagctcaaccatagccttcttgatcactggct 452
            | || || ||||||||||| ||| | ||||| || ||||| || ||||||||||| ||||
Sbjct: 1690 atgcgaatttcttaaatggtgcaccttcaagttccaccattgctttcttgatcacaggct 1631

                                              
Query: 453  tgaacttgccatgcctcctctcaacatccatcaa 486
            ||||||| || || |||||||| |||||||||||
Sbjct: 1630 tgaacttaccgtgtctcctctcgacatccatcaa 1597
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>gb|AF095520.1|AF095520 Citrus X paradisi pyrophosphate-dependent phosphofructokinase beta
            subunit (PPi-PFKb) mRNA, complete cds
          Length = 2034

 Score =  105 bits (53), Expect = 1e-19
 Identities = 128/153 (83%)
 Strand = Plus / Minus

                                                                        
Query: 344  ggaccggggctgatgtatcggttcttgatggcccattcatcccgcatcgaggcaaacttc 403
            ||||| || |||||||| || || ||||  ||||| ||||| ||||| ||  ||||||||
Sbjct: 1681 ggaccaggactgatgtagcgattattgagagcccactcatctcgcatggatacaaacttc 1622

                                                                        
Query: 404  ttaaatggcgcagcatcaagctcaaccatagccttcttgatcactggcttgaacttgcca 463
            || ||||| | | ||||||| || ||||| |||||||| ||||| |||||||||||||||
Sbjct: 1621 ttgaatggtgtaccatcaagttccaccatcgccttcttaatcacaggcttgaacttgcca 1562

                                             
Query: 464  tgcctcctctcaacatccatcaacgcagtcagt 496
            || |||||||| |||||||| || |||||||||
Sbjct: 1561 tgtctcctctctacatccattaatgcagtcagt 1529
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 74/82 (90%)
 Strand = Plus / Plus

                                                                           
Query: 267     ctctctatatctcggcgccgagctccaacatcaaggtgtggttcgaggcgtcgcttccag 326
               ||||||||  |||||||||||| ||||||||||||||||||||||   ||| ||||||||
Sbjct: 7660088 ctctctatgcctcggcgccgagttccaacatcaaggtgtggttcgcatcgttgcttccag 7660147

                                     
Query: 327     ggccgctgaactggatgggacc 348
               |||| |||||||||||||||||
Sbjct: 7660148 ggccactgaactggatgggacc 7660169



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                        
Query: 419     tcaagctcaaccatagccttcttgatcactggcttgaactt 459
               ||||| || ||||||||||||||||||||||||||| ||||
Sbjct: 7660420 tcaagttccaccatagccttcttgatcactggcttgtactt 7660460



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                        
Query: 464     tgcctcctctcaacatccatcaacg 488
               |||||||||||||||||||||||||
Sbjct: 7660685 tgcctcctctcaacatccatcaacg 7660709



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                          
Query: 350     gggctgatgtatcggttcttgatggcccattcatcccgcatcgaggcaaacttcttaaa 408
               |||||||||||  ||||||||| || ||| ||||| ||||  || ||||||||||||||
Sbjct: 7660262 gggctgatgtaatggttcttgagggaccactcatctcgcaatgaagcaaacttcttaaa 7660320
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>dbj|AP004027.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1136_C11
          Length = 124827

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 74/82 (90%)
 Strand = Plus / Plus

                                                                         
Query: 267   ctctctatatctcggcgccgagctccaacatcaaggtgtggttcgaggcgtcgcttccag 326
             ||||||||  |||||||||||| ||||||||||||||||||||||   ||| ||||||||
Sbjct: 83343 ctctctatgcctcggcgccgagttccaacatcaaggtgtggttcgcatcgttgcttccag 83402

                                   
Query: 327   ggccgctgaactggatgggacc 348
             |||| |||||||||||||||||
Sbjct: 83403 ggccactgaactggatgggacc 83424



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                      
Query: 419   tcaagctcaaccatagccttcttgatcactggcttgaactt 459
             ||||| || ||||||||||||||||||||||||||| ||||
Sbjct: 83675 tcaagttccaccatagccttcttgatcactggcttgtactt 83715



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 464   tgcctcctctcaacatccatcaacg 488
             |||||||||||||||||||||||||
Sbjct: 83940 tgcctcctctcaacatccatcaacg 83964



