ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart56a03 |
|---|---|
| Clone Library Name | barley_pub |
>PSNB_ARATH (Q9SIK7) Presenilin-like protein At2g29900| Length = 397 Score = 129 bits (323), Expect = 6e-30 Identities = 65/103 (63%), Positives = 75/103 (72%) Frame = -3 Query: 505 DDDDTDEDAFGLASSGAIKLGLGDFIFYSVLVGRAAMYDYMTVYACYXXXXXXXXXXXXX 326 ++ +T + GL SSGAIKLGLGDFIFYSVLVGRAAMYD MTVYACY Sbjct: 295 ENSETFLEGIGLGSSGAIKLGLGDFIFYSVLVGRAAMYDLMTVYACYLAIIAGLGITLML 354 Query: 325 XAFYRKALPALPVSISLGVLFYVLTRTLLEAFVMQCSTNFLMF 197 + Y+KALPALPVSI LGV+FY L R LLE FV+QCS+N +MF Sbjct: 355 LSVYQKALPALPVSIMLGVVFYFLARLLLEVFVVQCSSNLVMF 397
>PSNA_ARATH (O64668) Presenilin-like protein At1g08700| Length = 453 Score = 110 bits (275), Expect = 2e-24 Identities = 60/108 (55%), Positives = 69/108 (63%), Gaps = 8/108 (7%) Frame = -3 Query: 496 DTDEDAFGLASSG--------AIKLGLGDFIFYSVLVGRAAMYDYMTVYACYXXXXXXXX 341 D E+A GL S IKLGLGDFIFYSVLVGRAAMYD MTVYACY Sbjct: 346 DNREEARGLEESDNVVDISNRGIKLGLGDFIFYSVLVGRAAMYDLMTVYACYLAIISGLG 405 Query: 340 XXXXXXAFYRKALPALPVSISLGVLFYVLTRTLLEAFVMQCSTNFLMF 197 + Y +ALPALP+SI LGV+FY LTR L+E FV+ +TN +MF Sbjct: 406 CTLILLSVYNRALPALPISIMLGVVFYFLTRLLMEPFVVGVTTNLMMF 453
>PSN_CAEEL (P52166) Presenilin sel-12| Length = 444 Score = 77.8 bits (190), Expect = 2e-14 Identities = 40/87 (45%), Positives = 55/87 (63%), Gaps = 1/87 (1%) Frame = -3 Query: 454 IKLGLGDFIFYSVLVGRAAMY-DYMTVYACYXXXXXXXXXXXXXXAFYRKALPALPVSIS 278 +KLGLGDFIFYSVL+G+A+ Y D+ T ACY A +++ALPALP+SI Sbjct: 358 VKLGLGDFIFYSVLLGKASSYFDWNTTIACYVAILIGLCFTLVLLAVFKRALPALPISIF 417 Query: 277 LGVLFYVLTRTLLEAFVMQCSTNFLMF 197 G++FY TR ++ FV Q S L++ Sbjct: 418 SGLIFYFCTRWIITPFVTQVSQKCLLY 444
>PSN_DROME (O02194) Presenilin homolog (EC 3.4.23.-) (dPS) (DmPS)| Length = 541 Score = 71.6 bits (174), Expect = 1e-12 Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 1/81 (1%) Frame = -3 Query: 454 IKLGLGDFIFYSVLVGRAAMY-DYMTVYACYXXXXXXXXXXXXXXAFYRKALPALPVSIS 278 IKLGLGDFIFYSVLVG+A+ Y D+ T AC+ A +RKALPALP+SI+ Sbjct: 455 IKLGLGDFIFYSVLVGKASSYGDWTTTIACFVAILIGLCLTLLLLAIWRKALPALPISIT 514 Query: 277 LGVLFYVLTRTLLEAFVMQCS 215 G++F T +++ F+ S Sbjct: 515 FGLIFCFATSAVVKPFMEDLS 535
>PSN1_CHICK (Q4JIM4) Presenilin-1 (EC 3.4.23.-) (PS-2) [Contains: Presenilin-1| NTF subunit; Presenilin-1 CTF subunit] Length = 468 Score = 71.2 bits (173), Expect = 1e-12 Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 3/81 (3%) Frame = -3 Query: 454 IKLGLGDFIFYSVLVGRA---AMYDYMTVYACYXXXXXXXXXXXXXXAFYRKALPALPVS 284 +KLGLGDFIFYSVLVG+A A D+ T AC+ A ++KALPALP+S Sbjct: 380 VKLGLGDFIFYSVLVGKASATASGDWNTTLACFVAILIGLCLTLLLLAIFKKALPALPIS 439 Query: 283 ISLGVLFYVLTRTLLEAFVMQ 221 I+ G++FY T L++ F+ Q Sbjct: 440 ITFGLVFYFATDNLVQPFMDQ 460
