ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbart56a05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_189497.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 759 Score = 238 bits (120), Expect = 1e-59 Identities = 165/180 (91%) Strand = Plus / Minus Query: 271 tcagtactcggcggtggggagctgctcgtgcgagcgctggccgatgaagcagatgtcgta 330 |||||| ||||||||||| ||||| ||||||| |||||||||||||||| ||||||||| Sbjct: 759 tcagtagtcggcggtgggcagctggtcgtgcgggcgctggccgatgaagatgatgtcgta 700 Query: 331 gacgagggcggcgatggcggcgccggcgaaggggccgagccagtacacccagtggttctc 390 || ||| |||||||||||||||||| ||||||||||||||||||| ||||||||||| || Sbjct: 699 gatgagcgcggcgatggcggcgccgacgaaggggccgagccagtagacccagtggttgtc 640 Query: 391 ccagacgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtc 450 |||||| ||| |||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 639 ccagactccggtgacgacggcggggccgaaggagacggcggggttcatggaggcgccgtc 580
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 238 bits (120), Expect = 1e-59 Identities = 165/180 (91%) Strand = Plus / Plus Query: 271 tcagtactcggcggtggggagctgctcgtgcgagcgctggccgatgaagcagatgtcgta 330 |||||| ||||||||||| ||||| ||||||| |||||||||||||||| ||||||||| Sbjct: 43108668 tcagtagtcggcggtgggcagctggtcgtgcgggcgctggccgatgaagatgatgtcgta 43108727 Query: 331 gacgagggcggcgatggcggcgccggcgaaggggccgagccagtacacccagtggttctc 390 || ||| |||||||||||||||||| ||||||||||||||||||| ||||||||||| || Sbjct: 43108728 gatgagcgcggcgatggcggcgccgacgaaggggccgagccagtagacccagtggttgtc 43108787 Query: 391 ccagacgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtc 450 |||||| ||| |||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 43108788 ccagactccggtgacgacggcggggccgaaggagacggcggggttcatggaggcgccgtc 43108847 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 339 cggcgatggcggcgccggcgaaggggccgagccagtacacccagtggt 386 |||||| | |||||||| |||||| |||||||||||||||||||||| Sbjct: 6644923 cggcgaggccggcgccgatgaagggaccgagccagtacacccagtggt 6644970 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 212 ttctcaatctctcatggcgat 232 ||||||||||||||||||||| Sbjct: 3810439 ttctcaatctctcatggcgat 3810419 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 413 gggccgaaggagacggcggggttcatggacgcgccg 448 |||||||||||| ||| ||||||||||| |||||| Sbjct: 7297471 gggccgaaggagcgggccgggttcatggaggcgccg 7297436 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 335 agggcggcgatggcggcgccggcg 358 |||||||||||||||||| ||||| Sbjct: 3810342 agggcggcgatggcggcggcggcg 3810319
>dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0459B04 Length = 142475 Score = 238 bits (120), Expect = 1e-59 Identities = 165/180 (91%) Strand = Plus / Plus Query: 271 tcagtactcggcggtggggagctgctcgtgcgagcgctggccgatgaagcagatgtcgta 330 |||||| ||||||||||| ||||| ||||||| |||||||||||||||| ||||||||| Sbjct: 105697 tcagtagtcggcggtgggcagctggtcgtgcgggcgctggccgatgaagatgatgtcgta 105756 Query: 331 gacgagggcggcgatggcggcgccggcgaaggggccgagccagtacacccagtggttctc 390 || ||| |||||||||||||||||| ||||||||||||||||||| ||||||||||| || Sbjct: 105757 gatgagcgcggcgatggcggcgccgacgaaggggccgagccagtagacccagtggttgtc 105816 Query: 391 ccagacgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtc 450 |||||| ||| |||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 105817 ccagactccggtgacgacggcggggccgaaggagacggcggggttcatggaggcgccgtc 105876
>dbj|AK111768.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023066H10, full insert sequence Length = 1346 Score = 238 bits (120), Expect = 1e-59 Identities = 165/180 (91%) Strand = Plus / Minus Query: 271 tcagtactcggcggtggggagctgctcgtgcgagcgctggccgatgaagcagatgtcgta 330 |||||| ||||||||||| ||||| ||||||| |||||||||||||||| ||||||||| Sbjct: 783 tcagtagtcggcggtgggcagctggtcgtgcgggcgctggccgatgaagatgatgtcgta 724 Query: 331 gacgagggcggcgatggcggcgccggcgaaggggccgagccagtacacccagtggttctc 390 || ||| |||||||||||||||||| ||||||||||||||||||| ||||||||||| || Sbjct: 723 gatgagcgcggcgatggcggcgccgacgaaggggccgagccagtagacccagtggttgtc 664 Query: 391 ccagacgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtc 450 |||||| ||| |||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 663 ccagactccggtgacgacggcggggccgaaggagacggcggggttcatggaggcgccgtc 604
>dbj|AK111747.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050B20, full insert sequence Length = 1149 Score = 238 bits (120), Expect = 1e-59 Identities = 165/180 (91%) Strand = Plus / Minus Query: 271 tcagtactcggcggtggggagctgctcgtgcgagcgctggccgatgaagcagatgtcgta 330 |||||| ||||||||||| ||||| ||||||| |||||||||||||||| ||||||||| Sbjct: 832 tcagtagtcggcggtgggcagctggtcgtgcgggcgctggccgatgaagatgatgtcgta 773 Query: 331 gacgagggcggcgatggcggcgccggcgaaggggccgagccagtacacccagtggttctc 390 || ||| |||||||||||||||||| ||||||||||||||||||| ||||||||||| || Sbjct: 772 gatgagcgcggcgatggcggcgccgacgaaggggccgagccagtagacccagtggttgtc 713 Query: 391 ccagacgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtc 450 |||||| ||| |||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 712 ccagactccggtgacgacggcggggccgaaggagacggcggggttcatggaggcgccgtc 653
>dbj|AB114829.1| Oryza sativa (japonica cultivar-group) OsTIP1 mRNA for tonoplast intrinsic protein, complete cds Length = 970 Score = 238 bits (120), Expect = 1e-59 Identities = 165/180 (91%) Strand = Plus / Minus Query: 271 tcagtactcggcggtggggagctgctcgtgcgagcgctggccgatgaagcagatgtcgta 330 |||||| ||||||||||| ||||| ||||||| |||||||||||||||| ||||||||| Sbjct: 769 tcagtagtcggcggtgggcagctggtcgtgcgggcgctggccgatgaagatgatgtcgta 710 Query: 331 gacgagggcggcgatggcggcgccggcgaaggggccgagccagtacacccagtggttctc 390 || ||| |||||||||||||||||| ||||||||||||||||||| ||||||||||| || Sbjct: 709 gatgagcgcggcgatggcggcgccgacgaaggggccgagccagtagacccagtggttgtc 650 Query: 391 ccagacgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtc 450 |||||| ||| |||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 649 ccagactccggtgacgacggcggggccgaaggagacggcggggttcatggaggcgccgtc 590
>gb|AF326500.1|AF326500 Zea mays tonoplast membrane integral protein ZmTIP1-2 mRNA, complete cds Length = 1021 Score = 184 bits (93), Expect = 2e-43 Identities = 144/161 (89%) Strand = Plus / Minus Query: 290 agctgctcgtgcgagcgctggccgatgaagcagatgtcgtagacgagggcggcgatggcg 349 ||||||| ||| | |||||| ||||||||| ||||||||||||||| || |||||||| Sbjct: 754 agctgctggtgtgggcgctgcccgatgaagatgatgtcgtagacgagcgccgcgatggcc 695 Query: 350 gcgccggcgaaggggccgagccagtacacccagtggttctcccagacgccgctgaccacg 409 ||||| |||| ||||||| ||||||||||||||||||||||||||||||| |||| ||| Sbjct: 694 gcgcccgcgagtgggccgacccagtacacccagtggttctcccagacgccggtgacgacg 635 Query: 410 gcggggccgaaggagacggcggggttcatggacgcgccgtc 450 || ||||||||||||||||||||||||||||| |||||||| Sbjct: 634 gccgggccgaaggagacggcggggttcatggaggcgccgtc 594
>gb|AY112388.1| Zea mays CL24208_1 mRNA sequence Length = 833 Score = 163 bits (82), Expect = 6e-37 Identities = 129/145 (88%) Strand = Plus / Plus Query: 306 gctggccgatgaagcagatgtcgtagacgagggcggcgatggcggcgccggcgaaggggc 365 |||| ||||||||| ||||||||||||||| || |||||||| ||||| |||| |||| Sbjct: 273 gctgcccgatgaagatgatgtcgtagacgagcgccgcgatggccgcgcccgcgagtgggc 332 Query: 366 cgagccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggaga 425 ||| ||||||||||||||||||||||||||||||| |||| || || ||||||||||||| Sbjct: 333 cgacccagtacacccagtggttctcccagacgccggtgacgacagccgggccgaaggaga 392 Query: 426 cggcggggttcatggacgcgccgtc 450 |||||| ||||||||| |||||||| Sbjct: 393 cggcggngttcatggaggcgccgtc 417
>emb|X80266.1|HVGTIPP H.vulgare mRNA for gamma-TIP-like protein Length = 1020 Score = 95.6 bits (48), Expect = 1e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 361 ggggccgagccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaa 420 |||||||| |||||||||||| |||| | |||| | | |||||| | |||||||||||| Sbjct: 729 ggggccgacccagtacacccactggtacccccactcccagctgacgagggcggggccgaa 670 Query: 421 ggagacggcggggttcatggacgcgccg 448 |||||||||||||||||||||||||||| Sbjct: 669 ggagacggcggggttcatggacgcgccg 642 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 273 agtactcggcggtggggagctgctcgtg 300 |||| |||| |||||||||||||||||| Sbjct: 814 agtagtcggtggtggggagctgctcgtg 787
