ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart56d11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TOP2_SCHPO (P08096) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoi... 33 0.41
2MARE2_CHICK (Q5ZKK1) Microtubule-associated protein RP/EB family... 32 0.54
3MARE2_MOUSE (Q8R001) Microtubule-associated protein RP/EB family... 32 0.54
4YJ85_YEAST (P47152) Hypothetical 19.0 kDa protein in NNF1-STE24 ... 32 0.70
5SPG7_DICDI (P22698) Spore germination protein 270-11 32 0.70
6ZAN_MOUSE (O88799) Zonadhesin precursor 32 0.91
7MARE2_HUMAN (Q15555) Microtubule-associated protein RP/EB family... 32 0.91
8SGS3_DROSI (P13729) Salivary glue protein Sgs-3 precursor 32 0.91
9TIMD1_RAT (O54947) Hepatitis A virus cellular receptor 1 homolog... 31 1.2
10DREB_HUMAN (Q16643) Drebrin (Developmentally-regulated brain pro... 31 1.2
11FIBH_BOMMO (P05790) Fibroin heavy chain precursor (Fib-H) (H-fib... 31 1.6
12DHR11_MOUSE (Q3U0B3) Dehydrogenase/reductase SDR family member 1... 30 2.0
13MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia p... 30 2.0
14CUTL1_HUMAN (P39880) Homeobox protein cut-like 1 (CCAAT displace... 30 3.5
15FMN2_MOUSE (Q9JL04) Formin-2 30 3.5
16ZAN_HUMAN (Q9Y493) Zonadhesin precursor 30 3.5
17V33P_ADE05 (P24940) 33 kDa phosphoprotein 30 3.5
18MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2) 30 3.5
19GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor (H... 29 4.5
20TBX22_HUMAN (Q9Y458) T-box transcription factor TBX22 (T-box pro... 29 4.5
21ZAN_PIG (Q28983) Zonadhesin precursor 29 5.9
22RXRG_HUMAN (P48443) Retinoic acid receptor RXR-gamma (Retinoid X... 29 5.9
23PCD12_MOUSE (O55134) Protocadherin-12 precursor (Vascular cadher... 29 5.9
24MYF5_XENLA (P24700) Myogenic factor 5 (Myf-5) 29 5.9
25DHR11_BOVIN (Q3ZBV9) Dehydrogenase/reductase SDR family member 1... 29 5.9
26BAT3_RAT (Q6MG49) Large proline-rich protein BAT3 (HLA-B-associa... 29 5.9
27COAT_CMVSI (Q00467) Coat protein (Capsid protein) (CP) 28 7.7
28LCMT2_ASPFU (Q4WVD1) Leucine carboxyl methyltransferase 2 (EC 2.... 28 7.7
29Y091_NPVOP (O10341) Hypothetical 29.3 kDa protein (ORF92) 28 7.7
30BAZ2A_MOUSE (Q91YE5) Bromodomain adjacent to zinc finger domain ... 28 7.7
31DIG1_CAEEL (Q09165) Mesocentin precursor 28 7.7
32ARI1B_HUMAN (Q8NFD5) AT-rich interactive domain-containing prote... 28 7.7
33YCF1_PINTH (P41647) Hypothetical 205.3 kDa protein ycf1 (ORF 1756) 28 7.7

>TOP2_SCHPO (P08096) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)|
          Length = 1485

 Score = 32.7 bits (73), Expect = 0.41
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -2

Query: 398  LPTESPTSPQSWTTSRPPAQQVLPVRTRPTHRATLTTQS 282
            +P  S T   S T + PP     P+R RPT RA  T ++
Sbjct: 1411 IPGSSSTPKASSTNAEPPEDSDSPIRKRPTRRAAATVKT 1449



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>MARE2_CHICK (Q5ZKK1) Microtubule-associated protein RP/EB family member 2|
          Length = 338

 Score = 32.3 bits (72), Expect = 0.54
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -1

Query: 432 RQSNDEHPSPLPADRVANLSPILDDLPTTSTAGLASENPADTPGYT 295
           RQ  D  P P P +++ NL P       + TAG A  +PA  PG T
Sbjct: 173 RQGQDALPPPDPGEQIFNL-PKKSHHANSPTAGAAKSSPASKPGST 217



