ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart56c06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009289.1| Triticum aestivum clone wlm0.pk0023.h3:fis, full ... 694 0.0
2gb|AY109441.1| Zea mays CL359_1 mRNA sequence 176 4e-41
3ref|XM_466630.1| Oryza sativa (japonica cultivar-group), mRNA 121 2e-24
4ref|XM_506858.1| PREDICTED Oryza sativa (japonica cultivar-group... 121 2e-24
5dbj|AK104293.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 2e-24
6dbj|AK061044.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 2e-24
7dbj|AB001885.1| Oryza sativa (japonica cultivar-group) mRNA for ... 121 2e-24
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
9dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
10dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
11gb|AC136221.2| Oryza sativa (japonica cultivar-group) chromosome... 78 3e-11
12dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
13ref|XM_473004.1| Oryza sativa (japonica cultivar-group), predic... 56 1e-04
14emb|AL662938.3|OSJN00138 Oryza sativa genomic DNA, chromosome 4,... 56 1e-04
15dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
16dbj|AK061664.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
17emb|AL512542.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 56 1e-04
18emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4,... 56 1e-04
19dbj|AB001883.1| Oryza sativa (japonica cultivar-group) mRNA for ... 56 1e-04
20gb|AY658379.1| Synthetic construct Peudomonas aeruginosa clone F... 44 0.40
21gb|AE004613.1| Pseudomonas aeruginosa PAO1, section 174 of 529 o... 44 0.40
22gb|AY107218.1| Zea mays PCO140184 mRNA sequence 44 0.40
23gb|AF044261.1|AF044261 Pseudomonas aeruginosa XqhA (xqhA) and Ac... 44 0.40
24gb|AC079843.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
25gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
26gb|AC099734.5| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
27gb|AE012515.1| Xanthomonas campestris pv. campestris str. ATCC 3... 42 1.6
28gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 42 1.6
29dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
30emb|AJ489222.1|IPA489222 Infectious pancreatic necrosis virus ge... 42 1.6
31gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
32ref|NM_180350.1| Arabidopsis thaliana unknown protein AT3G52060 ... 40 6.3
33ref|NM_115065.2| Arabidopsis thaliana unknown protein AT3G52060 ... 40 6.3
34ref|XM_478696.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
35gb|BC056159.1| Homo sapiens EPH receptor B6, mRNA (cDNA clone IM... 40 6.3
36gb|BC051028.1| Homo sapiens EPH receptor B6, mRNA (cDNA clone IM... 40 6.3
37gb|BC015495.1| Homo sapiens EPH receptor B6, mRNA (cDNA clone IM... 40 6.3
38gb|AY386151.1| Diplostomum baeri clone RUBRE2 internal transcrib... 40 6.3
39gb|AY386150.1| Diplostomum baeri clone ROBRE2 internal transcrib... 40 6.3
40gb|AC109596.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
41ref|NM_004445.2| Homo sapiens EPH receptor B6 (EPHB6), mRNA 40 6.3
42emb|CR405685.8| Zebrafish DNA sequence from clone DKEY-164B12 in... 40 6.3
43gb|AC121577.3| Mus musculus BAC clone RP23-244N5 from 15, comple... 40 6.3
44ref|XM_546176.2| PREDICTED: Canis familiaris similar to zinc fin... 40 6.3
45gb|AY280502.1| Homo sapiens EPHB6 (EPHB6) gene, complete cds 40 6.3
46gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 6.3
47gb|AF360303.1| Arabidopsis thaliana unknown protein (At3g52060) ... 40 6.3
48emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 6.3
49ref|NM_204574.1| Gallus gallus filamin (LOC395261), mRNA 40 6.3
50emb|AL049711.3|ATF4F15 Arabidopsis thaliana DNA chromosome 3, BA... 40 6.3
51gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 6.3
52gb|AC104597.3| Homo sapiens BAC clone RP11-114L10 from 7, comple... 40 6.3
53dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
54emb|BX822642.1|CNS0A70S Arabidopsis thaliana Full-length cDNA Co... 40 6.3
55emb|BX823655.1|CNS0A6KW Arabidopsis thaliana Full-length cDNA Co... 40 6.3
56emb|BX823336.1|CNS0A6LY Arabidopsis thaliana Full-length cDNA Co... 40 6.3
57gb|BT002508.1| Arabidopsis thaliana Unknown protein (At3g52060) ... 40 6.3
58dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
59dbj|AK100986.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
60gb|AF107256.1|AF107256 Homo sapiens chromosome 7q36 BAC C3, comp... 40 6.3
61gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.3
62emb|AL954645.7| Zebrafish DNA sequence from clone CH211-234B4, c... 40 6.3
63dbj|AB023437.1| Gallus gallus mRNA for filamin, partial cds 40 6.3
64dbj|AB056474.1| Gallus gallus mRNA for filamin, complete cds 40 6.3 
>gb|BT009289.1| Triticum aestivum clone wlm0.pk0023.h3:fis, full insert mRNA
           sequence
          Length = 1225