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                        
Query: 350   gggctgatgtatcggttcttgatggcccattcatcccgcatcgaggcaaacttcttaaa 408
             |||||||||||  ||||||||| || ||| ||||| ||||  || ||||||||||||||
Sbjct: 83517 gggctgatgtaatggttcttgagggaccactcatctcgcaatgaagcaaacttcttaaa 83575
to top
>ref|NM_116642.2| Arabidopsis thaliana 6-phosphofructokinase AT4G04040 mRNA, complete
            cds
          Length = 1947

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 88/102 (86%)
 Strand = Plus / Minus

                                                                        
Query: 395  gcaaacttcttaaatggcgcagcatcaagctcaaccatagccttcttgatcactggcttg 454
            ||||| |||||||| || ||| | ||||| ||||||||||| |||||||| || ||||||
Sbjct: 1634 gcaaatttcttaaacggtgcaccttcaagttcaaccatagctttcttgataacaggcttg 1575

                                                      
Query: 455  aacttgccatgcctcctctcaacatccatcaacgcagtcagt 496
            || || ||||| || ||||||||||||||||||| |||||||
Sbjct: 1574 aatttaccatgtcttctctcaacatccatcaacgaagtcagt 1533
to top
>emb|Z32850.1|RCPDPBS R.communis gene for pyrophosphate-dependent phosphofructokinase beta
            subunit
          Length = 5280

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 419  tcaagctcaaccatagccttcttgatcactggcttgaactt 459
            |||||||| ||||| |||||||||||||| |||||||||||
Sbjct: 4606 tcaagctccaccatcgccttcttgatcacaggcttgaactt 4566
to top
>gb|DQ239686.1| Brassica napus pyrophosphate-dependent phosphofructokinase-like
           gene, partial sequence
          Length = 428

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 350 gggctgatgtatcggttcttgatggcccattcatcccgcatcgaggcaaacttcttaaa 408
           |||||||||||||||||||| | ||||||||| || ||||  || ||||| ||||||||
Sbjct: 238 gggctgatgtatcggttcttcaaggcccattcctcgcgcagggatgcaaatttcttaaa 296
to top
>gb|AC150441.2| Medicago truncatula chromosome 2 BAC clone mth2-19l4, complete sequence
          Length = 120811

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 419   tcaagctcaaccatagccttcttgatcactggcttgaa 456
             |||||||| ||||| |||||||||||||| ||||||||
Sbjct: 88087 tcaagctccaccattgccttcttgatcacaggcttgaa 88050



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 373   ggcccattcatcccgcatcgaggcaaactt 402
             |||||||||||||||||  |||||||||||
Sbjct: 88243 ggcccattcatcccgcaatgaggcaaactt 88214
to top
>emb|AL161499.2|ATCHRIV11 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 11
          Length = 198022

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 461   ccatgcctcctctcaacatccatcaacgcagtcagt 496
             ||||| || ||||||||||||||||||| |||||||
Sbjct: 57126 ccatgtcttctctcaacatccatcaacgaagtcagt 57091



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 419   tcaagctcaaccatagccttcttgatcactggcttgaa 456
             ||||| ||||||||||| |||||||| || ||||||||
Sbjct: 57247 tcaagttcaaccatagctttcttgataacaggcttgaa 57210
to top
>gb|AF075598.1|T24H24 Arabidopsis thaliana BAC T24H24
          Length = 88848

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 461   ccatgcctcctctcaacatccatcaacgcagtcagt 496
             ||||| || ||||||||||||||||||| |||||||
Sbjct: 60309 ccatgtcttctctcaacatccatcaacgaagtcagt 60344



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 419   tcaagctcaaccatagccttcttgatcactggcttgaa 456
             ||||| ||||||||||| |||||||| || ||||||||
Sbjct: 60188 tcaagttcaaccatagctttcttgataacaggcttgaa 60225
to top
>gb|L77082.1|TOBCDC2 Nicotiana tabacum cdc2 mRNA, complete cds
          Length = 1379

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 45   aacaacttgaggggtggggtgggg 68
            ||||||||||||||||||||||||
Sbjct: 1159 aacaacttgaggggtggggtgggg 1136
to top
>ref|XM_221882.3| PREDICTED: Rattus norvegicus guanylate binding protein 1,
            interferon-inducible, 67kDa (predicted) (Gbp1_predicted),
            mRNA
          Length = 2343

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 225  aggaacaagaagaaaatttcaa 246
            ||||||||||||||||||||||
Sbjct: 2237 aggaacaagaagaaaatttcaa 2258
to top
>gb|AC002131.1|F12F1 Arabidopsis thaliana chromosome 1 BAC F12F1 sequence, complete sequence
          Length = 123386

