ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart55h02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_474454.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1017 Score = 159 bits (80), Expect = 9e-36 Identities = 155/180 (86%) Strand = Plus / Minus Query: 236 ctgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggcgcggtggcgagc 295 ||||||||| |||||||||||||||||||||||| | | | ||||||| | || || Sbjct: 950 ctgaagcagctgcggcggatctcgccgacgttcctgtcagtcctcggcacattgcttagt 891 Query: 296 ttggccatggacttggcgaactgcgcgaagaaggcgtccttgttccgcgcgaactgctgc 355 ||| ||||||||||||||||||||| |||||||||| |||||| | ||||||||| Sbjct: 890 ttgaccatggacttggcgaactgcgtgaagaaggcggccttgtccgtggcgaactgcctg 831 Query: 356 acgatgggcgccgtggttcggtccttgatgagcaccatgtcggaggtgaagacgccctgg 415 ||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 830 acgatgggcgccgtgatccggtccttgatgagcgccatgtcggaggtgaagacgccctgg 771
>emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207F1 complete genome Length = 124321 Score = 159 bits (80), Expect = 9e-36 Identities = 155/180 (86%) Strand = Plus / Minus Query: 236 ctgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggcgcggtggcgagc 295 ||||||||| |||||||||||||||||||||||| | | | ||||||| | || || Sbjct: 72462 ctgaagcagctgcggcggatctcgccgacgttcctgtcagtcctcggcacattgcttagt 72403 Query: 296 ttggccatggacttggcgaactgcgcgaagaaggcgtccttgttccgcgcgaactgctgc 355 ||| ||||||||||||||||||||| |||||||||| |||||| | ||||||||| Sbjct: 72402 ttgaccatggacttggcgaactgcgtgaagaaggcggccttgtccgtggcgaactgcctg 72343 Query: 356 acgatgggcgccgtggttcggtccttgatgagcaccatgtcggaggtgaagacgccctgg 415 ||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 72342 acgatgggcgccgtgatccggtccttgatgagcgccatgtcggaggtgaagacgccctgg 72283 Score = 129 bits (65), Expect = 8e-27 Identities = 156/181 (86%), Gaps = 4/181 (2%) Strand = Plus / Minus Query: 236 ctgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggcgcggtggc-gag 294 ||||||||| |||||||||||||||||||||||| | | | |||||| | |||| ||| Sbjct: 75769 ctgaagcagctgcggcggatctcgccgacgttcctgtcagtcctcggaacc-tggctgag 75711 Query: 295 cttggccatggacttggcgaactgcgcgaagaaggcgtccttgttccgcg-cgaactgct 353 |||| ||||||||||||||||||||| |||||| ||| |||||| ||||| |||||||| Sbjct: 75710 cttgaccatggacttggcgaactgcgtgaagaatgcggccttgt-ccgcggcgaactgcc 75652 Query: 354 gcacgatgggcgccgtggttcggtccttgatgagcaccatgtcggaggtgaagacgccct 413 ||||| ||||||||| | ||||||||||||||| |||||||||||||||| || |||| Sbjct: 75651 tgacgattggcgccgtgatccggtccttgatgagcgccatgtcggaggtgaacaccccct 75592 Query: 414 g 414 | Sbjct: 75591 g 75591 Score = 83.8 bits (42), Expect = 4e-13 Identities = 144/178 (80%) Strand = Plus / Minus Query: 237 tgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggcgcggtggcgagct 296 ||||||||||||||||||||||||| ||||||||||||||||||| | || |||| Sbjct: 82573 tgaagcagttgcggcggatctcgcctttgttcccgccgggcctcggcaccttgctcagct 82514 Query: 297 tggccatggacttggcgaactgcgcgaagaaggcgtccttgttccgcgcgaactgctgca 