ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart56d02 |
|---|---|
| Clone Library Name | barley_pub |
>TCMO_PETCR (Q43033) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic| acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) Length = 506 Score = 79.7 bits (195), Expect = 2e-15 Identities = 40/59 (67%), Positives = 42/59 (71%) Frame = -2 Query: 387 RRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQDKIDTTEKPGQFSNQILRHATIVCKP 211 RRSCP GRLVQNFELLPPPGQ KIDT EK GQFS QIL+H+TIVCKP Sbjct: 445 RRSCPGIILALPILGIVIGRLVQNFELLPPPGQSKIDTAEKGGQFSLQILKHSTIVCKP 503
>TCMO_ZINEL (Q43240) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic| acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) Length = 505 Score = 78.6 bits (192), Expect = 3e-15 Identities = 39/59 (66%), Positives = 42/59 (71%) Frame = -2 Query: 387 RRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQDKIDTTEKPGQFSNQILRHATIVCKP 211 RRSCP GRLVQNFELLPPPGQDK+DTTEK GQFS IL+H+TIV KP Sbjct: 444 RRSCPGIILALPILGITIGRLVQNFELLPPPGQDKVDTTEKGGQFSLHILKHSTIVAKP 502
>TCMO_CICAR (O81928) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic| acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) Length = 505 Score = 78.2 bits (191), Expect = 4e-15 Identities = 39/59 (66%), Positives = 41/59 (69%) Frame = -2 Query: 387 RRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQDKIDTTEKPGQFSNQILRHATIVCKP 211 RRSCP GRLVQNFELLPPPGQ KIDT EK GQFS IL+H+TIVCKP Sbjct: 443 RRSCPGIILALPILGITLGRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVCKP 501
>TCMO_POPTM (O24312) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic| acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) Length = 505 Score = 75.1 bits (183), Expect = 4e-14 Identities = 38/59 (64%), Positives = 41/59 (69%) Frame = -2 Query: 387 RRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQDKIDTTEKPGQFSNQILRHATIVCKP 211 RRSCP GRLVQNFELLPPPGQ KIDT+EK GQFS IL+H+TIV KP Sbjct: 444 RRSCPGIILALPILGITLGRLVQNFELLPPPGQSKIDTSEKGGQFSLHILKHSTIVAKP 502
>TCMO_POPKI (Q43054) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic| acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) Length = 505 Score = 75.1 bits (183), Expect = 4e-14 Identities = 38/59 (64%), Positives = 41/59 (69%) Frame = -2 Query: 387 RRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQDKIDTTEKPGQFSNQILRHATIVCKP 211 RRSCP GRLVQNFELLPPPGQ KIDT+EK GQFS IL+H+TIV KP Sbjct: 444 RRSCPGIILALPILGITLGRLVQNFELLPPPGQSKIDTSEKGGQFSLHILKHSTIVAKP 502
>TCMO_PEA (Q43067) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic| acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) Length = 505 Score = 75.1 bits (183), Expect = 4e-14 Identities = 38/59 (64%), Positives = 41/59 (69%) Frame = -2 Query: 387 RRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQDKIDTTEKPGQFSNQILRHATIVCKP 211 RRSCP GRLVQNFELLPPPGQ KIDT+EK GQFS IL+H+TIV KP Sbjct: 444 RRSCPGIILALPILGITIGRLVQNFELLPPPGQSKIDTSEKGGQFSLHILKHSTIVAKP 502
>TCMO_HELTU (Q04468) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic| acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) Length = 505 Score = 74.3 bits (181), Expect = 6e-14 Identities = 38/59 (64%), Positives = 40/59 (67%) Frame = -2 Query: 387 RRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQDKIDTTEKPGQFSNQILRHATIVCKP 211 RRSCP GRLVQNFELLPPPGQ KIDT EK GQFS IL+H+TIV KP Sbjct: 444 RRSCPGIILALPILGITIGRLVQNFELLPPPGQSKIDTDEKGGQFSLHILKHSTIVAKP 502