 Score =  694 bits (350), Expect = 0.0
 Identities = 436/465 (93%), Gaps = 6/465 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   gacagaacactagcttttgtacacagctcctctctgtatacaacaacactgcaaaatcac 60
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 938 gacagaagactagcttttgtacacagctcctctctgtatacaacaacactgcaaaatcac 879

                                                                       
Query: 61  acgaggaagtaccagaacctaaacctaggagtatcgcttagccaagatcaggtacgataa 120
           ||||||| |||| || | |||      |||| |||||||||||||||||||| ||||| |
Sbjct: 878 acgaggaggtactagcatcta------ggagcatcgcttagccaagatcaggcacgatga 825

                                                                       
Query: 121 agaagtcctcgtcatcggcgatctcgacgcgggccttcttgctctggcgcacgccggcgg 180
           ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 agaagtcctcgtcgtcggggatctcgacgcgggccttcttgctctggcgcacgccggcgg 765

                                                                       
Query: 181 tggcggcgactctgctctgcctgtagtaggccgcgtcgtctgccgcctgcgaggcaaaga 240
           ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 764 tggcggcgactctgctcggcctgtagtagcccgcgtcgtctgccgcctgcgaggcgaaga 705

                                                                       
Query: 241 actcgggtacctccatggccgccctgccgcccttgggcgcgtggtcgtggaagagctcca 300
           ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 actcggggacctccatggtcgccctgccgcccttgggcgcgtggtcgtggaagagctcca 645

                                                                       
Query: 301 tgtcggcggtgaaccactccagctccttgaagccgagagtcgagtccttgtgcagcttgt 360
           |||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 644 tgtccgcggtgaaccactccagctccttgaaggcgagaggcgagtccttgtgcagcttgt 585

                                                                       
Query: 361 cgctggactagtagtccgagaactgcaggagctcgtccacggcccagtcctgcggcagga 420
           ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 584 cgctggactcgtagtccgagaactgcaggagctcgtcgacggcccagtcctgcggcagga 525

                                                        
Query: 421 actgcggcggcgagggaacctgctgagcgctggcggcgggctggg 465
           |||||||||||||||| |||||||| |||| ||||||||||||||
Sbjct: 524 actgcggcggcgaggggacctgctgcgcgcgggcggcgggctggg 480
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>gb|AY109441.1| Zea mays CL359_1 mRNA sequence
          Length = 1551

 Score =  176 bits (89), Expect = 4e-41
 Identities = 142/159 (89%), Gaps = 3/159 (1%)
 Strand = Plus / Minus

                                                                       
Query: 285 tcgtggaagagctccatgtcggcggtgaaccactccagctccttgaagccgagagtcgag 344
           ||||||||||| || ||||   ||||||||||||||||||||||||| ||||| |  || 
Sbjct: 661 tcgtggaagaggtcgatgt---cggtgaaccactccagctccttgaacccgagcggggac 605

                                                                       
Query: 345 tccttgtgcagcttgtcgctggactagtagtccgagaactgcaggagctcgtccacggcc 404
           ||||||||||||||||||||||||| | |||| |||||||||||||||||||| ||||||
Sbjct: 604 tccttgtgcagcttgtcgctggactcgcagtcggagaactgcaggagctcgtcgacggcc 545

                                                  
Query: 405 cagtcctgcggcaggaactgcggcggcgagggaacctgc 443
           ||| |||| ||||||||||||||||||||||| ||||||
Sbjct: 544 cagccctgtggcaggaactgcggcggcgagggcacctgc 506
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>ref|XM_466630.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1065

 Score =  121 bits (61), Expect = 2e-24
 Identities = 143/170 (84%), Gaps = 9/170 (5%)
 Strand = Plus / Minus

                                                                       
Query: 266 gccgcccttgggcgcgtggtcgtggaagagctccatgtcggcggtgaaccactccagctc 325
           ||||||||||||||| |||| |||||| || || |||||||||   ||||||||||||||
Sbjct: 739 gccgcccttgggcgcctggttgtggaacaggtcgatgtcggcg---aaccactccagctc 683

                                                                       
Query: 326 cttgaagccgagagtcg------agtccttgtgcagcttgtcgctggactagtagtccga 379
           || ||| ||||| | ||      | ||||| ||||||||||||| || || |||||| ||
Sbjct: 682 ctggaacccgagcggcggcgacgactccttctgcagcttgtcgccggtctcgtagtcgga 623

                                                             
Query: 380 gaactgcaggagctcgtccacggcccagtcctgcggcaggaactgcggcg 429
           |||||| ||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 622 gaactggaggagctcgtcgacggcccagccctgcggcaggaactgcggcg 573



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 126 tcctcgtcatcggcgatctcgacgcgggccttcttgctctggcg 169
           |||||||| |||| || |||||||||||||||||||||||||||
Sbjct: 909 tcctcgtcgtcggggagctcgacgcgggccttcttgctctggcg 866



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 199 gcctgtagtaggccgcgtcgtctgccgcctgcgaggcaaagaactcgggtacctcc 254
           |||||||||| ||| ||||||  ||||||||||| || |||| |||||| ||||||
Sbjct: 818 gcctgtagtacgccacgtcgttggccgcctgcgaagcgaagagctcggggacctcc 763
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>ref|XM_506858.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1058_F07.25
           mRNA
          Length = 1078