>PSN1_BOVIN (Q9XT97) Presenilin-1 (EC 3.4.23.-) (PS-1) [Contains: Presenilin-1| NTF subunit; Presenilin-1 CTF subunit; Presenilin-1 CTF12 (PS1-CTF12)] Length = 478 Score = 71.2 bits (173), Expect = 1e-12 Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 3/81 (3%) Frame = -3 Query: 454 IKLGLGDFIFYSVLVGRA---AMYDYMTVYACYXXXXXXXXXXXXXXAFYRKALPALPVS 284 +KLGLGDFIFYSVLVG+A A D+ T AC+ A ++KALPALPVS Sbjct: 390 VKLGLGDFIFYSVLVGKASATASGDWNTTIACFVAILIGLCLTLLLLAIFKKALPALPVS 449 Query: 283 ISLGVLFYVLTRTLLEAFVMQ 221 I+ G++FY T L++ F+ Q Sbjct: 450 ITFGLIFYFATDYLVQPFMDQ 470
>PSN2_BRARE (Q90ZE4) Presenilin-2 (EC 3.4.23.-) (PS2) (Zf-PS2) (Pre2)| Length = 441 Score = 71.2 bits (173), Expect = 1e-12 Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 2/94 (2%) Frame = -3 Query: 502 DDDTDEDAFGLASSGAIKLGLGDFIFYSVLVGRAAMY--DYMTVYACYXXXXXXXXXXXX 329 ++D +ED +KLGLGDFIFYSVLVG+AA D+ T AC+ Sbjct: 345 EEDLEEDR-------GVKLGLGDFIFYSVLVGKAAATGGDWNTTLACFVAILIGLCLTLL 397 Query: 328 XXAFYRKALPALPVSISLGVLFYVLTRTLLEAFV 227 A ++KALPALP+SI+ G++FY T L+ F+ Sbjct: 398 LLAIFKKALPALPISITFGLVFYFSTDNLVRPFM 431
>PSN1_RAT (P97887) Presenilin-1 (EC 3.4.23.-) (PS-1) (Protein S182)| [Contains: Presenilin-1 NTF subunit; Presenilin-1 CTF subunit; Presenilin-1 CTF12 (PS1-CTF12)] Length = 468 Score = 70.9 bits (172), Expect = 2e-12 Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 3/81 (3%) Frame = -3 Query: 454 IKLGLGDFIFYSVLVGRA---AMYDYMTVYACYXXXXXXXXXXXXXXAFYRKALPALPVS 284 +KLGLGDFIFYSVLVG+A A D+ T AC+ A ++KALPALP+S Sbjct: 380 VKLGLGDFIFYSVLVGKASATASGDWNTTIACFVAILIGLCLTLLLLAIFKKALPALPIS 439 Query: 283 ISLGVLFYVLTRTLLEAFVMQ 221 I+ G++FY T L++ F+ Q Sbjct: 440 ITFGLIFYFATDYLVQPFMDQ 460
>PSN1_XENLA (O12976) Presenilin-1 (EC 3.4.23.-) (Presenilin alpha) (PS-alpha)| Length = 433 Score = 70.5 bits (171), Expect = 2e-12 Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 3/81 (3%) Frame = -3 Query: 454 IKLGLGDFIFYSVLVGRA---AMYDYMTVYACYXXXXXXXXXXXXXXAFYRKALPALPVS 284 +KLGLGDFIFYSVLVG+A A D+ T AC+ A ++KALPALP+S Sbjct: 345 VKLGLGDFIFYSVLVGKASATASGDWNTTLACFVAILIGLCLTLLLLAIFKKALPALPIS 404 Query: 283 ISLGVLFYVLTRTLLEAFVMQ 221 I+ G++FY T L++ F+ Q Sbjct: 405 ITFGLVFYFATDYLVQPFMDQ 425