>TCMO_GLYEC (Q96423) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic| acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) Length = 505 Score = 73.9 bits (180), Expect = 8e-14 Identities = 37/59 (62%), Positives = 40/59 (67%) Frame = -2 Query: 387 RRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQDKIDTTEKPGQFSNQILRHATIVCKP 211 RRSCP GRLVQNFELLPPPGQ K+DT EK GQFS IL+H+TIV KP Sbjct: 444 RRSCPGIILALPILGITLGRLVQNFELLPPPGQSKLDTAEKGGQFSLHILKHSTIVAKP 502
>TCMO_SOYBN (Q42797) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic| acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) Length = 506 Score = 73.6 bits (179), Expect = 1e-13 Identities = 37/59 (62%), Positives = 41/59 (69%) Frame = -2 Query: 387 RRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQDKIDTTEKPGQFSNQILRHATIVCKP 211 RRSCP GRLVQNFELLPPPGQ +IDT+EK GQFS IL+H+TIV KP Sbjct: 445 RRSCPGIILALPILGITLGRLVQNFELLPPPGQSQIDTSEKGGQFSLHILKHSTIVAKP 503
>TCMO_PHAAU (P37115) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic| acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) Length = 505 Score = 73.2 bits (178), Expect = 1e-13 Identities = 36/59 (61%), Positives = 41/59 (69%) Frame = -2 Query: 387 RRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQDKIDTTEKPGQFSNQILRHATIVCKP 211 RRSCP GRLVQNFELLPPPGQ +IDT+EK GQFS IL+H+T+V KP Sbjct: 444 RRSCPGIILALPILGITLGRLVQNFELLPPPGQSQIDTSEKGGQFSLHILKHSTVVAKP 502
>TCMO_CATRO (P48522) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic| acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) Length = 505 Score = 73.2 bits (178), Expect = 1e-13 Identities = 37/59 (62%), Positives = 41/59 (69%) Frame = -2 Query: 387 RRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQDKIDTTEKPGQFSNQILRHATIVCKP 211 RRSCP GRLVQNFELLPPPG+ KIDT+EK GQFS IL+H+TIV KP Sbjct: 444 RRSCPGIILALPILGITIGRLVQNFELLPPPGKSKIDTSEKGGQFSLHILKHSTIVLKP 502
>TCMO_MEDSA (P37114) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic| acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) Length = 506 Score = 72.4 bits (176), Expect = 2e-13 Identities = 37/59 (62%), Positives = 40/59 (67%) Frame = -2 Query: 387 RRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQDKIDTTEKPGQFSNQILRHATIVCKP 211 RRSCP GRLVQN ELLPPPGQ KIDT+EK GQFS IL+H+TIV KP Sbjct: 445 RRSCPGIILALPILGITIGRLVQNVELLPPPGQSKIDTSEKGGQFSLHILKHSTIVAKP 503
>TCMO_RUTGR (Q9AR74) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic| acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) Length = 506 Score = 72.0 bits (175), Expect = 3e-13 Identities = 37/59 (62%), Positives = 40/59 (67%) Frame = -2 Query: 387 RRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQDKIDTTEKPGQFSNQILRHATIVCKP 211 RRSCP GR+VQNFELLPPPGQ KIDT+EK GQFS IL H+TIV KP Sbjct: 444 RRSCPGIILALPILGITIGRMVQNFELLPPPGQSKIDTSEKGGQFSLFILNHSTIVLKP 502
