>FUSIP_MOUSE (Q9R0U0) FUS-interacting serine-arginine-rich protein 1|
           (TLS-associated protein with Ser-Arg repeats)
           (TLS-associated protein with SR repeats) (TASR)
           (TLS-associated serine-arginine protein) (TLS-associated
           SR protein) (Neural-specific SR pro
          Length = 262

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
 Frame = +2

Query: 26  YQYRREENT--------PKRYAQTRP*DRFRIHNAHRGYMNTTNTSNSRQINYNESKIKL 181
           Y YRR  +         P+R       DRF+    HR    + + SNSR  + ++ K ++
Sbjct: 136 YNYRRSYSPRNSRPTGRPRRSRSHSDNDRFK----HRNRSFSRSKSNSRSRSKSQPKKEM 191

Query: 182 KRVSRLEARAYDQPKTKSRT*TMARVRGYSRY 277
           K  SR  + ++ + +  S+T +    +  SRY
Sbjct: 192 KAKSRSRSASHTKTRGTSKTDSKTHYKSGSRY 223

>FUSIP_HUMAN (O75494) FUS-interacting serine-arginine-rich protein 1|
           (TLS-associated protein with Ser-Arg repeats)
           (TLS-associated protein with SR repeats) (TASR)
           (TLS-associated serine-arginine protein) (TLS-associated
           SR protein) (40 kDa SR-repressor pr
          Length = 262

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
 Frame = +2

Query: 26  YQYRREENT--------PKRYAQTRP*DRFRIHNAHRGYMNTTNTSNSRQINYNESKIKL 181
           Y YRR  +         P+R       DRF+    HR    + + SNSR  + ++ K ++
Sbjct: 136 YNYRRSYSPRNSRPTGRPRRSRSHSDNDRFK----HRNRSFSRSKSNSRSRSKSQPKKEM 191

Query: 182 KRVSRLEARAYDQPKTKSRT*TMARVRGYSRY 277
           K  SR  + ++ + +  S+T +    +  SRY
Sbjct: 192 KAKSRSRSASHTKTRGTSKTDSKTHYKSGSRY 223

>KITH_STRGC (P47848) Thymidine kinase (EC 2.7.1.21)|
          Length = 191

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 16/47 (34%), Positives = 27/47 (57%)
 Frame = +1

Query: 115 IYEHNKHLEL*TDKLQ*VKNQTQACVQTRSASL*PTEDEVEDVNDGQ 255
           ++E +KHL L  DK++ +K   Q C  +R A++    D  + V DG+
Sbjct: 122 LFEGSKHLLLLADKIEEIKTICQYC--SRKATMVLRTDHGKPVYDGE 166

>SENP7_HUMAN (Q9BQF6) Sentrin-specific protease 7 (EC 3.4.22.-)|
           (Sentrin/SUMO-specific protease SENP7) (SUMO-1-specific
           protease 2)
          Length = 984

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 14/58 (24%), Positives = 31/58 (53%)
 Frame = +2

Query: 35  RREENTPKRYAQTRP*DRFRIHNAHRGYMNTTNTSNSRQINYNESKIKLKRVSRLEAR 208
           R+++      + T+P D   +++  RG  +    S ++ + Y++SK++L  +SR   R
Sbjct: 184 RKDDGISLLISDTQPED---LNSGSRGCDHLEQESRNKDVKYSDSKVELTLISRKTKR 238


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,872,989
Number of Sequences: 219361
Number of extensions: 620885
Number of successful extensions: 1441
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1439
length of database: 80,573,946
effective HSP length: 67
effective length of database: 65,876,759
effective search space used: 1581042216
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)