 Score =  121 bits (61), Expect = 2e-24
 Identities = 143/170 (84%), Gaps = 9/170 (5%)
 Strand = Plus / Minus

                                                                       
Query: 266 gccgcccttgggcgcgtggtcgtggaagagctccatgtcggcggtgaaccactccagctc 325
           ||||||||||||||| |||| |||||| || || |||||||||   ||||||||||||||
Sbjct: 739 gccgcccttgggcgcctggttgtggaacaggtcgatgtcggcg---aaccactccagctc 683

                                                                       
Query: 326 cttgaagccgagagtcg------agtccttgtgcagcttgtcgctggactagtagtccga 379
           || ||| ||||| | ||      | ||||| ||||||||||||| || || |||||| ||
Sbjct: 682 ctggaacccgagcggcggcgacgactccttctgcagcttgtcgccggtctcgtagtcgga 623

                                                             
Query: 380 gaactgcaggagctcgtccacggcccagtcctgcggcaggaactgcggcg 429
           |||||| ||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 622 gaactggaggagctcgtcgacggcccagccctgcggcaggaactgcggcg 573



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 126 tcctcgtcatcggcgatctcgacgcgggccttcttgctctggcg 169
           |||||||| |||| || |||||||||||||||||||||||||||
Sbjct: 909 tcctcgtcgtcggggagctcgacgcgggccttcttgctctggcg 866



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 199 gcctgtagtaggccgcgtcgtctgccgcctgcgaggcaaagaactcgggtacctcc 254
           |||||||||| ||| ||||||  ||||||||||| || |||| |||||| ||||||
Sbjct: 818 gcctgtagtacgccacgtcgttggccgcctgcgaagcgaagagctcggggacctcc 763
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>dbj|AK104293.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-G06, full
           insert sequence
          Length = 1065

 Score =  121 bits (61), Expect = 2e-24
 Identities = 143/170 (84%), Gaps = 9/170 (5%)
 Strand = Plus / Minus

                                                                       
Query: 266 gccgcccttgggcgcgtggtcgtggaagagctccatgtcggcggtgaaccactccagctc 325
           ||||||||||||||| |||| |||||| || || |||||||||   ||||||||||||||
Sbjct: 739 gccgcccttgggcgcctggttgtggaacaggtcgatgtcggcg---aaccactccagctc 683

                                                                       
Query: 326 cttgaagccgagagtcg------agtccttgtgcagcttgtcgctggactagtagtccga 379
           || ||| ||||| | ||      | ||||| ||||||||||||| || || |||||| ||
Sbjct: 682 ctggaacccgagcggcggcgacgactccttctgcagcttgtcgccggtctcgtagtcgga 623

                                                             
Query: 380 gaactgcaggagctcgtccacggcccagtcctgcggcaggaactgcggcg 429
           |||||| ||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 622 gaactggaggagctcgtcgacggcccagccctgcggcaggaactgcggcg 573



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 126 tcctcgtcatcggcgatctcgacgcgggccttcttgctctggcg 169
           |||||||| |||| || |||||||||||||||||||||||||||
Sbjct: 909 tcctcgtcgtcggggagctcgacgcgggccttcttgctctggcg 866



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 199 gcctgtagtaggccgcgtcgtctgccgcctgcgaggcaaagaactcgggtacctcc 254
           |||||||||| ||| ||||||  ||||||||||| || |||| |||||| ||||||
Sbjct: 818 gcctgtagtacgccacgtcgttggccgcctgcgaagcgaagagctcggggacctcc 763
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>dbj|AK061044.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-E01, full
           insert sequence
          Length = 1078

 Score =  121 bits (61), Expect = 2e-24
 Identities = 143/170 (84%), Gaps = 9/170 (5%)
 Strand = Plus / Minus

                                                                       
Query: 266 gccgcccttgggcgcgtggtcgtggaagagctccatgtcggcggtgaaccactccagctc 325
           ||||||||||||||| |||| |||||| || || |||||||||   ||||||||||||||
Sbjct: 739 gccgcccttgggcgcctggttgtggaacaggtcgatgtcggcg---aaccactccagctc 683

                                                                       
Query: 326 cttgaagccgagagtcg------agtccttgtgcagcttgtcgctggactagtagtccga 379
           || ||| ||||| | ||      | ||||| ||||||||||||| || || |||||| ||
Sbjct: 682 ctggaacccgagcggcggcgacgactccttctgcagcttgtcgccggtctcgtagtcgga 623

                                                             
Query: 380 gaactgcaggagctcgtccacggcccagtcctgcggcaggaactgcggcg 429
           |||||| ||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 622 gaactggaggagctcgtcgacggcccagccctgcggcaggaactgcggcg 573



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 126 tcctcgtcatcggcgatctcgacgcgggccttcttgctctggcg 169
           |||||||| |||| || |||||||||||||||||||||||||||
Sbjct: 909 tcctcgtcgtcggggagctcgacgcgggccttcttgctctggcg 866