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                         
Query: 350   gggctgatgtatcggttcttgatggcccattcatcccgcatcgaggcaaacttcttaaat 409
             |||||||||||||||||||| |  |||||||| || ||||  || || || |||||||||
Sbjct: 64301 gggctgatgtatcggttcttcaatgcccattcttcacgcagtgatgcgaatttcttaaat 64242

               
Query: 410   gg 411
             ||
Sbjct: 64241 gg 64240



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 419   tcaagctcaaccatagccttcttgatcactggcttgaactt 459
             ||||| || ||||| || ||||||||||| |||||||||||
Sbjct: 64149 tcaagttccaccattgctttcttgatcacaggcttgaactt 64109
to top
>gb|AC174376.8| Medicago truncatula clone mth2-56h21, complete sequence
          Length = 111561

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 128   acttaacccactccaactcaa 148
             |||||||||||||||||||||
Sbjct: 81258 acttaacccactccaactcaa 81238
to top
>gb|AC166256.5| Mus musculus  BAC RP23-440F21 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 181903

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 42     aaaaacaacttgaggggtggggtgggggt 70
              |||| ||||||| ||||||||||||||||
Sbjct: 171590 aaaagcaacttggggggtggggtgggggt 171618
to top
>gb|AC127249.4| Mus musculus BAC clone RP24-475B8 from chromosome 18, complete sequence
          Length = 137187

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 30    aaaattattgtcaaaaacaacttga 54
             |||||||||||||||||||| ||||
Sbjct: 51176 aaaattattgtcaaaaacaagttga 51200
to top
>emb|CR940309.6| M.truncatula DNA sequence from clone MTH2-10C20 on chromosome 3,
            complete sequence
          Length = 114380

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 128  acttaacccactccaactcaa 148
            |||||||||||||||||||||
Sbjct: 1298 acttaacccactccaactcaa 1318
to top
>gb|AC140219.3| Mus musculus BAC clone RP24-270J6 from chromosome 18, complete
            sequence
          Length = 119095

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 30   aaaattattgtcaaaaacaacttga 54
            |||||||||||||||||||| ||||
Sbjct: 2191 aaaattattgtcaaaaacaagttga 2167
to top
>gb|AC121803.3| Mus musculus BAC clone RP23-441A23 from chromosome 6, complete sequence
          Length = 211809

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 54    aggggtggggtgggggttgtt 74
             |||||||||||||||||||||
Sbjct: 50656 aggggtggggtgggggttgtt 50636
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>gb|AC125389.33| Medicago truncatula clone mth2-12a18, complete sequence
          Length = 143015

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 128   acttaacccactccaactcaa 148
             |||||||||||||||||||||
Sbjct: 57315 acttaacccactccaactcaa 57295
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>gb|AC127021.25| Medicago truncatula clone mth2-5e5, complete sequence
          Length = 139116

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 128   acttaacccactccaactcaa 148
             |||||||||||||||||||||
Sbjct: 14778 acttaacccactccaactcaa 14758
to top
>gb|AC148406.12| Medicago truncatula clone mth2-46e9, complete sequence
          Length = 110272

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 128   acttaacccactccaactcaa 148
             |||||||||||||||||||||
Sbjct: 22528 acttaacccactccaactcaa 22548
to top
>emb|AL356275.20| Human DNA sequence from clone RP11-328D5 on chromosome 1 Contains the
             5' end of a novel gene, a novel gene, the CD34 gene for
             CD34 antigen and the 3' end of the PLXNA2 gene for plexin
             A2, complete sequence
          Length = 198906

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 54    aggggtggggtgggggttgtt 74
             |||||||||||||||||||||
Sbjct: 25393 aggggtggggtgggggttgtt 25413
to top
>emb|AL355333.18| Human DNA sequence from clone RP11-575N15 on chromosome 10, complete
             sequence
          Length = 180545

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 388   catcgaggcaaacttcttaaa 408
             |||||||||||||||||||||
Sbjct: 77544 catcgaggcaaacttcttaaa 77524
to top
>gb|AC164638.4| Mus musculus BAC clone RP23-198N12 from chromosome 7, complete sequence
          Length = 242297

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 55     ggggtggggtgggggttgtta 75
              |||||||||||||||||||||
Sbjct: 187699 ggggtggggtgggggttgtta 187719
to top
>gb|AC153121.15| Medicago truncatula clone mth2-80o14, complete sequence
          Length = 115074

