ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart56e01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X80266.1|HVGTIPP H.vulgare mRNA for gamma-TIP-like protein 379 e-102
2gb|AC020922.9| Homo sapiens chromosome 19 clone CTD-2105E13, com... 46 0.049
3gb|AY207429.1| Homo sapiens interleukin 11 (IL11) gene, complete... 46 0.049
4gb|M81890.1|HUMIL11A Human interleukin 11 (IL11) gene, complete ... 46 0.049
5ref|XM_851400.1| PREDICTED: Canis familiaris similar to actinin,... 44 0.19
6ref|XM_536333.2| PREDICTED: Canis familiaris similar to actinin,... 44 0.19
7ref|XM_851314.1| PREDICTED: Canis familiaris similar to actinin,... 44 0.19
8ref|XM_851274.1| PREDICTED: Canis familiaris similar to actinin,... 44 0.19
9ref|XM_851189.1| PREDICTED: Canis familiaris similar to actinin,... 44 0.19
10ref|XM_851152.1| PREDICTED: Canis familiaris similar to actinin,... 44 0.19
11ref|XM_851023.1| PREDICTED: Canis familiaris similar to actinin,... 44 0.19
12gb|U86762.1|TAU86762 Triticum aestivum gamma-type tonoplast intr... 44 0.19
13gb|AC154709.2| Mus musculus BAC clone RP24-357I4 from chromosome... 42 0.77
14gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 0.77
15emb|CT025679.5| Mouse DNA sequence from clone RP24-296K22 on chr... 42 0.77
16gb|AC123532.4| Mus musculus chromosome 14 clone RP23-84B6, compl... 42 0.77
17gb|AC098877.3| Mus musculus BAC clone RP23-2C24 from 14, complet... 42 0.77
18gb|AC104099.5| Mus musculus BAC clone RP24-372J8 from 3, complet... 42 0.77
19gb|BC012214.1| Mus musculus Rab geranylgeranyl transferase, a su... 42 0.77
20gb|AY258323.1| Rubella virus strain BRD-II, complete genome 42 0.77
21ref|NM_019519.1| Mus musculus Rab geranylgeranyl transferase, a ... 42 0.77
22emb|AL390091.1|NCB12F1 Neurospora crassa DNA linkage group II BA... 42 0.77
23emb|BX470185.18| Zebrafish DNA sequence from clone CH211-222D3 i... 42 0.77
24dbj|AK146917.1| Mus musculus 17 days embryo kidney cDNA, RIKEN f... 42 0.77
25dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.77
26gb|AC135495.2| Oryza sativa (japonica cultivar-group) chromosome... 42 0.77
27ref|NM_214226.1| Sus scrofa inositol(1,3,4,5)tetrakisphosphate r... 42 0.77
28gb|AF127662.1|AF127662 Mus musculus strain C57BL/6J-gm/gm RAB ge... 42 0.77
29gb|AF127661.1|AF127661 Mus musculus strain C57BL/6J-gm/gm RAB ge... 42 0.77
30gb|AF127660.1|AF127660 Mus musculus strain C57BL/6J RAB geranylg... 42 0.77
31gb|AF127659.1|AF127659 Mus musculus strain C57BL/6J-gm/gm RAB ge... 42 0.77
32gb|AF127658.1|AF127658 Mus musculus strain C57BL/6J RAB geranylg... 42 0.77
33gb|AF127657.1|AF127657 Mus musculus strain C57BL/6J-gm/gm RAB ge... 42 0.77
34gb|AF127656.1|AF127656 Mus musculus strain C57BL/6J RAB geranylg... 42 0.77
35gb|AF127655.1|AF127655 Mus musculus strain C57BL/6J-gm/gm RAB ge... 42 0.77
36gb|AF127654.1|AF127654 Mus musculus strain C57BL/6J RAB geranylg... 42 0.77
37emb|AL845372.6| Zebrafish DNA sequence from clone DKEYP-113C1 in... 42 0.77
38emb|CR381567.9| Zebrafish DNA sequence from clone DKEY-115O4 in ... 42 0.77
39gb|AC159324.2| Mus musculus BAC clone RP23-9D1 from chromosome 1... 42 0.77
40emb|CR974568.14| Mouse DNA sequence from clone RP23-39N20 on chr... 42 0.77
