ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart56c09 |
|---|---|
| Clone Library Name | barley_pub |
>CAMT1_ARATH (Q9C9W3) Putative caffeoyl-CoA O-methyltransferase At1g67980 (EC| 2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase) (CCoAMT) (CCoAOMT) Length = 232 Score = 49.7 bits (117), Expect = 2e-06 Identities = 21/36 (58%), Positives = 29/36 (80%) Frame = -2 Query: 370 FSAALRDLNAKLAADPRIEVCQLAIADGVTICRRVV 263 + AAL + N KLA DPR+EV Q++I DG+T+CRR+V Sbjct: 197 YRAALIEFNKKLALDPRVEVSQISIGDGITLCRRLV 232
>CAMT_SOLTU (Q8H9B6) Caffeoyl-CoA O-methyltransferase (EC 2.1.1.104)| (Trans-caffeoyl-CoA 3-O-methyltransferase) (CCoAMT) (CCoAOMT) Length = 242 Score = 49.3 bits (116), Expect = 2e-06 Identities = 19/29 (65%), Positives = 25/29 (86%) Frame = -2 Query: 352 DLNAKLAADPRIEVCQLAIADGVTICRRV 266 +LN LAADPRIE+CQL + DG+T+CRR+ Sbjct: 213 ELNKALAADPRIEICQLPVGDGITLCRRI 241
>CAMT4_ARATH (O49499) Probable caffeoyl-CoA O-methyltransferase At4g34050 (EC| 2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase) (CCoAMT) (CCoAOMT) Length = 259 Score = 48.1 bits (113), Expect = 5e-06 Identities = 19/29 (65%), Positives = 24/29 (82%) Frame = -2 Query: 352 DLNAKLAADPRIEVCQLAIADGVTICRRV 266 +LN LAADPRIE+C L + DG+TICRR+ Sbjct: 230 ELNKALAADPRIEICMLPVGDGITICRRI 258
>CAMT_PETCR (P28034) Caffeoyl-CoA O-methyltransferase (EC 2.1.1.104)| (Trans-caffeoyl-CoA 3-O-methyltransferase) (CCOAMT) (CCOAOMT) Length = 241 Score = 47.8 bits (112), Expect = 7e-06 Identities = 19/29 (65%), Positives = 24/29 (82%) Frame = -2 Query: 352 DLNAKLAADPRIEVCQLAIADGVTICRRV 266 +LN LAADPRIE+C L + DGVT+CRR+ Sbjct: 212 ELNKALAADPRIEICMLPVGDGVTLCRRI 240
>CAMT_POPTM (Q43095) Caffeoyl-CoA O-methyltransferase (EC 2.1.1.104)| (Trans-caffeoyl-CoA 3-O-methyltransferase) (CCoAMT) (CCoAOMT) Length = 247 Score = 47.4 bits (111), Expect = 9e-06 Identities = 18/29 (62%), Positives = 24/29 (82%) Frame = -2 Query: 352 DLNAKLAADPRIEVCQLAIADGVTICRRV 266 +LN LAADPRIE+C L + DG+T+CRR+ Sbjct: 218 ELNKALAADPRIEICMLPVGDGITLCRRI 246
>CAMT_EUCGU (O04854) Caffeoyl-CoA O-methyltransferase (EC 2.1.1.104)| (Trans-caffeoyl-CoA 3-O-methyltransferase) (CCoAMT) (CCoAOMT) Length = 249 Score = 47.4 bits (111), Expect = 9e-06 Identities = 18/29 (62%), Positives = 24/29 (82%) Frame = -2 Query: 352 DLNAKLAADPRIEVCQLAIADGVTICRRV 266 +LN LAADPRIE+C L + DG+T+CRR+ Sbjct: 217 ELNKALAADPRIEICMLPVGDGITLCRRI 245
>CAMT6_TOBAC (Q42945) Caffeoyl-CoA O-methyltransferase 6 (EC 2.1.1.104)| (Trans-caffeoyl-CoA 3-O-methyltransferase 6) (CCoAMT-6) (CCoAOMT-6) Length = 247 Score = 47.4 bits (111), Expect = 9e-06 Identities = 18/29 (62%), Positives = 24/29 (82%) Frame = -2 Query: 352 DLNAKLAADPRIEVCQLAIADGVTICRRV 266 +LN LAADPRIE+C L + DG+T+CRR+ Sbjct: 218 ELNKALAADPRIEICMLPVGDGITLCRRI 246
