ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart56b07 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ864780.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7B10 Length = 281 Score = 115 bits (58), Expect = 1e-22 Identities = 93/106 (87%), Gaps = 9/106 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 108 gataaaagtagtactcttttatagctaactattgtacaagctagctataaggtgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| |||||||| |||||| Sbjct: 48 aagatggcttatagccagcagttggctatactattaaccttgctct 3
>emb|AJ864778.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ003T7C01 Length = 281 Score = 115 bits (58), Expect = 1e-22 Identities = 93/106 (87%), Gaps = 9/106 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 108 gataaaagtagtactcttttatagctaactattgtacaagctagctataaggtgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| |||||||| |||||| Sbjct: 48 aagatggcttatagccagcagttggctatactattaaccttgctct 3
>emb|AJ864767.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7D08 Length = 280 Score = 111 bits (56), Expect = 2e-21 Identities = 94/108 (87%), Gaps = 9/108 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 108 gataaaagtagtactcttttatagctaactattgtacaagctagctataagatgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctctta 99 |||||||||||||||||||||| |||||||| |||||||| Sbjct: 48 aagactgcttatagccagcagttggctatactattaaccttgctctta 1
>emb|AJ864765.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7B11 Length = 281 Score = 111 bits (56), Expect = 2e-21 Identities = 94/108 (87%), Gaps = 9/108 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 108 gataaaagtagtactcttttatagctaactattgtacaagctagctataagatgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctctta 99 |||||||||||||||||||||| |||||||| |||||||| Sbjct: 48 aagactgcttatagccagcagttggctatactattaaccttgctctta 1
>emb|AJ864764.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7B09 Length = 260 Score = 111 bits (56), Expect = 2e-21 Identities = 94/108 (87%), Gaps = 9/108 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 108 gataaaagtagtactcttttatagctaactattgtacaagctagctataagatgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctctta 99 |||||| ||||||||||||||| ||||||||||||||||| Sbjct: 48 aagactgcttatagtcagcagttggctatactattaaccatgctctta 1
>emb|AJ864747.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7C10 Length = 253 Score = 111 bits (56), Expect = 2e-21 Identities = 94/108 (87%), Gaps = 9/108 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 108 gataaaaatagtactcttttatagctaactattgtacaagctagctataagatgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctctta 99 |||||||||||||||||||||| |||||||| |||||||| Sbjct: 48 aagaatgcttatagccagcagttggctatactattaaccttgctctta 1
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 111 bits (56), Expect = 2e-21 Identities = 94/108 (87%), Gaps = 9/108 (8%) Strand = Plus / Plus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| |||||||||||||||||||||||||||| |||||||||||||| | ||||| Sbjct: 16727 gataaaagtagtactcttttatagctaactattgtataagctagctataagatgggctat 16786 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctctta 99 |||||||||||||||||||||| ||||||||||||||||| Sbjct: 16787 aagactgcttatagccagcagttggctatactattaaccatgctctta 16834
>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness locus region Length = 129099 Score = 109 bits (55), Expect = 8e-21 Identities = 84/95 (88%), Gaps = 9/95 (9%) Strand = Plus / Minus Query: 12 tactcttttatagctaactattgtacaagctagctataaggtaggcta---------tta 62 |||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 30986 tactcttttatagctaactattgtacaagctagctataaggtgggctataagactactta 30927 Query: 63 tagccagcagttggctatagtattaaccatgctct 97 ||||||||||||||||||| ||||||||||||||| Sbjct: 30926 tagccagcagttggctatactattaaccatgctct 30892 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 2 ataaaattagtactcttttatagctaactattgtacaagctagctataag 51 |||||| ||||| ||||||||| ||||||||| ||||||||||||||||| Sbjct: 4857 ataaaaatagtattcttttataactaactattatacaagctagctataag 4808 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 60 ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| ||||||||||||||| Sbjct: 4790 ttatagccagcagttggctatactattaaccatgctct 4753
>emb|AJ864752.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7H12 Length = 282 Score = 109 bits (55), Expect = 8e-21 Identities = 90/103 (87%), Gaps = 9/103 (8%) Strand = Plus / Minus Query: 4 aaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta---- 59 |||| |||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 105 aaaaatagtactcttttatagctaactattgtacaagctagctataaagtgggctataaa 46 Query: 60 -----ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| ||||||||||||||| Sbjct: 45 actgcttatagccagcagttggctatactattaaccatgctct 3
>emb|AJ864781.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7C07 Length = 280 Score = 107 bits (54), Expect = 3e-20 Identities = 92/106 (86%), Gaps = 9/106 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 108 gataaaagtagtactcttttatagctaactattgtacaagctagctataagatgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| |||||||| |||||| Sbjct: 48 aagatggcttatagccagcagttggctatactattaaccttgctct 3
>emb|AJ864779.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7A07 Length = 281 Score = 107 bits (54), Expect = 3e-20 Identities = 92/106 (86%), Gaps = 9/106 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 108 gataaaagtaatactcttttatagctaactattgtacaagctagctataaggtgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| |||||||| |||||| Sbjct: 48 aagatggcttatagccagcagttggctatactattaaccttgctct 3
>emb|AJ864755.1| Hordeum vulgare subsp. spontaneum transposon Talisker, clone SQ003T7E04 Length = 281 Score = 107 bits (54), Expect = 3e-20 Identities = 92/106 (86%), Gaps = 9/106 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| ||||||||||||||||||||||||||||||| |||||| |||||| ||||| Sbjct: 108 gataaaagtagtactcttttatagctaactattgtacaatctagctgtaaggtgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| ||||||||||||||| Sbjct: 48 aagactgcttatagccagcagttggctatactattaaccatgctct 3
>emb|AJ864729.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7G11 Length = 268 Score = 107 bits (54), Expect = 3e-20 Identities = 92/106 (86%), Gaps = 9/106 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| |||||||||||||||||||||||||||||||||||| |||||| | ||||| Sbjct: 108 gataaaagtagtactcttttatagctaactattgtacaagctagttataagatgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| ||||||||||||||| Sbjct: 48 aagactgcttatagccagcagttggctatactattaaccatgctct 3
>dbj|AB058924.1| Hordeum vulgare gene for protein kinase HvPKABA1, complete cds, cultivar:Igri Length = 11684 Score = 107 bits (54), Expect = 3e-20 Identities = 81/89 (91%), Gaps = 2/89 (2%) Strand = Plus / Plus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggctat 60 |||||||||| ||| ||||||||||||||||||||| |||||||||||||| | ||| | Sbjct: 4335 gataaaattaatacacttttatagctaactattgtataagctagctataagatcggc--t 4392 Query: 61 tatagccagcagttggctatagtattaac 89 ||||||||||||||||||||| ||||||| Sbjct: 4393 tatagccagcagttggctatactattaac 4421
>emb|AJ864746.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ003T7B01 Length = 270 Score = 105 bits (53), Expect = 1e-19 Identities = 91/105 (86%), Gaps = 9/105 (8%) Strand = Plus / Minus Query: 4 aaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta---- 59 |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 105 aaaagtagtactcttttatagctaactattgtacaagctagctataagatgggctataag 46 Query: 60 -----ttatagccagcagttggctatagtattaaccatgctctta 99 |||||||||||||||||||||| |||||||| |||||||| Sbjct: 45 actgcttatagccagcagttggctatactattaaccttgctctta 1
>emb|AJ864743.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7D11 Length = 278 Score = 103 bits (52), Expect = 5e-19 Identities = 91/105 (86%), Gaps = 8/105 (7%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| |||||| |||||||||||||||| ||||||||||||||||||| | ||||| Sbjct: 107 gataaaagtagtacacttttatagctaactagtgtacaagctagctataagatgggctat 48 Query: 60 -------ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| ||||||||||||||| Sbjct: 47 aagatgcttatagccagcagttggctatactattaaccatgctct 3
>emb|AJ864731.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ003T7B02 Length = 281 Score = 103 bits (52), Expect = 5e-19 Identities = 93/108 (86%), Gaps = 9/108 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggctat 60 ||||||| |||||||||||||||||||||||||||||||||||| ||||| | |||||| Sbjct: 108 gataaaagtagtactcttttatagctaactattgtacaagctagttataatatgggctat 49 Query: 61 ---------tatagccagcagttggctatagtattaaccatgctctta 99 ||||||||||||||||||||| ||||||||||||||||| Sbjct: 48 aagactgcttatagccagcagttggctatactattaaccatgctctta 1