356 || | |||||| | ||||||||| |||||||||| |||||| | |||||||| || | Sbjct: 82513 tgacgatggacgtaacgaactgcgtgaagaaggcggccttgtcctgcgcgaaccgcctga 82454 Query: 357 cgatgggcgccgtggttcggtccttgatgagcaccatgtcggaggtgaagacgccctg 414 |||||| ||| || ||||| ||||||| |||||||||||||||| || ||||| Sbjct: 82453 cgatggccgcagtttgggggtccaggatgagcgccatgtcggaggtgaacaccccctg 82396 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 244 gttgcggcggatctcgccgacgttccc 270 ||||||||||||||||||||||||||| Sbjct: 85819 gttgcggcggatctcgccgacgttccc 85793
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 159 bits (80), Expect = 9e-36 Identities = 155/180 (86%) Strand = Plus / Plus Query: 236 ctgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggcgcggtggcgagc 295 ||||||||| |||||||||||||||||||||||| | | | ||||||| | || || Sbjct: 35280772 ctgaagcagctgcggcggatctcgccgacgttcctgtcagtcctcggcacattgcttagt 35280831 Query: 296 ttggccatggacttggcgaactgcgcgaagaaggcgtccttgttccgcgcgaactgctgc 355 ||| ||||||||||||||||||||| |||||||||| |||||| | ||||||||| Sbjct: 35280832 ttgaccatggacttggcgaactgcgtgaagaaggcggccttgtccgtggcgaactgcctg 35280891 Query: 356 acgatgggcgccgtggttcggtccttgatgagcaccatgtcggaggtgaagacgccctgg 415 ||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 35280892 acgatgggcgccgtgatccggtccttgatgagcgccatgtcggaggtgaagacgccctgg 35280951 Score = 149 bits (75), Expect = 9e-33 Identities = 153/179 (85%) Strand = Plus / Plus Query: 238 gaagcagttgcggcggatctcgccgacgttcccgccgggcctcggcgcggtggcgagctt 297 ||||||| |||||||||||||||||||||||||||||||||| || | || |||||| Sbjct: 35250654 gaagcagctgcggcggatctcgccgacgttcccgccgggcctgggtaccttgctgagctt 35250713 Query: 298 ggccatggacttggcgaactgcgcgaagaaggcgtccttgttccgcgcgaactgctgcac 357 | ||||||||||||| ||||| ||||||||||| |||||| | ||||||||||| || Sbjct: 35250714 gaccatggacttggcaaactggtcgaagaaggcggccttgtcctgcgcgaactgcctgac 35250773 Query: 358 gatgggcgccgtggttcggtccttgatgagcaccatgtcggaggtgaagacgccctggc 416 ||||| ||||||||| ||| ||| |||||| |||||||||| |||||||| ||||||| Sbjct: 35250774 gatggacgccgtggtctggttcttcatgagcgccatgtcggaagtgaagacaccctggc 35250832 Score = 113 bits (57), Expect = 5e-22 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 236 ctgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggcgcggtggc-gag 294 ||||||||| |||||||||||||||||||||||| | | | |||||| | |||| ||| Sbjct: 35258058 ctgaagcagctgcggcggatctcgccgacgttcctgtcagtcctcggaacc-tggctgag 35258116 Query: 295 cttggccatggacttggcgaactgcgcgaagaaggcgtccttgttccgc-gcgaactgct 353 |||| |||||||||||||||||||| |||||| ||| ||||| ||||| ||||||||| Sbjct: 35258117 cttgaccatggacttggcgaactgcctgaagaatgcggccttg-tccgcggcgaactgcc 35258175 Query: 354 gcacgatgggcgccgtggttcggtccttgatgagcaccatgtcggaggtgaagacgccct 413 ||||| ||||||||| | ||||||||||||||| |||| ||||||||||| || |||| Sbjct: 35258176 tgacgattggcgccgtgatccggtccttgatgagcgccatatcggaggtgaacaccccct 35258235 Query: 414 g 414 | Sbjct: 35258236 g 35258236 Score = 83.8 bits (42), Expect = 4e-13 Identities = 144/178 (80%) Strand = Plus / Plus Query: 237 tgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggcgcggtggcgagct 296 ||||||||||||||||||||||||| ||||||||||||||||||| | || |||| Sbjct: 35242527 tgaagcagttgcggcggatctcgcctttgttcccgccgggcctcggcaccttgctcagct 35242586 Query: 297 tggccatggacttggcgaactgcgcgaagaaggcgtccttgttccgcgcgaactgctgca 356 || | |||||| | ||||||||| |||||||||| |||||| | |||||||| || | Sbjct: 35242587 tgacgatggacgtaacgaactgcgtgaagaaggcggccttgtcctgcgcgaaccgcctga 35242646 Query: 357 cgatgggcgccgtggttcggtccttgatgagcaccatgtcggaggtgaagacgccctg 414 |||||| ||| || ||||| ||||||| |||||||||||||||| || ||||| Sbjct: 35242647 cgatggccgcagtttgggggtccaggatgagcgccatgtcggaggtgaacaccccctg 35242704 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 295 cttggccatggacttggcgaactgcgcgaagaag 328 |||| ||||||||||||||||||||||||||||| Sbjct: 20964324 cttgaccatggacttggcgaactgcgcgaagaag 20964291 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 244 gttgcggcggatctcgccgacgttccc 270 ||||||||||||||||||||||||||| Sbjct: 35227653 gttgcggcggatctcgccgacgttccc 35227679 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 188 tcctcgccggcctcgacgacg 208 ||||||||||||||||||||| Sbjct: 9331947 tcctcgccggcctcgacgacg 9331967
>dbj|AK073360.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030A01, full insert sequence Length = 1240 Score = 159 bits (80), Expect = 9e-36 Identities = 155/180 (86%) Strand = Plus / Minus Query: 236 ctgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggcgcggtggcgagc 295 ||||||||| |||||||||||||||||||||||| | | | ||||||| | || || Sbjct: 1016 ctgaagcagctgcggcggatctcgccgacgttcctgtcagtcctcggcacattgcttagt 957 Query: 296 ttggccatggacttggcgaactgcgcgaagaaggcgtccttgttccgcgcgaactgctgc 355 ||| ||||||||||||||||||||| |||||||||| |||||| | ||||||||| Sbjct: 956 ttgaccatggacttggcgaactgcgtgaagaaggcggccttgtccgtggcgaactgcctg 897 Query: 356 acgatgggcgccgtggttcggtccttgatgagcaccatgtcggaggtgaagacgccctgg 415 ||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 896 acgatgggcgccgtgatccggtccttgatgagcgccatgtcggaggtgaagacgccctgg 837
>tpe|BN000593.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx64 gene for class III peroxidase 64 precursor, exons 1-2 Length = 1091 Score = 159 bits (80), Expect = 9e-36 Identities = 155/180 (86%) Strand = Plus / Minus Query: 236 ctgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggcgcggtggcgagc 295 ||||||||| |||||||||||||||||||||||| | | | ||||||| | || || Sbjct: 1024 ctgaagcagctgcggcggatctcgccgacgttcctgtcagtcctcggcacattgcttagt 965 Query: 296 ttggccatggacttggcgaactgcgcgaagaaggcgtccttgttccgcgcgaactgctgc 355 ||| ||||||||||||||||||||| |||||||||| |||||| | ||||||||| Sbjct: 964 ttgaccatggacttggcgaactgcgtgaagaaggcggccttgtccgtggcgaactgcctg 905 Query: 356 acgatgggcgccgtggttcggtccttgatgagcaccatgtcggaggtgaagacgccctgg 415 ||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 904 acgatgggcgccgtgatccggtccttgatgagcgccatgtcggaggtgaagacgccctgg 845