>CAMT2_POPTR (O65922) Caffeoyl-CoA O-methyltransferase 2 (EC 2.1.1.104)| (Trans-caffeoyl-CoA 3-O-methyltransferase 2) (CCoAMT-2) (CCoAOMT-2) Length = 247 Score = 47.4 bits (111), Expect = 9e-06 Identities = 18/29 (62%), Positives = 24/29 (82%) Frame = -2 Query: 352 DLNAKLAADPRIEVCQLAIADGVTICRRV 266 +LN LAADPRIE+C L + DG+T+CRR+ Sbjct: 218 ELNKALAADPRIEICMLPVGDGITLCRRI 246
>CAMT1_POPTR (O65862) Caffeoyl-CoA O-methyltransferase 1 (EC 2.1.1.104)| (Trans-caffeoyl-CoA 3-O-methyltransferase 1) (CCoAMT-1) (CCoAOMT-1) Length = 247 Score = 47.4 bits (111), Expect = 9e-06 Identities = 18/29 (62%), Positives = 24/29 (82%) Frame = -2 Query: 352 DLNAKLAADPRIEVCQLAIADGVTICRRV 266 +LN LAADPRIE+C L + DG+T+CRR+ Sbjct: 218 ELNKALAADPRIEICMLPVGDGITLCRRI 246
>CAMT_ZINEL (Q41720) Caffeoyl-CoA O-methyltransferase (EC 2.1.1.104)| (Trans-caffeoyl-CoA 3-O-methyltransferase) (CCoAMT) (CCoAOMT) Length = 245 Score = 47.4 bits (111), Expect = 9e-06 Identities = 17/29 (58%), Positives = 24/29 (82%) Frame = -2 Query: 352 DLNAKLAADPRIEVCQLAIADGVTICRRV 266 +LN LA DPR+E+CQL + DG+T+CRR+ Sbjct: 216 ELNKALAVDPRVEICQLPVGDGITLCRRI 244
>CAMT1_EUCGL (O81185) Caffeoyl-CoA O-methyltransferase 1 (EC 2.1.1.104)| (Trans-caffeoyl-CoA 3-O-methyltransferase 1) (CCoAMT-1) (CCoAOMT-1) Length = 246 Score = 47.4 bits (111), Expect = 9e-06 Identities = 18/29 (62%), Positives = 24/29 (82%) Frame = -2 Query: 352 DLNAKLAADPRIEVCQLAIADGVTICRRV 266 +LN LAADPRIE+C L + DG+T+CRR+ Sbjct: 217 ELNKALAADPRIEICMLPVGDGITLCRRI 245
>CAMT5_TOBAC (O04899) Caffeoyl-CoA O-methyltransferase 5 (EC 2.1.1.104)| (Trans-caffeoyl-CoA 3-O-methyltransferase 5) (CCoAMT-5) (CCoAOMT-5) Length = 240 Score = 47.4 bits (111), Expect = 9e-06 Identities = 18/29 (62%), Positives = 24/29 (82%) Frame = -2 Query: 352 DLNAKLAADPRIEVCQLAIADGVTICRRV 266 +LN LAADPRIE+C L + DG+T+CRR+ Sbjct: 211 ELNKALAADPRIEICMLPVGDGITLCRRI 239
>CAMT_MEDSA (Q40313) Caffeoyl-CoA O-methyltransferase (EC 2.1.1.104)| (Trans-caffeoyl-CoA 3-O-methyltransferase) (CCoAMT) (CCoAOMT) Length = 247 Score = 46.6 bits (109), Expect = 1e-05 Identities = 18/29 (62%), Positives = 23/29 (79%) Frame = -2 Query: 352 DLNAKLAADPRIEVCQLAIADGVTICRRV 266 +LN LA DPRIE+C L + DG+TICRR+ Sbjct: 218 ELNKALAVDPRIEICMLPVGDGITICRRI 246
>CAMT_MESCR (O65162) Caffeoyl-CoA O-methyltransferase (EC 2.1.1.104)| (Trans-caffeoyl-CoA 3-O-methyltransferase) (CCoAMT) (CCoAOMT) Length = 254 Score = 46.6 bits (109), Expect = 1e-05 Identities = 16/29 (55%), Positives = 24/29 (82%) Frame = -2 Query: 352 DLNAKLAADPRIEVCQLAIADGVTICRRV 266 + N +AADPR+E+CQL + DG+T+CRR+ Sbjct: 225 EFNKAIAADPRVEICQLPVGDGITLCRRI 253