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 128  acttaacccactccaactcaa 148
            |||||||||||||||||||||
Sbjct: 1985 acttaacccactccaactcaa 1965
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>gb|AC152351.7| Medicago truncatula clone mth2-75b20, complete sequence
          Length = 111786

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 128   acttaacccactccaactcaa 148
             |||||||||||||||||||||
Sbjct: 45944 acttaacccactccaactcaa 45964
to top
>gb|AC146589.31| Medicago truncatula clone mth2-145o21, complete sequence
          Length = 125457

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 128   acttaacccactccaactcaa 148
             |||||||||||||||||||||
Sbjct: 73213 acttaacccactccaactcaa 73233
to top
>gb|AC148756.2| Medicago truncatula clone mth2-22d18, complete sequence
          Length = 107160

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 128   acttaacccactccaactcaa 148
             |||||||||||||||||||||
Sbjct: 75923 acttaacccactccaactcaa 75903
to top
>gb|AC095053.3| Homo sapiens BAC clone RP11-352E8 from 4, complete sequence
          Length = 112123

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 397    aaacttcttaaatggcgcagc 417
              |||||||||||||||||||||
Sbjct: 101378 aaacttcttaaatggcgcagc 101358
to top
>gb|AC084393.20| Homo sapiens 12q BAC RP11-453E3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 182489

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 54     aggggtggggtgggggttgtt 74
              |||||||||||||||||||||
Sbjct: 138353 aggggtggggtgggggttgtt 138373
to top
>gb|AC156276.6| Mus musculus 10 BAC RP24-323L12 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 199119

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 50    cttgaggggtggggtgggggt 70
             |||||||||||||||||||||
Sbjct: 84059 cttgaggggtggggtgggggt 84039
to top
>gb|AC009480.4| Homo sapiens BAC clone RP11-295N18 from 2, complete sequence
          Length = 188353

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 463    atgcctcctctcaacatccat 483
              |||||||||||||||||||||
Sbjct: 140490 atgcctcctctcaacatccat 140510
to top
>gb|AC151278.2| Mus musculus BAC clone RP24-164I15 from chromosome 17, complete
             sequence
          Length = 175960

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 55    ggggtggggtgggggttgtta 75
             |||||||||||||||||||||
Sbjct: 72107 ggggtggggtgggggttgtta 72087
to top
>emb|AJ617333.1| Pichia acaciae plasmid pPac1-2 ORF1, ORF2, ORF3 and ORF4
          Length = 6785

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 52   tgaggggtggggtgggggttg 72
            |||||||||||||||||||||
Sbjct: 6738 tgaggggtggggtgggggttg 6758



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 52 tgaggggtggggtgggggttg 72
          |||||||||||||||||||||
Sbjct: 48 tgaggggtggggtgggggttg 28
to top
>emb|AL035091.2|HS88L2 Human DNA sequence from clone XX-D88L2 on chromosome 1q32.2-32.3,
             complete sequence
          Length = 160771

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 54    aggggtggggtgggggttgtt 74
             |||||||||||||||||||||
Sbjct: 23505 aggggtggggtgggggttgtt 23525
to top
>gb|U02596.1|PAU02596 Pichia acaciae NRRL Y-18665 plasmid pPac1-2 killer toxin gene,
          complete cds
          Length = 1716

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 52 tgaggggtggggtgggggttg 72
          |||||||||||||||||||||
Sbjct: 48 tgaggggtggggtgggggttg 28
to top
>gb|AC165964.3| Mus musculus BAC clone RP23-334H24 from chromosome 8, complete sequence
          Length = 233538

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    ttgaggggtggggtgggggt 70
             ||||||||||||||||||||
Sbjct: 97500 ttgaggggtggggtgggggt 97519
to top
>gb|AC161045.2| Mus musculus BAC clone RP24-326E14 from chromosome 13, complete sequence
          Length = 150469

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     ggggtggggtgggggttgtt 74
              ||||||||||||||||||||
Sbjct: 149671 ggggtggggtgggggttgtt 149652
to top
>gb|AC113547.27| Mus musculus chromosome 12, clone RP23-263J2, complete sequence
          Length = 197242

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   tctcaaaactgcaaggaaca 231
             ||||||||||||||||||||
Sbjct: 10339 tctcaaaactgcaaggaaca 10320
to top
>gb|AC112925.8| Mus musculus chromosome 5, clone RP23-136I18, complete sequence
          Length = 195433