>TCMO_ARATH (P92994) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic| acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) Length = 505 Score = 70.5 bits (171), Expect = 9e-13 Identities = 35/59 (59%), Positives = 39/59 (66%) Frame = -2 Query: 387 RRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQDKIDTTEKPGQFSNQILRHATIVCKP 211 RRSCP GR+VQNFELLPPPGQ K+DT+EK GQFS IL H+ IV KP Sbjct: 444 RRSCPGIILALPILGITIGRMVQNFELLPPPGQSKVDTSEKGGQFSLHILNHSIIVMKP 502
>POLG_DEN2U (P18356) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1)] (Fragment) Length = 679 Score = 33.5 bits (75), Expect = 0.13 Identities = 17/61 (27%), Positives = 31/61 (50%) Frame = +2 Query: 104 TTGKHQNAKYRVTCIDRSPRISVRA*PRSELNQASSGLQTMVACLRIWLLNCPGFSVVSI 283 TTG+H+ K V + P + + R+E +S G + IW+L PGF++++ Sbjct: 96 TTGEHRREKRSVALV---PHVGMGLETRTETWMSSEGAWKHAQRIEIWILRHPGFTIMAA 152 Query: 284 L 286 + Sbjct: 153 I 153
>POLG_DEN2J (P07564) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1); Nonstructural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; Length = 3391 Score = 33.1 bits (74), Expect = 0.17 Identities = 17/61 (27%), Positives = 31/61 (50%) Frame = +2 Query: 104 TTGKHQNAKYRVTCIDRSPRISVRA*PRSELNQASSGLQTMVACLRIWLLNCPGFSVVSI 283 TTG+H+ K V + P + + R+E +S G V + W+L PGF++++ Sbjct: 196 TTGEHRREKRSVALV---PHVGMGLETRTETWMSSEGAWKHVQRIETWILRHPGFTIMAA 252 Query: 284 L 286 + Sbjct: 253 I 253
>C79A2_ARATH (Q9FLC8) Cytochrome P450 79A2 (EC 1.-.-.-)| Length = 529 Score = 32.0 bits (71), Expect = 0.37 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = -2 Query: 387 RRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQDKIDTTE 268 RR C RL+Q F LP PG++KID +E Sbjct: 464 RRGCMGVDIGSAMTYMLLARLIQGFTWLPVPGKNKIDISE 503
>C77A1_SOLME (P37123) Cytochrome P450 77A1 (EC 1.14.-.-) (CYPLXXVIIA1)| (P-450EG6) (Fragment) Length = 499 Score = 32.0 bits (71), Expect = 0.37 Identities = 15/41 (36%), Positives = 19/41 (46%) Frame = -2 Query: 387 RRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQDKIDTTEK 265 RR CP R+VQ FE PG +K+D +EK Sbjct: 440 RRICPGLGMATVHVNLMLARMVQEFEWFAYPGNNKVDFSEK 480
>POLG_DEN2P (P12823) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1); Nonstructural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; Length = 3388 Score = 31.6 bits (70), Expect = 0.48 Identities = 16/61 (26%), Positives = 30/61 (49%) Frame = +2 Query: 104 TTGKHQNAKYRVTCIDRSPRISVRA*PRSELNQASSGLQTMVACLRIWLLNCPGFSVVSI 283 TTG+H+ K V + P + + R+E +S G + W+L PGF++++ Sbjct: 196 TTGEHRREKRSVALV---PHVGMGLETRTETWMSSEGAWKHAQRIETWILRHPGFTIMAA 252 Query: 284 L 286 + Sbjct: 253 I 253
>POLG_DEN1S (P33478) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1); Nonstructural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; Length = 3396 Score = 31.6 bits (70), Expect = 0.48 Identities = 18/68 (26%), Positives = 32/68 (47%) Frame = +2 Query: 107 TGKHQNAKYRVTCIDRSPRISVRA*PRSELNQASSGLQTMVACLRIWLLNCPGFSVVSIL 286 TG+H+ K V +P + + R+E +S G + + W L PGF+V+++ Sbjct: 197 TGEHRRDKRSVAL---APHVGLGLETRTETWMSSEGAWKQIQRVETWALRHPGFTVIALF 253 Query: 287 SCPGGGSS 310 G+S Sbjct: 254 LAHAIGTS 261
>POLG_DEN1W (P17763) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1); Nonstructural protein 2A (NS2A)] (Fragment) Length = 1226 Score = 31.6 bits (70), Expect = 0.48 Identities = 18/68 (26%), Positives = 32/68 (47%) Frame = +2 Query: 107 TGKHQNAKYRVTCIDRSPRISVRA*PRSELNQASSGLQTMVACLRIWLLNCPGFSVVSIL 286 TG+H+ K V +P + + R+E +S G + + W L PGF+V+++ Sbjct: 197 TGEHRRDKRSVAL---APHVGLGLETRTETWMSSEGAWKQIQKVETWALRHPGFTVIALF 253 Query: 287 SCPGGGSS 310 G+S Sbjct: 254 LAHAIGTS 261
