Clone Name | rbart56c06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | STO_ARATH (Q96288) Salt-tolerance protein | 52 | 8e-07 | 2 | STH_ARATH (Q9SID1) Salt tolerance-like protein | 49 | 8e-06 | 3 | HTXD_PSEST (O69063) Hypophosphite import ATP-binding protein htx... | 31 | 1.8 | 4 | PYRK_THEMA (Q9X1X4) Probable dihydroorotate dehydrogenase electr... | 30 | 4.0 | 5 | MTCH1_HUMAN (Q9NZJ7) Mitochondrial carrier homolog 1 (Presenilin... | 28 | 8.9 | 6 | IF2_CAUCR (Q9AC25) Translation initiation factor IF-2 | 28 | 8.9 |
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>STO_ARATH (Q96288) Salt-tolerance protein| Length = 248 Score = 52.0 bits (123), Expect = 8e-07 Identities = 42/107 (39%), Positives = 50/107 (46%), Gaps = 4/107 (3%) Frame = -1 Query: 415 PQDWAVDELLQFSDY*SSDKLHKDSTLGFKELEWFTADMELFHDHAPKGGRAAMEVPEFF 236 P WAVD+ FSD S+DK LG EL+WF +DM F D A EVPE Sbjct: 149 PLPWAVDDFFHFSDIESTDK-KGQLDLGAGELDWF-SDMGFFGDQINDKALPAAEVPELS 206 Query: 235 ASQAADDAAYY-RQSRVAATAGVRQSKKARVEIA---DDEDFFIVPD 107 S +Y +S V+ KK R E DDE+ FIVPD Sbjct: 207 VSHLGHVHSYKPMKSNVS-------HKKPRFETRYDDDDEEHFIVPD 246
>STH_ARATH (Q9SID1) Salt tolerance-like protein| Length = 238 Score = 48.5 bits (114), Expect = 8e-06 Identities = 36/102 (35%), Positives = 49/102 (48%), Gaps = 2/102 (1%) Frame = -1 Query: 406 WAVDELLQFSDY*SSDKLHKDSTLGFKELEWFTADMELFHDHAPKGGRAAMEVPEFFASQ 227 WA DE +SD S+K + LG EL+W A+M LF D + EVPE S Sbjct: 143 WATDEFFSYSDLDCSNKEKEQLDLG--ELDWL-AEMGLFGDQPDQEALPVAEVPELSFSH 199 Query: 226 AADDAAYYRQSRVAATAGVRQSKKARVEIA--DDEDFFIVPD 107 A +Y R + +KK R+E D+E+ F+VPD Sbjct: 200 LAHAHSYNRPMKSNV-----PNKKQRLEYRYDDEEEHFLVPD 236
>HTXD_PSEST (O69063) Hypophosphite import ATP-binding protein htxD (EC 3.6.3.-)| Length = 341 Score = 30.8 bits (68), Expect = 1.8 Identities = 17/40 (42%), Positives = 20/40 (50%) Frame = -3 Query: 368 VQRQAAQGLDSRLQGAGVVHRRHGALPRPRAQGRQGGHGG 249 +QRQ + G D RRHGA+ R R R G HGG Sbjct: 299 LQRQTSAGAD----------RRHGAVVRDRTTHRNGPHGG 328
>PYRK_THEMA (Q9X1X4) Probable dihydroorotate dehydrogenase electron transfer| subunit Length = 282 Score = 29.6 bits (65), Expect = 4.0 Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 15/84 (17%) Frame = +2 Query: 260 RPAALGRVVVEELHVGGEPLQLLEAESRV---LVQLVAGLVVRELQEL-----------V 397 + A G+ VV LH GE + L A+++ L ++V +V + EL V Sbjct: 31 KEARPGQFVVIRLHEKGERIPLTVADTKPEEGLFRMVVKVVGKTTHELSLKKEGDTILDV 90 Query: 398 HGPVLR-QELRRRGNLLSAGGGLG 466 GP+ E+ GN+L GGG+G Sbjct: 91 VGPLGNPSEIENYGNVLLVGGGVG 114
>MTCH1_HUMAN (Q9NZJ7) Mitochondrial carrier homolog 1 (Presenilin-associated| protein) Length = 389 Score = 28.5 bits (62), Expect = 8.9 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 4/40 (10%) Frame = -3 Query: 356 AAQGLDSRLQGAGVVHRRHGALPRPRAQ----GRQGGHGG 249 AA G+++R + HR H PRP AQ GG GG Sbjct: 32 AAAGVEARARDPPPAHRAHPRHPRPAAQPSARRMDGGSGG 71
>IF2_CAUCR (Q9AC25) Translation initiation factor IF-2| Length = 1009 Score = 28.5 bits (62), Expect = 8.9 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = -3 Query: 308 RRHGALPRPRAQGRQGGHGGT 246 RRHG P PR QGG GG+ Sbjct: 67 RRHGEAPAPRPAPPQGGGGGS 87 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,134,100 Number of Sequences: 219361 Number of extensions: 785580 Number of successful extensions: 2892 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2777 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2881 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)