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 148   acatcttattaaacattcca 167
             ||||||||||||||||||||
Sbjct: 31371 acatcttattaaacattcca 31390
to top
>gb|AY136628.2| Petunia integrifolia subsp. inflata S2 self-incompatibility
             ribonuclease (S2-RNase) and S2-locus F-box protein (SLF2)
             genes, complete cds
          Length = 328473

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 415   agcatcaagctcaaccatagcctt 438
             ||||| ||||||||||||||||||
Sbjct: 67034 agcatgaagctcaaccatagcctt 67057



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 415   agcatcaagctcaaccatagcctt 438
             ||||| ||||||||||||||||||
Sbjct: 47113 agcatgaagctcaaccatagcctt 47090
to top
>ref|XM_595012.2| PREDICTED: Bos taurus similar to IGF-II mRNA-binding protein 1
           (LOC516853), mRNA
          Length = 1304

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 46  acaacttgaggggtggggtg 65
           ||||||||||||||||||||
Sbjct: 217 acaacttgaggggtggggtg 236
to top
>gb|BC016509.1| Homo sapiens secretory carrier membrane protein 4, mRNA (cDNA clone
            MGC:17276 IMAGE:4180160), complete cds
          Length = 2514

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 53   gaggggtggggtgggggttg 72
            ||||||||||||||||||||
Sbjct: 2413 gaggggtggggtgggggttg 2394
to top
>ref|XM_587285.2| PREDICTED: Bos taurus similar to SH2 domain containing 3A, transcript
            variant 1 (LOC510173), mRNA
          Length = 2359

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 49   acttgaggggtggggtgggg 68
            ||||||||||||||||||||
Sbjct: 2221 acttgaggggtggggtgggg 2202
to top
>ref|XM_882760.1| PREDICTED: Bos taurus similar to SH2 domain containing 3A, transcript
            variant 2 (LOC510173), mRNA
          Length = 2267

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 49   acttgaggggtggggtgggg 68
            ||||||||||||||||||||
Sbjct: 2129 acttgaggggtggggtgggg 2110
to top
>gb|AC118640.8| Mus musculus chromosome 15, clone RP24-112A20, complete sequence
          Length = 179510

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     ggggtggggtgggggttgtt 74
              ||||||||||||||||||||
Sbjct: 127753 ggggtggggtgggggttgtt 127734
to top
>gb|AC165965.3| Mus musculus BAC clone RP23-307L24 from chromosome 6, complete sequence
          Length = 209230

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     ggggtggggtgggggttgtt 74
              ||||||||||||||||||||
Sbjct: 170956 ggggtggggtgggggttgtt 170975
to top
>gb|AC163273.4| Mus musculus chromosome 5, clone RP24-396E18, complete sequence
          Length = 136964

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 148   acatcttattaaacattcca 167
             ||||||||||||||||||||
Sbjct: 40502 acatcttattaaacattcca 40521
to top
>gb|AC122882.4| Mus musculus BAC clone RP23-80M17 from chromosome 7, complete sequence
          Length = 260989

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     ggggtggggtgggggttgtt 74
              ||||||||||||||||||||
Sbjct: 163204 ggggtggggtgggggttgtt 163185
to top
>gb|AC133933.4| Mus musculus BAC clone RP24-333C16 from chromosome 18, complete sequence
          Length = 219699

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 52     tgaggggtggggtgggggtt 71
              ||||||||||||||||||||
Sbjct: 114229 tgaggggtggggtgggggtt 114248
to top
>emb|AJ270784.1|HHI270784 Hippoglossus hippoglossus microsatellite DNA, clone Hhi55
          Length = 424

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  gaggggtggggtgggggttg 72
           ||||||||||||||||||||
Sbjct: 182 gaggggtggggtgggggttg 201
to top
>gb|AC130721.3| Mus musculus BAC clone RP24-333B3 from chromosome 6, complete sequence
          Length = 149502

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     ggggtggggtgggggttgtt 74
              ||||||||||||||||||||
Sbjct: 108099 ggggtggggtgggggttgtt 108080
to top
>gb|AC119035.5| Homo sapiens 3 BAC RP11-445E17 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 170181

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    ttgaggggtggggtgggggt 70
             ||||||||||||||||||||
Sbjct: 27781 ttgaggggtggggtgggggt 27762
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>gb|AE014301.1| Homo sapiens chromosome 13q34 schizophrenia region contig 2 section 1
             of 3 of the complete sequence
          Length = 106598