>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24, complete sequence Length = 173770 Score = 159 bits (80), Expect = 9e-36 Identities = 155/180 (86%) Strand = Plus / Plus Query: 236 ctgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggcgcggtggcgagc 295 ||||||||| |||||||||||||||||||||||| | | | ||||||| | || || Sbjct: 76617 ctgaagcagctgcggcggatctcgccgacgttcctgtcagtcctcggcacattgcttagt 76676 Query: 296 ttggccatggacttggcgaactgcgcgaagaaggcgtccttgttccgcgcgaactgctgc 355 ||| ||||||||||||||||||||| |||||||||| |||||| | ||||||||| Sbjct: 76677 ttgaccatggacttggcgaactgcgtgaagaaggcggccttgtccgtggcgaactgcctg 76736 Query: 356 acgatgggcgccgtggttcggtccttgatgagcaccatgtcggaggtgaagacgccctgg 415 ||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 76737 acgatgggcgccgtgatccggtccttgatgagcgccatgtcggaggtgaagacgccctgg 76796 Score = 149 bits (75), Expect = 9e-33 Identities = 153/179 (85%) Strand = Plus / Plus Query: 238 gaagcagttgcggcggatctcgccgacgttcccgccgggcctcggcgcggtggcgagctt 297 ||||||| |||||||||||||||||||||||||||||||||| || | || |||||| Sbjct: 46499 gaagcagctgcggcggatctcgccgacgttcccgccgggcctgggtaccttgctgagctt 46558 Query: 298 ggccatggacttggcgaactgcgcgaagaaggcgtccttgttccgcgcgaactgctgcac 357 | ||||||||||||| ||||| ||||||||||| |||||| | ||||||||||| || Sbjct: 46559 gaccatggacttggcaaactggtcgaagaaggcggccttgtcctgcgcgaactgcctgac 46618 Query: 358 gatgggcgccgtggttcggtccttgatgagcaccatgtcggaggtgaagacgccctggc 416 ||||| ||||||||| ||| ||| |||||| |||||||||| |||||||| ||||||| Sbjct: 46619 gatggacgccgtggtctggttcttcatgagcgccatgtcggaagtgaagacaccctggc 46677 Score = 113 bits (57), Expect = 5e-22 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 236 ctgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggcgcggtggc-gag 294 ||||||||| |||||||||||||||||||||||| | | | |||||| | |||| ||| Sbjct: 53903 ctgaagcagctgcggcggatctcgccgacgttcctgtcagtcctcggaacc-tggctgag 53961 Query: 295 cttggccatggacttggcgaactgcgcgaagaaggcgtccttgttccgc-gcgaactgct 353 |||| |||||||||||||||||||| |||||| ||| ||||| ||||| ||||||||| Sbjct: 53962 cttgaccatggacttggcgaactgcctgaagaatgcggccttg-tccgcggcgaactgcc 54020 Query: 354 gcacgatgggcgccgtggttcggtccttgatgagcaccatgtcggaggtgaagacgccct 413 ||||| ||||||||| | ||||||||||||||| |||| ||||||||||| || |||| Sbjct: 54021 tgacgattggcgccgtgatccggtccttgatgagcgccatatcggaggtgaacaccccct 54080 Query: 414 g 414 | Sbjct: 54081 g 54081 Score = 83.8 bits (42), Expect = 4e-13 Identities = 144/178 (80%) Strand = Plus / Plus Query: 237 tgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggcgcggtggcgagct 296 ||||||||||||||||||||||||| ||||||||||||||||||| | || |||| Sbjct: 38372 tgaagcagttgcggcggatctcgcctttgttcccgccgggcctcggcaccttgctcagct 38431 Query: 297 tggccatggacttggcgaactgcgcgaagaaggcgtccttgttccgcgcgaactgctgca 356 || | |||||| | ||||||||| |||||||||| |||||| | |||||||| || | Sbjct: 38432 tgacgatggacgtaacgaactgcgtgaagaaggcggccttgtcctgcgcgaaccgcctga 38491 Query: 357 cgatgggcgccgtggttcggtccttgatgagcaccatgtcggaggtgaagacgccctg 414 |||||| ||| || ||||| ||||||| |||||||||||||||| || ||||| Sbjct: 38492 cgatggccgcagtttgggggtccaggatgagcgccatgtcggaggtgaacaccccctg 38549 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 244 gttgcggcggatctcgccgacgttccc 270 ||||||||||||||||||||||||||| Sbjct: 23498 gttgcggcggatctcgccgacgttccc 23524