>gb|U86762.1|TAU86762 Triticum aestivum gamma-type tonoplast intrinsic protein mRNA, complete cds Length = 1133 Score = 95.6 bits (48), Expect = 1e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 361 ggggccgagccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaa 420 |||||||| |||||||||||| |||| | |||| | | |||||| | |||||||||||| Sbjct: 760 ggggccgacccagtacacccactggtacccccactcccagctgacgagggcggggccgaa 701 Query: 421 ggagacggcggggttcatggacgcgccg 448 |||||||||||||||||||||||||||| Sbjct: 700 ggagacggcggggttcatggacgcgccg 673 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 271 tcagtactcggcggtggggagctgctcgtg 300 |||||| |||| |||||||||||||||||| Sbjct: 847 tcagtagtcggtggtggggagctgctcgtg 818
>gb|AY243803.1| Zea mays tonoplast water channel (TIP1-1) mRNA, complete cds Length = 1039 Score = 83.8 bits (42), Expect = 5e-13 Identities = 78/90 (86%) Strand = Plus / Minus Query: 361 ggggccgagccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaa 420 |||||||| |||||||||||| |||| |||| | | |||||| | |||||||||||| Sbjct: 667 ggggccgacccagtacacccactggtagccccactcccagctgacgagggcggggccgaa 608 Query: 421 ggagacggcggggttcatggacgcgccgtc 450 ||| |||||||||||||||||||||||||| Sbjct: 607 ggacacggcggggttcatggacgcgccgtc 578
>gb|AY104464.1| Zea mays PCO114899 mRNA sequence Length = 1167 Score = 83.8 bits (42), Expect = 5e-13 Identities = 78/90 (86%) Strand = Plus / Minus Query: 361 ggggccgagccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaa 420 |||||||| |||||||||||| |||| |||| | | |||||| | |||||||||||| Sbjct: 762 ggggccgacccagtacacccactggtagccccactcccagctgacgagggcggggccgaa 703 Query: 421 ggagacggcggggttcatggacgcgccgtc 450 ||| |||||||||||||||||||||||||| Sbjct: 702 ggacacggcggggttcatggacgcgccgtc 673
>emb|AJ242805.1|SST242805 Sporobolus stapfianus mRNA for putative gamma tonoplast intrinsic protein (TIP) Length = 1146 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 362 gggccgagccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaag 421 ||||||| |||||||||||||||||| | |||| | |||||| | | |||||||||| Sbjct: 744 gggccgacccagtacacccagtggttgttccaggaccagctgacgagcgaggggccgaag 685 Query: 422 gagacggcggggttcatggacgcgccgtc 450 || |||||||||||||||||||||||||| Sbjct: 684 gacacggcggggttcatggacgcgccgtc 656 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 273 agtactcggcggtggggagctgctcgtg 300 |||| |||| |||||||||||||||||| Sbjct: 833 agtagtcggtggtggggagctgctcgtg 806
>gb|BT016300.1| Zea mays clone Contig133 mRNA sequence Length = 1112 Score = 77.8 bits (39), Expect = 3e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 400 gctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtc 450 |||||| | ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 724 gctgacgagggcggggccgaaggacacggcggggttcatggacgcgccgtc 674
>gb|AF037061.1|AF037061 Zea mays tonoplast intrinsic protein (ZmTIP1) mRNA, complete cds Length = 1097 Score = 77.8 bits (39), Expect = 3e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 400 gctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtc 450 |||||| | ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 720 gctgacgagggcggggccgaaggacacggcggggttcatggacgcgccgtc 670
>ref|NM_197137.1| Oryza sativa (japonica cultivar-group) putative beta-tonoplast intrinsic protein (OSJNBa0051D19.19), mRNA Length = 1186 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 339 cggcgatggcggcgccggcgaaggggccgagccagtacacccagtggt 386 |||||| | |||||||| |||||||||||||||||||||||||||||| Sbjct: 854 cggcgaggccggcgccgacgaaggggccgagccagtacacccagtggt 807
>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete sequence Length = 131984 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 339 cggcgatggcggcgccggcgaaggggccgagccagtacacccagtggt 386 |||||| | |||||||| |||||||||||||||||||||||||||||| Sbjct: 26109 cggcgaggccggcgccgacgaaggggccgagccagtacacccagtggt 26156
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 339 cggcgatggcggcgccggcgaaggggccgagccagtacacccagtggt 386 |||||| | |||||||| |||||||||||||||||||||||||||||| Sbjct: 18187019 cggcgaggccggcgccgacgaaggggccgagccagtacacccagtggt 18186972 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 331 gacgagggcggcgatggcggcgccg 355 ||||||||||||||||| ||||||| Sbjct: 14249963 gacgagggcggcgatggtggcgccg 14249987
>dbj|AK111931.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-C03, full insert sequence Length = 1200 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 339 cggcgatggcggcgccggcgaaggggccgagccagtacacccagtggt 386 |||||| | |||||||| |||||||||||||||||||||||||||||| Sbjct: 863 cggcgaggccggcgccgacgaaggggccgagccagtacacccagtggt 816
>dbj|AB114828.1| Oryza sativa (japonica cultivar-group) OsTIP3 mRNA for tonoplast intrinsic protein, complete cds Length = 1178 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 339 cggcgatggcggcgccggcgaaggggccgagccagtacacccagtggt 386 |||||| | |||||||| |||||||||||||||||||||||||||||| Sbjct: 846 cggcgaggccggcgccgacgaaggggccgagccagtacacccagtggt 799
>dbj|AK106383.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-E03, full insert sequence Length = 1787 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 339 cggcgatggcggcgccggcgaaggggccgagccagtacacccagtggt 386 |||||| | |||||||| |||||||||||||||||||||||||||||| Sbjct: 140 cggcgaggccggcgccgacgaaggggccgagccagtacacccagtggt 187
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 339 cggcgatggcggcgccggcgaaggggccgagccagtacacccagtggt 386 |||||| | |||||||| |||||||||||||||||||||||||||||| Sbjct: 18196272 cggcgaggccggcgccgacgaaggggccgagccagtacacccagtggt 18196225 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 331 gacgagggcggcgatggcggcgccg 355 ||||||||||||||||| ||||||| Sbjct: 14258205 gacgagggcggcgatggtggcgccg 14258229
>ref|XM_470213.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 753 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 370 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 429 |||||||||||| ||| ||||||| | |||||| | ||| ||||||||||||||||| Sbjct: 657 ccagtacacccactgggactcccaggaccagctgacgagggccgggccgaaggagacggc 598 Query: 430 ggggttcatggacgcgccgtc 450 ||||||||||| |||||||| Sbjct: 597 cgggttcatggaggcgccgtc 577 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 273 agtactcggcggtggggagctgctcgtg 300 |||| |||| |||||||||||||||||| Sbjct: 751 agtagtcggtggtggggagctgctcgtg 724
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 370 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 429 |||||||||||| ||| ||||||| | |||||| | ||| ||||||||||||||||| Sbjct: 2544825 ccagtacacccactgggactcccaggaccagctgacgagggccgggccgaaggagacggc 2544884 Query: 430 ggggttcatggacgcgccgtc 450 ||||||||||| |||||||| Sbjct: 2544885 cgggttcatggaggcgccgtc 2544905 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 ggcggcgccggcgaaggggcc 366 ||||||||||||||||||||| Sbjct: 36057600 ggcggcgccggcgaaggggcc 36057580 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 337 ggcggcgatggcggcgccggcgaagggg 364 |||||||||||||| | ||||||||||| Sbjct: 33259902 ggcggcgatggcgggggcggcgaagggg 33259929 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 337 ggcggcgatggcggcgccggcgaagggg 364 |||||||||||||||| |||||| |||| Sbjct: 15248524 ggcggcgatggcggcggcggcgaggggg 15248497 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 agtactcggcggtggggagctgctcgtg 300 |||| |||| |||||||||||||||||| Sbjct: 2544731 agtagtcggtggtggggagctgctcgtg 2544758
>gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0067N01, from chromosome 3, complete sequence Length = 159636 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 370 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 429 |||||||||||| ||| ||||||| | |||||| | ||| ||||||||||||||||| Sbjct: 125269 ccagtacacccactgggactcccaggaccagctgacgagggccgggccgaaggagacggc 125210 Query: 430 ggggttcatggacgcgccgtc 450 ||||||||||| |||||||| Sbjct: 125209 cgggttcatggaggcgccgtc 125189 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 273 agtactcggcggtggggagctgctcgtg 300 |||| |||| |||||||||||||||||| Sbjct: 125363 agtagtcggtggtggggagctgctcgtg 125336
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 370 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 429 |||||||||||| ||| ||||||| | |||||| | ||| ||||||||||||||||| Sbjct: 2544935 ccagtacacccactgggactcccaggaccagctgacgagggccgggccgaaggagacggc 2544994 Query: 430 ggggttcatggacgcgccgtc 450 ||||||||||| |||||||| Sbjct: 2544995 cgggttcatggaggcgccgtc 2545015 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 ggcggcgccggcgaaggggcc 366 ||||||||||||||||||||| Sbjct: 36147674 ggcggcgccggcgaaggggcc 36147654 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 337 ggcggcgatggcggcgccggcgaagggg 364 |||||||||||||| | ||||||||||| Sbjct: 33350412 ggcggcgatggcgggggcggcgaagggg 33350439 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 337 ggcggcgatggcggcgccggcgaagggg 364 |||||||||||||||| |||||| |||| Sbjct: 15243058 ggcggcgatggcggcggcggcgaggggg 15243031 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 agtactcggcggtggggagctgctcgtg 300 |||| |||| |||||||||||||||||| Sbjct: 2544841 agtagtcggtggtggggagctgctcgtg 2544868