>POLG_DEN2N (P14340) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1); Nonstructural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; Length = 3391 Score = 31.6 bits (70), Expect = 0.48 Identities = 16/61 (26%), Positives = 30/61 (49%) Frame = +2 Query: 104 TTGKHQNAKYRVTCIDRSPRISVRA*PRSELNQASSGLQTMVACLRIWLLNCPGFSVVSI 283 TTG+H+ K V + P + + R+E +S G + W+L PGF++++ Sbjct: 196 TTGEHRREKRSVALV---PHVGMGLETRTETWMSSEGAWKHAQRIETWILRHPGFTIMAA 252 Query: 284 L 286 + Sbjct: 253 I 253
>US23_HCMVA (P09701) Tegument protein US23 (HHLF7)| Length = 592 Score = 31.2 bits (69), Expect = 0.63 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +1 Query: 304 QQLEVLHQASERDADDGQREDDPGAAP 384 Q LEV+H A D + G+ +DD GA P Sbjct: 450 QNLEVIHDALADDEEQGEDDDDSGAEP 476
>PGTA_RAT (Q08602) Geranylgeranyl transferase type-2 alpha subunit (EC| 2.5.1.60) (Geranylgeranyl transferase type II alpha subunit) (Rab geranylgeranyltransferase alpha subunit) (Rab geranyl-geranyltransferase alpha subunit) (Rab GG transferase alpha) (Ra Length = 567 Score = 31.2 bits (69), Expect = 0.63 Identities = 28/104 (26%), Positives = 43/104 (41%) Frame = +2 Query: 41 NLQHRRLK*RPIAQHQRKIKLTTGKHQNAKYRVTCIDRSPRISVRA*PRSELNQASSGLQ 220 +L H RL+ P A + NA V + PR+ + L Q S+ +Q Sbjct: 469 DLSHNRLRALPPALAALRCLEVLQASDNALENVDGVANLPRLQELLLCNNRLQQ-SAAIQ 527 Query: 221 TMVACLRIWLLNCPGFSVVSILSCPGGGSSSKFCTRRPSVMPMM 352 +V+C R+ LLN G S+ C G + PSV ++ Sbjct: 528 PLVSCPRLVLLNLQGNSL-----CQEEGIQERLAEMLPSVSSIL 566
>POLG_DEN1C (P27913) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1)] (Fragment) Length = 791 Score = 31.2 bits (69), Expect = 0.63 Identities = 18/68 (26%), Positives = 31/68 (45%) Frame = +2 Query: 107 TGKHQNAKYRVTCIDRSPRISVRA*PRSELNQASSGLQTMVACLRIWLLNCPGFSVVSIL 286 TG+H+ K V +P + + R+E +S G + + W L PGF+V+ + Sbjct: 197 TGEHRRDKRSVAL---APHVGLGLETRTETWMSSEGAWKQIQKVETWALRHPGFTVIGLF 253 Query: 287 SCPGGGSS 310 G+S Sbjct: 254 LAHAIGTS 261
>POLG_DEN1A (P27912) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1)] (Fragment) Length = 792 Score = 30.8 bits (68), Expect = 0.82 Identities = 18/68 (26%), Positives = 30/68 (44%) Frame = +2 Query: 107 TGKHQNAKYRVTCIDRSPRISVRA*PRSELNQASSGLQTMVACLRIWLLNCPGFSVVSIL 286 TG+H+ K V P + + R+E +S G + + W L PGF+V+ + Sbjct: 197 TGEHRRDKRSVAL---DPHVGLGLETRTETWMSSEGAWKQIQKVETWALRHPGFTVIGLF 253 Query: 287 SCPGGGSS 310 G+S Sbjct: 254 LAHAIGTS 261
>POLG_DEN18 (P27910) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1)] (Fragment) Length = 792 Score = 30.8 bits (68), Expect = 0.82 Identities = 18/68 (26%), Positives = 30/68 (44%) Frame = +2 Query: 107 TGKHQNAKYRVTCIDRSPRISVRA*PRSELNQASSGLQTMVACLRIWLLNCPGFSVVSIL 286 TG+H+ K V P + + R+E +S G + + W L PGF+V+ + Sbjct: 197 TGEHRRDKRSVAL---DPHVGLGLETRTETWMSSEGAWKQIQKVETWALRHPGFTVIGLF 253 Query: 287 SCPGGGSS 310 G+S Sbjct: 254 LAHAIGTS 261