>CAMT_VITVI (Q43237) Caffeoyl-CoA O-methyltransferase (EC 2.1.1.104)| (Trans-caffeoyl-CoA 3-O-methyltransferase) (CCOAMT) (CCOAOMT) Length = 242 Score = 46.6 bits (109), Expect = 1e-05 Identities = 18/29 (62%), Positives = 24/29 (82%) Frame = -2 Query: 352 DLNAKLAADPRIEVCQLAIADGVTICRRV 266 +LN LAADPRIE+C L + DG+T+CRR+ Sbjct: 213 ELNKALAADPRIEICMLPVGDGITLCRRL 241
>CAMT2_MAIZE (Q9XGD5) Caffeoyl-CoA O-methyltransferase 2 (EC 2.1.1.104)| (Trans-caffeoyl-CoA 3-O-methyltransferase 2) (CCoAMT-2) (CCoAOMT-2) Length = 264 Score = 46.6 bits (109), Expect = 1e-05 Identities = 19/28 (67%), Positives = 24/28 (85%) Frame = -2 Query: 349 LNAKLAADPRIEVCQLAIADGVTICRRV 266 LN+ LAAD R+E+CQL + DGVT+CRRV Sbjct: 236 LNSALAADDRVEICQLPVGDGVTLCRRV 263
>CAMT4_TOBAC (O24151) Caffeoyl-CoA O-methyltransferase 4 (EC 2.1.1.104)| (Trans-caffeoyl-CoA 3-O-methyltransferase 4) (CCoAMT-4) (CCoAOMT-4) Length = 242 Score = 46.2 bits (108), Expect = 2e-05 Identities = 18/29 (62%), Positives = 24/29 (82%) Frame = -2 Query: 352 DLNAKLAADPRIEVCQLAIADGVTICRRV 266 +LN LAAD RIE+CQL + DG+T+CRR+ Sbjct: 213 ELNKALAADSRIEICQLPVGDGITLCRRI 241
>CAMT3_TOBAC (O24150) Caffeoyl-CoA O-methyltransferase 3 (EC 2.1.1.104)| (Trans-caffeoyl-CoA 3-O-methyltransferase 3) (CCoAMT-3) (CCoAOMT-3) Length = 242 Score = 46.2 bits (108), Expect = 2e-05 Identities = 18/29 (62%), Positives = 24/29 (82%) Frame = -2 Query: 352 DLNAKLAADPRIEVCQLAIADGVTICRRV 266 +LN LAAD RIE+CQL + DG+T+CRR+ Sbjct: 213 ELNKALAADSRIEICQLPVGDGITLCRRI 241
>CAMT2_TOBAC (O24149) Caffeoyl-CoA O-methyltransferase 2 (EC 2.1.1.104)| (Trans-caffeoyl-CoA 3-O-methyltransferase 2) (CCoAMT-2) (CCoAOMT-2) Length = 242 Score = 46.2 bits (108), Expect = 2e-05 Identities = 18/29 (62%), Positives = 24/29 (82%) Frame = -2 Query: 352 DLNAKLAADPRIEVCQLAIADGVTICRRV 266 +LN LAAD RIE+CQL + DG+T+CRR+ Sbjct: 213 ELNKALAADSRIEICQLPVGDGITLCRRI 241
>CAMT1_TOBAC (O24144) Caffeoyl-CoA O-methyltransferase 1 (EC 2.1.1.104)| (Trans-caffeoyl-CoA 3-O-methyltransferase 1) (CCoAMT-1) (CCoAOMT-1) Length = 239 Score = 46.2 bits (108), Expect = 2e-05 Identities = 18/29 (62%), Positives = 24/29 (82%) Frame = -2 Query: 352 DLNAKLAADPRIEVCQLAIADGVTICRRV 266 +LN LAAD RIE+CQL + DG+T+CRR+ Sbjct: 210 ELNKALAADSRIEICQLPVGDGITLCRRI 238
>CAMT2_EUCGL (Q9SWB8) Caffeoyl-CoA O-methyltransferase 2 (EC 2.1.1.104)| (Trans-caffeoyl-CoA 3-O-methyltransferase 2) (CCoAMT-2) (CCoAOMT-2) Length = 247 Score = 45.8 bits (107), Expect = 3e-05 Identities = 17/29 (58%), Positives = 23/29 (79%) Frame = -2 Query: 352 DLNAKLAADPRIEVCQLAIADGVTICRRV 266 +LN LA DPR+E+C L + DG+T+CRRV Sbjct: 218 ELNKALAVDPRVEICMLPVGDGITLCRRV 246
>CAMT1_MAIZE (Q9XGD6) Caffeoyl-CoA O-methyltransferase 1 (EC 2.1.1.104)| (Trans-caffeoyl-CoA 3-O-methyltransferase 1) (CCoAMT-1) (CCoAOMT-1) Length = 258 Score = 45.8 bits (107), Expect = 3e-05 Identities = 19/28 (67%), Positives = 23/28 (82%) Frame = -2 Query: 349 LNAKLAADPRIEVCQLAIADGVTICRRV 266 LN LAAD R+E+CQL + DGVT+CRRV Sbjct: 230 LNKALAADDRVEICQLPVGDGVTLCRRV 257