41emb|CR388420.19| Zebrafish DNA sequence from clone DKEY-37H18 in... 42 0.77
42gb|U88368.1|SSU88368 Sus scrofa inositol(1,3,4,5)tetrakisphospha... 42 0.77
43gb|L07320.1|HS5E1A Murine cytomegalovirus e1 protein gene, compl... 42 0.77
44gb|AC164878.2| Mus musculus BAC clone RP23-364G24 from chromosom... 40 3.0
45gb|AC162034.6| Mus musculus chromosome 7, clone RP23-285B12, com... 40 3.0
46gb|DQ215783.1| Taeniopygia guttata clone 0058P0012B09 proteasome... 40 3.0
47gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, comple... 40 3.0
48emb|CR847515.10| Zebrafish DNA sequence from clone DKEYP-60A7 in... 40 3.0
49gb|AC012596.4| Homo sapiens BAC clone CTD-2523K17 from 7, comple... 40 3.0
50gb|AY225468.1| Mus musculus interleukin 11 gene, promoter region... 40 3.0
51emb|AL161740.16| Human DNA sequence from clone RP6-239D12 on chr... 40 3.0
52gb|AF486513.1| Hordeum vulgare cultivar Yon M Kei GBSSI gene, pr... 40 3.0
53gb|AF486512.1| Hordeum vulgare cultivar CDC Alamo GBSSI gene, pr... 40 3.0
54gb|AF486508.1| Hordeum vulgare cultivar Oderbrucker GBSSI gene, ... 40 3.0
55emb|BX897736.7| Zebrafish DNA sequence from clone CH211-181B15 i... 40 3.0
56gb|AC023310.4| Homo sapiens chromosome 15, clone RP11-336L20, co... 40 3.0
57tpg|BK001890.1| TPA: TPA_inf: Drosophila melanogaster HDC08154 (... 40 3.0
58dbj|AB118808.1| Hordeum vulgare subsp. spontaneum GBSSI gene for... 40 3.0
59dbj|AB089162.1| Hordeum vulgare subsp. vulgare GBSSI gene for gr... 40 3.0
60dbj|AB088761.1| Hordeum vulgare subsp. vulgare GBSSI gene for gr... 40 3.0
61gb|AC100757.2| Homo sapiens chromosome 15, clone RP11-566K19, co... 40 3.0
62gb|AC107487.1| Drosophila melanogaster 3L BAC RP98-10D20 (Roswel... 40 3.0
63emb|BX548249.13| Zebrafish DNA sequence from clone CH211-93A2 in... 40 3.0
64emb|BX119977.10| Zebrafish DNA sequence from clone CH211-198A3 i... 40 3.0
65gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplas... 40 3.0
66gb|AC136687.6| Homo sapiens chromosome 15, clone RP11-439M15, co... 40 3.0
67gb|AC134393.6| Homo sapiens chromosome 15, clone CTC-803A3, comp... 40 3.0
68gb|AC131280.9| Homo sapiens chromosome 15, clone RP11-467L19, co... 40 3.0
69dbj|AB154356.1| Hordeum vulgare subsp. spontaneum GBSSI gene for... 40 3.0
70dbj|AB118809.1| Hordeum vulgare subsp. spontaneum GBSSI gene for... 40 3.0
71emb|X07932.1|HVWAXYR Barley mRNA pcwx27 for waxy locus 40 3.0
72emb|X07931.1|HVWAXYG Barley DNA for waxy locus encoding starch s... 40 3.0
73emb|AL929340.4| Zebrafish DNA sequence from clone CH211-248N16 i... 40 3.0
74gb|AE003476.3| Drosophila melanogaster chromosome 3L, section 10... 40 3.0
75gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 3.0
76gb|U68299.1|MCU68299 Mouse cytomegalovirus 1 complete genomic se... 40 3.0
77emb|CR388150.14| Zebrafish DNA sequence from clone DKEY-115A2 in... 40 3.0
78dbj|AB054056.1| Hordeum vulgare waxy gene, partial sequence, cul... 40 3.0
79dbj|AB054055.2| Hordeum vulgare waxy gene, partial sequence, cul... 40 3.0
80emb|AL772162.4| Mouse DNA sequence from clone RP23-175J8 on chro... 40 3.0 
>emb|X80266.1|HVGTIPP H.vulgare mRNA for gamma-TIP-like protein
          Length = 1020