>dbj|D25534.1|RICYK333 Oryza sativa yk333 mRNA for gamma-Tip, complete cds Length = 1080 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 370 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 429 |||||||||||| ||| ||||||| | |||||| | ||| ||||||||||||||||| Sbjct: 735 ccagtacacccactgggactcccaggaccagctgacgagggccgggccgaaggagacggc 676 Query: 430 ggggttcatggacgcgccgtc 450 ||||||||||| |||||||| Sbjct: 675 cgggttcatggaggcgccgtc 655 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 273 agtactcggcggtggggagctgctcgtg 300 |||| |||| |||||||||||||||||| Sbjct: 829 agtagtcggtggtggggagctgctcgtg 802
>dbj|AK110727.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-E06, full insert sequence Length = 1024 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 370 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 429 |||||||||||| ||| ||||||| | |||||| | ||| ||||||||||||||||| Sbjct: 234 ccagtacacccactgggactcccaggaccagctgacgagggccgggccgaaggagacggc 293 Query: 430 ggggttcatggacgcgccgtc 450 ||||||||||| |||||||| Sbjct: 294 cgggttcatggaggcgccgtc 314 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 agtactcggcggtggggagctgctcgtg 300 |||| |||| |||||||||||||||||| Sbjct: 182 agtagtcggtggtggggagctgctcgtg 209
>dbj|AK104123.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C12, full insert sequence Length = 1034 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 370 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 429 |||||||||||| ||| ||||||| | |||||| | ||| ||||||||||||||||| Sbjct: 744 ccagtacacccactgggactcccaggaccagctgacgagggccgggccgaaggagacggc 685 Query: 430 ggggttcatggacgcgccgtc 450 ||||||||||| |||||||| Sbjct: 684 cgggttcatggaggcgccgtc 664 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 273 agtactcggcggtggggagctgctcgtg 300 |||| |||| |||||||||||||||||| Sbjct: 838 agtagtcggtggtggggagctgctcgtg 811
>dbj|AK068986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003E16, full insert sequence Length = 1082 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 370 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 429 |||||||||||| ||| ||||||| | |||||| | ||| ||||||||||||||||| Sbjct: 746 ccagtacacccactgggactcccaggaccagctgacgagggccgggccgaaggagacggc 687 Query: 430 ggggttcatggacgcgccgtc 450 ||||||||||| |||||||| Sbjct: 686 cgggttcatggaggcgccgtc 666 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 273 agtactcggcggtggggagctgctcgtg 300 |||| |||| |||||||||||||||||| Sbjct: 840 agtagtcggtggtggggagctgctcgtg 813
>dbj|AK059438.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-G11, full insert sequence Length = 551 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 370 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 429 |||||||||||| ||| ||||||| | |||||| | ||| ||||||||||||||||| Sbjct: 270 ccagtacacccactgggactcccaggaccagctgacgagggccgggccgaaggagacggc 211 Query: 430 ggggttcatggacgcgccgtc 450 ||||||||||| |||||||| Sbjct: 210 cgggttcatggaggcgccgtc 190 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 273 agtactcggcggtggggagctgctcgtg 300 |||| |||| |||||||||||||||||| Sbjct: 364 agtagtcggtggtggggagctgctcgtg 337
>dbj|AK058322.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B06, full insert sequence Length = 1055 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 370 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 429 |||||||||||| ||| ||||||| | |||||| | ||| ||||||||||||||||| Sbjct: 742 ccagtacacccactgggactcccaggaccagctgacgagggccgggccgaaggagacggc 683 Query: 430 ggggttcatggacgcgccgtc 450 ||||||||||| |||||||| Sbjct: 682 cgggttcatggaggcgccgtc 662 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 273 agtactcggcggtggggagctgctcgtg 300 |||| |||| |||||||||||||||||| Sbjct: 836 agtagtcggtggtggggagctgctcgtg 809
>emb|AJ289866.2|VVI289866 Vitis vinifera mRNA for putative aquaporin (delta-TIP gene) Length = 1017 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 396 cgccgctgaccacggcggggccgaaggagacggcggggttcat 438 |||||||||| |||||||||||||||||| |||||||||||| Sbjct: 628 cgccgctgacgacggcggggccgaaggagcgggcggggttcat 586
>gb|AF271661.1|AF271661 Vitis berlandieri x Vitis rupestris putative aquaporin TIP1 (TIP1) mRNA, complete cds Length = 1057 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 396 cgccgctgaccacggcggggccgaaggagacggcggggttcat 438 |||||||||| |||||||||||||||||| |||||||||||| Sbjct: 670 cgccgctgacgacggcggggccgaaggagcgggcggggttcat 628
>ref|NM_189871.1| Oryza sativa (japonica cultivar-group), mRNA Length = 576 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 358 gaaggggccgagccagtacacccagtggt 386 ||||||||||||||||||||||||||||| Sbjct: 492 gaaggggccgagccagtacacccagtggt 464
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 358 gaaggggccgagccagtacacccagtggt 386 ||||||||||||||||||||||||||||| Sbjct: 25641797 gaaggggccgagccagtacacccagtggt 25641825 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 341 gcgatggcggcgccggcgaaggggccgagccag 373 ||||||||||||||| |||| ||||||| |||| Sbjct: 15355781 gcgatggcggcgccgacgaacgggccgacccag 15355749
>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0594D10 Length = 143200 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 358 gaaggggccgagccagtacacccagtggt 386 ||||||||||||||||||||||||||||| Sbjct: 95770 gaaggggccgagccagtacacccagtggt 95798
>ref|NM_188505.1| Oryza sativa (japonica cultivar-group), Ozsa8174 predicted mRNA Length = 969 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 339 cggcgatggcggcgccggcgaaggggccgagccagtacacccagtggt 386 |||||| | |||||||| |||||| |||||||||||||||||||||| Sbjct: 880 cggcgaggccggcgccgatgaagggaccgagccagtacacccagtggt 833
>dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483F08 Length = 148985 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 339 cggcgatggcggcgccggcgaaggggccgagccagtacacccagtggt 386 |||||| | |||||||| |||||| |||||||||||||||||||||| Sbjct: 125094 cggcgaggccggcgccgatgaagggaccgagccagtacacccagtggt 125141
>dbj|AB048248.1| Pyrus communis Py-gTIP mRNA for gamma tonoplast intrinsic protein, complete cds Length = 1122 Score = 56.0 bits (28), Expect = 1e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 370 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 429 |||||| |||||||||||||||||| | ||| |||| || || ||||| || ||||| Sbjct: 731 ccagtagacccagtggttctcccagctccagctcaccaacgccggcccgaangaaacggc 672 Query: 430 ggggttcatggacgcgccgtcaa 452 |||||||||||||| ||||||| Sbjct: 671 cgggttcatggacgctccgtcaa 649
>gb|AF326509.1|AF326509 Zea mays tonoplast membrane integral protein ZmTIP5-1 mRNA, complete cds Length = 1021 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 397 gccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgcc 447 ||||||||| ||||| |||||||| ||| ||| ||||||||||||||||| Sbjct: 712 gccgctgacgacggccgggccgaacgagcgggccgggttcatggacgcgcc 662
>gb|AF326508.1|AF326508 Zea mays tonoplast membrane integral protein ZmTIP4-4 mRNA, complete cds Length = 955 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 410 gcggggccgaaggagacggcggggttcatggacgcgccg 448 ||||||||||||||| ||||||||||||||||||||| Sbjct: 708 gcggggccgaaggagcgcgcggggttcatggacgcgccg 670
>gb|AF326506.1|AF326506 Zea mays tonoplast membrane integral protein ZmTIP4-2 mRNA, complete cds Length = 1255 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 362 gggccgagccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaag 421 ||||||| |||||| ||||||||||| |||||| ||| || ||| |||||| |||||| Sbjct: 812 gggccgatccagtagacccagtggttggtccagaccccggtggccatggcgggaccgaag 753 Query: 422 gagacggcggggttcatggacgcgccg 448 || || |||||||||||||||||| Sbjct: 752 gaccgcgccgggttcatggacgcgccg 726
>gb|AF326505.1|AF326505 Zea mays tonoplast membrane integral protein ZmTIP4-1 mRNA, complete cds Length = 1125 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 362 gggccgagccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaag 421 ||||||| |||||| ||||||||||| |||| | ||| || ||| ||| ||||||||| Sbjct: 813 gggccgatccagtagacccagtggtttgtccagtccccggtggccagggccgggccgaag 754 Query: 422 gagacggcggggttcatggacgcgccg 448 ||| || |||||||||||||||||| Sbjct: 753 gagcgtgccgggttcatggacgcgccg 727