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 199 gcctgtagtaggccgcgtcgtctgccgcctgcgaggcaaagaactcgggtacctcc 254
           |||||||||| ||| ||||||  ||||||||||| || |||| |||||| ||||||
Sbjct: 818 gcctgtagtacgccacgtcgttggccgcctgcgaagcgaagagctcggggacctcc 763
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>dbj|AB001885.1| Oryza sativa (japonica cultivar-group) mRNA for zinc finger
           protein, complete cds, clone:R1577
          Length = 1197

 Score =  121 bits (61), Expect = 2e-24
 Identities = 143/170 (84%), Gaps = 9/170 (5%)
 Strand = Plus / Minus

                                                                       
Query: 266 gccgcccttgggcgcgtggtcgtggaagagctccatgtcggcggtgaaccactccagctc 325
           ||||||||||||||| |||| |||||| || || |||||||||   ||||||||||||||
Sbjct: 734 gccgcccttgggcgcctggttgtggaacaggtcgatgtcggcg---aaccactccagctc 678

                                                                       
Query: 326 cttgaagccgagagtcg------agtccttgtgcagcttgtcgctggactagtagtccga 379
           || ||| ||||| | ||      | ||||| ||||||||||||| || || |||||| ||
Sbjct: 677 ctggaacccgagcggcggcgacgactccttctgcagcttgtcgccggtctcgtagtcgga 618

                                                             
Query: 380 gaactgcaggagctcgtccacggcccagtcctgcggcaggaactgcggcg 429
           |||||| ||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 617 gaactggaggagctcgtcgacggcccagccctgcggcaggaactgcggcg 568



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 126 tcctcgtcatcggcgatctcgacgcgggccttcttgctctggcg 169
           |||||||| |||| || |||||||||||||||||||||||||||
Sbjct: 904 tcctcgtcgtcggggagctcgacgcgggccttcttgctctggcg 861



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 199 gcctgtagtaggccgcgtcgtctgccgcctgcgaggcaaagaactcgggtacctcc 254
           |||||||||| ||| ||||||  ||||||||||| || |||| |||||| ||||||
Sbjct: 813 gcctgtagtacgccacgtcgttggccgcctgcgaagcgaagagctcggggacctcc 758
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 67/74 (90%)
 Strand = Plus / Minus

                                                                            
Query: 356      cttgtcgctggactagtagtccgagaactgcaggagctcgtccacggcccagtcctgcgg 415
                |||||||| || || |||||| |||||||| ||||||||||| ||||||||| |||||||
Sbjct: 23779290 cttgtcgccggtctcgtagtcggagaactggaggagctcgtcgacggcccagccctgcgg 23779231

                              
Query: 416      caggaactgcggcg 429
                ||||||||||||||
Sbjct: 23779230 caggaactgcggcg 23779217



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                            
Query: 126      tcctcgtcatcggcgatctcgacgcgggccttcttgctctggcg 169
                |||||||| |||| || |||||||||||||||||||||||||||
Sbjct: 23779657 tcctcgtcgtcggggagctcgacgcgggccttcttgctctggcg 23779614



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 62/72 (86%), Gaps = 3/72 (4%)
 Strand = Plus / Minus

                                                                            
Query: 266      gccgcccttgggcgcgtggtcgtggaagagctccatgtcggcggtgaaccactccagctc 325
                ||||||||||||||| |||| |||||| || || ||||||||   |||||||||||||||
Sbjct: 23779487 gccgcccttgggcgcctggttgtggaacaggtcgatgtcggc---gaaccactccagctc 23779431

                            
Query: 326      cttgaagccgag 337
                || ||| |||||
Sbjct: 23779430 ctggaacccgag 23779419



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                        
Query: 199      gcctgtagtaggccgcgtcgtctgccgcctgcgaggcaaagaactcgggtacctcc 254
                |||||||||| ||| ||||||  ||||||||||| || |||| |||||| ||||||
Sbjct: 23779566 gcctgtagtacgccacgtcgttggccgcctgcgaagcgaagagctcggggacctcc 23779511
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>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
           BAC clone:OSJNBa0030C08
          Length = 163423

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 67/74 (90%)
 Strand = Plus / Minus

                                                                       
Query: 356 cttgtcgctggactagtagtccgagaactgcaggagctcgtccacggcccagtcctgcgg 415
           |||||||| || || |||||| |||||||| ||||||||||| ||||||||| |||||||
Sbjct: 956 cttgtcgccggtctcgtagtcggagaactggaggagctcgtcgacggcccagccctgcgg 897

                         
Query: 416 caggaactgcggcg 429
           ||||||||||||||
Sbjct: 896 caggaactgcggcg 883



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                        
Query: 126  tcctcgtcatcggcgatctcgacgcgggccttcttgctctggcg 169
            |||||||| |||| || |||||||||||||||||||||||||||
Sbjct: 1323 tcctcgtcgtcggggagctcgacgcgggccttcttgctctggcg 1280



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 62/72 (86%), Gaps = 3/72 (4%)
 Strand = Plus / Minus

                                                                        
Query: 266  gccgcccttgggcgcgtggtcgtggaagagctccatgtcggcggtgaaccactccagctc 325
            ||||||||||||||| |||| |||||| || || ||||||||   |||||||||||||||
Sbjct: 1153 gccgcccttgggcgcctggttgtggaacaggtcgatgtcggc---gaaccactccagctc 1097