>emb|AJ864730.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7E12 Length = 281 Score = 103 bits (52), Expect = 5e-19 Identities = 93/108 (86%), Gaps = 9/108 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| ||||||| ||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 108 gataaaagtagtacttttttatagctaactattgtacaagctagctataagatgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctctta 99 ||||||||||||||| |||||| ||||||||||||||||| Sbjct: 48 aagatagcttatagccagcagttcgctatactattaaccatgctctta 1
>emb|AJ864792.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7B07 Length = 281 Score = 99.6 bits (50), Expect = 8e-18 Identities = 91/106 (85%), Gaps = 9/106 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| |||||||||||| ||||||||||||||||||| |||||||||| | ||||| Sbjct: 108 gataaaagtagtactcttttgtagctaactattgtacaagttagctataagatgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| ||||||||||||||| Sbjct: 48 aagactgcttatagccagcagttggctatactattaaccatgctct 3
>emb|AJ864784.1| Hordeum vulgare subsp. spontaneum transposon Talisker, clone SQ003T7D03 Length = 281 Score = 99.6 bits (50), Expect = 8e-18 Identities = 91/106 (85%), Gaps = 9/106 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| |||||||||||||||||| |||||||||||||||||||||||| | ||||| Sbjct: 108 gataaaagtagtactcttttatagctcactattgtacaagctagctataagatgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctct 97 |||| ||||||||||||||||| ||||||||||||||| Sbjct: 48 aagatggcttattgccagcagttggctatactattaaccatgctct 3
>emb|AJ864777.1| Hordeum vulgare subsp. spontaneum transposon Talisker, clone SQ003T7C04 Length = 281 Score = 99.6 bits (50), Expect = 8e-18 Identities = 91/106 (85%), Gaps = 9/106 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 108 gataaaagtagtactcttttgtagctaactattgtacaagctagctataaggtgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctct 97 ||||| |||||| ||||||||| ||||||||||||||| Sbjct: 48 aagatggcttataaccagcatttggctatactattaaccatgctct 3
>emb|AJ864776.1| Hordeum vulgare subsp. spontaneum transposon Talisker, clone SQ003T7B04 Length = 281 Score = 99.6 bits (50), Expect = 8e-18 Identities = 91/106 (85%), Gaps = 9/106 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 108 gataaaagtagtactcttttgtagctaactattgtacaagctagctataaggtgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctct 97 ||||| |||||| ||||||||| ||||||||||||||| Sbjct: 48 aagatggcttataaccagcatttggctatactattaaccatgctct 3
>emb|AJ864775.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7E07 Length = 281 Score = 99.6 bits (50), Expect = 8e-18 Identities = 91/106 (85%), Gaps = 9/106 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 108 gataaaagtagtactcttttgtagctaactattgtacaagctagctataaggtgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctct 97 ||||||||| |||||||||||| |||||||| |||||| Sbjct: 48 aagatggcttatagccaccagttggctatactattaaccttgctct 3
>emb|AJ864774.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7A09 Length = 281 Score = 99.6 bits (50), Expect = 8e-18 Identities = 91/106 (85%), Gaps = 9/106 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 |||||||| ||||||||||| ||||||||||||||| |||||||||||||||| ||||| Sbjct: 108 gataaaatcagtactcttttgtagctaactattgtataagctagctataaggtgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| |||||||| |||||| Sbjct: 48 aagatggcttatagccagcagttggctatactattaaccttgctct 3
>emb|AJ864773.1| Hordeum vulgare subsp. spontaneum transposon Talisker, clone SQ003T7E02 Length = 278 Score = 99.6 bits (50), Expect = 8e-18 Identities = 85/98 (86%), Gaps = 9/98 (9%) Strand = Plus / Minus Query: 9 tagtactcttttatagctaactattgtacaagctagctataaggtaggcta--------- 59 ||||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 100 tagtactcttttatagctaactattgtacaagctagctataagatgggctataagatggc 41 Query: 60 ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| |||||| |||||||| Sbjct: 40 ttatagccagcagttggctatactattaaacatgctct 3
>emb|AJ864766.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7G06 Length = 281 Score = 99.6 bits (50), Expect = 8e-18 Identities = 91/106 (85%), Gaps = 9/106 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 108 gataaaagtagtactcttttatagctaactattgtacaagctagctataagatgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctct 97 ||||||||||||| |||||||| |||||||| |||||| Sbjct: 48 aagactgcttatagccagcaggtggctatactattaaccttgctct 3
>emb|AJ864763.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7G12 Length = 282 Score = 99.6 bits (50), Expect = 8e-18 Identities = 91/106 (85%), Gaps = 9/106 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| ||| ||||||||||| ||||||||||||||||||||||||||| | ||||| Sbjct: 108 gataaaagtaggactcttttataactaactattgtacaagctagctataagatgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| ||||||||||||||| Sbjct: 48 aagactgcttatagccagcagttggctatactattaaccatgctct 3
>emb|AJ864762.1| Hordeum vulgare subsp. spontaneum transposon Talisker, clone SQ003T7D04 Length = 252 Score = 99.6 bits (50), Expect = 8e-18 Identities = 85/98 (86%), Gaps = 9/98 (9%) Strand = Plus / Minus Query: 9 tagtactcttttatagctaactattgtacaagctagctataaggtaggcta--------- 59 ||||||||||||||| ||||||||||||||||||||||||||| | ||||| Sbjct: 100 tagtactcttttataactaactattgtacaagctagctataagatgggctataagactgc 41 Query: 60 ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| ||||||||||||||| Sbjct: 40 ttatagccagcagttggctatactattaaccatgctct 3
>emb|AJ864758.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7F10 Length = 281 Score = 99.6 bits (50), Expect = 8e-18 Identities = 91/106 (85%), Gaps = 9/106 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggctat 60 ||||||| ||||||||||||||||||||||||| |||||||||||||||| || ||||| Sbjct: 108 gataaaagtagtactcttttatagctaactattatacaagctagctataaagtgagctat 49 Query: 61 ---------tatagccagcagttggctatagtattaaccatgctct 97 ||||||||||||||||||||| ||||||||||||||| Sbjct: 48 aagactgcttatagccagcagttggctatactattaaccatgctct 3
>emb|AJ864744.1| Hordeum vulgare subsp. spontaneum transposon Talisker, clone SQ003T7F03 Length = 281 Score = 99.6 bits (50), Expect = 8e-18 Identities = 91/106 (85%), Gaps = 9/106 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| ||||||| ||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 108 gataaaagtagtacttttttatagctaactattgtacaagctagctataagatgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| |||||||| |||||| Sbjct: 48 aagactccttatagccagcagttggctatactattaaccttgctct 3
>emb|AJ864738.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7F09 Length = 280 Score = 99.6 bits (50), Expect = 8e-18 Identities = 91/106 (85%), Gaps = 9/106 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| |||||||||||||| ||||||| |||||||||||||||||||| | ||||| Sbjct: 108 gataaaagtagtactcttttattgctaactgttgtacaagctagctataagatgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| ||||||||||||||| Sbjct: 48 aagcaggcttatagccagcagttggctatactattaaccatgctct 3
>emb|AJ864737.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7G10 Length = 280 Score = 99.6 bits (50), Expect = 8e-18 Identities = 91/106 (85%), Gaps = 9/106 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| |||||||||||||| ||||||| |||||||||||||||||||| | ||||| Sbjct: 108 gataaaagtagtactcttttattgctaactgttgtacaagctagctataagatgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| ||||||||||||||| Sbjct: 48 aagcaggcttatagccagcagttggctatactattaaccatgctct 3
>emb|AJ864728.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7B12 Length = 287 Score = 99.6 bits (50), Expect = 8e-18 Identities = 85/98 (86%), Gaps = 9/98 (9%) Strand = Plus / Minus Query: 9 tagtactcttttatagctaactattgtacaagctagctataaggtaggctat-------- 60 |||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 100 tagtactcttttatagctaactattgtacaagctagctataaaatgggctataagatagc 41 Query: 61 -tatagccagcagttggctatagtattaaccatgctct 97 ||||||||||||||||||||| ||||||||||||||| Sbjct: 40 ttatagccagcagttggctatactattaaccatgctct 3
>emb|AJ864727.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7B08 Length = 281 Score = 99.6 bits (50), Expect = 8e-18 Identities = 91/106 (85%), Gaps = 9/106 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| |||||||||||| |||||||||||||||||||||||||||||| | ||||| Sbjct: 108 gataaaagtagtactcttttgtagctaactattgtacaagctagctataagatgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| |||||||| |||||| Sbjct: 48 aagattgcttatagccagcagttggctatactattaaccttgctct 3
>emb|AJ864742.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7H10 Length = 281 Score = 93.7 bits (47), Expect = 5e-16 Identities = 50/51 (98%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataag 51 ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108 gataaaagtagtactcttttatagctaactattgtacaagctagctataag 58 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 60 ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| ||||||||||||||| Sbjct: 40 ttatagccagcagttggctatactattaaccatgctct 3