 Score =  379 bits (191), Expect = e-102
 Identities = 197/199 (98%)
 Strand = Plus / Minus

                                                                        
Query: 38   aattcacaggttttacacaagcaaattgacggggtcgatcgtcacaggtttcacagcacc 97
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1019 aattcacaggttttacacaagcaaattgacagggtcgatcgtcacaggtttcacagcacc 960

                                                                        
Query: 98   acaaactgatggaccgatcgaccctgggaatgggatggattcattcattcaaagcaaact 157
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 959  acaaactgatggaccgatcgaccctgggaatgggatggattcattcattcaaagcaaact 900

                                                                        
Query: 158  taaacgactcatgactggaagcaaggggaaacgcgatcgaccacacggacggacgggcgg 217
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 899  taaacgactcatgactggaagcaaggggagacgcgatcgaccacacggacggacgggcgg 840

                               
Query: 218  gcggggggcaggcggcggt 236
            |||||||||||||||||||
Sbjct: 839  gcggggggcaggcggcggt 821
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>gb|AC020922.9| Homo sapiens chromosome 19 clone CTD-2105E13, complete sequence
          Length = 134793

 Score = 46.1 bits (23), Expect = 0.049
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 211   cgggcgggcggggggcaggcggc 233
             |||||||||||||||||||||||
Sbjct: 78789 cgggcgggcggggggcaggcggc 78811
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>gb|AY207429.1| Homo sapiens interleukin 11 (IL11) gene, complete cds
          Length = 9803

 Score = 46.1 bits (23), Expect = 0.049
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 211  cgggcgggcggggggcaggcggc 233
            |||||||||||||||||||||||
Sbjct: 1449 cgggcgggcggggggcaggcggc 1427
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>gb|M81890.1|HUMIL11A Human interleukin 11 (IL11) gene, complete mRNA
          Length = 6870

 Score = 46.1 bits (23), Expect = 0.049
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 211 cgggcgggcggggggcaggcggc 233
           |||||||||||||||||||||||
Sbjct: 688 cgggcgggcggggggcaggcggc 666
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>ref|XM_851400.1| PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript
           variant 11 (LOC479191), mRNA
          Length = 4681

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 202 acggacggacgggcgggcggggggcaggcggcgg 235
           |||||||||||||| ||||||| || ||||||||
Sbjct: 124 acggacggacgggccggcggggcgcgggcggcgg 91
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>ref|XM_536333.2| PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript
           variant 1 (LOC479191), mRNA
          Length = 4681

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 202 acggacggacgggcgggcggggggcaggcggcgg 235
           |||||||||||||| ||||||| || ||||||||
Sbjct: 124 acggacggacgggccggcggggcgcgggcggcgg 91
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>ref|XM_851314.1| PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript
           variant 10 (LOC479191), mRNA
          Length = 4663

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 202 acggacggacgggcgggcggggggcaggcggcgg 235
           |||||||||||||| ||||||| || ||||||||
Sbjct: 124 acggacggacgggccggcggggcgcgggcggcgg 91
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>ref|XM_851274.1| PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript
           variant 9 (LOC479191), mRNA
          Length = 4438

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 202 acggacggacgggcgggcggggggcaggcggcgg 235
           |||||||||||||| ||||||| || ||||||||
Sbjct: 124 acggacggacgggccggcggggcgcgggcggcgg 91
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>ref|XM_851189.1| PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript
           variant 7 (LOC479191), mRNA
          Length = 4777

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 202 acggacggacgggcgggcggggggcaggcggcgg 235
           |||||||||||||| ||||||| || ||||||||
Sbjct: 124 acggacggacgggccggcggggcgcgggcggcgg 91
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>ref|XM_851152.1| PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript
           variant 6 (LOC479191), mRNA
          Length = 4696

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 202 acggacggacgggcgggcggggggcaggcggcgg 235
           |||||||||||||| ||||||| || ||||||||
Sbjct: 124 acggacggacgggccggcggggcgcgggcggcgg 91
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>ref|XM_851023.1| PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript
           variant 3 (LOC479191), mRNA
          Length = 4681