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   cccactccaactcaacatct 153
             ||||||||||||||||||||
Sbjct: 97173 cccactccaactcaacatct 97154
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>gb|BC007958.2| Homo sapiens secretory carrier membrane protein 4, mRNA (cDNA clone
           IMAGE:4301779), partial cds
          Length = 765

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 53  gaggggtggggtgggggttg 72
           ||||||||||||||||||||
Sbjct: 662 gaggggtggggtgggggttg 643
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>gb|AC126784.11| Medicago truncatula clone mth2-36b12, complete sequence
          Length = 129102

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 463   atgcctcctctcaacatcca 482
             ||||||||||||||||||||
Sbjct: 64505 atgcctcctctcaacatcca 64524
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>gb|AC159626.2| Mus musculus BAC clone RP24-209A23 from chromosome 12, complete sequence
          Length = 157411

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 23     tgttcagaaaattattgtcaaaaa 46
              ||||||||||||||||||| ||||
Sbjct: 127534 tgttcagaaaattattgtctaaaa 127511
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>emb|AL731551.9| Human DNA sequence from clone RP11-337F21 on chromosome 10 Contains
             part of the CUBN gene for cubilin (intrinsic
             factor-cobalamin receptor), complete sequence
          Length = 103188

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    aggggtggggtgggggttgt 73
             ||||||||||||||||||||
Sbjct: 37429 aggggtggggtgggggttgt 37448
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>emb|AL355807.11| Human DNA sequence from clone RP11-487A20 on chromosome 13 Contains the
             5' end of the ITGBL1 gene for integrin, beta-like 1 (with
             EGF-like repeat domains), complete sequence
          Length = 149143

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   cccactccaactcaacatct 153
             ||||||||||||||||||||
Sbjct: 13544 cccactccaactcaacatct 13525
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>emb|AL031230.1|HS73M23 Human DNA sequence from clone RP1-73M23 on chromosome 6p22.2-22.3
             Contains the 5' part of the GPLD1 gene for
             glycosylphosphatidylinositol specific phospholipase D1,
             the SSADH gene for aldehyde dehydrogenase 5 family member
             A, the 3' part of the KIAA0319 gene and a CpG island,
             complete sequence
          Length = 126990

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    ctgctgttcagaaaattatt 38
             ||||||||||||||||||||
Sbjct: 64518 ctgctgttcagaaaattatt 64499
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>emb|AL022726.1|HS625H18 Human DNA sequence from clone RP4-625H18 on chromosome 6p22.2-23
             Contains the ID4 gene for dominant negative
             helix-loop-helix inhibitor of DNA binding 4 protein, a
             novel gene, the 5' end of two novel genes and four CpG
             islands, complete sequence
          Length = 185371

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    aaaacaacttgaggggtggg 62
             ||||||||||||||||||||
Sbjct: 15559 aaaacaacttgaggggtggg 15578
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>emb|CR942205.4| Human DNA sequence from clone RP11-948M1 on chromosome 6, complete
              sequence
          Length = 176819

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     ctgctgttcagaaaattatt 38
              ||||||||||||||||||||
Sbjct: 167771 ctgctgttcagaaaattatt 167790
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>ref|XM_787074.1| PREDICTED: Strongylocentrotus purpuratus similar to CG7364-PA
           (LOC587342), partial mRNA
          Length = 1014

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 223 caaggaacaagaagaaaatt 242
           ||||||||||||||||||||
Sbjct: 607 caaggaacaagaagaaaatt 588
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>emb|X87940.1|SADNAIF2 S.aurantiaca DNA for initiation factor 2
          Length = 5186

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 50  cttgaggggtggggtggggg 69
           ||||||||||||||||||||
Sbjct: 744 cttgaggggtggggtggggg 763
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>emb|AL591426.17| Mouse DNA sequence from clone RP23-345E8 on chromosome 11 Contains a
             novel gene, the Arht1 gene for ras homolog gene family
             member T1, the 5' end of the Rhbdl4 gene for rhomboid
             veinlet-like 4 (Drosophila), complete sequence
          Length = 153420

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    aggggtggggtgggggttgt 73
             ||||||||||||||||||||
Sbjct: 77185 aggggtggggtgggggttgt 77204
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>emb|CR388386.12| Zebrafish DNA sequence from clone DKEY-253N6 in linkage group 22,
             complete sequence
          Length = 143089