>emb|AJ864787.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7A08 Length = 281 Score = 91.7 bits (46), Expect = 2e-15 Identities = 90/106 (84%), Gaps = 9/106 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| |||||||||| ||||||||||||||||||||||| |||||||| | ||||| Sbjct: 108 gataaaaatagtactcttctatagctaactattgtacaagctggctataagatgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| |||||||| |||||| Sbjct: 48 aagactgcttatagccagcagttggctatactattaaccttgctct 3
>emb|AJ864783.1| Hordeum vulgare subsp. spontaneum transposon Talisker, clone SQ003T7G03 Length = 276 Score = 91.7 bits (46), Expect = 2e-15 Identities = 90/106 (84%), Gaps = 9/106 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| |||||||||| ||||||||||||||||||||| || ||||||| | ||||| Sbjct: 108 gataaaagtagtactcttctatagctaactattgtacaagttaactataagatgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| ||||||||||||||| Sbjct: 48 aagatggcttatagccagcagttggctatactattaaccatgctct 3
>emb|AJ864759.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7E10 Length = 281 Score = 91.7 bits (46), Expect = 2e-15 Identities = 90/106 (84%), Gaps = 9/106 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| || ||||||||||||| | |||||||||||||||||||||||||| ||||| Sbjct: 108 gataaaagtaatactcttttatagttgactattgtacaagctagctataaggtgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctct 97 |||||||| ||||||||||||| ||||||||||||||| Sbjct: 48 aagactgtttatagcccgcagttggctatactattaaccatgctct 3
>emb|AJ864754.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7H09 Length = 282 Score = 91.7 bits (46), Expect = 2e-15 Identities = 90/106 (84%), Gaps = 9/106 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| |||||||||||||||||||| ||||||||||||| ||||||||| ||||| Sbjct: 108 gataaaaatagtactcttttatagctaattattgtacaagctgactataaggtgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctct 97 ||||||| |||||||||||||| ||||||||||||||| Sbjct: 48 aagactgcttatagctagcagttggctatactattaaccatgctct 3
>emb|AJ864749.1| Hordeum vulgare subsp. spontaneum transposon Talisker, clone SQ003_T7_A03 Length = 281 Score = 91.7 bits (46), Expect = 2e-15 Identities = 90/106 (84%), Gaps = 9/106 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| |||||||||||||||||||||||||||||||| ||| |||||| | ||||| Sbjct: 108 gataaaaatagtactcttttatagctaactattgtacaagttagttataagatgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctct 97 ||||||||| |||||||||||| ||||||||||||||| Sbjct: 48 aagactgcttatagccaacagttggctatactattaaccatgctct 3
>emb|AJ864724.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7A10 Length = 281 Score = 91.7 bits (46), Expect = 2e-15 Identities = 90/106 (84%), Gaps = 9/106 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| ||||||||||||| ||||||||||||||||||||||||||||| | ||||| Sbjct: 108 gataaaagtagtactcttttacagctaactattgtacaagctagctataagatgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctct 97 ||||||| |||||||||||||| |||||||| |||||| Sbjct: 48 aagactgcttatagctagcagttggctatactattaaccttgctct 3
>emb|AJ864750.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7C08 Length = 283 Score = 89.7 bits (45), Expect = 8e-15 Identities = 92/108 (85%), Gaps = 11/108 (10%) Strand = Plus / Minus Query: 1 gataaaattagtactctttt--atagctaactattgtacaagctagctataaggtaggct 58 ||||||| |||||||||||| |||||||||||||||||||||| |||||||||| |||| Sbjct: 110 gataaaagtagtactcttttttatagctaactattgtacaagctggctataaggtgggct 51 Query: 59 a---------ttatagccagcagttggctatagtattaaccatgctct 97 | |||||||||||||||||||||| |||||||| |||||| Sbjct: 50 ataatactccttatagccagcagttggctatactattaaccttgctct 3
>emb|AJ864768.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7H11 Length = 280 Score = 87.7 bits (44), Expect = 3e-14 Identities = 92/108 (85%), Gaps = 10/108 (9%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| ||||||| ||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 107 gataaaagtagtact-ttttatagctaactattgtacaagctagctataagatgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctctta 99 |||||||| ||||||||||||| |||||||| |||||||| Sbjct: 48 aagacttcttatagcccgcagttggctatactattaaccttgctctta 1
>emb|AJ864739.1| Hordeum vulgare subsp. spontaneum transposon Talisker, clone SQ003T7E03 Length = 281 Score = 87.7 bits (44), Expect = 3e-14 Identities = 91/108 (84%), Gaps = 9/108 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| |||||||||||||| ||||||| |||||||| ||||||||||| | ||||| Sbjct: 108 gataaaagtagtactcttttattgctaactgttgtacaaactagctataagatgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctctta 99 |||||||||||||||||||||| |||||||| |||||||| Sbjct: 48 aagcaggcttatagccagcagttggctatactattaaccttgctctta 1
>emb|AJ864735.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7G09 Length = 274 Score = 87.7 bits (44), Expect = 3e-14 Identities = 86/99 (86%), Gaps = 2/99 (2%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggctat 60 ||||||| ||||||| ||||||||||||||||| ||||| ||||||||||| | || ||| Sbjct: 101 gataaaagtagtacttttttatagctaactattatacaaactagctataagatgggttat 42 Query: 61 --tatagccagcagttggctatagtattaaccatgctct 97 ||||||| |||||||||||| |||||| |||||||| Sbjct: 41 aagatagccaacagttggctatactattaaacatgctct 3
>emb|AJ864796.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ003T7D02 Length = 268 Score = 85.7 bits (43), Expect = 1e-13 Identities = 83/97 (85%), Gaps = 7/97 (7%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggctat 60 ||||||| ||||| ||||||||||||||||||||||||||| ||||||||| || Sbjct: 92 gataaaaatagtattcttttatagctaactattgtacaagccagctataag-------at 40 Query: 61 tatagccagcagttggctatagtattaaccatgctct 97 |||||||||| |||||||| ||||||||||||||| Sbjct: 39 ggtagccagcagatggctatactattaaccatgctct 3
>emb|AJ864791.1| Hordeum vulgare subsp. spontaneum transposon Talisker, clone SQ003T7F02 Length = 285 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataag 51 ||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 108 gataaaactagtactcttttgtagctaactattgtacaagctagctataag 58 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 60 ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||| ||||||||| ||||||||||||||| Sbjct: 40 ttatagccagcacttggctatactattaaccatgctct 3
>emb|AJ864786.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7G07 Length = 280 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataag 51 ||||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107 gataaaagtagtactcttttatagctaactattgtacaagatagctataag 57 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 60 ttatagccagcagttggctatagtattaaccatgctct 97 ||||||| ||||||| |||||| ||||||||||||||| Sbjct: 40 ttatagctagcagttagctatactattaaccatgctct 3
>emb|AJ864769.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7D09 Length = 280 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 2 ataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggctat 60 |||||| ||||||||||||||| ||||||||||||||||||||||||||| | |||||| Sbjct: 106 ataaaagtagtactcttttataactaactattgtacaagctagctataagatgggctat 48
>emb|AJ864745.1| Hordeum vulgare subsp. spontaneum transposon Talisker, clone SQ003T7F04 Length = 282 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataag 51 ||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 108 gataaaagtattactcttttatagctaactattgtacaagctagctataag 58 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 60 ttatagccagcagttggctatagtattaaccatgctct 97 ||||| |||||||||||||||| |||||||| |||||| Sbjct: 40 ttataaccagcagttggctatactattaaccttgctct 3
>emb|AJ864788.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ003T7A02 Length = 280 Score = 83.8 bits (42), Expect = 5e-13 Identities = 90/106 (84%), Gaps = 10/106 (9%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggctat 60 ||||||| || |||||||| |||||||||||||||||||||||||||||| | |||||| Sbjct: 107 gataaaaataatactctttg-tagctaactattgtacaagctagctataagatgggctat 49 Query: 61 ---------tatagccagcagttggctatagtattaaccatgctct 97 ||||||||||||||||||||| ||||||||||||||| Sbjct: 48 aagactgcttatagccagcagttggctatactattaaccatgctct 3
>emb|AJ864771.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7E11 Length = 281 Score = 83.8 bits (42), Expect = 5e-13 Identities = 89/106 (83%), Gaps = 9/106 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| ||||||||| ||||||||||||||| ||||||||||||||||| | ||||| Sbjct: 108 gataaaagtagtactctgttatagctaactattatacaagctagctataagatgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctct 97 ||| |||||||||||||||||| |||||||| |||||| Sbjct: 48 aagatggcttagagccagcagttggctatactattaaccttgctct 3
>emb|AJ864757.1| Hordeum vulgare subsp. spontaneum transposon Talisker, clone SQ003T7H02 Length = 269 Score = 83.8 bits (42), Expect = 5e-13 Identities = 89/106 (83%), Gaps = 9/106 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| ||||||||| ||||||||||||||| | |||||||||||||| || ||||| Sbjct: 108 gataaaagtagtactctgttatagctaactattatgcaagctagctataatgtgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctct 97 ||||| |||||||||||||||| ||||||||||||||| Sbjct: 48 aagactgcttataaccagcagttggctatactattaaccatgctct 3