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 202 acggacggacgggcgggcggggggcaggcggcgg 235
           |||||||||||||| ||||||| || ||||||||
Sbjct: 124 acggacggacgggccggcggggcgcgggcggcgg 91
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>gb|U86762.1|TAU86762 Triticum aestivum gamma-type tonoplast intrinsic protein mRNA,
           complete cds
          Length = 1133

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 149 aagcaaacttaaacgactcatg 170
           ||||||||||||||||||||||
Sbjct: 977 aagcaaacttaaacgactcatg 956



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 8    caactgaacttgaaattactcggg 31
            ||||| ||||||||||||||||||
Sbjct: 1097 caactcaacttgaaattactcggg 1074
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>gb|AC154709.2| Mus musculus BAC clone RP24-357I4 from chromosome 12, complete sequence
          Length = 136354

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 202   acggacggacgggcgggcggg 222
             |||||||||||||||||||||
Sbjct: 94084 acggacggacgggcgggcggg 94104
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 202     acggacggacgggcgggcggg 222
               |||||||||||||||||||||
Sbjct: 8319519 acggacggacgggcgggcggg 8319499
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>emb|CT025679.5| Mouse DNA sequence from clone RP24-296K22 on chromosome 14, complete
              sequence
          Length = 160805

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 202    acggacggacgggcgggcggg 222
              |||||||||||||||||||||
Sbjct: 155955 acggacggacgggcgggcggg 155935
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>gb|AC123532.4| Mus musculus chromosome 14 clone RP23-84B6, complete sequence
          Length = 166421

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 202  acggacggacgggcgggcggg 222
            |||||||||||||||||||||
Sbjct: 7846 acggacggacgggcgggcggg 7826
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>gb|AC098877.3| Mus musculus BAC clone RP23-2C24 from 14, complete sequence
          Length = 240151

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 202   acggacggacgggcgggcggg 222
             |||||||||||||||||||||
Sbjct: 37973 acggacggacgggcgggcggg 37953
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>gb|AC104099.5| Mus musculus BAC clone RP24-372J8 from 3, complete sequence
          Length = 148259

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 202   acggacggacgggcgggcggg 222
             |||||||||||||||||||||
Sbjct: 37509 acggacggacgggcgggcggg 37489



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 199   cacacggacggacgggcgggcggg 222
             ||||||||||||||| ||||||||
Sbjct: 37516 cacacggacggacggacgggcggg 37493
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>gb|BC012214.1| Mus musculus Rab geranylgeranyl transferase, a subunit, mRNA (cDNA
           clone MGC:19255 IMAGE:3967218), complete cds
          Length = 2176

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 202 acggacggacgggcgggcggg 222
           |||||||||||||||||||||
Sbjct: 23  acggacggacgggcgggcggg 43
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>gb|AY258323.1| Rubella virus strain BRD-II, complete genome
          Length = 9778

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 211  cgggcgggcggggggcaggcggcgg 235
            ||||||||| |||||||||||||||
Sbjct: 2327 cgggcgggctgggggcaggcggcgg 2303
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>ref|NM_019519.1| Mus musculus Rab geranylgeranyl transferase, a subunit (Rabggta),
           mRNA
          Length = 2547

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 202 acggacggacgggcgggcggg 222
           |||||||||||||||||||||
Sbjct: 18  acggacggacgggcgggcggg 38
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>emb|AL390091.1|NCB12F1 Neurospora crassa DNA linkage group II BAC clone B12F1
          Length = 68478

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 202   acggacggacgggcgggcggg 222
             |||||||||||||||||||||
Sbjct: 42894 acggacggacgggcgggcggg 42914



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 199   cacacggacggacgggcgggcggg 222
             ||||||||||||||| ||||||||
Sbjct: 42887 cacacggacggacggacgggcggg 42910
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>emb|BX470185.18| Zebrafish DNA sequence from clone CH211-222D3 in linkage group 3,
             complete sequence
          Length = 198900

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 202   acggacggacgggcgggcggg 222
             |||||||||||||||||||||
Sbjct: 27616 acggacggacgggcgggcggg 27596
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>dbj|AK146917.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched
           library, clone:I920074L06 product:Rab geranylgeranyl
           transferase, a subunit, full insert sequence
          Length = 2422