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    aaaattattgtcaaaaacaa 49
             ||||||||||||||||||||
Sbjct: 61722 aaaattattgtcaaaaacaa 61703
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>gb|AC068631.16| Homo sapiens 3 BAC RP11-134F2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 167137

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 135    ccactccaactcaacatctt 154
              ||||||||||||||||||||
Sbjct: 166676 ccactccaactcaacatctt 166657
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>dbj|AK091166.1| Homo sapiens cDNA FLJ33847 fis, clone CTONG2005399, weakly similar to
            ZINC FINGER PROTEIN 195
          Length = 2955

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 53   gaggggtggggtgggggttg 72
            ||||||||||||||||||||
Sbjct: 2875 gaggggtggggtgggggttg 2856
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>dbj|AK074967.1| Homo sapiens cDNA FLJ90486 fis, clone NT2RP3003354, highly similar to
            Secretory carrier membrane protein 4
          Length = 2500

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 53   gaggggtggggtgggggttg 72
            ||||||||||||||||||||
Sbjct: 2414 gaggggtggggtgggggttg 2395
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>gb|DP000062.1| Sus scrofa target 117 genomic scaffold
          Length = 605739

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     ggggtgggggttgttaaatg 79
              ||||||||||||||||||||
Sbjct: 287303 ggggtgggggttgttaaatg 287322
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>gb|AC117414.3| Homo sapiens 3 BAC RP11-48F14 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 143721

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 135  ccactccaactcaacatctt 154
            ||||||||||||||||||||
Sbjct: 1544 ccactccaactcaacatctt 1525
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>gb|AC121318.17| Mus musculus chromosome 1, clone RP24-377P1, complete sequence
          Length = 179884

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 424    ctcaaccatagccttcttga 443
              ||||||||||||||||||||
Sbjct: 167232 ctcaaccatagccttcttga 167213
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>gb|BC016685.1|BC016685 Homo sapiens, clone IMAGE:4214718, mRNA
          Length = 906

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 53  gaggggtggggtgggggttg 72
           ||||||||||||||||||||
Sbjct: 774 gaggggtggggtgggggttg 755
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>gb|AC113015.12| Mus musculus chromosome 1, clone RP23-180E19, complete sequence
          Length = 188389

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 424   ctcaaccatagccttcttga 443
             ||||||||||||||||||||
Sbjct: 29573 ctcaaccatagccttcttga 29554
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>gb|AC151535.2| Mus musculus BAC clone RP23-213M8 from chromosome 7, complete sequence
          Length = 216527

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     ggggtggggtgggggttgtt 74
              ||||||||||||||||||||
Sbjct: 178824 ggggtggggtgggggttgtt 178805
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>gb|AC154190.2| Mus musculus BAC clone RP24-465P16 from chromosome 16, complete
             sequence
          Length = 150894

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    ggggtggggtgggggttgtt 74
             ||||||||||||||||||||
Sbjct: 23593 ggggtggggtgggggttgtt 23612
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>emb|BX088698.22| Mouse DNA sequence from clone RP23-309D15 on chromosome X, complete
             sequence
          Length = 184201

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    aggggtggggtgggggttgt 73
             ||||||||||||||||||||
Sbjct: 44440 aggggtggggtgggggttgt 44459
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 60      ggggtgggggttgttaaatgtgga 83
               |||||||||||||||| |||||||
Sbjct: 7259819 ggggtgggggttgttagatgtgga 7259796
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>gb|AC087625.12| Homo sapiens chromosome 8, clone RP11-525O22, complete sequence
          Length = 166763

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 220   ctgcaaggaacaagaagaaaattt 243
             ||||||| ||||||||||||||||
Sbjct: 52739 ctgcaagaaacaagaagaaaattt 52716
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>gb|AC087273.5| Homo sapiens chromosome 8, clone RP11-156K13, complete sequence
          Length = 160835

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 220  ctgcaaggaacaagaagaaaattt 243
            ||||||| ||||||||||||||||
Sbjct: 9718 ctgcaagaaacaagaagaaaattt 9741
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>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0016A21
          Length = 144076

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 60     ggggtgggggttgttaaatgtgga 83
              |||||||||||||||| |||||||
Sbjct: 100303 ggggtgggggttgttagatgtgga 100280
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>emb|BX511200.2|RN52A6 Rattus norvegicus chromosome 1 BAC RP32-52A6, complete sequence
          Length = 150951