>gb|AF326502.1|AF326502 Zea mays tonoplast membrane integral protein ZmTIP2-2 mRNA, complete cds Length = 1073 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 407 acggcggggccgaaggagacggcggggttcatgga 441 |||||||||||||||||| ||||||||||||||| Sbjct: 684 acggcggggccgaaggagcgggcggggttcatgga 650
>gb|AF326501.1|AF326501 Zea mays tonoplast membrane integral protein ZmTIP2-1 mRNA, complete cds Length = 1110 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 407 acggcggggccgaaggagacggcggggttcatgga 441 |||||||||||||||||| ||||||||||||||| Sbjct: 841 acggcggggccgaaggagcgggcggggttcatgga 807
>gb|AY105015.1| Zea mays PCO137646 mRNA sequence Length = 1238 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 407 acggcggggccgaaggagacggcggggttcatgga 441 |||||||||||||||||| ||||||||||||||| Sbjct: 840 acggcggggccgaaggagcgggcggggttcatgga 806
>gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete sequence Length = 136866 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 349 ggcgccggcgaaggggccgagccagtacacccagtggt 386 ||||||| ||||||||||||| ||||||||||||||| Sbjct: 82946 ggcgccgatgaaggggccgagctagtacacccagtggt 82909
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 349 ggcgccggcgaaggggccgagccagtacacccagtggt 386 ||||||| ||||||||||||| ||||||||||||||| Sbjct: 1762730 ggcgccgatgaaggggccgagctagtacacccagtggt 1762693 Score = 44.1 bits (22), Expect = 0.39 Identities = 40/46 (86%) Strand = Plus / Minus Query: 396 cgccgctgaccacggcggggccgaaggagacggcggggttcatgga 441 |||||||| | |||||||||||||||||| || ||||||||||| Sbjct: 13251014 cgccgctggcgacggcggggccgaaggagcgcgccgggttcatgga 13250969 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 ggcggcgatggcggcgccgg 356 |||||||||||||||||||| Sbjct: 28065834 ggcggcgatggcggcgccgg 28065853 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 ggcggcgatggcggcgccgg 356 |||||||||||||||||||| Sbjct: 28023111 ggcggcgatggcggcgccgg 28023092
>dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0679C08 Length = 156266 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 349 ggcgccggcgaaggggccgagccagtacacccagtggt 386 ||||||| ||||||||||||| ||||||||||||||| Sbjct: 87879 ggcgccgatgaaggggccgagctagtacacccagtggt 87842
>gb|AY525641.1| Triticum aestivum delta tonoplast intrinsic protein TIP2;3 mRNA, complete cds Length = 829 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 396 cgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccg 448 |||||||| | |||||||||||||||||| || |||||||||||| ||||| Sbjct: 676 cgccgctggcaacggcggggccgaaggagcgtgcagggttcatggacccgccg 624
>gb|AY525640.1| Triticum aestivum delta tonoplast intrinsic protein TIP2;2 mRNA, complete cds Length = 853 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 396 cgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccg 448 |||||||| | |||||||||||||||||| || |||||||||||| ||||| Sbjct: 679 cgccgctggcaacggcggggccgaaggagcgtgcagggttcatggacccgccg 627
>gb|AY525639.1| Triticum aestivum delta tonoplast intrinsic protein TIP2;1 mRNA, complete cds Length = 817 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 396 cgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccg 448 |||||||| | |||||||||||||||||| || |||||||||||| ||||| Sbjct: 680 cgccgctggcaacggcggggccgaaggagcgtgcagggttcatggacccgccg 628
>gb|AY243804.1| Zea mays tonoplast water channel mRNA, complete cds Length = 968 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 405 ccacggcggggccgaaggagacggcggggttcatgga 441 |||||||||||||||||||| ||| ||||||||||| Sbjct: 619 ccacggcggggccgaaggagcgggccgggttcatgga 583 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Minus Query: 407 acggcggggccgaaggagacggcggggttca 437 |||||| ||||||||| |||||||||||||| Sbjct: 278 acggcgaggccgaaggtgacggcggggttca 248 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 351 cgccggcgaaggggccgagccagtacacccagt 383 ||||| ||| |||||||| |||||||||||||| Sbjct: 673 cgccgacgagggggccgacccagtacacccagt 641
>gb|AF326503.1|AF326503 Zea mays tonoplast membrane integral protein ZmTIP2-3 mRNA, complete cds Length = 1042 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 405 ccacggcggggccgaaggagacggcggggttcatgga 441 |||||||||||||||||||| ||| ||||||||||| Sbjct: 687 ccacggcggggccgaaggagcgggccgggttcatgga 651 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Minus Query: 407 acggcggggccgaaggagacggcggggttca 437 |||||| ||||||||| |||||||||||||| Sbjct: 346 acggcgaggccgaaggtgacggcggggttca 316 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 351 cgccggcgaaggggccgagccagtacacccagt 383 ||||| ||| |||||||| |||||||||||||| Sbjct: 741 cgccgacgagggggccgacccagtacacccagt 709
>gb|AF133531.1|AF133531 Mesembryanthemum crystallinum water channel protein MipI (MipI) mRNA, complete cds Length = 1035 Score = 50.1 bits (25), Expect = 0.006 Identities = 75/89 (84%), Gaps = 2/89 (2%) Strand = Plus / Minus Query: 365 ccgagccagtacacccagtggttctccca-gacgccgctgaccacggcggggccgaagga 423 ||||||||||| ||||||||||| | ||| ||| | |||||| || || ||||||||||| Sbjct: 735 ccgagccagtagacccagtggttgttccatgac-cagctgacaacagcagggccgaagga 677 Query: 424 gacggcggggttcatggacgcgccgtcaa 452 || || ||||||||||| || ||||||| Sbjct: 676 cactgcagggttcatggatgcaccgtcaa 648
>gb|AY106931.1| Zea mays PCO140073 mRNA sequence Length = 1069 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 405 ccacggcggggccgaaggagacggcggggttcatgga 441 |||||||||||||||||||| ||| ||||||||||| Sbjct: 696 ccacggcggggccgaaggagcgggccgggttcatgga 660 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Minus Query: 407 acggcggggccgaaggagacggcggggttca 437 |||||| ||||||||| |||||||||||||| Sbjct: 355 acggcgaggccgaaggtgacggcggggttca 325 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 351 cgccggcgaaggggccgagccagtacacccagt 383 ||||| ||| |||||||| |||||||||||||| Sbjct: 750 cgccgacgagggggccgacccagtacacccagt 718
>gb|U86763.1|TAU86763 Triticum aestivum delta-type tonoplast intrinsic protein mRNA, complete cds Length = 1067 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 396 cgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccg 448 |||||||| | |||||||||||||||||| || |||||||||||| ||||| Sbjct: 682 cgccgctggcaacggcggggccgaaggagcgtgcagggttcatggacccgccg 630
>gb|AF057183.1|AF057183 Zea mays putative tonoplast aquaporin mRNA, complete cds Length = 1060 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 405 ccacggcggggccgaaggagacggcggggttcatgga 441 |||||||||||||||||||| ||| ||||||||||| Sbjct: 678 ccacggcggggccgaaggagcgggccgggttcatgga 642 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Minus Query: 407 acggcggggccgaaggagacggcggggttca 437 |||||| ||||||||| |||||||||||||| Sbjct: 337 acggcgaggccgaaggtgacggcggggttca 307 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 351 cgccggcgaaggggccgagccagtacacccagt 383 ||||| ||| |||||||| |||||||||||||| Sbjct: 732 cgccgacgagggggccgacccagtacacccagt 700
>gb|AY626938.1| Sparus aurata aquaporin 1-like mRNA, complete cds Length = 1015 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 368 agccagtacacccagtggttctcc 391 |||||||||||||||||||||||| Sbjct: 646 agccagtacacccagtggttctcc 623
>gb|AF521135.1| Kandelia candel tonoplast intrinsic protein (TIP) mRNA, complete cds Length = 1099 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 370 ccagtacacccagtggttctccca 393 |||||||||||||||||||||||| Sbjct: 758 ccagtacacccagtggttctccca 735 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 gcggtggggagctgctcgtg 300 |||||||||||||||||||| Sbjct: 847 gcggtggggagctgctcgtg 828
>gb|AF521142.1| Kandelia candel tonoplast intrinsic protein mRNA, partial cds Length = 175 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 370 ccagtacacccagtggttctccca 393 |||||||||||||||||||||||| Sbjct: 164 ccagtacacccagtggttctccca 141
>gb|AF326507.1|AF326507 Zea mays tonoplast membrane integral protein ZmTIP4-3 mRNA, complete cds Length = 1045 Score = 48.1 bits (24), Expect = 0.025 Identities = 78/96 (81%) Strand = Plus / Minus Query: 353 ccggcgaaggggccgagccagtacacccagtggttctcccagacgccgctgaccacggcg 412 ||||||| ||||| | ||||||||||||||||| | ||||||||| | | |||||| Sbjct: 770 ccggcgagcgggccaacccagtacacccagtggtgcgtccagacgcccgaggcgacggcg 711 Query: 413 gggccgaaggagacggcggggttcatggacgcgccg 448 || |||||||| ||| ||||||||||| |||||| Sbjct: 710 ggcccgaaggacctggccgggttcatggaggcgccg 675