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 202 acggacggacgggcgggcggg 222
           |||||||||||||||||||||
Sbjct: 41  acggacggacgggcgggcggg 61
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 202     acggacggacgggcgggcggg 222
               |||||||||||||||||||||
Sbjct: 8317354 acggacggacgggcgggcggg 8317334
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>gb|AC135495.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1664B11,
             complete sequence
          Length = 126040

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 202   acggacggacgggcgggcggg 222
             |||||||||||||||||||||
Sbjct: 56775 acggacggacgggcgggcggg 56755
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>ref|NM_214226.1| Sus scrofa inositol(1,3,4,5)tetrakisphosphate receptor (CENTA1),
           mRNA
          Length = 1544

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 203 cggacggacgggcgggcggggggca 227
           |||||||||||||||||||| ||||
Sbjct: 56  cggacggacgggcgggcgggcggca 80
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>gb|AF127662.1|AF127662 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase
           alpha subunit (Rabggta) mRNA, complete cds,
           alternatively spliced
          Length = 2466

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 202 acggacggacgggcgggcggg 222
           |||||||||||||||||||||
Sbjct: 18  acggacggacgggcgggcggg 38
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>gb|AF127661.1|AF127661 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase
           alpha subunit (Rabggta) pseudogene, complete sequence
          Length = 2435

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 202 acggacggacgggcgggcggg 222
           |||||||||||||||||||||
Sbjct: 18  acggacggacgggcgggcggg 38
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>gb|AF127660.1|AF127660 Mus musculus strain C57BL/6J RAB geranylgeranyl transferase alpha
           subunit (Rabggta) mRNA, complete cds, alternatively
           spliced
          Length = 2492

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 202 acggacggacgggcgggcggg 222
           |||||||||||||||||||||
Sbjct: 18  acggacggacgggcgggcggg 38
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>gb|AF127659.1|AF127659 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase
           alpha subunit (Rabggta) mRNA, complete cds,
           alternatively spliced
          Length = 2547

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 202 acggacggacgggcgggcggg 222
           |||||||||||||||||||||
Sbjct: 18  acggacggacgggcgggcggg 38
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>gb|AF127658.1|AF127658 Mus musculus strain C57BL/6J RAB geranylgeranyl transferase alpha
           subunit (Rabggta) mRNA, complete cds, alternatively
           spliced
          Length = 2547

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 202 acggacggacgggcgggcggg 222
           |||||||||||||||||||||
Sbjct: 18  acggacggacgggcgggcggg 38
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>gb|AF127657.1|AF127657 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase
           alpha subunit (Rabggta) pseudogene, complete sequence
          Length = 2338

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 202 acggacggacgggcgggcggg 222
           |||||||||||||||||||||
Sbjct: 18  acggacggacgggcgggcggg 38
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>gb|AF127656.1|AF127656 Mus musculus strain C57BL/6J RAB geranylgeranyl transferase alpha
           subunit (Rabggta) mRNA, complete cds, alternatively
           spliced
          Length = 2395

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 202 acggacggacgggcgggcggg 222
           |||||||||||||||||||||
Sbjct: 18  acggacggacgggcgggcggg 38
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>gb|AF127655.1|AF127655 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase
           alpha subunit (Rabggta) gene, complete cds,
           alternatively spliced
          Length = 2685

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 202 acggacggacgggcgggcggg 222
           |||||||||||||||||||||
Sbjct: 18  acggacggacgggcgggcggg 38
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>gb|AF127654.1|AF127654 Mus musculus strain C57BL/6J RAB geranylgeranyl transferase alpha
           subunit (Rabggta) gene, complete cds, alternatively
           spliced
          Length = 2685

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 202 acggacggacgggcgggcggg 222
           |||||||||||||||||||||
Sbjct: 18  acggacggacgggcgggcggg 38
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>emb|AL845372.6| Zebrafish DNA sequence from clone DKEYP-113C1 in linkage group 20,
             complete sequence
          Length = 80017

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 202   acggacggacgggcgggcggg 222
             |||||||||||||||||||||
Sbjct: 44968 acggacggacgggcgggcggg 44988
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>emb|CR381567.9| Zebrafish DNA sequence from clone DKEY-115O4 in linkage group 23,
             complete sequence
          Length = 142417