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    ggggtggggtgggggttgtt 74
             ||||||||||||||||||||
Sbjct: 19773 ggggtggggtgggggttgtt 19754
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>ref|XM_311551.2| Anopheles gambiae str. PEST ENSANGP00000010229 (ENSANGG00000007740),
            partial mRNA
          Length = 1257

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 436  cttcttgatcactggcttga 455
            ||||||||||||||||||||
Sbjct: 1155 cttcttgatcactggcttga 1136
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>gb|AC154783.2| Mus musculus BAC clone RP24-466C8 from 12, complete sequence
          Length = 167125

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 23     tgttcagaaaattattgtcaaaaa 46
              ||||||||||||||||||| ||||
Sbjct: 150168 tgttcagaaaattattgtctaaaa 150191
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>gb|BC062598.1| Homo sapiens secretory carrier membrane protein 4, mRNA (cDNA clone
            MGC:70890 IMAGE:5247983), complete cds
          Length = 2585

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 53   gaggggtggggtgggggttg 72
            ||||||||||||||||||||
Sbjct: 2412 gaggggtggggtgggggttg 2393
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>gb|AC154300.2| Mus musculus BAC clone RP23-390F4 from 12, complete sequence
          Length = 187014

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 212    tctcaaaactgcaaggaaca 231
              ||||||||||||||||||||
Sbjct: 172201 tctcaaaactgcaaggaaca 172182
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>emb|BX649585.4| Zebrafish DNA sequence from clone CH211-123B7 in linkage group 22,
             complete sequence
          Length = 153749

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    aaaattattgtcaaaaacaa 49
             ||||||||||||||||||||
Sbjct: 85117 aaaattattgtcaaaaacaa 85136
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>dbj|AP006303.1| Homo sapiens genomic DNA, chromosome 8 clone:RP11-285B2, complete
             sequence
          Length = 167054

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 220   ctgcaaggaacaagaagaaaattt 243
             ||||||| ||||||||||||||||
Sbjct: 97123 ctgcaagaaacaagaagaaaattt 97100
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>emb|CT030235.12| Mouse DNA sequence from clone RP23-240F19 on chromosome 16, complete
             sequence
          Length = 236028

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    ggggtggggtgggggttgtt 74
             ||||||||||||||||||||
Sbjct: 22835 ggggtggggtgggggttgtt 22816
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>emb|CT010486.13| Mouse DNA sequence from clone RP23-129J22 on chromosome 13, complete
              sequence
          Length = 199574

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     ggggtggggtgggggttgtt 74
              ||||||||||||||||||||
Sbjct: 150340 ggggtggggtgggggttgtt 150321
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>gb|AC122201.4| Mus musculus BAC clone RP23-64I9 from 6, complete sequence
          Length = 239994

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     ggggtggggtgggggttgtt 74
              ||||||||||||||||||||
Sbjct: 186699 ggggtggggtgggggttgtt 186680
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>gb|AC170807.2| Mus musculus BAC clone RP23-374I2 from chromosome 17, complete sequence
          Length = 208318

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    ggggtggggtgggggttgtt 74
             ||||||||||||||||||||
Sbjct: 40549 ggggtggggtgggggttgtt 40568
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>gb|AC154126.2| Mus musculus BAC clone RP23-471O11 from chromosome 7, complete sequence
          Length = 198860

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    ggggtggggtgggggttgtt 74
             ||||||||||||||||||||
Sbjct: 52224 ggggtggggtgggggttgtt 52205
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>gb|AC170884.3| Mus musculus BAC clone RP24-111L17 from chromosome 17, complete sequence
          Length = 180189

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     ggggtggggtgggggttgtt 74
              ||||||||||||||||||||
Sbjct: 171084 ggggtggggtgggggttgtt 171103
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>dbj|AB020866.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-oncogene of hepatocellular
             colorectal and non-small cell lung cancer , segment 9/11
          Length = 100000

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 220   ctgcaaggaacaagaagaaaattt 243
             ||||||| ||||||||||||||||
Sbjct: 75474 ctgcaagaaacaagaagaaaattt 75451


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,632,214
Number of Sequences: 3902068
Number of extensions: 4632214
Number of successful extensions: 129650
Number of sequences better than 10.0: 103
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 129334
Number of HSP's gapped (non-prelim): 316
length of query: 496
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 474
effective length of database: 17,147,199,772
effective search space: 8127772691928
effective search space used: 8127772691928
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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