>emb|AJ864726.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7H07 Length = 280 Score = 83.8 bits (42), Expect = 5e-13 Identities = 89/106 (83%), Gaps = 9/106 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| |||||||| || |||||||||||||||||||| |||||||||| | ||||| Sbjct: 108 gataaaagtagtactccttcatagctaactattgtacaagttagctataagatgggctat 49 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| |||||| |||||||| Sbjct: 48 aagactgcttatagccagcagttggctatactattaaacatgctct 3
>emb|AJ864725.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7E08 Length = 328 Score = 83.8 bits (42), Expect = 5e-13 Identities = 89/106 (83%), Gaps = 9/106 (8%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggcta- 59 ||||||| |||||||| |||| ||||||||||||||||||||||||||| ||| |||| Sbjct: 154 gataaaagtagtactcatttacagctaactattgtacaagctagctatagggtgagctat 95 Query: 60 --------ttatagccagcagttggctatagtattaaccatgctct 97 ||||||||||||||| |||||| ||||||||||||||| Sbjct: 94 aagaatgcttatagccagcagttagctatactattaaccatgctct 49 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 60 ttatagccagcagttggctatagtattaaccatgctct 97 ||||| |||||||||||||||| |||||||| |||||| Sbjct: 40 ttatatccagcagttggctatactattaaccttgctct 3
>emb|AJ864770.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7D10 Length = 281 Score = 79.8 bits (40), Expect = 8e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctat 48 ||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 108 gataaaagtaatactcttttatagctaactattgtacaagctagctat 61
>emb|AJ864760.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7H06 Length = 281 Score = 79.8 bits (40), Expect = 8e-12 Identities = 49/52 (94%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataagg 52 ||||||| |||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 108 gataaaagtagtactcttttatagctaaatattgtacaagttagctataagg 57 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 63 tagccagcagttggctatagtattaaccatgctct 97 |||||| |||||||||||| ||||||||||||||| Sbjct: 37 tagccaacagttggctatactattaaccatgctct 3
>emb|AJ864751.1| Hordeum vulgare subsp. spontaneum transposon Talisker, clone SQ003T7B03 Length = 281 Score = 79.8 bits (40), Expect = 8e-12 Identities = 55/60 (91%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataaggtaggctat 60 ||||||| |||||||||||||||||||||||||||| ||||| ||||||||| |||||| Sbjct: 108 gataaaagtagtactcttttatagctaactattgtataagctgactataaggtgggctat 49
>emb|AJ864748.1| Hordeum vulgare subsp. spontaneum transposon Talisker, clone SQ003T7F01 Length = 268 Score = 79.8 bits (40), Expect = 8e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 4 aaaattagtactcttttatagctaactattgtacaagctagctataag 51 |||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 105 aaaagtagtactcttttatagctaactattgtacaaactagctataag 58 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 60 ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| ||||||||||||||| Sbjct: 40 ttatagccagcagttggctatactattaaccatgctct 3
>emb|AJ864789.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7C09 Length = 281 Score = 77.8 bits (39), Expect = 3e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataag 51 ||||||| |||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 108 gataaaagtagtactcttttgtagctaactattgtacaagctggctataag 58 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 60 ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| |||||||| |||||| Sbjct: 40 ttatagccagcagttggctatactattaaccttgctct 3
>emb|AJ864740.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7H08 Length = 281 Score = 77.8 bits (39), Expect = 3e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataag 51 ||||||| ||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 108 gataaaagtagtacttttttacagctaactattgtacaagctagctataag 58 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 60 ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| ||||||||||||||| Sbjct: 40 ttatagccagcagttggctatactattaaccatgctct 3
>emb|AJ864734.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7D07 Length = 230 Score = 77.8 bits (39), Expect = 3e-11 Identities = 80/95 (84%), Gaps = 9/95 (9%) Strand = Plus / Minus Query: 12 tactcttttatagctaactattgtacaagctagctataaggtaggcta---------tta 62 |||||||||||||||||||||| |||| |||||||||||| | ||||| ||| Sbjct: 97 tactcttttatagctaactattatacatgctagctataagatgggctataagatggctta 38 Query: 63 tagccagcagttggctatagtattaaccatgctct 97 |||||||| |||||||||| ||||||||||||||| Sbjct: 37 tagccagctgttggctatactattaaccatgctct 3
>emb|AJ864782.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7A11 Length = 281 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataa 50 ||||||| |||| |||||||||||||||||||||||||||||| |||||| Sbjct: 108 gataaaagtagttctcttttatagctaactattgtacaagctaactataa 59
>emb|AJ864772.1| Hordeum vulgare subsp. spontaneum transposon Talisker, clone SQ003T7G02 Length = 281 Score = 75.8 bits (38), Expect = 1e-10 Identities = 76/90 (84%), Gaps = 9/90 (10%) Strand = Plus / Minus Query: 17 ttttatagctaactattgtacaagctagctataaggtaggcta---------ttatagcc 67 ||||||| ||||||||||||||||||||||||||| | ||||| |||||||| Sbjct: 92 ttttatatctaactattgtacaagctagctataagatgggctataagatgtcttatagcc 33 Query: 68 agcagttggctatagtattaaccatgctct 97 |||||||||||||| |||||||| |||||| Sbjct: 32 agcagttggctatactattaaccttgctct 3
>emb|AJ864793.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ003T7A01 Length = 281 Score = 69.9 bits (35), Expect = 7e-09 Identities = 41/43 (95%) Strand = Plus / Minus Query: 9 tagtactcttttatagctaactattgtacaagctagctataag 51 |||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 100 tagtgctcttttatagctaactattgtacaatctagctataag 58 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 60 ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| ||||||||||||||| Sbjct: 40 ttatagccagcagttggctatactattaaccatgctct 3
>emb|AJ864790.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7G05 Length = 281 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataag 51 ||||||| ||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 108 gataaaagtagtactcttttatagctaactattatacaagctgactataag 58 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 60 ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| ||||||||||||||| Sbjct: 40 ttatagccagcagttggctatactattaaccatgctct 3
>emb|AJ864785.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7A12 Length = 281 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataag 51 ||||||| || ||||||||||||||||| |||| ||||||||||||||||| Sbjct: 108 gataaaaataatactcttttatagctaagtattatacaagctagctataag 58 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 60 ttatagccagcagttggctatagtattaaccatgctct 97 ||||||||||||||| |||||| ||||||||||||||| Sbjct: 40 ttatagccagcagttagctatactattaaccatgctct 3
>emb|AJ864741.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7G08 Length = 281 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataag 51 ||||||| || |||||||||||||||||||||||||||| |||||| |||| Sbjct: 108 gataaaagtaatactcttttatagctaactattgtacaaactagctgtaag 58 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 60 ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| ||||||||||||||| Sbjct: 40 ttatagccagcagttggctatactattaaccatgctct 3
>emb|AJ864761.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7C12 Length = 281 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 60 ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| ||||||||||||||| Sbjct: 40 ttatagccagcagttggctatactattaaccatgctct 3 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataag 51 ||||||| |||||| ||||||||| || |||| ||||||||||||||||| Sbjct: 108 gataaaagcagtacttttttatagccaattattatacaagctagctataag 58
>emb|AJ864753.1| Hordeum vulgare subsp. spontaneum transposon Talisker, clone SQ003T7H01 Length = 285 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 60 ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| ||||||||||||||| Sbjct: 40 ttatagccagcagttggctatactattaaccatgctct 3 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 9 tagtactcttttatagctaactattgtacaagctagctataaggt 53 ||||||| |||||||||||||||||||||| || |||||||||| Sbjct: 100 tagtacttttttatagctaactattgtacagactggctataaggt 56
>emb|AJ864736.1| Hordeum vulgare subsp. spontaneum transposon Talisker, clone SQ003T7A04 Length = 281 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 60 ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| ||||||||||||||| Sbjct: 40 ttatagccagcagttggctatactattaaccatgctct 3 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagcta 47 ||||||| ||||||| ||||||||||||||||| |||||||| |||| Sbjct: 108 gataaaaatagtacttttttatagctaactattatacaagctggcta 62