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 202   acggacggacgggcgggcggg 222
             |||||||||||||||||||||
Sbjct: 45131 acggacggacgggcgggcggg 45151
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>gb|AC159324.2| Mus musculus BAC clone RP23-9D1 from chromosome 12, complete sequence
          Length = 207280

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 202   acggacggacgggcgggcggg 222
             |||||||||||||||||||||
Sbjct: 13760 acggacggacgggcgggcggg 13780
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>emb|CR974568.14| Mouse DNA sequence from clone RP23-39N20 on chromosome 12, complete
              sequence
          Length = 251037

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 202    acggacggacgggcgggcggg 222
              |||||||||||||||||||||
Sbjct: 108741 acggacggacgggcgggcggg 108721
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>emb|CR388420.19| Zebrafish DNA sequence from clone DKEY-37H18 in linkage group 13,
             complete sequence
          Length = 121689

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 202   acggacggacgggcgggcggg 222
             |||||||||||||||||||||
Sbjct: 73151 acggacggacgggcgggcggg 73131
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>gb|U88368.1|SSU88368 Sus scrofa inositol(1,3,4,5)tetrakisphosphate receptor mRNA,
           complete cds
          Length = 1544

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 203 cggacggacgggcgggcggggggca 227
           |||||||||||||||||||| ||||
Sbjct: 56  cggacggacgggcgggcgggcggca 80
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>gb|L07320.1|HS5E1A Murine cytomegalovirus e1 protein gene, complete cds
          Length = 4536

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 202 acggacggacgggcgggcggg 222
           |||||||||||||||||||||
Sbjct: 745 acggacggacgggcgggcggg 765
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>gb|AC164878.2| Mus musculus BAC clone RP23-364G24 from chromosome 13, complete
             sequence
          Length = 181893

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 202   acggacggacgggcgggcgg 221
             ||||||||||||||||||||
Sbjct: 94623 acggacggacgggcgggcgg 94642
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>gb|AC162034.6| Mus musculus chromosome 7, clone RP23-285B12, complete sequence
          Length = 197907

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 211    cgggcgggcggggggcaggc 230
              ||||||||||||||||||||
Sbjct: 122681 cgggcgggcggggggcaggc 122700
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>gb|DQ215783.1| Taeniopygia guttata clone 0058P0012B09 proteasome alpha 1 subunit
           variant 1-like mRNA, complete sequence
          Length = 1190

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 211 cgggcgggcggggggcaggcggcg 234
           ||||||||||| ||||||||||||
Sbjct: 38  cgggcgggcggcgggcaggcggcg 15
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>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence
          Length = 124050

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 202   acggacggacgggcgggcgg 221
             ||||||||||||||||||||
Sbjct: 72221 acggacggacgggcgggcgg 72202
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>emb|CR847515.10| Zebrafish DNA sequence from clone DKEYP-60A7 in linkage group 9, complete
              sequence
          Length = 153947

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    attcattcattcaaagcaaa 155
              ||||||||||||||||||||
Sbjct: 143356 attcattcattcaaagcaaa 143337
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>gb|AC012596.4| Homo sapiens BAC clone CTD-2523K17 from 7, complete sequence
          Length = 154859

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   gatggattcattcattcaaa 150
             ||||||||||||||||||||
Sbjct: 68036 gatggattcattcattcaaa 68017
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>gb|AY225468.1| Mus musculus interleukin 11 gene, promoter region and partial 5'UTR
          Length = 3811

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 211  cgggcgggcggggggcaggc 230
            ||||||||||||||||||||
Sbjct: 3619 cgggcgggcggggggcaggc 3600
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>emb|AL161740.16| Human DNA sequence from clone RP6-239D12 on chromosome 1p32.1-33
             Contains 3' end of the DAB1 gene for disabled homolog 1
             (Drosophila), a novel gene and the 5' end of a novel gene,
             complete sequence
          Length = 60856

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   gatggattcattcattcaaa 150
             ||||||||||||||||||||
Sbjct: 53885 gatggattcattcattcaaa 53904
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>gb|AF486513.1| Hordeum vulgare cultivar Yon M Kei GBSSI gene, promoter and 5'
           untranslated region
          Length = 1201