>PSN1_CANFA (Q6RH31) Presenilin-1 (EC 3.4.23.-) (PS-1) [Contains: Presenilin-1| NTF subunit; Presenilin-1 CTF subunit; Presenilin-1 CTF12 (PS1-CTF12)] Length = 466 Score = 70.5 bits (171), Expect = 2e-12 Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 3/81 (3%) Frame = -3 Query: 454 IKLGLGDFIFYSVLVGRA---AMYDYMTVYACYXXXXXXXXXXXXXXAFYRKALPALPVS 284 +KLGLGDFIFYSVLVG+A A D+ T AC+ A ++KALPALP+S Sbjct: 378 VKLGLGDFIFYSVLVGKASATASGDWNTTIACFVAILIGLCLTLLLLAIFKKALPALPIS 437 Query: 283 ISLGVLFYVLTRTLLEAFVMQ 221 I+ G++FY T L++ F+ Q Sbjct: 438 ITFGLVFYFATDYLVQPFMDQ 458
>PSN1_PONPY (Q5R780) Presenilin-1 (EC 3.4.23.-) (PS-1) [Contains: Presenilin-1| NTF subunit; Presenilin-1 CTF subunit; Presenilin-1 CTF12 (PS1-CTF12)] Length = 467 Score = 70.5 bits (171), Expect = 2e-12 Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 3/81 (3%) Frame = -3 Query: 454 IKLGLGDFIFYSVLVGRA---AMYDYMTVYACYXXXXXXXXXXXXXXAFYRKALPALPVS 284 +KLGLGDFIFYSVLVG+A A D+ T AC+ A ++KALPALP+S Sbjct: 379 VKLGLGDFIFYSVLVGKASATASGDWNTTIACFVAILIGLCLTLLLLAIFKKALPALPIS 438 Query: 283 ISLGVLFYVLTRTLLEAFVMQ 221 I+ G++FY T L++ F+ Q Sbjct: 439 ITFGLVFYFATDYLVQPFMDQ 459
>PSN1_MOUSE (P49769) Presenilin-1 (EC 3.4.23.-) (PS-1) (Protein S182)| [Contains: Presenilin-1 NTF subunit; Presenilin-1 CTF subunit; Presenilin-1 CTF12 (PS1-CTF12)] Length = 467 Score = 70.5 bits (171), Expect = 2e-12 Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 3/81 (3%) Frame = -3 Query: 454 IKLGLGDFIFYSVLVGRA---AMYDYMTVYACYXXXXXXXXXXXXXXAFYRKALPALPVS 284 +KLGLGDFIFYSVLVG+A A D+ T AC+ A ++KALPALP+S Sbjct: 379 VKLGLGDFIFYSVLVGKASATASGDWNTTIACFVAILIGLCLTLLLLAIFKKALPALPIS 438 Query: 283 ISLGVLFYVLTRTLLEAFVMQ 221 I+ G++FY T L++ F+ Q Sbjct: 439 ITFGLVFYFATDYLVQPFMDQ 459
>PSN1_HUMAN (P49768) Presenilin-1 (EC 3.4.23.-) (PS-1) (Protein S182)| [Contains: Presenilin-1 NTF subunit; Presenilin-1 CTF subunit; Presenilin-1 CTF12 (PS1-CTF12)] Length = 467 Score = 70.5 bits (171), Expect = 2e-12 Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 3/81 (3%) Frame = -3 Query: 454 IKLGLGDFIFYSVLVGRA---AMYDYMTVYACYXXXXXXXXXXXXXXAFYRKALPALPVS 284 +KLGLGDFIFYSVLVG+A A D+ T AC+ A ++KALPALP+S Sbjct: 379 VKLGLGDFIFYSVLVGKASATASGDWNTTIACFVAILIGLCLTLLLLAIFKKALPALPIS 438 Query: 283 ISLGVLFYVLTRTLLEAFVMQ 221 I+ G++FY T L++ F+ Q Sbjct: 439 ITFGLVFYFATDYLVQPFMDQ 459