>emb|AJ864733.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7E09 Length = 281 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 60 ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||||||| ||||||||||||||| Sbjct: 40 ttatagccagcagttggctatactattaaccatgctct 3 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 17 ttttatagctaactattgtacaagctagctataag 51 ||||||||||||||||| ||||| ||||||||||| Sbjct: 92 ttttatagctaactattatacaaactagctataag 58
>emb|AJ864732.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7F12 Length = 280 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 17 ttttatagctaactattgtacaagctagctata 49 ||||||||||||||||||||||||||||||||| Sbjct: 92 ttttatagctaactattgtacaagctagctata 60 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 60 ttatagccagcagttggctatagtattaaccatgctctta 99 |||||||||||||||||||||| |||||| |||||||||| Sbjct: 40 ttatagccagcagttggctatactattaaacatgctctta 1
>gb|AF525024.1| Hordeum vulgare subsp. vulgare HGA6 (HGA6) gene, complete cds Length = 2692 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 60 ttatagccagcagttggctatagtattaaccatgctcttaatcg 103 |||||| |||||||| |||||| ||||||||||||||||||||| Sbjct: 1264 ttatagtcagcagttagctatactattaaccatgctcttaatcg 1221 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataag 51 ||||||| ||||| ||||||||||||||||||| || ||| ||| |||||| Sbjct: 1332 gataaaagtagtattcttttatagctaactattatataagatagttataag 1282
>emb|AJ864756.1| Hordeum vulgare subsp. spontaneum transposon Talisker, clone SQ003T7C03 Length = 283 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattgtacaagctagctataag 51 ||||||| ||||| | ||||||||||||||||| ||||||||| ||||||| Sbjct: 108 gataaaagtagtatttttttatagctaactattatacaagctaactataag 58 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 61 tatagccagcagttggctatagtattaaccatgctct 97 |||| ||||||||| |||||| ||||||||||||||| Sbjct: 39 tataaccagcagtttgctatactattaaccatgctct 3
>emb|AJ864795.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002_T7_H05 Length = 237 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattg 34 ||||||| |||||||||||||||||||||||||| Sbjct: 64 gataaaaatagtactcttttatagctaactattg 31 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 69 gcagttggctatagtattaaccatgctct 97 ||||||||||||| |||||||| |||||| Sbjct: 31 gcagttggctatactattaaccttgctct 3
>emb|AJ864794.1| Hordeum vulgare subsp. vulgare transposon Talisker, clone SQ002T7C11 Length = 237 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 1 gataaaattagtactcttttatagctaactattg 34 ||||||| |||||||||||||||||||||||||| Sbjct: 64 gataaaaatagtactcttttatagctaactattg 31 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 69 gcagttggctatagtattaaccatgctct 97 ||||||||||||| ||||||||||||||| Sbjct: 31 gcagttggctatactattaaccatgctct 3
>gb|AC099404.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0019D02, complete sequence Length = 154692 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 407 ctgcccttcgcctccaggttctccggcgtgaacgcgtgctt 447 |||||||| || |||||||||||| ||| |||||||||||| Sbjct: 150543 ctgcccttggcgtccaggttctcctgcgcgaacgcgtgctt 150503
>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBb0004A05, complete sequence Length = 157913 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 407 ctgcccttcgcctccaggttctccggcgtgaacgcgtgctt 447 |||||||| || |||||||||||| ||| |||||||||||| Sbjct: 35217 ctgcccttggcgtccaggttctcctgcgcgaacgcgtgctt 35177
>gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genomic sequence, complete sequence Length = 141691 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 64 agccagcagttggctatagtattaaccatgctcttaa 100 |||||||||||||||||| |||||| | ||||||||| Sbjct: 30702 agccagcagttggctatactattaaacttgctcttaa 30738
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 64 agccagcagttggctatagtattaaccatgctcttaa 100 |||||||||||||||||| |||||| | ||||||||| Sbjct: 24654516 agccagcagttggctatactattaaacttgctcttaa 24654552 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 68 agcagttggctatagtattaaccatgctctta 99 |||||| |||||||||||||| | |||||||| Sbjct: 28047721 agcagtgggctatagtattaaacttgctctta 28047690 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||| ||||||||||| |||| ||| |||||||| Sbjct: 23497582 agccagtagttggctatactattgaccttgctctta 23497617 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||| ||||||||||| |||||| | |||||||| Sbjct: 23291527 agccagtagttggctatactattaaacttgctctta 23291562
>emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0025B02 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136470 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 64 agccagcagttggctatagtattaaccatgctcttaa 100 |||||||||||||||||| |||||| | ||||||||| Sbjct: 86562 agccagcagttggctatactattaaacttgctcttaa 86598
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 407 ctgcccttcgcctccaggttctccggcgtgaacgcgtgctt 447 |||||||| || |||||||||||| ||| |||||||||||| Sbjct: 19105258 ctgcccttggcgtccaggttctcctgcgcgaacgcgtgctt 19105218 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Minus Query: 64 agccagcagttggctatagtattaaccatgctct 97 |||||| ||||||||||| |||||||| |||||| Sbjct: 20508950 agccagtagttggctatactattaaccttgctct 20508917 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Plus Query: 68 agcagttggctatagtattaaccatgctcttaat 101 |||||||||||||| |||||| | |||||||||| Sbjct: 9736520 agcagttggctatactattaaacttgctcttaat 9736553 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 63 tagccagcagttggctatagtattaaccatgctctta 99 |||||| |||||||||||| |||| ||| |||||||| Sbjct: 12475119 tagccaacagttggctatattattgaccttgctctta 12475083 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 agccagcagttggctatagtattaa 88 |||||||||||||||||| |||||| Sbjct: 4882611 agccagcagttggctatactattaa 4882587 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 agcagttggctatagtattaa 88 ||||||||||||||||||||| Sbjct: 922419 agcagttggctatagtattaa 922399
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 64 agccagcagttggctatagtattaaccatgctcttaa 100 |||||||||||||||||| |||||| | ||||||||| Sbjct: 24571985 agccagcagttggctatactattaaacttgctcttaa 24572021 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 68 agcagttggctatagtattaaccatgctctta 99 |||||| |||||||||||||| | |||||||| Sbjct: 28139045 agcagtgggctatagtattaaacttgctctta 28139014 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||| ||||||||||| |||| ||| |||||||| Sbjct: 23490610 agccagtagttggctatactattgaccttgctctta 23490645 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||| ||||||||||| |||||| | |||||||| Sbjct: 23284555 agccagtagttggctatactattaaacttgctctta 23284590
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.027 Identities = 33/36 (91%) Strand = Plus / Plus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||||||||||||||| |||||| | |||||||| Sbjct: 4741305 agccagcagttggctatactattaaacttgctctta 4741340 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Minus Query: 66 ccagcagttggctatagtattaaccatgctctta 99 |||||||||||||||| |||||| | |||||||| Sbjct: 15272525 ccagcagttggctatactattaaacttgctctta 15272492 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 agccagcagttggctatagtattaa 88 |||||| |||||||||||||||||| Sbjct: 24520893 agccagtagttggctatagtattaa 24520917 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 68 agcagttggctatagtattaaccatgctctta 99 |||||||||||||| |||||| | |||||||| Sbjct: 27518401 agcagttggctatactattaaacttgctctta 27518432
>dbj|AP004280.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0648E08 Length = 135175 Score = 48.1 bits (24), Expect = 0.027 Identities = 33/36 (91%) Strand = Plus / Plus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||||||||||||||| |||||| | |||||||| Sbjct: 16709 agccagcagttggctatactattaaacttgctctta 16744
>dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0698A06 Length = 156514 Score = 48.1 bits (24), Expect = 0.027 Identities = 33/36 (91%) Strand = Plus / Plus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||||||||||||||| |||||| | |||||||| Sbjct: 103904 agccagcagttggctatactattaaacttgctctta 103939
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 18 tttatagctaactattgtacaagctagctat 48 |||||||||||||||||||||| ||||||| Sbjct: 159928 tttatagctaactattgtacaaattagctat 159958
>dbj|AP003281.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0560B06 Length = 161720 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 60 ttatagccagcagttggctatagtattaacc 90 ||||||| |||||||||||||| |||||||| Sbjct: 141147 ttatagctagcagttggctatactattaacc 141177
>gb|AC011806.1|AC011806 Genomic Sequence For Oryza sativa Clone 10P20, Lemont Strain, Complete Sequence, complete sequence Length = 105198 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 60 ttatagccagcagttggctatagtattaacc 90 ||||||| |||||||||||||| |||||||| Sbjct: 78757 ttatagctagcagttggctatactattaacc 78787