>ref|XM_474449.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1059 Score = 149 bits (75), Expect = 9e-33 Identities = 153/179 (85%) Strand = Plus / Minus Query: 238 gaagcagttgcggcggatctcgccgacgttcccgccgggcctcggcgcggtggcgagctt 297 ||||||| |||||||||||||||||||||||||||||||||| || | || |||||| Sbjct: 969 gaagcagctgcggcggatctcgccgacgttcccgccgggcctgggtaccttgctgagctt 910 Query: 298 ggccatggacttggcgaactgcgcgaagaaggcgtccttgttccgcgcgaactgctgcac 357 | ||||||||||||| ||||| ||||||||||| |||||| | ||||||||||| || Sbjct: 909 gaccatggacttggcaaactggtcgaagaaggcggccttgtcctgcgcgaactgcctgac 850 Query: 358 gatgggcgccgtggttcggtccttgatgagcaccatgtcggaggtgaagacgccctggc 416 ||||| ||||||||| ||| ||| |||||| |||||||||| |||||||| ||||||| Sbjct: 849 gatggacgccgtggtctggttcttcatgagcgccatgtcggaagtgaagacaccctggc 791
>dbj|AK067667.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118D03, full insert sequence Length = 1385 Score = 149 bits (75), Expect = 9e-33 Identities = 153/179 (85%) Strand = Plus / Minus Query: 238 gaagcagttgcggcggatctcgccgacgttcccgccgggcctcggcgcggtggcgagctt 297 ||||||| |||||||||||||||||||||||||||||||||| || | || |||||| Sbjct: 1100 gaagcagctgcggcggatctcgccgacgttcccgccgggcctgggtaccttgctgagctt 1041 Query: 298 ggccatggacttggcgaactgcgcgaagaaggcgtccttgttccgcgcgaactgctgcac 357 | ||||||||||||| ||||| ||||||||||| |||||| | ||||||||||| || Sbjct: 1040 gaccatggacttggcaaactggtcgaagaaggcggccttgtcctgcgcgaactgcctgac 981 Query: 358 gatgggcgccgtggttcggtccttgatgagcaccatgtcggaggtgaagacgccctggc 416 ||||| ||||||||| ||| ||| |||||| |||||||||| |||||||| ||||||| Sbjct: 980 gatggacgccgtggtctggttcttcatgagcgccatgtcggaagtgaagacaccctggc 922
>tpe|BN000591.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx62 gene for class III peroxidase 62 precursor, exons 1-2 Length = 1186 Score = 149 bits (75), Expect = 9e-33 Identities = 153/179 (85%) Strand = Plus / Minus Query: 238 gaagcagttgcggcggatctcgccgacgttcccgccgggcctcggcgcggtggcgagctt 297 ||||||| |||||||||||||||||||||||||||||||||| || | || |||||| Sbjct: 1096 gaagcagctgcggcggatctcgccgacgttcccgccgggcctgggtaccttgctgagctt 1037 Query: 298 ggccatggacttggcgaactgcgcgaagaaggcgtccttgttccgcgcgaactgctgcac 357 | ||||||||||||| ||||| ||||||||||| |||||| | ||||||||||| || Sbjct: 1036 gaccatggacttggcaaactggtcgaagaaggcggccttgtcctgcgcgaactgcctgac 977 Query: 358 gatgggcgccgtggttcggtccttgatgagcaccatgtcggaggtgaagacgccctggc 416 ||||| ||||||||| ||| ||| |||||| |||||||||| |||||||| ||||||| Sbjct: 976 gatggacgccgtggtctggttcttcatgagcgccatgtcggaagtgaagacaccctggc 918
>emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0701F11, complete sequence Length = 82895 Score = 129 bits (65), Expect = 8e-27 Identities = 156/181 (86%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 236 ctgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggcgcggtggc-gag 294 ||||||||| |||||||||||||||||||||||| | | | |||||| | |||| ||| Sbjct: 81278 ctgaagcagctgcggcggatctcgccgacgttcctgtcagtcctcggaacc-tggctgag 81336 Query: 295 cttggccatggacttggcgaactgcgcgaagaaggcgtccttgttccgc-gcgaactgct 353 |||| ||||||||||||||||||||| |||||| ||| ||||| ||||| ||||||||| Sbjct: 81337 cttgaccatggacttggcgaactgcgtgaagaatgcggccttg-tccgcggcgaactgcc 81395 Query: 354 gcacgatgggcgccgtggttcggtccttgatgagcaccatgtcggaggtgaagacgccct 413 ||||| ||||||||| | ||||||||||||||| |||||||||||||||| || |||| Sbjct: 81396 tgacgattggcgccgtgatccggtccttgatgagcgccatgtcggaggtgaacaccccct 81455 Query: 414 g 414 | Sbjct: 81456 g 81456 Score = 83.8 bits (42), Expect = 4e-13 Identities = 144/178 (80%) Strand = Plus / Plus Query: 237 tgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggcgcggtggcgagct 296 ||||||||||||||||||||||||| ||||||||||||||||||| | || |||| Sbjct: 74474 tgaagcagttgcggcggatctcgcctttgttcccgccgggcctcggcaccttgctcagct 74533 Query: 297 tggccatggacttggcgaactgcgcgaagaaggcgtccttgttccgcgcgaactgctgca 356 || | |||||| | ||||||||| |||||||||| |||||| | |||||||| || | Sbjct: 74534 tgacgatggacgtaacgaactgcgtgaagaaggcggccttgtcctgcgcgaaccgcctga 74593 Query: 357 cgatgggcgccgtggttcggtccttgatgagcaccatgtcggaggtgaagacgccctg 414 |||||| ||| || ||||| ||||||| |||||||||||||||| || ||||| Sbjct: 74594 cgatggccgcagtttgggggtccaggatgagcgccatgtcggaggtgaacaccccctg 74651 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 244 gttgcggcggatctcgccgacgttccc 270 ||||||||||||||||||||||||||| Sbjct: 71228 gttgcggcggatctcgccgacgttccc 71254
>ref|XM_474450.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1008 Score = 113 bits (57), Expect = 5e-22 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Minus Query: 236 ctgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggcgcggtggc-gag 294 ||||||||| |||||||||||||||||||||||| | | | |||||| | |||| ||| Sbjct: 950 ctgaagcagctgcggcggatctcgccgacgttcctgtcagtcctcggaacc-tggctgag 892 Query: 295 cttggccatggacttggcgaactgcgcgaagaaggcgtccttgttccgcg-cgaactgct 353 |||| |||||||||||||||||||| |||||| ||| |||||| ||||| |||||||| Sbjct: 891 cttgaccatggacttggcgaactgcctgaagaatgcggccttgt-ccgcggcgaactgcc 833 Query: 354 gcacgatgggcgccgtggttcggtccttgatgagcaccatgtcggaggtgaagacgccct 413 ||||| ||||||||| | ||||||||||||||| |||| ||||||||||| || |||| Sbjct: 832 tgacgattggcgccgtgatccggtccttgatgagcgccatatcggaggtgaacaccccct 773 Query: 414 g 414 | Sbjct: 772 g 772