>PSN2_RAT (O88777) Presenilin-2 (EC 3.4.23.-) (PS-2) [Contains: Presenilin-2| NTF subunit; Presenilin-2 CTF subunit] Length = 448 Score = 70.1 bits (170), Expect = 3e-12 Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 3/79 (3%) Frame = -3 Query: 454 IKLGLGDFIFYSVLVGRAAMY---DYMTVYACYXXXXXXXXXXXXXXAFYRKALPALPVS 284 +KLGLGDFIFYSVLVG+AA D+ T AC+ A ++KALPALP+S Sbjct: 360 VKLGLGDFIFYSVLVGKAAATGNGDWSTTLACFIAILIGLCLTLLLLAVFKKALPALPIS 419 Query: 283 ISLGVLFYVLTRTLLEAFV 227 I+ G++FY T L+ F+ Sbjct: 420 ITFGLIFYFSTDNLVRPFM 438
>PSN2_BOVIN (Q9XT96) Presenilin-2 (EC 3.4.23.-) (PS-2) [Contains: Presenilin-2| NTF subunit; Presenilin-2 CTF subunit] Length = 449 Score = 70.1 bits (170), Expect = 3e-12 Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 3/79 (3%) Frame = -3 Query: 454 IKLGLGDFIFYSVLVGRAAMY---DYMTVYACYXXXXXXXXXXXXXXAFYRKALPALPVS 284 +KLGLGDFIFYSVLVG+AA D+ T AC+ A ++KALPALP+S Sbjct: 361 VKLGLGDFIFYSVLVGKAAAMGSGDWNTTLACFVAILIGLCLTLLLLAVFKKALPALPIS 420 Query: 283 ISLGVLFYVLTRTLLEAFV 227 I+ G++FY T L+ F+ Sbjct: 421 ITFGLIFYFSTDNLVRPFM 439
>PSN1_MICMU (P79802) Presenilin-1 (EC 3.4.23.-) (PS-1) [Contains: Presenilin-1| NTF subunit; Presenilin-1 CTF subunit; Presenilin-1 CTF12 (PS1-CTF12)] Length = 467 Score = 70.1 bits (170), Expect = 3e-12 Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 3/81 (3%) Frame = -3 Query: 454 IKLGLGDFIFYSVLVGRA---AMYDYMTVYACYXXXXXXXXXXXXXXAFYRKALPALPVS 284 +KLGLGDF+FYSVLVG+A A D+ T AC+ A ++KALPALP+S Sbjct: 379 VKLGLGDFVFYSVLVGKASATASGDWNTTIACFVAILIGLCLTLLLLAIFKKALPALPIS 438 Query: 283 ISLGVLFYVLTRTLLEAFVMQ 221 I+ G++FY T L++ F+ Q Sbjct: 439 ITFGLVFYFATDYLVQPFMDQ 459
>PSN1_MACFA (Q8HXW5) Presenilin-1 (EC 3.4.23.-) (PS-1) [Contains: Presenilin-1| NTF subunit; Presenilin-1 CTF subunit; Presenilin-1 CTF12 (PS1-CTF12)] Length = 467 Score = 70.1 bits (170), Expect = 3e-12 Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 3/81 (3%) Frame = -3 Query: 454 IKLGLGDFIFYSVLVGRA---AMYDYMTVYACYXXXXXXXXXXXXXXAFYRKALPALPVS 284 +KLGLGDFIFYSVLVG+A A D+ T AC+ A ++KALPALP+S Sbjct: 379 VKLGLGDFIFYSVLVGKASATASGDWNTTIACFVAILIGLCLTLLLLAIFKKALPALPIS 438 Query: 283 ISLGVLFYVLTRTLLEAFVMQ 221 I+ G++FY T L++ F+ Q Sbjct: 439 ITFGLVFYSATDYLVQPFMDQ 459
>PSN1_BRARE (Q9W6T7) Presenilin-1 (EC 3.4.23.-) (PS1) (Zf-PS1)| Length = 456 Score = 69.7 bits (169), Expect = 4e-12 Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 3/85 (3%) Frame = -3 Query: 454 IKLGLGDFIFYSVLVGRA---AMYDYMTVYACYXXXXXXXXXXXXXXAFYRKALPALPVS 284 +KLGLGDFIFYS+LVG+A A D+ T AC+ A ++KALPALP+S Sbjct: 368 VKLGLGDFIFYSMLVGKASATASGDWNTTLACFVAILIGLCLTLLLLAIFKKALPALPIS 427 Query: 283 ISLGVLFYVLTRTLLEAFVMQCSTN 209 I+ G++FY T L+ F+ Q + + Sbjct: 428 ITFGLVFYFATDNLVRPFMDQLAVH 452