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 61 tatagccagcagttggctatagtattaaccatgctctta 99 |||||||||||||||| |||| |||| ||| |||||||| Sbjct: 19553117 tatagccagcagttggttatattattgaccttgctctta 19553155 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Minus Query: 64 agccagcagttggctatagtattaaccatgctct 97 |||||| ||||||||||| |||||||| |||||| Sbjct: 8456002 agccagtagttggctatactattaaccttgctct 8455969 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||||||||||||||| |||| | | |||||||| Sbjct: 20723710 agccagcagttggctatactattgaacttgctctta 20723675
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 18 tttatagctaactattgtacaagctagctat 48 |||||||||||||||||||||| ||||||| Sbjct: 24091439 tttatagctaactattgtacaaattagctat 24091469 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 71 agttggctatagtattaaccatgctctta 99 ||||||||||| |||||||| |||||||| Sbjct: 14521261 agttggctatactattaaccttgctctta 14521233 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 71 agttggctatagtattaaccatgctctta 99 |||||||||||||||||| | |||||||| Sbjct: 961004 agttggctatagtattaaacttgctctta 960976 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 68 agcagttggctatagtattaaccatgctctta 99 |||||| |||||||||||||| | |||||||| Sbjct: 29157012 agcagtgggctatagtattaaacttgctctta 29157043 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ttttatagctaactattgta 36 |||||||||||||||||||| Sbjct: 21109014 ttttatagctaactattgta 21108995 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||| ||||||||||| |||||| | |||||||| Sbjct: 17228309 agccagtagttggctatattattaatcttgctctta 17228274 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||| ||||||||||| |||||| | |||||||| Sbjct: 13470885 agccagtagttggctatactattaaacttgctctta 13470920
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 60 ttatagccagcagttggctatagtattaacc 90 ||||||| |||||||||||||| |||||||| Sbjct: 15125095 ttatagctagcagttggctatactattaacc 15125125 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 71 agttggctatagtattaaccatgctctta 99 ||||||||||| |||||||| |||||||| Sbjct: 3891746 agttggctatactattaaccttgctctta 3891774 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||| ||||||||||| |||||| | |||||||| Sbjct: 36504315 agccagtagttggctatactattaaacttgctctta 36504350 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ttttatagctaactattgta 36 |||||||||||||||||||| Sbjct: 32569385 ttttatagctaactattgta 32569404 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||| ||||||||||| |||||| | |||||||| Sbjct: 23583023 agccagtagttggctatactattaaacttgctctta 23582988 Score = 40.1 bits (20), Expect = 6.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 58 tattatagccagcagttggctatagtattaaccatgctct 97 ||||| |||||| ||||||||||| |||||| | |||||| Sbjct: 14945730 tattagagccagtagttggctatactattaaacttgctct 14945691
>dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0043B10 Length = 167399 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 60 ttatagccagcagttggctatagtattaacc 90 ||||||| |||||||||||||| |||||||| Sbjct: 97061 ttatagctagcagttggctatactattaacc 97091
>dbj|AP005196.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0580A11 Length = 174673 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 61 tatagccagcagttggctatagtattaaccatgctctta 99 |||||||||||||||| |||| |||| ||| |||||||| Sbjct: 96461 tatagccagcagttggttatattattgaccttgctctta 96499
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 207 gcgccggtgctggtgacggcgc 228 |||||||||||||||||||||| Sbjct: 5531659 gcgccggtgctggtgacggcgc 5531638 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 191 gccgacccgctggacggcgccggtg 215 ||||||||||||| ||||||||||| Sbjct: 1038152 gccgacccgctggccggcgccggtg 1038176
>ref|XM_417312.1| PREDICTED: Gallus gallus similar to retinoblastoma-like protein 1 isoform a; cellular protein 107; 107 kDa retinoblastoma-associated protein (LOC419126), mRNA Length = 4771 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 283 cggggtcggcgcggcctcgggagcgg 308 ||||||||| |||||||||||||||| Sbjct: 277 cggggtcggggcggcctcgggagcgg 252
>gb|AC077693.19| Oryza sativa chromosome 10 BAC OSJNBa0095C07 genomic sequence, complete sequence Length = 187707 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Minus Query: 64 agccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||| |||||| | |||||| Sbjct: 128936 agccagcagttggctatactattaaacttgctct 128903 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 71 agttggctatagtattaaccatgctctta 99 ||||||||||| |||||||| |||||||| Sbjct: 80493 agttggctatactattaaccttgctctta 80465
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Minus Query: 64 agccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||| |||||| | |||||| Sbjct: 22123992 agccagcagttggctatactattaaacttgctct 22123959 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 71 agttggctatagtattaaccatgctctta 99 ||||||||||| |||||||| |||||||| Sbjct: 22075949 agttggctatactattaaccttgctctta 22075921 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||| ||||||||||| |||| ||| |||||||| Sbjct: 22207659 agccagtagttggctatactattgaccttgctctta 22207694 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 68 agcagttggctatagtattaaccatgctctta 99 |||||||||||||| |||||| | |||||||| Sbjct: 16858333 agcagttggctatactattaaacttgctctta 16858364
>dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1254_E07 Length = 124028 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Minus Query: 64 agccagcagttggctatagtattaaccatgctct 97 |||||| ||||||||||| |||||||| |||||| Sbjct: 26597 agccagtagttggctatactattaaccttgctct 26564
>dbj|AP005921.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1061F01 Length = 70013 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Minus Query: 66 ccagcagttggctatagtattaaccatgctctta 99 |||||||||||||||| |||||| | |||||||| Sbjct: 5047 ccagcagttggctatactattaaacttgctctta 5014
>dbj|AP005863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0040N23 Length = 101061 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Plus Query: 68 agcagttggctatagtattaaccatgctcttaat 101 |||||||||||||| |||||| | |||||||||| Sbjct: 8939 agcagttggctatactattaaacttgctcttaat 8972
>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0706E03 Length = 188028 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Plus Query: 68 agcagttggctatagtattaaccatgctcttaat 101 |||||||||||||| |||||| | |||||||||| Sbjct: 176617 agcagttggctatactattaaacttgctcttaat 176650
>dbj|AP005178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0056I06 Length = 138653 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Minus Query: 64 agccagcagttggctatagtattaaccatgctct 97 |||||| ||||||||||| |||||||| |||||| Sbjct: 87595 agccagtagttggctatactattaaccttgctct 87562
>gb|AY325816.1| Zea mays BAC clone Z013I05, complete sequence Length = 152337 Score = 44.1 bits (22), Expect = 0.42 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Minus Query: 60 ttatagccagcagttggctatagtattaaccatgctct 97 |||||||||| ||||||||||| |||||||| |||||| Sbjct: 32991 ttatagccag-agttggctatattattaaccttgctct 32955
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Minus Query: 64 agccagcagttggctatagtattaaccatgctct 97 |||||||||||||||||| |||||| | |||||| Sbjct: 22136055 agccagcagttggctatactattaaacttgctct 22136022 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 71 agttggctatagtattaaccatgctctta 99 ||||||||||| |||||||| |||||||| Sbjct: 22087612 agttggctatactattaaccttgctctta 22087584 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||| ||||||||||| |||| ||| |||||||| Sbjct: 22219727 agccagtagttggctatactattgaccttgctctta 22219762 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 68 agcagttggctatagtattaaccatgctctta 99 |||||||||||||| |||||| | |||||||| Sbjct: 16867373 agcagttggctatactattaaacttgctctta 16867404
>gb|AC124141.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0065C11, complete sequence Length = 141578 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 71 agttggctatagtattaaccatgctctta 99 ||||||||||| |||||||| |||||||| Sbjct: 59266 agttggctatactattaaccttgctctta 59238
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 64 agccagcagttggctatagtattaaccatgctcttaa 100 |||||| ||||||||||| ||||||| ||||||||| Sbjct: 7546159 agccagtagttggctatacaattaaccttgctcttaa 7546195
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 71 agttggctatagtattaaccatgctctta 99 |||||||||||||||||| | |||||||| Sbjct: 8920838 agttggctatagtattaaacttgctctta 8920810 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||| ||||||||||| |||||| | |||||||| Sbjct: 3232211 agccagtagttggctatactattaaacttgctctta 3232176