                        
Query: 326  cttgaagccgag 337
            || ||| |||||
Sbjct: 1096 ctggaacccgag 1085



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 199  gcctgtagtaggccgcgtcgtctgccgcctgcgaggcaaagaactcgggtacctcc 254
            |||||||||| ||| ||||||  ||||||||||| || |||| |||||| ||||||
Sbjct: 1232 gcctgtagtacgccacgtcgttggccgcctgcgaagcgaagagctcggggacctcc 1177
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>dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1058_F07
          Length = 95841

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 67/74 (90%)
 Strand = Plus / Minus

                                                                         
Query: 356   cttgtcgctggactagtagtccgagaactgcaggagctcgtccacggcccagtcctgcgg 415
             |||||||| || || |||||| |||||||| ||||||||||| ||||||||| |||||||
Sbjct: 89874 cttgtcgccggtctcgtagtcggagaactggaggagctcgtcgacggcccagccctgcgg 89815

                           
Query: 416   caggaactgcggcg 429
             ||||||||||||||
Sbjct: 89814 caggaactgcggcg 89801



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                         
Query: 126   tcctcgtcatcggcgatctcgacgcgggccttcttgctctggcg 169
             |||||||| |||| || |||||||||||||||||||||||||||
Sbjct: 90241 tcctcgtcgtcggggagctcgacgcgggccttcttgctctggcg 90198



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 62/72 (86%), Gaps = 3/72 (4%)
 Strand = Plus / Minus

                                                                         
Query: 266   gccgcccttgggcgcgtggtcgtggaagagctccatgtcggcggtgaaccactccagctc 325
             ||||||||||||||| |||| |||||| || || ||||||||   |||||||||||||||
Sbjct: 90071 gccgcccttgggcgcctggttgtggaacaggtcgatgtcggc---gaaccactccagctc 90015

                         
Query: 326   cttgaagccgag 337
             || ||| |||||
Sbjct: 90014 ctggaacccgag 90003



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                     
Query: 199   gcctgtagtaggccgcgtcgtctgccgcctgcgaggcaaagaactcgggtacctcc 254
             |||||||||| ||| ||||||  ||||||||||| || |||| |||||| ||||||
Sbjct: 90150 gcctgtagtacgccacgtcgttggccgcctgcgaagcgaagagctcggggacctcc 90095
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>gb|AC136221.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0077J17, complete sequence
          Length = 141598

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 67/75 (89%), Gaps = 1/75 (1%)
 Strand = Plus / Plus

                                                                         
Query: 371   gtagtccgagaactgcaggagctcgtccacggcccagtcctgcggcaggaactgcggcgg 430
             |||||| |||||||| ||||||||||| ||||||||| |||| |||||||||||| ||||
Sbjct: 11986 gtagtcggagaactggaggagctcgtcgacggcccagccctgtggcaggaactgc-gcgg 12044

                            
Query: 431   cgagggaacctgctg 445
             ||||||  |||||||
Sbjct: 12045 cgagggcgcctgctg 12059
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 67/75 (89%), Gaps = 1/75 (1%)
 Strand = Plus / Plus

                                                                            
Query: 371      gtagtccgagaactgcaggagctcgtccacggcccagtcctgcggcaggaactgcggcgg 430
                |||||| |||||||| ||||||||||| ||||||||| |||| |||||||||||| ||||
Sbjct: 16371549 gtagtcggagaactggaggagctcgtcgacggcccagccctgtggcaggaactgc-gcgg 16371607

                               
Query: 431      cgagggaacctgctg 445
                ||||||  |||||||
Sbjct: 16371608 cgagggcgcctgctg 16371622



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 169      gcacgccggcggtggcggcg 188
                ||||||||||||||||||||
Sbjct: 25936576 gcacgccggcggtggcggcg 25936557
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>ref|XM_473004.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 774

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 356 cttgtcgctggactagtagtccgagaactgcaggagctcgtccacggcccag 407
           |||||||||||||| |||||| |||| ||||||||| || || |||||||||
Sbjct: 534 cttgtcgctggactcgtagtcggagagctgcaggagatcctcgacggcccag 483



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 102 ccaagatcaggtacgataaagaagtcctcgtc 133
           ||||||||||| ||||| ||||||||||||||
Sbjct: 770 ccaagatcaggaacgatgaagaagtcctcgtc 739
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>emb|AL662938.3|OSJN00138 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ990528_30,
             complete sequence
          Length = 88547

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                 
Query: 356   cttgtcgctggactagtagtccgagaactgcaggagctcgtccacggcccag 407
             |||||||||||||| |||||| |||| ||||||||| || || |||||||||
Sbjct: 78932 cttgtcgctggactcgtagtcggagagctgcaggagatcctcgacggcccag 78983



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 102   ccaagatcaggtacgataaagaagtcctcgtc 133
             ||||||||||| ||||| ||||||||||||||
Sbjct: 78601 ccaagatcaggaacgatgaagaagtcctcgtc 78632
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                    
Query: 356      cttgtcgctggactagtagtccgagaactgcaggagctcgtccacggcccag 407
                |||||||||||||| |||||| |||| ||||||||| || || |||||||||
Sbjct: 24623787 cttgtcgctggactcgtagtcggagagctgcaggagatcctcgacggcccag 24623838