>PSN2_MOUSE (Q61144) Presenilin-2 (EC 3.4.23.-) (PS-2) [Contains: Presenilin-2| NTF subunit; Presenilin-2 CTF subunit] Length = 448 Score = 69.7 bits (169), Expect = 4e-12 Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 3/79 (3%) Frame = -3 Query: 454 IKLGLGDFIFYSVLVGRAAMY---DYMTVYACYXXXXXXXXXXXXXXAFYRKALPALPVS 284 +KLGLGDFIFYSVLVG+AA D+ T AC+ A ++KALPALP+S Sbjct: 360 VKLGLGDFIFYSVLVGKAAATGNGDWNTTLACFIAILIGLCLTLLLLAVFKKALPALPIS 419 Query: 283 ISLGVLFYVLTRTLLEAFV 227 I+ G++FY T L+ F+ Sbjct: 420 ITFGLIFYFSTDNLVRPFM 438
>PSN2_HUMAN (P49810) Presenilin-2 (EC 3.4.23.-) (PS-2) (STM-2) (E5-1) (AD3LP)| (AD5) [Contains: Presenilin-2 NTF subunit; Presenilin-2 CTF subunit] Length = 448 Score = 69.7 bits (169), Expect = 4e-12 Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 3/79 (3%) Frame = -3 Query: 454 IKLGLGDFIFYSVLVGRAAMY---DYMTVYACYXXXXXXXXXXXXXXAFYRKALPALPVS 284 +KLGLGDFIFYSVLVG+AA D+ T AC+ A ++KALPALP+S Sbjct: 360 VKLGLGDFIFYSVLVGKAAATGSGDWNTTLACFVAILIGLCLTLLLLAVFKKALPALPIS 419 Query: 283 ISLGVLFYVLTRTLLEAFV 227 I+ G++FY T L+ F+ Sbjct: 420 ITFGLIFYFSTDNLVRPFM 438
>PSN2_MICMU (P79801) Presenilin-2 (EC 3.4.23.-) (PS-2) [Contains: Presenilin-2| NTF subunit; Presenilin-2 CTF subunit] (Fragment) Length = 445 Score = 69.3 bits (168), Expect = 6e-12 Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 3/79 (3%) Frame = -3 Query: 454 IKLGLGDFIFYSVLVGRAAMY---DYMTVYACYXXXXXXXXXXXXXXAFYRKALPALPVS 284 +KLGLGDFIFYSVLVG+AA D+ T AC+ A ++KALPALP+S Sbjct: 360 VKLGLGDFIFYSVLVGKAAATGSGDWNTTLACFVAILIGLCLTLLLLAVFKKALPALPIS 419 Query: 283 ISLGVLFYVLTRTLLEAFV 227 I+ G++FY T L+ F+ Sbjct: 420 ITFGLVFYFSTDNLVRPFM 438
>PSN2_XENLA (O12977) Presenilin-2 (EC 3.4.23.-) (Presenilin beta) (PS-beta)| Length = 449 Score = 69.3 bits (168), Expect = 6e-12 Identities = 39/94 (41%), Positives = 54/94 (57%), Gaps = 3/94 (3%) Frame = -3 Query: 499 DDTDEDAFGLASSGAIKLGLGDFIFYSVLVGRAAMY---DYMTVYACYXXXXXXXXXXXX 329 +D DE+ +KLGLGDFIFYSVLVG+AA D+ T AC+ Sbjct: 353 EDPDEER-------GVKLGLGDFIFYSVLVGKAAATASGDWNTTLACFVAILIGLCLTLL 405 Query: 328 XXAFYRKALPALPVSISLGVLFYVLTRTLLEAFV 227 A ++KALPALP+SI+ G++FY T ++ F+ Sbjct: 406 LLAVFKKALPALPISITFGLIFYFSTDNIVRPFM 439
>PSN2_CHICK (Q90X07) Presenilin-2 (EC 3.4.23.-) (PS-2) [Contains: Presenilin-2| NTF subunit; Presenilin-2 CTF subunit] Length = 451 Score = 62.4 bits (150), Expect = 7e-10 Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 3/83 (3%) Frame = -3 Query: 454 IKLGLGDFIFYSVLVGRAAMY---DYMTVYACYXXXXXXXXXXXXXXAFYRKALPALPVS 284 +KLGLGDFIFYSVLVG+AA D+ T A A ++KALPALP+S Sbjct: 368 VKLGLGDFIFYSVLVGKAAATPSGDWNTTLAXXVAILIGLCLTLLLLAVFKKALPALPIS 427 Query: 283 ISLGVLFYVLTRTLLEAFVMQCS 215 I+ G++FY T L+ ++ S Sbjct: 428 ITFGLIFYFSTDNLVRTDPLEIS 450