>gb|U92651.2|BOU92651 Brassica oleracea var. botrytis tonoplast intrinsic protein bobTIP26-1 mRNA, complete cds Length = 942 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Minus Query: 270 ttcagtactcggcggtggggagctgctcgtg 300 ||||||| ||||||||||||||||| ||||| Sbjct: 793 ttcagtagtcggcggtggggagctgttcgtg 763
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 408 cggcggggccgaaggagacggcg 430 ||||||||||||||||||||||| Sbjct: 8461222 cggcggggccgaaggagacggcg 8461200 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 409 ggcggggccgaaggagacggcg 430 |||||||||||||||||||||| Sbjct: 8473737 ggcggggccgaaggagacggcg 8473716 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 331 gacgagggcggcgatggcggcgccggcg 358 ||||| |||||||||||||||| ||||| Sbjct: 17580352 gacgacggcggcgatggcggcggcggcg 17580379
>gb|AF326504.1|AF326504 Zea mays tonoplast membrane integral protein ZmTIP3-1 mRNA, complete cds Length = 989 Score = 46.1 bits (23), Expect = 0.099 Identities = 35/39 (89%) Strand = Plus / Minus Query: 348 cggcgccggcgaaggggccgagccagtacacccagtggt 386 |||||||| ||| ||||| ||||||||||||||||||| Sbjct: 744 cggcgccgaggaaagggcccagccagtacacccagtggt 706
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 333 cgagggcggcgatggcggcgccggcga 359 |||| |||||||||||||||||||||| Sbjct: 292613 cgagcgcggcgatggcggcgccggcga 292587
>gb|AY104541.1| Zea mays PCO074685 mRNA sequence Length = 633 Score = 46.1 bits (23), Expect = 0.099 Identities = 35/39 (89%) Strand = Plus / Plus Query: 348 cggcgccggcgaaggggccgagccagtacacccagtggt 386 |||||||| ||| ||||| ||||||||||||||||||| Sbjct: 354 cggcgccgaggaaagggcccagccagtacacccagtggt 392
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 408 cggcggggccgaaggagacggcg 430 ||||||||||||||||||||||| Sbjct: 8461105 cggcggggccgaaggagacggcg 8461083 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 409 ggcggggccgaaggagacggcg 430 |||||||||||||||||||||| Sbjct: 8473620 ggcggggccgaaggagacggcg 8473599 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 331 gacgagggcggcgatggcggcgccggcg 358 ||||| |||||||||||||||| ||||| Sbjct: 17534723 gacgacggcggcgatggcggcggcggcg 17534750
>emb|AL928775.2|CNS08CC5 Oryza sativa chromosome 12, . BAC OSJNBa0030N06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146444 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 408 cggcggggccgaaggagacggcg 430 ||||||||||||||||||||||| Sbjct: 67885 cggcggggccgaaggagacggcg 67863 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 409 ggcggggccgaaggagacggcg 430 |||||||||||||||||||||| Sbjct: 80400 ggcggggccgaaggagacggcg 80379
>gb|BT017952.1| Zea mays clone EL01N0522D02.c mRNA sequence Length = 502 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 337 ggcggcgatggcggcgccggcgaagg 362 |||||||| ||||||||||||||||| Sbjct: 156 ggcggcgagggcggcgccggcgaagg 131
>gb|AC136491.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0062E06, complete sequence Length = 158842 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 339 cggcgatggcggcgccggcgaagggg 364 ||||| |||||||||||||||||||| Sbjct: 105361 cggcggtggcggcgccggcgaagggg 105386
>emb|AL117340.3|HSBA192P3 Human DNA sequence from clone RP11-192P3 on chromosome 10 Contains a novel gene, the 5' end of the TCF8 gene for transcription factor 8 (represses interleukin 2 expression) (BZP,ZEB,ZEB1,AREB6,ZFHEP,NIL-2A,ZFHX1A,NIL-2-A), a pseudogene similar to part of serine palmitoyltransferase, long chain base subunit 1 (SPTLC1) (HSAN, HSN1, LBC1, LCB1, SPT1, SPTI) and two CpG islands, complete sequence Length = 187517 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 122 cacacacagtttaccctgaatt 143 |||||||||||||||||||||| Sbjct: 184855 cacacacagtttaccctgaatt 184834
>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16 Length = 349260 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 338 gcggcgatggcggcgccggcga 359 |||||||||||||||||||||| Sbjct: 189463 gcggcgatggcggcgccggcga 189484
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 331 gacgagggcggcgatggcggcgccggcgaa 360 |||||||||||||| ||||||| ||||||| Sbjct: 98340 gacgagggcggcgacggcggcgacggcgaa 98369 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 gggcggcgatggcggcgccggcga 359 |||||||||||||||| ||||||| Sbjct: 26201 gggcggcgatggcggcaccggcga 26224
>gb|AF367456.1| Prunus persica clone gTip1 gamma-tonoplast intrinsic protein mRNA, partial cds Length = 408 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Minus Query: 400 gctgaccacggcggggccgaaggagacggcggggttcatgga 441 |||||| || ||||| ||||||||||| || ||||||||||| Sbjct: 390 gctgacgacagcgggtccgaaggagactgccgggttcatgga 349
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 339 cggcgatggcggcgccggcgaagggg 364 ||||| |||||||||||||||||||| Sbjct: 17815710 cggcggtggcggcgccggcgaagggg 17815735 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 337 ggcggcgatggcggcgccggcgaa 360 |||||||||||||||| ||||||| Sbjct: 11934523 ggcggcgatggcggcggcggcgaa 11934546
>dbj|AP005449.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427E01 Length = 146395 Score = 44.1 bits (22), Expect = 0.39 Identities = 40/46 (86%) Strand = Plus / Minus Query: 396 cgccgctgaccacggcggggccgaaggagacggcggggttcatgga 441 |||||||| | |||||||||||||||||| || ||||||||||| Sbjct: 12824 cgccgctggcgacggcggggccgaaggagcgcgccgggttcatgga 12779
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 44.1 bits (22), Expect = 0.39 Identities = 40/46 (86%) Strand = Plus / Minus Query: 396 cgccgctgaccacggcggggccgaaggagacggcggggttcatgga 441 |||||||| | |||||||||||||||||| || ||||||||||| Sbjct: 168202 cgccgctggcgacggcggggccgaaggagcgcgccgggttcatgga 168157
>gb|AF225898.1|AF225898 Homo sapiens BAC clone 13d21, complete sequence Length = 198084 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 122 cacacacagtttaccctgaatt 143 |||||||||||||||||||||| Sbjct: 67269 cacacacagtttaccctgaatt 67248
>dbj|AK104464.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C06, full insert sequence Length = 1194 Score = 44.1 bits (22), Expect = 0.39 Identities = 40/46 (86%) Strand = Plus / Minus Query: 396 cgccgctgaccacggcggggccgaaggagacggcggggttcatgga 441 |||||||| | |||||||||||||||||| || ||||||||||| Sbjct: 714 cgccgctggcgacggcggggccgaaggagcgcgccgggttcatgga 669
>dbj|AK104270.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-F03, full insert sequence Length = 1214 Score = 44.1 bits (22), Expect = 0.39 Identities = 40/46 (86%) Strand = Plus / Minus Query: 396 cgccgctgaccacggcggggccgaaggagacggcggggttcatgga 441 |||||||| | |||||||||||||||||| || ||||||||||| Sbjct: 716 cgccgctggcgacggcggggccgaaggagcgcgccgggttcatgga 671
>dbj|AK100193.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036J06, full insert sequence Length = 1074 Score = 44.1 bits (22), Expect = 0.39 Identities = 40/46 (86%) Strand = Plus / Minus Query: 396 cgccgctgaccacggcggggccgaaggagacggcggggttcatgga 441 |||||||| | |||||||||||||||||| || ||||||||||| Sbjct: 594 cgccgctggcgacggcggggccgaaggagcgcgccgggttcatgga 549
>dbj|AK099616.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050J20, full insert sequence Length = 1197 Score = 44.1 bits (22), Expect = 0.39 Identities = 40/46 (86%) Strand = Plus / Minus Query: 396 cgccgctgaccacggcggggccgaaggagacggcggggttcatgga 441 |||||||| | |||||||||||||||||| || ||||||||||| Sbjct: 717 cgccgctggcgacggcggggccgaaggagcgcgccgggttcatgga 672
>dbj|AK099141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055A02, full insert sequence Length = 1195 Score = 44.1 bits (22), Expect = 0.39 Identities = 40/46 (86%) Strand = Plus / Minus Query: 396 cgccgctgaccacggcggggccgaaggagacggcggggttcatgga 441 |||||||| | |||||||||||||||||| || ||||||||||| Sbjct: 715 cgccgctggcgacggcggggccgaaggagcgcgccgggttcatgga 670
>dbj|AK099015.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116H02, full insert sequence Length = 1202 Score = 44.1 bits (22), Expect = 0.39 Identities = 40/46 (86%) Strand = Plus / Minus Query: 396 cgccgctgaccacggcggggccgaaggagacggcggggttcatgga 441 |||||||| | |||||||||||||||||| || ||||||||||| Sbjct: 717 cgccgctggcgacggcggggccgaaggagcgcgccgggttcatgga 672