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                                
Query: 102      ccaagatcaggtacgataaagaagtcctcgtc 133
                ||||||||||| ||||| ||||||||||||||
Sbjct: 24623456 ccaagatcaggaacgatgaagaagtcctcgtc 24623487
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>dbj|AK061664.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-E12, full
           insert sequence
          Length = 765

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 356 cttgtcgctggactagtagtccgagaactgcaggagctcgtccacggcccag 407
           |||||||||||||| |||||| |||| ||||||||| || || |||||||||
Sbjct: 315 cttgtcgctggactcgtagtcggagagctgcaggagatcctcgacggcccag 264



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 102 ccaagatcaggtacgataaagaagtcctcgtc 133
           ||||||||||| ||||| ||||||||||||||
Sbjct: 551 ccaagatcaggaacgatgaagaagtcctcgtc 520
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>emb|AL512542.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0522A01, complete
             sequence
          Length = 97077

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                 
Query: 356   cttgtcgctggactagtagtccgagaactgcaggagctcgtccacggcccag 407
             |||||||||||||| |||||| |||| ||||||||| || || |||||||||
Sbjct: 62578 cttgtcgctggactcgtagtcggagagctgcaggagatcctcgacggcccag 62629



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 102   ccaagatcaggtacgataaagaagtcctcgtc 133
             ||||||||||| ||||| ||||||||||||||
Sbjct: 62247 ccaagatcaggaacgatgaagaagtcctcgtc 62278
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>emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0091E11,
             complete sequence
          Length = 133856

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                 
Query: 356   cttgtcgctggactagtagtccgagaactgcaggagctcgtccacggcccag 407
             |||||||||||||| |||||| |||| ||||||||| || || |||||||||
Sbjct: 13310 cttgtcgctggactcgtagtcggagagctgcaggagatcctcgacggcccag 13361



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 102   ccaagatcaggtacgataaagaagtcctcgtc 133
             ||||||||||| ||||| ||||||||||||||
Sbjct: 12979 ccaagatcaggaacgatgaagaagtcctcgtc 13010
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>dbj|AB001883.1| Oryza sativa (japonica cultivar-group) mRNA for zinc finger
           protein, complete cds, clone:E10707
          Length = 987

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 356 cttgtcgctggactagtagtccgagaactgcaggagctcgtccacggcccag 407
           |||||||||||||| |||||| |||| ||||||||| || || |||||||||
Sbjct: 556 cttgtcgctggactcgtagtcggagagctgcaggagatcctcgacggcccag 505



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 102 ccaagatcaggtacgataaagaagtcctcgtc 133
           ||||||||||| ||||| ||||||||||||||
Sbjct: 792 ccaagatcaggaacgatgaagaagtcctcgtc 761
to top
>gb|AY658379.1| Synthetic construct Peudomonas aeruginosa clone FLH031449.01F
           PA1869 gene, partial cds
          Length = 240

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 129 tcgtcatcggcgatctcgacgc 150
           ||||||||||||||||||||||
Sbjct: 176 tcgtcatcggcgatctcgacgc 155
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>gb|AE004613.1| Pseudomonas aeruginosa PAO1, section 174 of 529 of the complete
            genome
          Length = 20342

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 129  tcgtcatcggcgatctcgacgc 150
            ||||||||||||||||||||||
Sbjct: 3438 tcgtcatcggcgatctcgacgc 3417
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>gb|AY107218.1| Zea mays PCO140184 mRNA sequence
          Length = 548

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 100 agccaagatcaggtacgataaagaagtcctcgtc 133
           ||||||||||||| ||||| ||| ||||||||||
Sbjct: 248 agccaagatcaggaacgatgaagtagtcctcgtc 215



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 311 gaaccactccagctccttga 330
           ||||||||||||||||||||
Sbjct: 61  gaaccactccagctccttga 42
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>gb|AF044261.1|AF044261 Pseudomonas aeruginosa XqhA (xqhA) and AcpP-like protein (acpP-like)
            genes, complete cds
          Length = 2900

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 129  tcgtcatcggcgatctcgacgc 150
            ||||||||||||||||||||||
Sbjct: 2786 tcgtcatcggcgatctcgacgc 2765
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>gb|AC079843.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0013J21, complete sequence
          Length = 155290

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 384   tgcaggagctcgtccacggcc 404
             |||||||||||||||||||||
Sbjct: 31773 tgcaggagctcgtccacggcc 31793
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>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
               Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 384     tgcaggagctcgtccacggcc 404
               |||||||||||||||||||||
Sbjct: 2053633 tgcaggagctcgtccacggcc 2053653
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>gb|AC099734.5| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0004A06,
              complete sequence
          Length = 153510

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 384    tgcaggagctcgtccacggcc 404
              |||||||||||||||||||||
Sbjct: 144362 tgcaggagctcgtccacggcc 144382
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>gb|AE012515.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 423
            of 460 of the complete genome
          Length = 10679