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>MARE2_MOUSE (Q8R001) Microtubule-associated protein RP/EB family member 2|
           (APC-binding protein EB2) (End-binding protein 2) (EB2)
          Length = 326

 Score = 32.3 bits (72), Expect = 0.54
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -1

Query: 432 RQSNDEHPSPLPADRVANLSPILDDLPTTSTAGLASENPADTPGYT 295
           RQ  D  P P P +++ NL P       + TAG A  +PA  PG T
Sbjct: 172 RQGQDAIPPPDPGEQIFNL-PKKSHHANSPTAGAAKSSPASKPGST 216



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>YJ85_YEAST (P47152) Hypothetical 19.0 kDa protein in NNF1-STE24 intergenic|
           region
          Length = 169

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = -2

Query: 377 SPQSWTTSRPPAQQVLPVRTRPTHRATLTTQSTRRAHWTRCCLTGHRHR 231
           SP S  TS PP   + P  T P     +   S  R+  ++C LT H HR
Sbjct: 59  SPTSLATSHPPLSSMSPYMTIPQQYLYI---SKIRSKLSQCALTRHHHR 104



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>SPG7_DICDI (P22698) Spore germination protein 270-11|
          Length = 532

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 18/66 (27%), Positives = 29/66 (43%)
 Frame = -1

Query: 426 SNDEHPSPLPADRVANLSPILDDLPTTSTAGLASENPADTPGYTDNPINAPSSLDSLLFD 247
           S+   P+P P +          + PT +     +E P +TP  T+ P   PSS  S +  
Sbjct: 333 SDSSSPTPTPTETPTETPT---ETPTETPTETPTETPTETPTETETPTPTPSSSSSDVDS 389

Query: 246 GPSAPL 229
           G S+ +
Sbjct: 390 GSSSEI 395



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>ZAN_MOUSE (O88799) Zonadhesin precursor|
          Length = 5376

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 19/53 (35%), Positives = 27/53 (50%)
 Frame = -2

Query: 437 GPGKATMSIRHRCLPTESPTSPQSWTTSRPPAQQVLPVRTRPTHRATLTTQST 279
           GP ++T+      LP E PTSP   TT        + + T PT  AT+ T++T
Sbjct: 558 GPSESTVPT----LPMEQPTSPTKATT------VTIEIPTTPTEEATIPTETT 600



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>MARE2_HUMAN (Q15555) Microtubule-associated protein RP/EB family member 2|
           (APC-binding protein EB2) (End-binding protein 2) (EB2)
          Length = 327

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -1

Query: 432 RQSNDEHPSPLPADRVANLSPILDDLPTTSTAGLASENPADTPGYT 295
           RQ  D  P P P +++ NL P       + TAG A  +PA  PG T
Sbjct: 173 RQGQDAIPPPDPGEQIFNL-PKKSHHANSPTAGAAKSSPAAKPGST 217



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>SGS3_DROSI (P13729) Salivary glue protein Sgs-3 precursor|
          Length = 217

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 20/50 (40%), Positives = 25/50 (50%)
 Frame = -2

Query: 395 PTESPTSPQSWTTSRPPAQQVLPVRTRPTHRATLTTQSTRRAHWTRCCLT 246
           PT   TS  + TT  PP        T+PT ++T TT +T RA  T  C T
Sbjct: 71  PTCKSTSTTTTTTRAPP--------TKPTCKSTSTTTTTTRAPPTTTCKT 112



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>TIMD1_RAT (O54947) Hepatitis A virus cellular receptor 1 homolog precursor|
           (HAVcr-1) (T cell immunoglobulin and mucin
           domain-containing protein 1) (TIMD-1) (Kidney injury
           molecule 1) (KIM-1)
          Length = 307

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = -2

Query: 398 LPTESPTSPQSWTTSRPPAQQVLPVRTRPTHRATLTTQST 279
           +PT  PT P   TT+RP   +   + TR TH  T T  ST
Sbjct: 131 IPTSPPTRP---TTTRPTTTRPTTISTRSTHVPTSTRVST 167