>HOP1_CAEEL (O02100) Presenilin hop-1| Length = 358 Score = 53.1 bits (126), Expect = 4e-07 Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%) Frame = -3 Query: 460 GAIKLGLGDFIFYSVLVGRAAMYDYM-TVYACYXXXXXXXXXXXXXXAFYRKALPALPVS 284 G I+LG+GDF+FYS+++G + TV AC+ + ALPALP Sbjct: 270 GTIRLGMGDFVFYSLMLGNTVQTCPLPTVVACFVSNLVGLTITLPIVTLSQTALPALPFP 329 Query: 283 ISLGVLFYVLTRTLLEAFVMQCSTNFLM 200 +++ +FY + L F C++ ++ Sbjct: 330 LAIAAIFYFSSHIALTPFTDLCTSQLIL 357
>SPE4_CAEEL (Q01608) Presenilin spe-4| Length = 465 Score = 33.9 bits (76), Expect = 0.26 Identities = 14/28 (50%), Positives = 20/28 (71%) Frame = -3 Query: 481 AFGLASSGAIKLGLGDFIFYSVLVGRAA 398 A L ++LG GDF+FYS+L+G+AA Sbjct: 379 ADALNDGEVLRLGFGDFVFYSLLIGQAA 406
>ZN265_MOUSE (Q9R020) Zinc finger protein 265 (Zinc finger, splicing) (Fragment)| Length = 326 Score = 32.3 bits (72), Expect = 0.75 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 5/55 (9%) Frame = -2 Query: 356 HCGARHHSATAGILPQGIARTTGVHLPR-----RSVLRAHKNIARGICYAVLHKL 207 H G+R HS + G + +R+TG LP+ R + K RG+ +LH+L Sbjct: 242 HSGSREHSRSRGSKSRSSSRSTGALLPQEKDLIRVLRHLLKETGRGVALDLLHQL 296
>ZN265_RAT (O35986) Zinc finger protein 265 (Zinc finger, splicing)| Length = 332 Score = 32.0 bits (71), Expect = 0.98 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 5/55 (9%) Frame = -2 Query: 356 HCGARHHSATAGILPQGIARTTGVHLPR-----RSVLRAHKNIARGICYAVLHKL 207 H G+R HS + G + +R+TG LP+ R + K RG+ +LH+L Sbjct: 242 HSGSREHSRSRGSKSRSSSRSTGALLPQEKDLTRVLHHLLKETGRGVALDLLHQL 296
>PEX10_ARATH (Q9SYU4) Peroxisome assembly protein 10 (Peroxin-10) (AthPEX10)| (Pex10p) (PER8) Length = 381 Score = 31.6 bits (70), Expect = 1.3 Identities = 28/93 (30%), Positives = 36/93 (38%), Gaps = 5/93 (5%) Frame = -1 Query: 441 WETSYSTACSSGGR--LCTTT*QSTLATLPSLRGSASLCYCWHSTARHCPHYRCPSPSAF 268 W TS ST+ + G+ LC +T Q H TA C H F Sbjct: 313 WSTSDSTSTEAVGKCTLCLSTRQ-------------------HPTATPCGH-------VF 346 Query: 267 CFTCSQEHCSRHL---LCSAPQTF*CFSIPCLY 178 C++C E C+ LC P T S+ CLY Sbjct: 347 CWSCIMEWCNEKQECPLCRTPNTH--SSLVCLY 377
>RECA_MYCTH (Q9F407) Protein recA (Recombinase A) [Contains: Mth recA intein]| (Fragment) Length = 424 Score = 30.0 bits (66), Expect = 3.7 Identities = 19/50 (38%), Positives = 23/50 (46%) Frame = -2 Query: 470 GLIRGNQAWAGRLHILQRARREGGYVRLHDSLRLLPCHHCGARHHSATAG 321 GL +G +GR+ I A EG +RL D LR H R A AG Sbjct: 236 GLQQGTAGGSGRIEICVEAMTEGSRIRLRDHLR--DTHGLDVRLRQAGAG 283