>Y3882_STRCO (O54625) UPF0161 protein SCO3882| Length = 124 Score = 30.4 bits (67), Expect = 1.1 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = +1 Query: 259 PWLLGGVDLVLPRRRQQLEVLHQASERDADDGQREDDP 372 PW LGGVD V PR+R + + +A+ R G +P Sbjct: 59 PWSLGGVDHVPPRKRPRWHEMLRAAWRARKGGTSAAEP 96
>SMCL_ARATH (Q8VY05) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily C member (AtSwi3C) Length = 985 Score = 30.0 bits (66), Expect = 1.4 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 4/55 (7%) Frame = -1 Query: 247 PDPQARHHRLQATRGLIEFRSRSCAYADAGRSIYAC----DSVFCILVFPSSKFN 95 PDP A L+ +E+ SC+ AD R Y C D C F S KF+ Sbjct: 290 PDPMAADELLKQEGPAVEYHCNSCS-ADCSRKRYHCPKQADFDLCTECFNSGKFS 343
>POLG_DEN27 (P29991) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1); Nonstructural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; Length = 3391 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/61 (26%), Positives = 30/61 (49%) Frame = +2 Query: 104 TTGKHQNAKYRVTCIDRSPRISVRA*PRSELNQASSGLQTMVACLRIWLLNCPGFSVVSI 283 T G+H+ K V + P + + R+E +S G V + W+L PGF++++ Sbjct: 196 TMGEHRREKRSVALV---PHVGMGLETRTETWMSSEGAWKHVQRIETWILRHPGFTMMAA 252 Query: 284 L 286 + Sbjct: 253 I 253
>POLG_DEN26 (P29990) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1); Nonstructural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; Length = 3391 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/61 (26%), Positives = 30/61 (49%) Frame = +2 Query: 104 TTGKHQNAKYRVTCIDRSPRISVRA*PRSELNQASSGLQTMVACLRIWLLNCPGFSVVSI 283 T G+H+ K V + P + + R+E +S G V + W+L PGF++++ Sbjct: 196 TMGEHRRQKRSVALV---PHVGMGLETRTETWMSSEGAWKHVQRIETWILRHPGFTMMAA 252 Query: 284 L 286 + Sbjct: 253 I 253
>PHK_SYNP6 (Q5N0G7) Probable phosphoketolase (EC 4.1.2.-)| Length = 796 Score = 29.6 bits (65), Expect = 1.8 Identities = 10/25 (40%), Positives = 17/25 (68%) Frame = -2 Query: 306 LPPPGQDKIDTTEKPGQFSNQILRH 232 +P PG+ + D+T GQF +++RH Sbjct: 391 VPAPGKSRADSTRPLGQFLREVIRH 415
>EPIB_STAEP (P30195) Epidermin biosynthesis protein epiB| Length = 986 Score = 29.6 bits (65), Expect = 1.8 Identities = 19/65 (29%), Positives = 35/65 (53%) Frame = +3 Query: 6 QEVLHHIANYLEIYNIDASNEDQ*PNTKEKLNLLLGNTKMQNTESHA*IDLPASAYAHDR 185 +E++HH NY+ ++ S ++ P +N +L N ++ NT + ++LP S D Sbjct: 476 KEIVHHYNNYMNENGLEISQLNEGPLNSRNVN-ILNNNRIYNTCLN--LNLPKS----DI 528 Query: 186 DLNSI 200 D+N I Sbjct: 529 DINDI 533
>RUVX_CAMJR (Q5HVD6) Putative Holliday junction resolvase (EC 3.1.-.-)| Length = 127 Score = 28.9 bits (63), Expect = 3.1 Identities = 20/63 (31%), Positives = 31/63 (49%) Frame = +2 Query: 143 CIDRSPRISVRA*PRSELNQASSGLQTMVACLRIWLLNCPGFSVVSILSCPGGGSSSKFC 322 CID+ + + A R NQA++ ++ ++ I LL I+ P GGSS + Sbjct: 18 CIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLL---------IVGIPKGGSSEEEM 68 Query: 323 TRR 331 TRR Sbjct: 69 TRR 71
>RUVX_CAMJE (Q9PHN2) Putative Holliday junction resolvase (EC 3.1.-.-)| Length = 127 Score = 28.9 bits (63), Expect = 3.1 Identities = 20/63 (31%), Positives = 31/63 (49%) Frame = +2 Query: 143 CIDRSPRISVRA*PRSELNQASSGLQTMVACLRIWLLNCPGFSVVSILSCPGGGSSSKFC 322 CID+ + + A R NQA++ ++ ++ I LL I+ P GGSS + Sbjct: 18 CIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLL---------IVGIPKGGSSEEEM 68 Query: 323 TRR 331 TRR Sbjct: 69 TRR 71