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>DREB_HUMAN (Q16643) Drebrin (Developmentally-regulated brain protein)|
          Length = 648

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
 Frame = -1

Query: 411 PSPLPADRVANLSPILDDLPTTSTAGLASENPADTPGYTDNPINAPSS-LDSLLFDGPSA 235
           P P PA      SPILD   T + A  A   P + P     P   P S  + L+F     
Sbjct: 368 PPPPPAQETQEPSPILDSEETRAAAPQAWAGPMEEPPQAQAPPRGPGSPAEDLMF----- 422

Query: 234 PLIVESEDFVIS*PMKDNSAE 172
             +  +E  V++ P++  +A+
Sbjct: 423 --MESAEQAVLAAPVEPATAD 441



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>FIBH_BOMMO (P05790) Fibroin heavy chain precursor (Fib-H) (H-fibroin)|
          Length = 5263

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 24/72 (33%), Positives = 29/72 (40%)
 Frame = +2

Query: 206  TKSSLSTMSGADGPSNSSESSELGALIGLSV*PGVSAGFSLARPAVLVVGRSSRIGERLA 385
            ++S   T SGA   S +   S  GA  G  V  G  AG+     A    G  S  G   +
Sbjct: 4550 SESDFGTGSGAGAGSGAGAGSGAGAGYGAGVGAGYGAGYGAGAGAGYGAGAGSGAG---S 4606

Query: 386  TLSAGSGDGCSS 421
               AGSG G  S
Sbjct: 4607 GAGAGSGAGAGS 4618



 Score = 28.5 bits (62), Expect = 7.7
 Identities = 23/72 (31%), Positives = 28/72 (38%)
 Frame = +2

Query: 206  TKSSLSTMSGADGPSNSSESSELGALIGLSV*PGVSAGFSLARPAVLVVGRSSRIGERLA 385
            ++S   T SGA   S +   S  GA  G  V  G  AG+     A    G  S      +
Sbjct: 4203 SESDFGTGSGAGAGSGAGAGSGAGAGYGAGVGAGYGAGYGAGAGAGYGAGAGSGAA---S 4259

Query: 386  TLSAGSGDGCSS 421
               AGSG G  S
Sbjct: 4260 GAGAGSGAGAGS 4271



 Score = 28.5 bits (62), Expect = 7.7
 Identities = 23/72 (31%), Positives = 28/72 (38%)
 Frame = +2

Query: 206  TKSSLSTMSGADGPSNSSESSELGALIGLSV*PGVSAGFSLARPAVLVVGRSSRIGERLA 385
            ++S   T SGA   S +   S  GA  G     G  AG+     A    G  S  G   +
Sbjct: 3273 SESDFGTGSGAGAGSGAGAGSGAGAGSGAGAGSGAGAGYGAGVGAGYGAGAGSGAG---S 3329

Query: 386  TLSAGSGDGCSS 421
               AGSG G  S
Sbjct: 3330 GAGAGSGAGAGS 3341



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>DHR11_MOUSE (Q3U0B3) Dehydrogenase/reductase SDR family member 11 precursor (EC|
           1.-.-.-)
          Length = 260

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -2

Query: 434 PGKATMSIRH-RCLPTESPTSPQSWTTSRPPAQQVLPVRTRPTHRAT 297
           PG+A  +  H +CL  E       +  S PP  QV  ++ RPT + T
Sbjct: 214 PGEAAATYEHIKCLRPEDVAEAVIYVLSTPPHVQVGDIQMRPTEQVT 260



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>MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia protein 4|
            (Trithorax homolog 2)
          Length = 2715

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 14/24 (58%), Positives = 15/24 (62%)
 Frame = -2

Query: 395  PTESPTSPQSWTTSRPPAQQVLPV 324
            PT SPT+P SWT    P   VLPV
Sbjct: 2222 PTISPTAPTSWTLPPGPLLGVLPV 2245



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>CUTL1_HUMAN (P39880) Homeobox protein cut-like 1 (CCAAT displacement protein)|
            (CDP)
          Length = 1505