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 163  tctggcgcacgccggcggtggcggc 187
            |||||||||||||| ||||||||||
Sbjct: 8529 tctggcgcacgccgccggtggcggc 8505
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 163     tctggcgcacgccggcggtggcggc 187
               |||||||||||||| ||||||||||
Sbjct: 4755895 tctggcgcacgccgccggtggcggc 4755871
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 384     tgcaggagctcgtccacggcc 404
               |||||||||||||||||||||
Sbjct: 2053633 tgcaggagctcgtccacggcc 2053653
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>emb|AJ489222.1|IPA489222 Infectious pancreatic necrosis virus gene for polyprotein, isolate
            1146, genomic RNA
          Length = 2919

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 126  tcctcgtcatcggcgatctcg 146
            |||||||||||||||||||||
Sbjct: 1988 tcctcgtcatcggcgatctcg 1968
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 384     tgcaggagctcgtccacggcc 404
               |||||||||||||||||||||
Sbjct: 2053584 tgcaggagctcgtccacggcc 2053604
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>ref|NM_180350.1| Arabidopsis thaliana unknown protein AT3G52060 transcript variant
           AT3G52060.2 mRNA, complete cds
          Length = 1754

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 30  ctctctgtatacaacaacac 49
           ||||||||||||||||||||
Sbjct: 259 ctctctgtatacaacaacac 240
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>ref|NM_115065.2| Arabidopsis thaliana unknown protein AT3G52060 transcript variant
           AT3G52060.1 mRNA, complete cds
          Length = 1668

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 30  ctctctgtatacaacaacac 49
           ||||||||||||||||||||
Sbjct: 259 ctctctgtatacaacaacac 240
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>ref|XM_478696.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1173

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 gccggcggtggcggcgactc 192
           ||||||||||||||||||||
Sbjct: 54  gccggcggtggcggcgactc 73
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>gb|BC056159.1| Homo sapiens EPH receptor B6, mRNA (cDNA clone IMAGE:6204336)
          Length = 3900

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 136 cggcgatctcgacgcgggcc 155
           ||||||||||||||||||||
Sbjct: 1   cggcgatctcgacgcgggcc 20
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>gb|BC051028.1| Homo sapiens EPH receptor B6, mRNA (cDNA clone IMAGE:5167011), with
           apparent retained intron
          Length = 4460

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 136 cggcgatctcgacgcgggcc 155
           ||||||||||||||||||||
Sbjct: 20  cggcgatctcgacgcgggcc 39
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>gb|BC015495.1| Homo sapiens EPH receptor B6, mRNA (cDNA clone IMAGE:3903473), with
           apparent retained intron
          Length = 490

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 136 cggcgatctcgacgcgggcc 155
           ||||||||||||||||||||
Sbjct: 37  cggcgatctcgacgcgggcc 56
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>gb|AY386151.1| Diplostomum baeri clone RUBRE2 internal transcribed spacer 1,
           partial sequence
          Length = 650

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 362 gctggactagtagtccgaga 381
           ||||||||||||||||||||
Sbjct: 377 gctggactagtagtccgaga 358
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>gb|AY386150.1| Diplostomum baeri clone ROBRE2 internal transcribed spacer 1,
           partial sequence
          Length = 649

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 362 gctggactagtagtccgaga 381
           ||||||||||||||||||||
Sbjct: 376 gctggactagtagtccgaga 357
to top
>gb|AC109596.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1593_C11,
             complete sequence
          Length = 112065

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 169   gcacgccggcggtggcggcg 188
             ||||||||||||||||||||
Sbjct: 39704 gcacgccggcggtggcggcg 39685
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>ref|NM_004445.2| Homo sapiens EPH receptor B6 (EPHB6), mRNA
          Length = 4059

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 136 cggcgatctcgacgcgggcc 155
           ||||||||||||||||||||
Sbjct: 114 cggcgatctcgacgcgggcc 133
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>emb|CR405685.8| Zebrafish DNA sequence from clone DKEY-164B12 in linkage group 25,
             complete sequence
          Length = 116349

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    ctgtatacaacaacactgca 53
             ||||||||||||||||||||
Sbjct: 20513 ctgtatacaacaacactgca 20494
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>gb|AC121577.3| Mus musculus BAC clone RP23-244N5 from 15, complete sequence
          Length = 200103

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 42     aacaacactgcaaaatcaca 61
              ||||||||||||||||||||
Sbjct: 108280 aacaacactgcaaaatcaca 108261
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>ref|XM_546176.2| PREDICTED: Canis familiaris similar to zinc finger protein 503
            (LOC489058), mRNA
          Length = 2339

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 411  tgcggcaggaactgcggcgg 430
            ||||||||||||||||||||
Sbjct: 1466 tgcggcaggaactgcggcgg 1447
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>gb|AY280502.1| Homo sapiens EPHB6 (EPHB6) gene, complete cds
          Length = 19655

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 136  cggcgatctcgacgcgggcc 155
            ||||||||||||||||||||
Sbjct: 3032 cggcgatctcgacgcgggcc 3051
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 165     tggcgcacgccggcggtggcggcg 188
               |||||||||||||||| |||||||
Sbjct: 1510623 tggcgcacgccggcggcggcggcg 1510646
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>gb|AF360303.1| Arabidopsis thaliana unknown protein (At3g52060) mRNA, complete
          cds
          Length = 1495

