>ACU15_NEUCR (P87000) Transcriptional activator protein acu-15|
          Length = 926

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +1

Query: 19  ERIRGLQRNKRSYKILSHTTHHSMDVLLKVHLNRS 123
           ER+R L+   R  K L       +D+L K+H NRS
Sbjct: 72  ERVRALEAEIRELKDLLDEKDEKLDMLSKMHSNRS 106

>CSPG2_BOVIN (P81282) Versican core protein precursor (Large fibroblast|
            proteoglycan) (Chondroitin sulfate proteoglycan core
            protein 2) (PG-M) (Glial hyaluronate-binding protein)
            (GHAP)
          Length = 3381

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
 Frame = +2

Query: 8    PNHMKG--FGGYNATREVTRYSHTPHTIP 88
            P+ ++G  F  Y++T+E T Y  T HTIP
Sbjct: 955  PSDVEGSTFVNYSSTQEPTTYVDTSHTIP 983

>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor|
          Length = 1804

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +1

Query: 88  MDVLLKVHLNRSPCGVSTTQGYTNNDQNAQ 177
           +D+L  +  + SP G+S T G+  N +N++
Sbjct: 38  VDILKALDFHNSPVGISKTTGFCTNRKNSK 67

>MUTS_THEAQ (Q56215) DNA mismatch repair protein mutS|
          Length = 811

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 231 KERPKRVLISSSLKIAEGLFCSIVTKRFPSSLAQAP 338
           + RP  VL++  L +  G F     KRFP  L++AP
Sbjct: 172 RHRPAEVLLAPEL-LENGAFLDEFRKRFPVMLSEAP 206


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,060,807
Number of Sequences: 219361
Number of extensions: 831981
Number of successful extensions: 1814
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1814
length of database: 80,573,946
effective HSP length: 92
effective length of database: 60,392,734
effective search space used: 1449425616
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)