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 26/75 (34%), Positives = 30/75 (40%), Gaps = 8/75 (10%)
 Frame = -1

Query: 411  PSPLPADRVANLSPILDDLPTTSTAGLASENPADTPGYTDNPINA--------PSSLDSL 256
            P P PA   A  +P   +   TS A    E PA  P     P N+        PSSL S 
Sbjct: 1401 PLPSPASATATAAPAAPEDAATSAAAAPGEGPA-APSSAPPPSNSSSSSAPRRPSSLQS- 1458

Query: 255  LFDGPSAPLIVESED 211
            LF  P A    +S D
Sbjct: 1459 LFGLPEAAGARDSRD 1473



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>FMN2_MOUSE (Q9JL04) Formin-2|
          Length = 1567

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 8/54 (14%)
 Frame = -1

Query: 372 PILDDLPTTSTAGLASENP--------ADTPGYTDNPINAPSSLDSLLFDGPSA 235
           P+  DLP T T  L  E+P        ++TPGY   P     SL S  F  P A
Sbjct: 254 PVRPDLPET-TKSLVPEHPPSSGSHLTSETPGYATAPSAVTDSLSSPAFTFPEA 306



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>ZAN_HUMAN (Q9Y493) Zonadhesin precursor|
          Length = 2812

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 18/52 (34%), Positives = 24/52 (46%)
 Frame = -2

Query: 440 IGPGKATMSIRHRCLPTESPTSPQSWTTSRPPAQQVLPVRTRPTHRATLTTQ 285
           I P K T+      +PTE PT P    T +P      P  T PT   T++T+
Sbjct: 768 ISPEKLTIPTEKPTIPTEKPTIP----TEKPTISTEEP--TTPTEETTISTE 813



 Score = 28.9 bits (63), Expect = 5.9
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
 Frame = -2

Query: 440  IGPGKATMSIRHRCLPTESPTSPQSWTTSRP-----PAQQ--VLPVR-TRPTHRATLTTQ 285
            I P K T+S     +PTE PT P   TT        P ++  + P + T PT + T++T+
Sbjct: 908  ISPEKPTISTEKPTIPTEKPTIPTEETTISTEKLTIPTEKPTISPEKLTIPTEKPTISTE 967



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>V33P_ADE05 (P24940) 33 kDa phosphoprotein|
          Length = 229

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 20/43 (46%), Positives = 21/43 (48%)
 Frame = -2

Query: 395 PTESPTSPQSWTTSRPPAQQVLPVRTRPTHRATLTTQSTRRAH 267
           P +S T     TTS P A   LPVR RP  R    T  TR AH
Sbjct: 68  PQKSATGSSMATTSAPQAPPALPVR-RPNRR--WDTTGTRAAH 107



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>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)|
          Length = 5179

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -2

Query: 398  LPTESPTSPQSWTTSRPPAQQVLPVRTRPTHRATLTTQST 279
            LPT +P+ P S TT+ PP     P  T P+   T  +  T
Sbjct: 1449 LPTTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPT 1488



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>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor|
           (Hydroxyproline-rich glycoprotein 1)
          Length = 555

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 19/69 (27%), Positives = 33/69 (47%)
 Frame = -1

Query: 411 PSPLPADRVANLSPILDDLPTTSTAGLASENPADTPGYTDNPINAPSSLDSLLFDGPSAP 232
           PSP P+   +   P     P+ S +   S +P+ +P  + +PI +PS   S     P A 
Sbjct: 328 PSPAPSPPPSPAPPTPSPSPSPSPSPSPSPSPSPSPSPSPSPIPSPSPKPS---PSPVAV 384

Query: 231 LIVESEDFV 205
            +V ++D +
Sbjct: 385 KLVWADDAI 393



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>TBX22_HUMAN (Q9Y458) T-box transcription factor TBX22 (T-box protein 22)|
          Length = 520

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 16/63 (25%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
 Frame = -1