>POLG_DEN2D (P30026) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1)] (Fragment) Length = 1127 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/63 (23%), Positives = 29/63 (46%) Frame = +2 Query: 98 KLTTGKHQNAKYRVTCIDRSPRISVRA*PRSELNQASSGLQTMVACLRIWLLNCPGFSVV 277 + TTG+H K V + P + + +E +S G + W+L PGF+++ Sbjct: 194 RTTTGEHGREKRSVALV---PHVGMGLETGTETWMSSDGAWKRACRMETWILRHPGFTIM 250 Query: 278 SIL 286 + + Sbjct: 251 AAI 253
>Y4313_STRAW (Q82FE1) UPF0161 protein SAV4313| Length = 117 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +1 Query: 259 PWLLGGVDLVLPRRRQQLEVLHQASERDADDGQREDDP 372 PW LGGVD V PR+R + + + + R G +P Sbjct: 59 PWSLGGVDHVPPRKRPRWHEMLRNAWRARKGGPSAAEP 96
>FALZ_HUMAN (Q12830) Fetal Alzheimer antigen (Fetal Alz-50-reactive clone 1)| Length = 810 Score = 28.1 bits (61), Expect = 5.3 Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 23/112 (20%) Frame = +1 Query: 106 YWETPKCKIQSHMHRSISPHQRTRMTEI*TQ----SSLEWLADDGGVPEDLVAELPWLLG 273 YWE CKI M I H+ +TE T S+ +LA E+++ + G Sbjct: 372 YWEAELCKILEEMREEI--HRHMDITEDLTNKARGSNKSFLA---AANEEILESIRAKKG 426 Query: 274 GVDLV-------------------LPRRRQQLEVLHQASERDADDGQREDDP 372 +D V + R++ E Q+ E+D+DD +DDP Sbjct: 427 DIDNVKSPEETEKDKNETENDSKDAEKNREEFE--DQSLEKDSDDKTPDDDP 476
>COBQ_GLOVI (Q7NJR0) Cobyric acid synthase| Length = 490 Score = 28.1 bits (61), Expect = 5.3 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 9/51 (17%) Frame = +1 Query: 196 QSSLEWLADDGGVPEDLVAELPWL---------LGGVDLVLPRRRQQLEVL 321 Q L+WLA GVP +V LPWL +G D R++ QLE++ Sbjct: 206 QPGLDWLAQYTGVP--VVGVLPWLEMALPEEDSMGLFDRRGARKQAQLEIV 254
>FAD6C_SPIOL (P48629) Omega-6 fatty acid desaturase, chloroplast precursor (EC| 1.14.19.-) Length = 447 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/66 (25%), Positives = 31/66 (46%) Frame = +3 Query: 3 SQEVLHHIANYLEIYNIDASNEDQ*PNTKEKLNLLLGNTKMQNTESHA*IDLPASAYAHD 182 S + HHI+ + YN+ A+N+ N E LN N ++ T + + + +D Sbjct: 365 SVHIPHHISPKIPSYNLRAANQSLNENWGEYLNKPKSNWRLMRT-------IMTTCHIYD 417 Query: 183 RDLNSI 200 +D N + Sbjct: 418 KDGNYV 423
>SULU_CAEEL (P46549) Serine/threonine-protein kinase SULU (EC 2.7.11.1)| (Protein kinase 18) Length = 982 Score = 27.7 bits (60), Expect = 7.0 Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 1/105 (0%) Frame = +1 Query: 40 KFTTSTPQMKTNSPTPKKN*TYYWETPKCKIQS-HMHRSISPHQRTRMTEI*TQSSLEWL 216 K + + QMK S K Y E K +++S +M RS M E+ + Sbjct: 614 KNSQNQQQMKLYSAQQLKEYKYNKEAQKTRLRSLNMPRST---YENAMKEVKADLNRVKD 670 Query: 217 ADDGGVPEDLVAELPWLLGGVDLVLPRRRQQLEVLHQASERDADD 351 A + E L AEL D ++ RRQQL LHQ E+ D+ Sbjct: 671 ARENDFDEKLRAELE------DEIVRYRRQQLSNLHQLEEQLDDE 709
>AREA_PENCH (Q01582) Nitrogen regulatory protein areA (Nitrogen regulator nre)| Length = 725 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +1 Query: 286 VLPRRRQQLEVLHQASERDADDGQREDDP 372 V PRR+++LE SE DADD + P Sbjct: 654 VAPRRQRRLEKAPAGSEPDADDSPKSAAP 682 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,978,281 Number of Sequences: 219361 Number of extensions: 1062603 Number of successful extensions: 3123 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 3032 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3120 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 1386249648 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
