>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                        
Query: 224     acgatgagcggtgccgatggcccgtcaaacagcagcgagtccagtgagctcggcgcg 280
               ||||||||||| ||||| |||||||| | |||||||| |||||| ||||||| ||||
Sbjct: 3496456 acgatgagcggcgccgacggcccgtcgagcagcagcgcgtccagcgagctcgccgcg 3496400

>dbj|AK068306.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136H07, full
            insert sequence
          Length = 1612

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                     
Query: 224  acgatgagcggtgccgatggcccgtcaaacagcagcgagtccagtgagctcggcgcg 280
            ||||||||||| ||||| |||||||| | |||||||| |||||| ||||||| ||||
Sbjct: 1338 acgatgagcggcgccgacggcccgtcgagcagcagcgcgtccagcgagctcgccgcg 1282

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                        
Query: 224     acgatgagcggtgccgatggcccgtcaaacagcagcgagtccagtgagctcggcgcg 280
               ||||||||||| ||||| |||||||| | |||||||| |||||| ||||||| ||||
Sbjct: 3496402 acgatgagcggcgccgacggcccgtcgagcagcagcgcgtccagcgagctcgccgcg 3496346

>emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007_H06 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 103647

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                      
Query: 224   acgatgagcggtgccgatggcccgtcaaacagcagcgagtccagtgagctcggcgcg 280
             ||||||||||| ||||| |||||||| | |||||||| |||||| ||||||| ||||
Sbjct: 11384 acgatgagcggcgccgacggcccgtcgagcagcagcgcgtccagcgagctcgccgcg 11328

>emb|AL713902.2|CNS07YQ2 Oryza sativa chromosome 12, . BAC OJ1494_F10 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 116371

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                      
Query: 224   acgatgagcggtgccgatggcccgtcaaacagcagcgagtccagtgagctcggcgcg 280
             ||||||||||| ||||| |||||||| | |||||||| |||||| ||||||| ||||
Sbjct: 35458 acgatgagcggcgccgacggcccgtcgagcagcagcgcgtccagcgagctcgccgcg 35514

>gb|AC146891.3| Dasypus novemcinctus clone VMRC5-364E4, complete sequence
          Length = 133673

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 363   ccaggattggggagaggttggc 384
             ||||||||||||||||||||||
Sbjct: 28626 ccaggattggggagaggttggc 28647

>gb|AC160559.5| Mus musculus BAC clone RP24-404N24 from chromosome 10, complete
             sequence
          Length = 157670

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 104   tgattgaaagcttaaaatttc 124
             |||||||||||||||||||||
Sbjct: 79258 tgattgaaagcttaaaatttc 79278

>emb|BX927162.6| Zebrafish DNA sequence from clone CH211-147J13 in linkage group 18,
             complete sequence
          Length = 90057

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 173   tcagctgaattatccttcata 193
             |||||||||||||||||||||
Sbjct: 79908 tcagctgaattatccttcata 79928

>gb|AC168058.4| Mus musculus BAC clone RP24-134D11 from chromosome 10, complete
             sequence
          Length = 199406

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 104   tgattgaaagcttaaaatttc 124
             |||||||||||||||||||||
Sbjct: 36435 tgattgaaagcttaaaatttc 36415

>ref|XM_594047.2| PREDICTED: Bos taurus similar to Probable transcription factor PML
            (Tripartite motif protein 19) (RING finger protein 71)
            (LOC515938), mRNA
          Length = 4415

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 251  aacagcagcgagtccagtga 270
            ||||||||||||||||||||
Sbjct: 1796 aacagcagcgagtccagtga 1815

>ref|XM_657700.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5188.2), mRNA
          Length = 1236

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 gtgagctcggcgcgttgatt 286
           ||||||||||||||||||||
Sbjct: 833 gtgagctcggcgcgttgatt 814

>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome
          Length = 2799802

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   tacgatgagcggtgccgatg 242
             ||||||||||||||||||||
Sbjct: 17809 tacgatgagcggtgccgatg 17828

>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome
          Length = 2878529

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   tacgatgagcggtgccgatg 242
             ||||||||||||||||||||
Sbjct: 17816 tacgatgagcggtgccgatg 17835

>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome
          Length = 2809422

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   tacgatgagcggtgccgatg 242
             ||||||||||||||||||||
Sbjct: 17832 tacgatgagcggtgccgatg 17851

>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome
          Length = 2821361

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   tacgatgagcggtgccgatg 242
             ||||||||||||||||||||
Sbjct: 17805 tacgatgagcggtgccgatg 17824

>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome
          Length = 2872769

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   tacgatgagcggtgccgatg 242
             ||||||||||||||||||||
Sbjct: 17832 tacgatgagcggtgccgatg 17851

>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome,
             strain:MW2
          Length = 2820462

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   tacgatgagcggtgccgatg 242
             ||||||||||||||||||||
Sbjct: 17809 tacgatgagcggtgccgatg 17828

>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome
          Length = 2814816

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   tacgatgagcggtgccgatg 242
             ||||||||||||||||||||
Sbjct: 17815 tacgatgagcggtgccgatg 17834

>dbj|AP003732.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-682D22, complete
             sequence
          Length = 193132

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 50    ttgaatacacagaactggtttgat 73
             ||||||||||||||||||| ||||
Sbjct: 37884 ttgaatacacagaactggtgtgat 37907

>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome
          Length = 2902619

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   tacgatgagcggtgccgatg 242
             ||||||||||||||||||||
Sbjct: 17797 tacgatgagcggtgccgatg 17816

>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome
          Length = 2742531

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   tacgatgagcggtgccgatg 242
             ||||||||||||||||||||
Sbjct: 17791 tacgatgagcggtgccgatg 17810


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,522,809
Number of Sequences: 3902068
Number of extensions: 3522809
Number of successful extensions: 67877
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67758
Number of HSP's gapped (non-prelim): 119
length of query: 441
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 419
effective length of database: 17,147,199,772
effective search space: 7184676704468
effective search space used: 7184676704468
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)