Query: 417 EHPSPLPA-DRVAN------LSPILDDLPTTSTAGLASENPADTPGYTDNPINAPSSLDS 259
           + P  LPA +R+A+      L+P++ ++P  S+ G+ +     +   +D  + AP+S + 
Sbjct: 383 QQPLVLPAPERLASSNSSQSLAPLMMEVPMLSSLGVTNSKSGSSEDSSDQYLQAPNSTNQ 442

Query: 258 LLF 250
           +L+
Sbjct: 443 MLY 445



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>ZAN_PIG (Q28983) Zonadhesin precursor|
          Length = 2476

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = -2

Query: 431 GKATMSIRHRCLPTESPTSPQSWTTSRPPAQQVLPVRTR--PTHRATLTTQST 279
           GK+T+      +PT+  T+P   TT  P  +  +P+     PT R T+ T+ T
Sbjct: 439 GKSTIPTEKPMVPTKRTTTPTERTTI-PAEKPTVPIEKPMVPTERTTIPTERT 490



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>RXRG_HUMAN (P48443) Retinoic acid receptor RXR-gamma (Retinoid X receptor|
           gamma)
          Length = 463

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = -1

Query: 342 TAGLASENPADT-PGYTDNPINAPSSLDSL 256
           +A L++  P D+ P YTD P++AP +L ++
Sbjct: 30  SAALSTGKPMDSHPSYTDTPVSAPRTLSAV 59



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>PCD12_MOUSE (O55134) Protocadherin-12 precursor (Vascular cadherin-2) (Vascular|
            endothelial cadherin-2) (VE-cadherin-2) (VE-cad-2)
          Length = 1180

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 17/46 (36%), Positives = 19/46 (41%)
 Frame = -1

Query: 369  ILDDLPTTSTAGLASENPADTPGYTDNPINAPSSLDSLLFDGPSAP 232
            IL  L   S A  A  NP + P     P+   S L SLL  G   P
Sbjct: 931  ILRSLVRLSVAAFAERNPVEEPAGDSPPVQQISQLLSLLHQGQFQP 976



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>MYF5_XENLA (P24700) Myogenic factor 5 (Myf-5)|
          Length = 255

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +2

Query: 17  ENLPSCSSPKWLNTQNWFDHCWGLCSDLQ 103
           + +  CSSP+W    + FD+ +  CSDLQ
Sbjct: 165 DGMSDCSSPQWSGRNSSFDNVY--CSDLQ 191



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>DHR11_BOVIN (Q3ZBV9) Dehydrogenase/reductase SDR family member 11 precursor (EC|
           1.-.-.-)
          Length = 255

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = -2

Query: 434 PGKATMSIRH-RCLPTESPTSPQSWTTSRPPAQQVLPVRTRPTHRAT 297
           P KA  +  H +CL  E       +  S PP  Q+  ++ RPT + T
Sbjct: 209 PEKAAATYEHMKCLKPEDVAEAVIYVLSTPPHVQIGDIQMRPTEQVT 255



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>BAT3_RAT (Q6MG49) Large proline-rich protein BAT3 (HLA-B-associated|
           transcript 3)
          Length = 1096

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 23/70 (32%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
 Frame = -1

Query: 435 TRQSNDEHPSPLPADRVANLSPILDDLPTTSTAGLASENPADTPGYTDNPINAPSSLDSL 256
           T Q+    P+P PA   A  S       T +TAG A   PA  P     P  A      L
Sbjct: 566 TAQAQAPAPAPAPAPAPATASASAGTTNTATTAGPAPGGPAQPP--PPQPSAADLQFSQL 623

Query: 255 LFD--GPSAP 232
           L +  GP+ P
Sbjct: 624 LGNLLGPAGP 633



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>COAT_CMVSI (Q00467) Coat protein (Capsid protein) (CP)|
          Length = 220

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
 Frame = -3

Query: 415 ASVTAAC---RQSRQPLPN--PGRPPDHQHSRSCQ 326
           A +TA C   R+ R+P P+  P R P HQH R  Q
Sbjct: 169 APLTATCALDREVRRPCPSAYPERQPHHQHCRGHQ 203



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>LCMT2_ASPFU (Q4WVD1) Leucine carboxyl methyltransferase 2 (EC 2.1.1.-)|
          Length = 1047