>ZG53_XENLA (P18728) Gastrula zinc finger protein XLCGF53.1 (Fragment)| Length = 516 Score = 30.0 bits (66), Expect = 3.7 Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 9/67 (13%) Frame = -2 Query: 407 EGGYVRLHDSLRLLPCHHCGAR---------HHSATAGILPQGIARTTGVHLPRRSVLRA 255 E Y R+H + PC CG R H S+ G P ++ + P RS L Sbjct: 341 EHAYGRIHTEEKPFPCSECGKRFARRQHLTDHQSSHTGEKPYACSQCE-KYFPHRSNLNR 399 Query: 254 HKNIARG 234 H + +G Sbjct: 400 HLKLHKG 406
>ASF2_HELAN (P22184) Anther-specific protein SF2 precursor| Length = 121 Score = 29.6 bits (65), Expect = 4.9 Identities = 16/41 (39%), Positives = 20/41 (48%) Frame = +2 Query: 206 KVCGALHNKCLEQCSCEHVKQNAEGDGHR*CGQCLAVECQQ 328 +V H KC E+ EH K N + + G CL VE QQ Sbjct: 31 RVTNLYHEKCDEKQCTEHCKTNEKAES----GYCLVVEKQQ 67
>IE61_VZVD (P09309) Transcriptional repressor IE61 (Immediate-early protein| 61) (IE61) Length = 467 Score = 29.6 bits (65), Expect = 4.9 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Frame = -1 Query: 426 STACSSGGRLCTTT*QSTLATLPSLRGSASLCY-CWHSTARHCPHYRCPSPS 274 S A + +C +T T+P L +C W ST+ CP RCP S Sbjct: 12 SDASDNTCTICMSTVSDLGKTMPCLHDFCFVCIRAWTSTSVQCPLCRCPVQS 63
>NIFB_KLEPN (P10390) FeMo cofactor biosynthesis protein nifB| Length = 468 Score = 29.6 bits (65), Expect = 4.9 Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 2/70 (2%) Frame = -1 Query: 423 TACSS--GGRLCTTT*QSTLATLPSLRGSASLCYCWHSTARHCPHYRCPSPSAFCFTCSQ 250 T+CSS GG+ C S L L + + +A CY H H R P A Sbjct: 2 TSCSSFSGGKACRPADDSALTPLVADKAAAHPCYSRHG---HHRFARMHLPVAPACNLQC 58 Query: 249 EHCSRHLLCS 220 +C+R CS Sbjct: 59 NYCNRKFDCS 68
>INSR_XENLA (Q9PVZ4) Insulin receptor precursor (EC 2.7.10.1) (IR) (Xe-InsR)| (XTK-1b) [Contains: Insulin receptor alpha subunit; Insulin receptor beta subunit] Length = 1362 Score = 28.9 bits (63), Expect = 8.3 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Frame = +2 Query: 197 KHQKVCGALHNKCLEQCSCEHV-KQNAEGDGHR*CGQCLAVEC 322 KH V GAL +C Q C+ V + +G G GQC EC Sbjct: 207 KHTLVNGALVERCWTQDHCQKVCPSDCKGSGCLPDGQCCHPEC 249 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,211,290 Number of Sequences: 219361 Number of extensions: 1620355 Number of successful extensions: 4644 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 4436 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4617 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3696665728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