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 30 ctctctgtatacaacaacac 49
          ||||||||||||||||||||
Sbjct: 71 ctctctgtatacaacaacac 52
to top
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 129     tcgtcatcggcgatctcgac 148
               ||||||||||||||||||||
Sbjct: 1123868 tcgtcatcggcgatctcgac 1123849
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>ref|NM_204574.1| Gallus gallus filamin (LOC395261), mRNA
          Length = 8110

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 243  tcgggtacctccatggccgc 262
            ||||||||||||||||||||
Sbjct: 6469 tcgggtacctccatggccgc 6488
to top
>emb|AL049711.3|ATF4F15 Arabidopsis thaliana DNA chromosome 3, BAC clone F4F15
          Length = 123209

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    ctctctgtatacaacaacac 49
             ||||||||||||||||||||
Sbjct: 61061 ctctctgtatacaacaacac 61080
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 416     caggaactgcggcggcgagg 435
               ||||||||||||||||||||
Sbjct: 3896504 caggaactgcggcggcgagg 3896523



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 127     cctcgtcatcggcgatctcg 146
               ||||||||||||||||||||
Sbjct: 1068485 cctcgtcatcggcgatctcg 1068466
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>gb|AC104597.3| Homo sapiens BAC clone RP11-114L10 from 7, complete sequence
          Length = 161425

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    cggcgatctcgacgcgggcc 155
              ||||||||||||||||||||
Sbjct: 107643 cggcgatctcgacgcgggcc 107662
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 173      gccggcggtggcggcgactc 192
                ||||||||||||||||||||
Sbjct: 22280414 gccggcggtggcggcgactc 22280433
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>emb|BX822642.1|CNS0A70S Arabidopsis thaliana Full-length cDNA Complete sequence from
          clone GSLTFB55ZG05 of Flowers and buds of strain col-0
          of Arabidopsis thaliana (thale cress)
          Length = 1433

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 30 ctctctgtatacaacaacac 49
          ||||||||||||||||||||
Sbjct: 56 ctctctgtatacaacaacac 37
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>emb|BX823655.1|CNS0A6KW Arabidopsis thaliana Full-length cDNA Complete sequence from
          clone GSLTLS62ZF06 of Adult vegetative tissue of strain
          col-0 of Arabidopsis thaliana (thale cress)
          Length = 1393

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 30 ctctctgtatacaacaacac 49
          ||||||||||||||||||||
Sbjct: 20 ctctctgtatacaacaacac 1
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>emb|BX823336.1|CNS0A6LY Arabidopsis thaliana Full-length cDNA Complete sequence from
          clone GSLTLS24ZD08 of Adult vegetative tissue of strain
          col-0 of Arabidopsis thaliana (thale cress)
          Length = 1408

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 30 ctctctgtatacaacaacac 49
          ||||||||||||||||||||
Sbjct: 22 ctctctgtatacaacaacac 3
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>gb|BT002508.1| Arabidopsis thaliana Unknown protein (At3g52060) mRNA, complete
          cds
          Length = 1478

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 30 ctctctgtatacaacaacac 49
          ||||||||||||||||||||
Sbjct: 75 ctctctgtatacaacaacac 56
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>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0567H04
          Length = 181420

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   gccggcggtggcggcgactc 192
             ||||||||||||||||||||
Sbjct: 85660 gccggcggtggcggcgactc 85679
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>dbj|AK100986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145E05, full
           insert sequence
          Length = 1173

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 gccggcggtggcggcgactc 192
           ||||||||||||||||||||
Sbjct: 54  gccggcggtggcggcgactc 73
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>gb|AF107256.1|AF107256 Homo sapiens chromosome 7q36 BAC C3, complete sequence
          Length = 46343

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   cggcgatctcgacgcgggcc 155
             ||||||||||||||||||||
Sbjct: 31983 cggcgatctcgacgcgggcc 32002
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 371     gtagtccgagaactgcagga 390
               ||||||||||||||||||||
Sbjct: 1237453 gtagtccgagaactgcagga 1237472
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>emb|AL954645.7| Zebrafish DNA sequence from clone CH211-234B4, complete sequence
          Length = 182141

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     ctgtatacaacaacactgca 53
              ||||||||||||||||||||
Sbjct: 128451 ctgtatacaacaacactgca 128470
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>dbj|AB023437.1| Gallus gallus mRNA for filamin, partial cds
          Length = 1819

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 243  tcgggtacctccatggccgc 262
            ||||||||||||||||||||
Sbjct: 1420 tcgggtacctccatggccgc 1439
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>dbj|AB056474.1| Gallus gallus mRNA for filamin, complete cds
          Length = 8110

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 243  tcgggtacctccatggccgc 262
            ||||||||||||||||||||
Sbjct: 6469 tcgggtacctccatggccgc 6488


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,454,013
Number of Sequences: 3902068
Number of extensions: 3454013
Number of successful extensions: 75979
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74862
Number of HSP's gapped (non-prelim): 1109
length of query: 466
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 444
effective length of database: 17,147,199,772
effective search space: 7613356698768
effective search space used: 7613356698768
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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