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 202 acggacggacgggcgggcgg 221
           ||||||||||||||||||||
Sbjct: 883 acggacggacgggcgggcgg 864
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>gb|AF486512.1| Hordeum vulgare cultivar CDC Alamo GBSSI gene, promoter and 5'
           untranslated region
          Length = 1197

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 202 acggacggacgggcgggcgg 221
           ||||||||||||||||||||
Sbjct: 884 acggacggacgggcgggcgg 865
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>gb|AF486508.1| Hordeum vulgare cultivar Oderbrucker GBSSI gene, promoter and 5'
           untranslated region
          Length = 1195

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 202 acggacggacgggcgggcgg 221
           ||||||||||||||||||||
Sbjct: 882 acggacggacgggcgggcgg 863
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>emb|BX897736.7| Zebrafish DNA sequence from clone CH211-181B15 in linkage group 17,
             complete sequence
          Length = 141987

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   gggatggattcattcattca 148
             ||||||||||||||||||||
Sbjct: 10001 gggatggattcattcattca 10020
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>gb|AC023310.4| Homo sapiens chromosome 15, clone RP11-336L20, complete sequence
          Length = 177355

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 126   aatgggatggattcattcattcaa 149
             |||||||| |||||||||||||||
Sbjct: 47407 aatgggattgattcattcattcaa 47384
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>tpg|BK001890.1| TPA: TPA_inf: Drosophila melanogaster HDC08154 (HDC08154) gene,
            complete cds
          Length = 1399

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 202  acggacggacgggcgggcgg 221
            ||||||||||||||||||||
Sbjct: 1381 acggacggacgggcgggcgg 1362
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>dbj|AB118808.1| Hordeum vulgare subsp. spontaneum GBSSI gene for granule bound
           starch synthase I, complete cds, strain:OUH643
          Length = 5119

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 202 acggacggacgggcgggcgg 221
           ||||||||||||||||||||
Sbjct: 797 acggacggacgggcgggcgg 778
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>dbj|AB089162.1| Hordeum vulgare subsp. vulgare GBSSI gene for granule bound starch
           synthase I
          Length = 5190

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 202 acggacggacgggcgggcgg 221
           ||||||||||||||||||||
Sbjct: 822 acggacggacgggcgggcgg 803
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>dbj|AB088761.1| Hordeum vulgare subsp. vulgare GBSSI gene for granule bound starch
           synthase I, complete cds
          Length = 5190

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 202 acggacggacgggcgggcgg 221
           ||||||||||||||||||||
Sbjct: 822 acggacggacgggcgggcgg 803
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>gb|AC100757.2| Homo sapiens chromosome 15, clone RP11-566K19, complete sequence
          Length = 171987

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 126   aatgggatggattcattcattcaa 149
             |||||||| |||||||||||||||
Sbjct: 31404 aatgggattgattcattcattcaa 31381
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>gb|AC107487.1| Drosophila melanogaster 3L BAC RP98-10D20 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 170900

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 202   acggacggacgggcgggcgg 221
             ||||||||||||||||||||
Sbjct: 32025 acggacggacgggcgggcgg 32006
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>emb|BX548249.13| Zebrafish DNA sequence from clone CH211-93A2 in linkage group 21,
             complete sequence
          Length = 153142

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 202   acggacggacgggcgggcgg 221
             ||||||||||||||||||||
Sbjct: 66723 acggacggacgggcgggcgg 66704
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>emb|BX119977.10| Zebrafish DNA sequence from clone CH211-198A3 in linkage group 7,
             complete sequence
          Length = 182186

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 202   acggacggacgggcgggcgg 221
             ||||||||||||||||||||
Sbjct: 16609 acggacggacgggcgggcgg 16590
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>gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplast, complete genome
          Length = 164921

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     aactgaacttgaaattactc 28
             ||||||||||||||||||||
Sbjct: 98129 aactgaacttgaaattactc 98148
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>gb|AC136687.6| Homo sapiens chromosome 15, clone RP11-439M15, complete sequence
          Length = 180708

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 126    aatgggatggattcattcattcaa 149
              |||||||| |||||||||||||||
Sbjct: 146597 aatgggattgattcattcattcaa 146620
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>gb|AC134393.6| Homo sapiens chromosome 15, clone CTC-803A3, complete sequence
          Length = 132353