>CAMT2_ARATH (Q9C9W4) Probable caffeoyl-CoA O-methyltransferase At1g67990 (EC| 2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase) (CCoAMT) (CCoAOMT) Length = 232 Score = 43.9 bits (102), Expect = 1e-04 Identities = 17/36 (47%), Positives = 27/36 (75%) Frame = -2 Query: 370 FSAALRDLNAKLAADPRIEVCQLAIADGVTICRRVV 263 + AL + N LA DPR+E+ Q++I DG+T+CRR++ Sbjct: 197 YREALLEFNKILARDPRVEIAQISIGDGLTLCRRLI 232
>CAMT_PINTA (Q9ZTT5) Caffeoyl-CoA O-methyltransferase (EC 2.1.1.104)| (Trans-caffeoyl-CoA 3-O-methyltransferase) (CCoAMT) (CCoAOMT) Length = 259 Score = 43.5 bits (101), Expect = 1e-04 Identities = 18/29 (62%), Positives = 23/29 (79%) Frame = -2 Query: 352 DLNAKLAADPRIEVCQLAIADGVTICRRV 266 +LN LA DPRIE+ Q+ + DGVT+CRRV Sbjct: 230 ELNKALAVDPRIEISQIPVLDGVTLCRRV 258
>CAMT3_ARATH (Q9C5D7) Probable caffeoyl-CoA O-methyltransferase At4g26220 (EC| 2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase) (CCoAMT) (CCoAOMT) Length = 232 Score = 42.0 bits (97), Expect = 4e-04 Identities = 17/32 (53%), Positives = 25/32 (78%) Frame = -2 Query: 361 ALRDLNAKLAADPRIEVCQLAIADGVTICRRV 266 A +LN KL+AD R+++ Q A+ DG+TICRR+ Sbjct: 200 ATLELNKKLSADQRVQISQAALGDGITICRRL 231
>CAMT_CITNA (Q9SLP8) Caffeoyl-CoA O-methyltransferase (EC 2.1.1.104)| (Trans-caffeoyl-CoA 3-O-methyltransferase) (CCoAMT) (CCoAOMT) Length = 232 Score = 38.5 bits (88), Expect = 0.004 Identities = 15/29 (51%), Positives = 21/29 (72%) Frame = -2 Query: 352 DLNAKLAADPRIEVCQLAIADGVTICRRV 266 +L LA DPRIE+C L + DG+T+ RR+ Sbjct: 203 ELIKALAVDPRIEICMLPVGDGITLSRRI 231
>CAMT_POPKI (P93711) Caffeoyl-CoA O-methyltransferase (EC 2.1.1.104)| (Trans-caffeoyl-CoA 3-O-methyltransferase) (CCoAMT) (CCoAOMT) Length = 235 Score = 37.4 bits (85), Expect = 0.009 Identities = 14/31 (45%), Positives = 24/31 (77%) Frame = -2 Query: 358 LRDLNAKLAADPRIEVCQLAIADGVTICRRV 266 + + N L++D R+E+ Q++I DGVT+CRR+ Sbjct: 204 IMEFNKLLSSDLRVEISQISIGDGVTLCRRL 234
>CAMT_STELP (Q43161) Caffeoyl-CoA O-methyltransferase (EC 2.1.1.104)| (Trans-caffeoyl-CoA 3-O-methyltransferase) (CCoAMT) (CCoAOMT) Length = 241 Score = 35.0 bits (79), Expect = 0.044 Identities = 14/28 (50%), Positives = 19/28 (67%) Frame = -2 Query: 349 LNAKLAADPRIEVCQLAIADGVTICRRV 266 LN L +D RI++ L + DG+T CRRV Sbjct: 213 LNEILGSDARIDIAHLPVGDGITFCRRV 240
>MDMC_STRMY (Q00719) O-methyltransferase mdmC (EC 2.1.1.-)| Length = 221 Score = 33.9 bits (76), Expect = 0.099 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = -2 Query: 367 SAALRDLNAKLAADPRIEVCQLAIADGVTICRR 269 + A+R LN L D R+++ L +ADG+T+ RR Sbjct: 187 TVAVRTLNDLLRDDERVDIALLTVADGITLARR 219