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = -1

Query: 432 RQSNDEHPSPLPADRVANLSPILDDLPTTSTAGLASENPADTPGYTDNPI 283
           R  + E PS LPA+  A+   + DD        L +EN   +P     P+
Sbjct: 819 RSISAELPSKLPANLAADFPGLKDDFKLPQALSLVTENAHSSPLRISGPV 868



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>Y091_NPVOP (O10341) Hypothetical 29.3 kDa protein (ORF92)|
          Length = 279

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 17/51 (33%), Positives = 22/51 (43%)
 Frame = -1

Query: 411 PSPLPADRVANLSPILDDLPTTSTAGLASENPADTPGYTDNPINAPSSLDS 259
           P+P P+     LSP     PT S     + +P  TP  T +P   PS   S
Sbjct: 79  PTPTPSP---TLSPTPSPTPTPSPTPSPTPSPTPTPSPTPSPTPTPSPTPS 126



 Score = 28.5 bits (62), Expect = 7.7
 Identities = 18/51 (35%), Positives = 22/51 (43%)
 Frame = -1

Query: 411 PSPLPADRVANLSPILDDLPTTSTAGLASENPADTPGYTDNPINAPSSLDS 259
           P+P PA     LSP     PT S     +  P+ TP  T +P   PS   S
Sbjct: 71  PTPTPA-----LSPTPTPSPTLSPTPSPTPTPSPTPSPTPSPTPTPSPTPS 116



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>BAZ2A_MOUSE (Q91YE5) Bromodomain adjacent to zinc finger domain 2A (Transcription|
            termination factor I-interacting protein 5)
            (TTF-I-interacting protein 5) (Tip5)
          Length = 1850

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 23/70 (32%), Positives = 31/70 (44%)
 Frame = -1

Query: 420  DEHPSPLPADRVANLSPILDDLPTTSTAGLASENPADTPGYTDNPINAPSSLDSLLFDGP 241
            D  P+P PA        + +D PT S   LAS  P +TPG   NP +      + L  G 
Sbjct: 1280 DAAPTPPPA--------VSEDQPTPSLQLLASSKPMNTPG-AANPCSPVQLSSTHLPGGT 1330

Query: 240  SAPLIVESED 211
               L  +SE+
Sbjct: 1331 PKRLSGDSEE 1340



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>DIG1_CAEEL (Q09165) Mesocentin precursor|
          Length = 13100

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 18/45 (40%), Positives = 21/45 (46%)
 Frame = -1

Query: 408   SPLPADRVANLSPILDDLPTTSTAGLASENPADTPGYTDNPINAP 274
             SPLP D   N   IL D      +G+ + NP D  GY   PI  P
Sbjct: 11200 SPLPTDASGNY--ILPD------SGVTTANPTDENGYAIYPITKP 11236



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>ARI1B_HUMAN (Q8NFD5) AT-rich interactive domain-containing protein 1B (ARID|
           domain-containing protein 1B) (Osa homolog 2) (hOsa2)
           (p250R) (BRG1-binding protein hELD/OSA1)
           (BRG1-associated factor 250b) (BAF250B)
          Length = 2236

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
 Frame = -1

Query: 417 EHPSPLPADRVANLSPILDDLPTTSTAGLAS----ENPADTPGYTDNPINAPSS 268
           E PS LP     +LS  +DDLPT + A L+S         + G   NP  +P S
Sbjct: 660 ERPSSLP-----DLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFS 708



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>YCF1_PINTH (P41647) Hypothetical 205.3 kDa protein ycf1 (ORF 1756)|
          Length = 1756

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -2

Query: 380 TSPQSWTTSRPPAQQVLPVRTRPTHRATLTTQSTRRAHWT 261
           T P  W T     + + P R +P HR+    QS +R  W+
Sbjct: 874 TFPDKWETQGMQIKLLFPFRLKPWHRS--KPQSAKRLRWS 911


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,697,530
Number of Sequences: 219361
Number of extensions: 1270470
Number of successful extensions: 4650
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 4211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4636
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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