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 126   aatgggatggattcattcattcaa 149
             |||||||| |||||||||||||||
Sbjct: 74998 aatgggattgattcattcattcaa 74975
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>gb|AC131280.9| Homo sapiens chromosome 15, clone RP11-467L19, complete sequence
          Length = 194754

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 126    aatgggatggattcattcattcaa 149
              |||||||| |||||||||||||||
Sbjct: 116188 aatgggattgattcattcattcaa 116211
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>dbj|AB154356.1| Hordeum vulgare subsp. spontaneum GBSSI gene for granule bound
           starch synthase I, complete cds
          Length = 4535

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 202 acggacggacgggcgggcgg 221
           ||||||||||||||||||||
Sbjct: 400 acggacggacgggcgggcgg 381
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>dbj|AB118809.1| Hordeum vulgare subsp. spontaneum GBSSI gene for granule bound
           starch synthase I, complete cds, strain:OUH602
          Length = 5190

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 202 acggacggacgggcgggcgg 221
           ||||||||||||||||||||
Sbjct: 822 acggacggacgggcgggcgg 803
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>emb|X07932.1|HVWAXYR Barley mRNA pcwx27 for waxy locus
          Length = 2311

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 202 acggacggacgggcgggcgg 221
           ||||||||||||||||||||
Sbjct: 133 acggacggacgggcgggcgg 114
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>emb|X07931.1|HVWAXYG Barley DNA for waxy locus encoding starch synthase (EC 2.4.1.11)
          Length = 5153

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 202 acggacggacgggcgggcgg 221
           ||||||||||||||||||||
Sbjct: 938 acggacggacgggcgggcgg 919
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>emb|AL929340.4| Zebrafish DNA sequence from clone CH211-248N16 in linkage group 20,
             complete sequence
          Length = 163231

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 202   acggacggacgggcgggcgg 221
             ||||||||||||||||||||
Sbjct: 60247 acggacggacgggcgggcgg 60266
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>gb|AE003476.3| Drosophila melanogaster chromosome 3L, section 10 of 83 of the complete
             sequence
          Length = 304419

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 202   acggacggacgggcgggcgg 221
             ||||||||||||||||||||
Sbjct: 80644 acggacggacgggcgggcgg 80625
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 213     ggcgggcggggggcaggcggcggt 236
               ||||||||||||||| ||||||||
Sbjct: 2074504 ggcgggcggggggcatgcggcggt 2074481
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>gb|U68299.1|MCU68299 Mouse cytomegalovirus 1 complete genomic sequence
          Length = 230278

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 202    acggacggacgggcgggcgg 221
              ||||||||||||||||||||
Sbjct: 161987 acggacggacgggcgggcgg 162006
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>emb|CR388150.14| Zebrafish DNA sequence from clone DKEY-115A2 in linkage group 3, complete
              sequence
          Length = 170964

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 202    acggacggacgggcgggcgg 221
              ||||||||||||||||||||
Sbjct: 119772 acggacggacgggcgggcgg 119791
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>dbj|AB054056.1| Hordeum vulgare waxy gene, partial sequence, cultivar:Shonupana
          Length = 802

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 202 acggacggacgggcgggcgg 221
           ||||||||||||||||||||
Sbjct: 384 acggacggacgggcgggcgg 365
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>dbj|AB054055.2| Hordeum vulgare waxy gene, partial sequence, cultivar:Senbon hadaka
          Length = 1011

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 202 acggacggacgggcgggcgg 221
           ||||||||||||||||||||
Sbjct: 399 acggacggacgggcgggcgg 380
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>emb|AL772162.4| Mouse DNA sequence from clone RP23-175J8 on chromosome 2, complete
             sequence
          Length = 100090

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   attcattcattcaaagcaaa 155
             ||||||||||||||||||||
Sbjct: 53765 attcattcattcaaagcaaa 53784


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,310,463
Number of Sequences: 3902068
Number of extensions: 2310463
Number of successful extensions: 52613
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52440
Number of HSP's gapped (non-prelim): 173
length of query: 237
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 215
effective length of database: 17,147,199,772
effective search space: 3686647950980
effective search space used: 3686647950980
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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