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 agccagcagttggctatagtattaa 88 |||||||||||||||||| |||||| Sbjct: 1537262 agccagcagttggctatactattaa 1537238 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||| ||||||||||| |||||| | |||||||| Sbjct: 32876827 agccagtagttggctatactattaaacttgctctta 32876792 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 68 agcagttggctatagtattaaccatgctctta 99 |||||||||||||| |||||| | |||||||| Sbjct: 30326735 agcagttggctatattattaaacttgctctta 30326704 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ttttatagctaactattgta 36 |||||||||||||||||||| Sbjct: 23108781 ttttatagctaactattgta 23108800 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 ||||| |||||||||||| |||||| | |||||||| Sbjct: 13862100 agccaacagttggctatactattaaacttgctctta 13862065 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 ||||| |||||||||||| |||||| | |||||||| Sbjct: 13685220 agccaacagttggctatactattaaacttgctctta 13685255 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||||||||||||| | |||||| | |||||||| Sbjct: 7071530 agccagcagttggctacattattaaacttgctctta 7071495
>dbj|AP002523.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0013F10 Length = 163095 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 71 agttggctatagtattaaccatgctctta 99 ||||||||||| |||||||| |||||||| Sbjct: 13650 agttggctatactattaaccttgctctta 13678
>dbj|AP005064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0049G15 Length = 155303 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 71 agttggctatagtattaaccatgctctta 99 |||||||||||||||||| | |||||||| Sbjct: 22500 agttggctatagtattaaacttgctctta 22472
>dbj|AP003859.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1033_B09 Length = 120648 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 71 agttggctatagtattaaccatgctctta 99 |||||||||||||||||| | |||||||| Sbjct: 104481 agttggctatagtattaaacttgctctta 104453
>dbj|AP005709.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0646B04 Length = 178896 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 agcagttggctatagtattaa 88 ||||||||||||||||||||| Sbjct: 86546 agcagttggctatagtattaa 86526
>dbj|AP005903.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1012G11 Length = 167168 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 agccagcagttggctatagtattaa 88 |||||||||||||||||| |||||| Sbjct: 65143 agccagcagttggctatactattaa 65119
>dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0040H10 Length = 173301 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 agccagcagttggctatagtattaa 88 |||||| |||||||||||||||||| Sbjct: 4086 agccagtagttggctatagtattaa 4110
>dbj|AP003609.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0012B02 Length = 149807 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 agccagcagttggctatagtattaa 88 |||||| |||||||||||||||||| Sbjct: 132366 agccagtagttggctatagtattaa 132390
>dbj|AP005867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0599F09 Length = 157415 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 63 tagccagcagttggctatagtattaaccatgctctta 99 |||||| |||||||||||| |||| ||| |||||||| Sbjct: 140703 tagccaacagttggctatattattgaccttgctctta 140667
>dbj|AP004886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0576F08 Length = 135314 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 agccagcagttggctatagtattaa 88 |||||||||||||||||| |||||| Sbjct: 100683 agccagcagttggctatactattaa 100659
>dbj|AP001111.1| Oryza sativa genomic DNA, chromosome 5, clone:P0699E04 Length = 175439 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 71 agttggctatagtattaaccatgctctta 99 |||||||||||||||||| | |||||||| Sbjct: 51401 agttggctatagtattaaacttgctctta 51373
>emb|AL662960.3|OSJN00162 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0021F22, complete sequence Length = 181498 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 64 agccagcagttggctatagtattaaccatgctcttaa 100 |||||| ||||||||||| ||||||| ||||||||| Sbjct: 68632 agccagtagttggctatacaattaaccttgctcttaa 68668
>gb|AC091775.10| Oryza sativa chromosome 3 BAC OSJNBa0004G17 genomic sequence, complete sequence Length = 139074 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 68 agcagttggctatagtattaaccatgctctta 99 |||||| |||||||||||||| | |||||||| Sbjct: 105386 agcagtgggctatagtattaaacttgctctta 105417
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 289 cggcgcggcctcgggagcggtctc 312 ||||||||||||||| |||||||| Sbjct: 3130305 cggcgcggcctcgggcgcggtctc 3130328
>gb|AC145323.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0018N12, complete sequence Length = 137127 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tttatagctaactattgtac 37 |||||||||||||||||||| Sbjct: 54758 tttatagctaactattgtac 54777
>gb|AC112209.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0030I09 map C83B, complete sequence Length = 123477 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||| ||||||||||| |||| ||| |||||||| Sbjct: 58470 agccagtagttggctatactattgaccttgctctta 58505
>gb|AC135928.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0686B10, complete sequence Length = 159672 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||| ||||||||||| |||||| | |||||||| Sbjct: 25621 agccagtagttggctatattattaatcttgctctta 25586
>gb|AC137753.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084M23, complete sequence Length = 134180 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 68 agcagttggctatagtattaaccatgctctta 99 |||||||||||||| |||||| | |||||||| Sbjct: 98069 agcagttggctatactattaaacttgctctta 98038
>gb|AC135569.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0018F17, complete sequence Length = 104291 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ttttatagctaactattgta 36 |||||||||||||||||||| Sbjct: 79268 ttttatagctaactattgta 79249
>gb|AC107206.4| Oryza sativa chromosome 3 BAC OSJNBa0063J18 genomic sequence, complete sequence Length = 154558 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||| ||||||||||| |||||| | |||||||| Sbjct: 128008 agccagtagttggctatactattaaacttgctctta 128043
>gb|AC136216.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0022J22, complete sequence Length = 142854 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 68 agcagttggctatagtattaaccatgctctta 99 |||||| |||||||||||||| | |||||||| Sbjct: 40471 agcagtgggctatagtattaaacttgctctta 40502
>gb|AC105769.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1301_G07, complete sequence Length = 106166 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ttttatagctaactattgta 36 |||||||||||||||||||| Sbjct: 87879 ttttatagctaactattgta 87860
>gb|AC105260.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_D04, complete sequence Length = 100800 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 68 agcagttggctatagtattaaccatgctctta 99 |||||| |||||||||||||| | |||||||| Sbjct: 83236 agcagtgggctatagtattaaacttgctctta 83267
>gb|AC098572.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1234_D05, complete sequence Length = 107476 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||| ||||||||||| |||||| | |||||||| Sbjct: 14931 agccagtagttggctatactattaaacttgctctta 14966
>gb|AC136956.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038B22, complete sequence Length = 177557 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 68 agcagttggctatagtattaaccatgctctta 99 |||||||||||||| |||||| | |||||||| Sbjct: 34832 agcagttggctatactattaaacttgctctta 34801
>gb|AF332173.1| Zea mays alpha-expansin 5 mRNA, complete cds Length = 1029 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 202 ggacggcgccggtgctggtgacgg 225 ||||||||||| |||||||||||| Sbjct: 642 ggacggcgccgttgctggtgacgg 619
>gb|AC156937.4| Mus musculus BAC clone RP23-355I5 from chromosome 8, complete sequence Length = 198479 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 217 tggtgacggcgcgttccccttctc 240 ||||||| |||||||||||||||| Sbjct: 56471 tggtgacagcgcgttccccttctc 56448
>gb|AC092780.6| Oryza sativa chromosome 3 BAC OSJNBb0079B16 genomic sequence, complete sequence Length = 144383 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||| ||||||||||| |||| ||| |||||||| Sbjct: 84675 agccagtagttggctatactattgaccttgctctta 84640
>gb|AF547430.1| Mycobacteriophage PG1, complete genome Length = 68999 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 ggccaccggggtcggcgcgg 296 |||||||||||||||||||| Sbjct: 61114 ggccaccggggtcggcgcgg 61133
>emb|Z97630.11|HS466N1 Human DNA sequence from clone RP3-466N1 on chromosome 22q12-13, complete sequence Length = 79528 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 239 tccaggttaccagcagcctcctca 262 ||||| |||||||||||||||||| Sbjct: 28395 tccagtttaccagcagcctcctca 28418
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 415 cgcctccaggttctccggcgtgaacgcg 442 |||||||||| |||||||||||| |||| Sbjct: 171993 cgcctccaggatctccggcgtgaccgcg 171966
>gb|AC093671.3| Homo sapiens BAC clone RP11-542P2 from 4, complete sequence Length = 186370 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 accggggtcggcgcggcctcggga 304 |||||||| ||||||||||||||| Sbjct: 127064 accggggtaggcgcggcctcggga 127087