>dbj|AK073531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044F19, full insert sequence Length = 1220 Score = 44.1 bits (22), Expect = 0.39 Identities = 40/46 (86%) Strand = Plus / Minus Query: 396 cgccgctgaccacggcggggccgaaggagacggcggggttcatgga 441 |||||||| | |||||||||||||||||| || ||||||||||| Sbjct: 715 cgccgctggcgacggcggggccgaaggagcgcgccgggttcatgga 670
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 336 gggcggcgatggcggcgccggc 357 |||||||||||||||||||||| Sbjct: 870643 gggcggcgatggcggcgccggc 870664
>gb|AY108015.1| Zea mays PCO111497 mRNA sequence Length = 495 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 337 ggcggcgatggcggcgccggcgaagg 362 |||||||| ||||||||||||||||| Sbjct: 150 ggcggcgagggcggcgccggcgaagg 125
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 339 cggcgatggcggcgccggcgaagggg 364 ||||| |||||||||||||||||||| Sbjct: 17910026 cggcggtggcggcgccggcgaagggg 17910051 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 337 ggcggcgatggcggcgccggcgaa 360 |||||||||||||||| ||||||| Sbjct: 12012930 ggcggcgatggcggcggcggcgaa 12012953
>ref|NM_196526.1| Oryza sativa (japonica cultivar-group) putative submergence induced protein 2 (OSJNBa0006I13.13), mRNA Length = 1155 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 331 gacgagggcggcgatggcggcgccg 355 ||||||||||||||||| ||||||| Sbjct: 666 gacgagggcggcgatggtggcgccg 642
>ref|NM_187092.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1242 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 341 gcgatggcggcgccggcgaaggggccgagccag 373 ||||||||||||||| |||| ||||||| |||| Sbjct: 907 gcgatggcggcgccgacgaacgggccgacccag 875
>ref|XM_507363.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1047_A06.117 mRNA Length = 1257 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 341 gcgatggcggcgccggcgaaggggccgagccag 373 ||||||||||||||| |||| ||||||| |||| Sbjct: 909 gcgatggcggcgccgacgaacgggccgacccag 877
>ref|XM_506304.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1047_A06.117 mRNA Length = 1298 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 341 gcgatggcggcgccggcgaaggggccgagccag 373 ||||||||||||||| |||| ||||||| |||| Sbjct: 910 gcgatggcggcgccgacgaacgggccgacccag 878
>ref|XM_470514.1| Oryza sativa (japonica cultivar-group), mRNA Length = 843 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 ggcggcgccggcgaaggggcc 366 ||||||||||||||||||||| Sbjct: 756 ggcggcgccggcgaaggggcc 736
>gb|BT012976.1| Lycopersicon esculentum clone 114187R, mRNA sequence Length = 972 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 362 gggccgagccagtacacccagtggttctcccag 394 ||||||||||| || ||||||||||| |||||| Sbjct: 719 gggccgagccaatagacccagtggttgtcccag 687
>ref|XM_856403.1| PREDICTED: Canis familiaris similar to aquaporin 6, transcript variant 2 (LOC607978), mRNA Length = 1082 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ggcggggccgaaggagacggcggggttcatgga 441 |||||||||||||||| ||| ||||||||||| Sbjct: 588 ggcggggccgaaggagcgggccgggttcatgga 556
>ref|XM_845359.1| PREDICTED: Canis familiaris similar to aquaporin 6, transcript variant 1 (LOC607978), mRNA Length = 1067 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ggcggggccgaaggagacggcggggttcatgga 441 |||||||||||||||| ||| ||||||||||| Sbjct: 573 ggcggggccgaaggagcgggccgggttcatgga 541
>gb|AC124174.4| Mus musculus BAC clone RP23-181O22 from chromosome 3, complete sequence Length = 197553 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 375 acacccagtggttctcccaga 395 ||||||||||||||||||||| Sbjct: 157776 acacccagtggttctcccaga 157796
>gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genomic sequence, complete sequence Length = 164179 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 ggcggcgccggcgaaggggcc 366 ||||||||||||||||||||| Sbjct: 119111 ggcggcgccggcgaaggggcc 119091
>dbj|AK147805.1| Mus musculus melanocyte cDNA, RIKEN full-length enriched library, clone:G270047M03 product:similar to Putative RNA methyltransferase [Homo sapiens], full insert sequence Length = 1417 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 343 gatggcggcgccggcgaaggg 363 ||||||||||||||||||||| Sbjct: 18 gatggcggcgccggcgaaggg 38
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome Length = 3544738 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 236 gcatggatgatcagaagagat 256 ||||||||||||||||||||| Sbjct: 1664674 gcatggatgatcagaagagat 1664654
>dbj|AB029446.1| Oryza sativa (indica cultivar-group) rwc-2 mRNA for water channel protein, partial cds Length = 880 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 341 gcgatggcggcgccggcgaaggggccgagccag 373 ||||||||||||||| |||| ||||||| |||| Sbjct: 473 gcgatggcggcgccgacgaacgggccgacccag 441
>dbj|AB206104.1| Mimosa pudica tip1;1 mRNA for tonoplast intrinsic protein 1;1, complete cds Length = 1067 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 362 gggccgagccagtacacccagtggttctcccag 394 ||||||| |||||| ||||||||||| |||||| Sbjct: 738 gggccgacccagtagacccagtggttgtcccag 706 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 273 agtactcggcggtggggagctgctcgtg 300 |||| |||| |||||||||||||||||| Sbjct: 824 agtaatcggtggtggggagctgctcgtg 797
>gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb0006I13 chromosome 10, complete sequence Length = 142737 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 331 gacgagggcggcgatggcggcgccg 355 ||||||||||||||||| ||||||| Sbjct: 122036 gacgagggcggcgatggtggcgccg 122060
>dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1047_A06 Length = 111673 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 341 gcgatggcggcgccggcgaaggggccgagccag 373 ||||||||||||||| |||| ||||||| |||| Sbjct: 62780 gcgatggcggcgccgacgaacgggccgacccag 62748
>dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0089K24 Length = 154137 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 212 ttctcaatctctcatggcgat 232 ||||||||||||||||||||| Sbjct: 83981 ttctcaatctctcatggcgat 83961 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 335 agggcggcgatggcggcgccggcg 358 |||||||||||||||||| ||||| Sbjct: 83884 agggcggcgatggcggcggcggcg 83861
>dbj|AK119656.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-H04, full insert sequence Length = 1216 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 341 gcgatggcggcgccggcgaaggggccgagccag 373 ||||||||||||||| |||| ||||||| |||| Sbjct: 907 gcgatggcggcgccgacgaacgggccgacccag 875
>ref|XM_314890.2| Anopheles gambiae str. PEST ENSANGP00000012326 (ENSANGG00000009837), partial mRNA Length = 1641 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 365 ccgagccagtacacccagtggttctccca 393 |||| |||||||||||||||||| ||||| Sbjct: 752 ccgacccagtacacccagtggttgtccca 724
>dbj|AK109024.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-B04, full insert sequence Length = 1099 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 ggcggcgccggcgaaggggcc 366 ||||||||||||||||||||| Sbjct: 844 ggcggcgccggcgaaggggcc 824
>dbj|AK105524.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-G02, full insert sequence Length = 1451 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 341 gcgatggcggcgccggcgaaggggccgagccag 373 ||||||||||||||| |||| ||||||| |||| Sbjct: 501 gcgatggcggcgccgacgaacgggccgacccag 469
>dbj|AK103970.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-B05, full insert sequence Length = 1242 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 341 gcgatggcggcgccggcgaaggggccgagccag 373 ||||||||||||||| |||| ||||||| |||| Sbjct: 907 gcgatggcggcgccgacgaacgggccgacccag 875
>dbj|AK103938.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G03, full insert sequence Length = 1257 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 341 gcgatggcggcgccggcgaaggggccgagccag 373 ||||||||||||||| |||| ||||||| |||| Sbjct: 909 gcgatggcggcgccgacgaacgggccgacccag 877
>dbj|AK072519.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023128K12, full insert sequence Length = 1298 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 341 gcgatggcggcgccggcgaaggggccgagccag 373 ||||||||||||||| |||| ||||||| |||| Sbjct: 910 gcgatggcggcgccgacgaacgggccgacccag 878
>gb|AF062393.1|AF062393 Oryza sativa aquaporin (PIP2a) mRNA, complete cds Length = 1328 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 341 gcgatggcggcgccggcgaaggggccgagccag 373 ||||||||||||||| |||| ||||||| |||| Sbjct: 897 gcgatggcggcgccgacgaacgggccgacccag 865