>SMS2_CAEEL (Q20735) Putative phosphatidylcholine:ceramide| cholinephosphotransferase 2 (EC 2.7.-.-) (Sphingomyelin synthase 2) Length = 335 Score = 28.9 bits (63), Expect = 3.2 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = -3 Query: 204 DFVPYQPLPLINCIIFPCQRW 142 D VP QPLP + +I P QRW Sbjct: 82 DVVPRQPLPDLTFMIIPQQRW 102
>LSHB_HORSE (P08751) Lutropin/choriogonadotropin beta chain precursor| (LSH-B/CG-B) (Lutenizing hormone beta subunit) Length = 169 Score = 28.5 bits (62), Expect = 4.2 Identities = 21/60 (35%), Positives = 29/60 (48%) Frame = -2 Query: 355 RDLNAKLAADPRIEVCQLAIADGVTICRRVV*TGVRSGPA*SIGIPRAWSRFRSLPAASL 176 R +NA LAA+ E C + I +IC + VR PA IP+ +R L AS+ Sbjct: 30 RPINATLAAEK--EACPICITFTTSICAGYCPSMVRVMPAALPAIPQPVCTYRELRFASI 87
>LSHB_EQUBU (O46641) Lutropin/choriogonadotropin beta chain precursor| (LSH-B/CG-B) (Lutenizing hormone beta subunit) Length = 169 Score = 27.7 bits (60), Expect = 7.1 Identities = 21/60 (35%), Positives = 29/60 (48%) Frame = -2 Query: 355 RDLNAKLAADPRIEVCQLAIADGVTICRRVV*TGVRSGPA*SIGIPRAWSRFRSLPAASL 176 R +NA LAA+ E C + I +IC + VR PA IP+ +R L AS+ Sbjct: 30 RPINATLAAEK--EACPICITFTTSICAGYCPSMVRVMPAALPPIPQPVCTYRELRFASI 87
>AGO1_ARATH (O04379) Argonaute protein| Length = 1048 Score = 27.7 bits (60), Expect = 7.1 Identities = 17/40 (42%), Positives = 24/40 (60%) Frame = +2 Query: 56 EPLLPLLSSNFESKKVLLKTRNHQMLHASQRWQGKIIQLI 175 EP+LP +S+ E + +LKTR H S+ QGK I L+ Sbjct: 640 EPVLPPVSARPEQVEKVLKTRYHDA--TSKLSQGKEIDLL 677
>RUMB_VIBCH (Q9KL20) 23S rRNA (uracil-5-)-methyltransferase rumB (EC 2.1.1.-)| (23S rRNA(M-5-U747)-methyltransferase) Length = 375 Score = 27.3 bits (59), Expect = 9.3 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%) Frame = -3 Query: 231 ASGSPVRGVDFVPYQPLPLINCIIF--PCQRWLA*SI*WFRV 112 A+ +P+ G++ QPL L+ C ++ P Q LA W R+ Sbjct: 66 AAHAPILGIEDAQGQPLSLVTCPLYPQPMQELLAYLENWIRI 107
>EXO1_MOUSE (Q9QZ11) Exonuclease 1 (EC 3.1.-.-) (mExo1) (Exonuclease I)| Length = 837 Score = 27.3 bits (59), Expect = 9.3 Identities = 15/49 (30%), Positives = 24/49 (48%) Frame = +2 Query: 44 ST*VEPLLPLLSSNFESKKVLLKTRNHQMLHASQRWQGKIIQLIKGSGW 190 +T ++PL+P S K ++TR H + Q KI +L K G+ Sbjct: 743 TTKIKPLVPARVSGLSKKSGSMQTRKHHDVENKPGLQTKISELWKNFGF 791 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,371,651 Number of Sequences: 219361 Number of extensions: 688805 Number of successful extensions: 1400 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 1391 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1400 length of database: 80,573,946 effective HSP length: 99 effective length of database: 58,857,207 effective search space used: 1412572968 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