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 68 agcagttggctatagtattaaccatgctctta 99 |||||||||||||| |||||| | |||||||| Sbjct: 19857836 agcagttggctatactattaaacttgctctta 19857805 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ttttatagctaactattgta 36 |||||||||||||||||||| Sbjct: 17105607 ttttatagctaactattgta 17105588 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tttatagctaactattgtac 37 |||||||||||||||||||| Sbjct: 5102955 tttatagctaactattgtac 5102936 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||| ||||||||||| |||| ||| |||||||| Sbjct: 2563934 agccagtagttggctatactattgaccttgctctta 2563899
>gb|AC008237.4|AC008237 Drosophila melanogaster, chromosome 3R, region 96A-96A, BAC clone BACR47D16, complete sequence Length = 200216 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 agaatcaagacgaacaccggagcc 166 ||||| |||||||||||||||||| Sbjct: 181948 agaatgaagacgaacaccggagcc 181925
>gb|AC009916.5|AC009916 Drosophila melanogaster, chromosome 3R, region 96A-96A, BAC clone BACR35N03, complete sequence Length = 169271 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 143 agaatcaagacgaacaccggagcc 166 ||||| |||||||||||||||||| Sbjct: 93435 agaatgaagacgaacaccggagcc 93458
>gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003O19 genomic sequence, complete sequence Length = 172427 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||| ||||||||||| |||| ||| |||||||| Sbjct: 24902 agccagtagttggctatactattgaccttgctctta 24937
>gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNBa0079L16 genomic sequence, complete sequence Length = 147452 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 68 agcagttggctatagtattaaccatgctctta 99 |||||||||||||| |||||| | |||||||| Sbjct: 42785 agcagttggctatactattaaacttgctctta 42816
>dbj|AP003295.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0695H10 Length = 136883 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ttttatagctaactattgta 36 |||||||||||||||||||| Sbjct: 32180 ttttatagctaactattgta 32199
>dbj|AP003242.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0414E03 Length = 139598 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||| ||||||||||| |||||| | |||||||| Sbjct: 17690 agccagtagttggctatactattaaacttgctctta 17725
>dbj|AP003106.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665A11 Length = 166421 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ttttatagctaactattgta 36 |||||||||||||||||||| Sbjct: 156906 ttttatagctaactattgta 156925
>dbj|AP004023.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1126_D09 Length = 138615 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ttttatagctaactattgta 36 |||||||||||||||||||| Sbjct: 75819 ttttatagctaactattgta 75838
>dbj|AP003905.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1177_E11 Length = 92375 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||| ||||||||||| |||||| | |||||||| Sbjct: 88291 agccagtagttggctatactattaaacttgctctta 88256
>dbj|AP005538.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0013K01 Length = 139464 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||| ||||||||||| |||||| | |||||||| Sbjct: 134845 agccagtagttggctatactattaaacttgctctta 134810
>dbj|AP005003.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0495C02 Length = 151467 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||||||||||||| | |||||| | |||||||| Sbjct: 74949 agccagcagttggctacattattaaacttgctctta 74914
>dbj|AP004140.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1534_E09 Length = 126209 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||| ||||||||||| |||||| | |||||||| Sbjct: 31568 agccagtagttggctatactattaaacttgctctta 31533
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||| ||||||||||| |||||| | |||||||| Sbjct: 45722 agccagtagttggctatactattaaacttgctctta 45687
>dbj|AP003856.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0697D09 Length = 158479 Score = 40.1 bits (20), Expect = 6.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 58 tattatagccagcagttggctatagtattaaccatgctct 97 ||||| |||||| ||||||||||| |||||| | |||||| Sbjct: 130556 tattagagccagtagttggctatactattaaacttgctct 130517
>dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025A05 Length = 154298 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||| ||||||||||| |||||| | |||||||| Sbjct: 146328 agccagtagttggctatactattaaacttgctctta 146293
>dbj|AP005770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0065F08 Length = 144091 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 ||||| |||||||||||| |||||| | |||||||| Sbjct: 34102 agccaacagttggctatactattaaacttgctctta 34067
>dbj|AP005610.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0032M14 Length = 146636 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 68 agcagttggctatagtattaaccatgctctta 99 |||||||||||||| |||||| | |||||||| Sbjct: 87959 agcagttggctatactattaaacttgctctta 87990
>dbj|AP005192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0485A07 Length = 166397 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 68 agcagttggctatagtattaaccatgctctta 99 |||||||||||||| |||||| | |||||||| Sbjct: 137470 agcagttggctatactattaaacttgctctta 137501
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||||||||||||||| |||| | | |||||||| Sbjct: 76460 agccagcagttggctatactattgaacttgctctta 76425
>dbj|AB154422.1| Rhodococcus opacus p-Nitrophenol degradation gene cluster (orf1, npcB, npcA, npcC, orf5, orf6, orf7, orf8), complete and partial cds Length = 7517 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 cggggcggcgtccgtcgctc 386 |||||||||||||||||||| Sbjct: 6221 cggggcggcgtccgtcgctc 6202
>dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0072H09 Length = 160541 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 68 agcagttggctatagtattaaccatgctctta 99 |||||||||||||| |||||| | |||||||| Sbjct: 7595 agcagttggctatattattaaacttgctctta 7564
>dbj|AP005284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1121A12 Length = 138796 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 68 agcagttggctatagtattaaccatgctctta 99 |||||||||||||| |||||| | |||||||| Sbjct: 127652 agcagttggctatattattaaacttgctctta 127621
>dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0438H08 Length = 148626 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||| ||||||||||| |||||| | |||||||| Sbjct: 9778 agccagtagttggctatactattaaacttgctctta 9743
>emb|CR735126.7| Zebrafish DNA sequence from clone DKEY-208L10 in linkage group 19, complete sequence Length = 95820 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 tgtacaagctagctataagg 52 |||||||||||||||||||| Sbjct: 82666 tgtacaagctagctataagg 82685
>gb|AY109967.1| Zea mays CL5898_1 mRNA sequence Length = 570 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 202 ggacggcgccggtgctggtgacgg 225 ||||||||||| |||||||||||| Sbjct: 158 ggacggcgccgttgctggtgacgg 135
>gb|AE003748.3| Drosophila melanogaster chromosome 3R, section 86 of 118 of the complete sequence Length = 253272 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 agaatcaagacgaacaccggagcc 166 ||||| |||||||||||||||||| Sbjct: 192643 agaatgaagacgaacaccggagcc 192620
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 68 agcagttggctatagtattaaccatgctctta 99 |||||||||||||| |||||| | |||||||| Sbjct: 20142744 agcagttggctatactattaaacttgctctta 20142713 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ttttatagctaactattgta 36 |||||||||||||||||||| Sbjct: 17199993 ttttatagctaactattgta 17199974 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tttatagctaactattgtac 37 |||||||||||||||||||| Sbjct: 5169432 tttatagctaactattgtac 5169413 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 64 agccagcagttggctatagtattaaccatgctctta 99 |||||| ||||||||||| |||| ||| |||||||| Sbjct: 2572965 agccagtagttggctatactattgaccttgctctta 2572930
>gb|AC138025.4| Mus musculus BAC clone RP24-430F5 from 8, complete sequence Length = 165737 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 217 tggtgacggcgcgttccccttctc 240 ||||||| |||||||||||||||| Sbjct: 127085 tggtgacagcgcgttccccttctc 127062 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,663,838 Number of Sequences: 3902068 Number of extensions: 2663838 Number of successful extensions: 55619 Number of sequences better than 10.0: 170 Number of HSP's better than 10.0 without gapping: 202 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 53249 Number of HSP's gapped (non-prelim): 2368 length of query: 483 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 461 effective length of database: 17,147,199,772 effective search space: 7904859094892 effective search space used: 7904859094892 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