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 337 ggcggcgatggcggcgccggc 357 ||||||||||||||||||||| Sbjct: 3194246 ggcggcgatggcggcgccggc 3194266
>ref|XM_550294.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1011 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 agggcggcgatggcggcgccggcg 358 |||||||||||||||||| ||||| Sbjct: 959 agggcggcgatggcggcggcggcg 982
>ref|NM_188624.1| Oryza sativa (japonica cultivar-group), Ozsa8227 predicted mRNA Length = 756 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 413 gggccgaaggagacggcggggttcatggacgcgccg 448 |||||||||||| ||| ||||||||||| |||||| Sbjct: 608 gggccgaaggagcgggccgggttcatggaggcgccg 573
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 tgtcgtagacgagggcggcg 343 |||||||||||||||||||| Sbjct: 1078647 tgtcgtagacgagggcggcg 1078628
>ref|XM_480022.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1572 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 ggcggcgatggcggcgccgg 356 |||||||||||||||||||| Sbjct: 1356 ggcggcgatggcggcgccgg 1337
>ref|XM_469996.1| Oryza sativa (japonica cultivar-group), mRNA Length = 588 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 337 ggcggcgatggcggcgccggcgaagggg 364 |||||||||||||| | ||||||||||| Sbjct: 48 ggcggcgatggcgggggcggcgaagggg 75
>ref|XM_450702.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1563 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 cggcgatggcggcgccggcg 358 |||||||||||||||||||| Sbjct: 1479 cggcgatggcggcgccggcg 1498
>gb|AC168309.2| Mus musculus chromosome 1, clone wi1-2866I16, complete sequence Length = 40737 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 187 gatgacacgatgacacttgcttgatttc 214 ||||||| ||||||| |||||||||||| Sbjct: 2691 gatgacatgatgacaattgcttgatttc 2664
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 337 ggcggcgatggcggcgccggcgaa 360 |||||||||||||||| ||||||| Sbjct: 136250 ggcggcgatggcggcggcggcgaa 136273
>gb|DQ195081.1| Oryza sativa (indica cultivar-group) putative leucine-rich repeat receptor-like kinase gene cluster, complete sequence; ternary complex factor MIP1-like gene, complete cds; putative membrane-associated protein and gag-pol precursor, pseudogenes, complete sequence; and unknown genes Length = 94077 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 cgagggcggcgatggcggcg 352 |||||||||||||||||||| Sbjct: 48532 cgagggcggcgatggcggcg 48551
>gb|AC103551.7| Oryza sativa chromosome 3 BAC OSJNBb0058G04 genomic sequence, complete sequence Length = 137709 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 337 ggcggcgatggcggcgccggcgaagggg 364 |||||||||||||||| |||||| |||| Sbjct: 88824 ggcggcgatggcggcggcggcgaggggg 88851
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 cggcgatggcggcgccggcg 358 |||||||||||||||||||| Sbjct: 3793448 cggcgatggcggcgccggcg 3793467 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 cggcgatggcggcgccggcg 358 |||||||||||||||||||| Sbjct: 1489653 cggcgatggcggcgccggcg 1489634 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 cggcgatggcggcgccggcg 358 |||||||||||||||||||| Sbjct: 625314 cggcgatggcggcgccggcg 625333
>ref|XM_363999.1| Magnaporthe grisea 70-15 hypothetical protein (MG08844.4) partial cds Length = 702 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 335 agggcggcgatggcggcgccggcgaagg 362 ||||||||||||||| ||| |||||||| Sbjct: 59 agggcggcgatggcgccgcgggcgaagg 86
>gb|AC145376.3| Pan troglodytes BAC clone RP43-59A12 from 7, complete sequence Length = 221727 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 gatgacacgatgacacttgc 206 |||||||||||||||||||| Sbjct: 108005 gatgacacgatgacacttgc 107986
>ref|XM_656638.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4126.2), mRNA Length = 1515 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 cggcgatggcggcgccggcg 358 |||||||||||||||||||| Sbjct: 691 cggcgatggcggcgccggcg 672
>gb|AY756174.4| Oryza rufipogon putative leucine-rich repeat receptor-like kinases and ternary complex factor MIP1-like genes, complete cds; retrotransposon putative membrane-associated protein and gag-pol precursor, pseudogenes, complete sequence; and unknown genes Length = 102522 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 cgagggcggcgatggcggcg 352 |||||||||||||||||||| Sbjct: 56943 cgagggcggcgatggcggcg 56962
>gb|AC102374.7| Mus musculus chromosome 1, clone RP23-278G2, complete sequence Length = 170448 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 187 gatgacacgatgacacttgcttgatttc 214 ||||||| ||||||| |||||||||||| Sbjct: 25899 gatgacatgatgacaattgcttgatttc 25926
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 ggcggcgatggcggcgccgg 356 |||||||||||||||||||| Sbjct: 2915284 ggcggcgatggcggcgccgg 2915265 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 ggcggcgatggcggcgccgg 356 |||||||||||||||||||| Sbjct: 1997572 ggcggcgatggcggcgccgg 1997591
>gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genomic sequence, complete sequence Length = 122815 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 337 ggcggcgatggcggcgccggcgaagggg 364 |||||||||||||| | ||||||||||| Sbjct: 16418 ggcggcgatggcgggggcggcgaagggg 16445
>ref|XM_543677.2| PREDICTED: Canis familiaris similar to Aquaporin 5 (LOC486551), mRNA Length = 1556 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 402 tgaccacggcggggccgaaggagacggcggggttcatgga 441 ||||||| ||||||||||| ||| ||| ||||||||||| Sbjct: 802 tgaccactgcggggccgaaagagcgggccgggttcatgga 763
>ref|XM_386515.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG06339.1) partial mRNA Length = 1497 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gcatggatgatcagaagaga 255 |||||||||||||||||||| Sbjct: 773 gcatggatgatcagaagaga 792
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 gggcggcgatggcggcgccg 355 |||||||||||||||||||| Sbjct: 734071 gggcggcgatggcggcgccg 734052
>emb|AL355472.19| Human DNA sequence from clone RP5-827C21 on chromosome 1 Contains a ribosomal protein S15 (RPS15) pseudogene, three novel genes (LOC388753), the 3' end of the TARBP1 gene for TAR (HIV) RNA binding protein 1 and a CpG island, complete sequence Length = 92628 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 acaagagattattcctgactgact 121 ||||||| |||||||||||||||| Sbjct: 68131 acaagagcttattcctgactgact 68108
>gb|AC090498.4| Homo sapiens chromosome 7 clone RP11-84E17, complete sequence Length = 188036 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 gatgacacgatgacacttgc 206 |||||||||||||||||||| Sbjct: 67930 gatgacacgatgacacttgc 67911
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 333 cgagggcggcgatggcggcgccgg 356 |||| ||||||||||||||||||| Sbjct: 446204 cgagcgcggcgatggcggcgccgg 446227
>gb|AC083905.20| Homo sapiens 3 BAC RP11-124N24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 109471 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 actgatgacacgatgacact 203 |||||||||||||||||||| Sbjct: 67496 actgatgacacgatgacact 67515
>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii Length = 2037969 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 atggatgatcagaagagatt 257 |||||||||||||||||||| Sbjct: 1044394 atggatgatcagaagagatt 1044413
>emb|BX842582.1| Mycobacterium tuberculosis H37Rv complete genome; segment 11/13 Length = 349563 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 cggcgatggcggcgccggcg 358 |||||||||||||||||||| Sbjct: 334910 cggcgatggcggcgccggcg 334929
>emb|BX842576.1| Mycobacterium tuberculosis H37Rv complete genome; segment 5/13 Length = 348264 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 cggcgatggcggcgccggcg 358 |||||||||||||||||||| Sbjct: 105396 cggcgatggcggcgccggcg 105377
>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13 Length = 342416 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 cggcgatggcggcgccggcg 358 |||||||||||||||||||| Sbjct: 281956 cggcgatggcggcgccggcg 281975
>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14 Length = 316050 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 cggcgatggcggcgccggcg 358 |||||||||||||||||||| Sbjct: 3841 cggcgatggcggcgccggcg 3860
>emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 2/14 Length = 324050 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 cggcgatggcggcgccggcg 358 |||||||||||||||||||| Sbjct: 282106 cggcgatggcggcgccggcg 282125
>emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 5/14 Length = 299450 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 cggcgatggcggcgccggcg 358 |||||||||||||||||||| Sbjct: 171874 cggcgatggcggcgccggcg 171855
>emb|AL954726.31| Zebrafish DNA sequence from clone CH211-274A9 in linkage group 23, complete sequence Length = 164507 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 tttgtacaaacattaatctt 54 |||||||||||||||||||| Sbjct: 115044 tttgtacaaacattaatctt 115063
>gb|AC010068.8| Drosophila melanogaster 3L BAC RP98-15K24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 178607 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 cgatggcggcgccggcgaag 361 |||||||||||||||||||| Sbjct: 152620 cgatggcggcgccggcgaag 152601
>gb|AC010011.5| Drosophila melanogaster 3L BAC RP98-17D14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167026 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 cgatggcggcgccggcgaag 361 |||||||||||||||||||| Sbjct: 1301 cgatggcggcgccggcgaag 1282
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 cgagggcggcgatggcggcg 352 |||||||||||||||||||| Sbjct: 2205798 cgagggcggcgatggcggcg 2205779
>ref|NM_141113.2| Drosophila melanogaster CG7442-RA (CG7442), mRNA Length = 2085 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 cgatggcggcgccggcgaag 361 |||||||||||||||||||| Sbjct: 1815 cgatggcggcgccggcgaag 1796
>gb|AY027524.1| Frankia sp. CpI1 plasmid pFQ12, complete plasmid sequence Length = 22437 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 cggcgatggcggcgccggcg 358 |||||||||||||||||||| Sbjct: 8376 cggcgatggcggcgccggcg 8357
>gb|AC160030.4| Mus musculus 10 BAC RP24-311K18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 162351 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 attgctaggacagacagcag 33 |||||||||||||||||||| Sbjct: 21479 attgctaggacagacagcag 21460
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 cggcgatggcggcgccggcg 358 |||||||||||||||||||| Sbjct: 12313580 cggcgatggcggcgccggcg 12313599
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 ggcggcgatggcggcgccgg 356 |||||||||||||||||||| Sbjct: 2262773 ggcggcgatggcggcgccgg 2262792
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 cgagggcggcgatggcggcg 352 |||||||||||||||||||| Sbjct: 2927635 cgagggcggcgatggcggcg 2927616
>gb|BC093081.1| Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, transcript variant 1, mRNA (cDNA clone MGC:111493 IMAGE:30407786), complete cds Length = 3990 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 337 ggcggcgatggcggcgccggcgaagggg 364 ||||||| |||||||| ||||||||||| Sbjct: 14 ggcggcggtggcggcggcggcgaagggg 41
>dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431F01 Length = 143209 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 413 gggccgaaggagacggcggggttcatggacgcgccg 448 |||||||||||| ||| ||||||||||| |||||| Sbjct: 98901 gggccgaaggagcgggccgggttcatggaggcgccg 98866
>gb|AF275315.1|AF275315 Lotus japonicus water-selective transport intrinsic membrane protein 1 mRNA, complete cds Length = 1162 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 407 acggcggggccgaaggagacggcggggttcatggacgcgccgtc 450 ||||| || ||||| || ||||||||||||||||| || ||||| Sbjct: 679 acggctggtccgaatgacacggcggggttcatggatgctccgtc 636
>dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0547F09 Length = 140615 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 ggcggcgatggcggcgccgg 356 |||||||||||||||||||| Sbjct: 110653 ggcggcgatggcggcgccgg 110672 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 ggcggcgatggcggcgccgg 356 |||||||||||||||||||| Sbjct: 67930 ggcggcgatggcggcgccgg 67911
>dbj|AP007224.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0463E12 Length = 161081 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 cgagggcggcgatggcggcg 352 |||||||||||||||||||| Sbjct: 53274 cgagggcggcgatggcggcg 53255
>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1168F12 Length = 141524 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 cggcgatggcggcgccggcg 358 |||||||||||||||||||| Sbjct: 97134 cggcgatggcggcgccggcg 97153
>dbj|AP005542.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0473D02 Length = 146185 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 ggcggcgatggcggcgccgg 356 |||||||||||||||||||| Sbjct: 10272 ggcggcgatggcggcgccgg 10291
>dbj|AP003911.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1368_G08 Length = 107074 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 ggcggcgatggcggcgccgg 356 |||||||||||||||||||| Sbjct: 60900 ggcggcgatggcggcgccgg 60919
>ref|XM_314891.2| Anopheles gambiae str. PEST ENSANGP00000012352 (ENSANGG00000009863), partial mRNA Length = 936 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 370 ccagtacacccagtggttctccca 393 |||||||||||||||||| ||||| Sbjct: 285 ccagtacacccagtggttgtccca 262
>gb|AC009999.2|T20M3 Sequence of BAC T20M3 from Arabidopsis thaliana chromosome 1, complete sequence Length = 79554 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 gtacaaacattaatcttgac 57 |||||||||||||||||||| Sbjct: 5058 gtacaaacattaatcttgac 5039
>dbj|AK073605.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048N16, full insert sequence Length = 1059 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 337 ggcggcgatggcggcgccggcgaa 360 |||||||||||||||| ||||||| Sbjct: 54 ggcggcgatggcggcggcggcgaa 77
>dbj|AK069192.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007E01, full insert sequence Length = 1112 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 413 gggccgaaggagacggcggggttcatggacgcgccg 448 |||||||||||| ||| ||||||||||| |||||| Sbjct: 611 gggccgaaggagcgggccgggttcatggaggcgccg 576
>dbj|AK060994.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E02, full insert sequence Length = 870 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 273 agtactcggcggtggggagctgctcgtg 300 |||| |||| |||||||||||||||||| Sbjct: 674 agtagtcggtggtggggagctgctcgtg 647
>gb|AE003596.5| Drosophila melanogaster chromosome 3L, section 77 of 83 of the complete sequence Length = 249021 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 cgatggcggcgccggcgaag 361 |||||||||||||||||||| Sbjct: 63668 cgatggcggcgccggcgaag 63649
>gb|BT001724.1| Drosophila melanogaster RE69557 full insert cDNA Length = 2096 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 cgatggcggcgccggcgaag 361 |||||||||||||||||||| Sbjct: 1815 cgatggcggcgccggcgaag 1796
>emb|AL935066.2|CNS08CCI Oryza sativa chromosome 12, . BAC OSJNBa0005P03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162200 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 331 gacgagggcggcgatggcggcgccggcg 358 ||||| |||||||||||||||| ||||| Sbjct: 72688 gacgacggcggcgatggcggcggcggcg 72715
>dbj|AP004479.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT03H13, TM0012b, complete sequence Length = 41820 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 407 acggcggggccgaaggagacggcggggttcatggacgcgccgtc 450 ||||| || ||||| || ||||||||||||||||| || ||||| Sbjct: 10117 acggctggtccgaatgacacggcggggttcatggatgctccgtc 10160
>gb|DQ202710.1| Olea europaea tonoplast intrinsic protein (tip) mRNA, complete cds Length = 1064 Score = 40.1 bits (20), Expect = 6.1 Identities = 65/80 (81%) Strand = Plus / Minus Query: 362 gggccgagccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaag 421 |||||||||||||| ||||||||| | ||||| | |||||| || || ||||| || Sbjct: 763 gggccgagccagtagacccagtggctgtcccatgtccagctgacgacagcagggccaaaa 704 Query: 422 gagacggcggggttcatgga 441 || ||||| ||||||||||| Sbjct: 703 gacacggctgggttcatgga 684
>dbj|D10335.1|RICADKB Oryza sativa mRNA for adenylate kinase-b, complete cds Length = 1085 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 337 ggcggcgatggcggcgccggcgaa 360 |||||||||||||||| ||||||| Sbjct: 86 ggcggcgatggcggcggcggcgaa 109 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,899,031 Number of Sequences: 3902068 Number of extensions: 3899031 Number of successful extensions: 93299 Number of sequences better than 10.0: 177 Number of HSP's better than 10.0 without gapping: 193 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 90288 Number of HSP's gapped (non-prelim): 3006 length of query: 452 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 430 effective length of database: 17,147,199,772 effective search space: 7373295901960 effective search space used: 7373295901960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