>tpe|BN000592.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx63 gene for class III peroxidase 63 precursor, exons 1-2 Length = 1098 Score = 113 bits (57), Expect = 5e-22 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Minus Query: 236 ctgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggcgcggtggc-gag 294 ||||||||| |||||||||||||||||||||||| | | | |||||| | |||| ||| Sbjct: 1040 ctgaagcagctgcggcggatctcgccgacgttcctgtcagtcctcggaacc-tggctgag 982 Query: 295 cttggccatggacttggcgaactgcgcgaagaaggcgtccttgttccgcg-cgaactgct 353 |||| |||||||||||||||||||| |||||| ||| |||||| ||||| |||||||| Sbjct: 981 cttgaccatggacttggcgaactgcctgaagaatgcggccttgt-ccgcggcgaactgcc 923 Query: 354 gcacgatgggcgccgtggttcggtccttgatgagcaccatgtcggaggtgaagacgccct 413 ||||| ||||||||| | ||||||||||||||| |||| ||||||||||| || |||| Sbjct: 922 tgacgattggcgccgtgatccggtccttgatgagcgccatatcggaggtgaacaccccct 863 Query: 414 g 414 | Sbjct: 862 g 862
>dbj|AK070680.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060N16, full insert sequence Length = 2256 Score = 105 bits (53), Expect = 1e-19 Identities = 153/181 (84%), Gaps = 4/181 (2%) Strand = Plus / Minus Query: 236 ctgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggcgcggtggc-gag 294 ||||||||| |||||||||||||||||||||||| | | | |||||| | |||| ||| Sbjct: 975 ctgaagcagctgcggcggatctcgccgacgttcctgtcagtcctcggaacc-tggctgag 917 Query: 295 cttggccatggacttggcgaactgcgcgaagaaggcgtccttgttccgcg-cgaactgct 353 |||| |||||||||||||||||||| |||||| ||| |||||| ||||| ||| |||| Sbjct: 916 cttgaccatggacttggcgaactgcctgaagaatgcggccttgt-ccgcggcgagctgcc 858 Query: 354 gcacgatgggcgccgtggttcggtccttgatgagcaccatgtcggaggtgaagacgccct 413 ||||| ||||||||| | ||||||||||||||| |||| ||||||||||| || |||| Sbjct: 857 tgacgattggcgccgtgatccggtccttgatgagcgccatatcggaggtgaacaccccct 798 Query: 414 g 414 | Sbjct: 797 g 797
>ref|XM_474448.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1023 Score = 83.8 bits (42), Expect = 4e-13 Identities = 144/178 (80%) Strand = Plus / Minus Query: 237 tgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggcgcggtggcgagct 296 ||||||||||||||||||||||||| ||||||||||||||||||| | || |||| Sbjct: 964 tgaagcagttgcggcggatctcgcctttgttcccgccgggcctcggcaccttgctcagct 905 Query: 297 tggccatggacttggcgaactgcgcgaagaaggcgtccttgttccgcgcgaactgctgca 356 || | |||||| | ||||||||| |||||||||| |||||| | |||||||| || | Sbjct: 904 tgacgatggacgtaacgaactgcgtgaagaaggcggccttgtcctgcgcgaaccgcctga 845 Query: 357 cgatgggcgccgtggttcggtccttgatgagcaccatgtcggaggtgaagacgccctg 414 |||||| ||| || ||||| ||||||| |||||||||||||||| || ||||| Sbjct: 844 cgatggccgcagtttgggggtccaggatgagcgccatgtcggaggtgaacaccccctg 787
>dbj|AK104928.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-B06, full insert sequence Length = 1299 Score = 83.8 bits (42), Expect = 4e-13 Identities = 144/178 (80%) Strand = Plus / Minus Query: 237 tgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggcgcggtggcgagct 296 ||||||||||||||||||||||||| ||||||||||||||||||| | || |||| Sbjct: 1053 tgaagcagttgcggcggatctcgcctttgttcccgccgggcctcggcaccttgctcagct 994 Query: 297 tggccatggacttggcgaactgcgcgaagaaggcgtccttgttccgcgcgaactgctgca 356 || | |||||| | ||||||||| |||||||||| |||||| | |||||||| || | Sbjct: 993 tgacgatggacgtaacgaactgcgtgaagaaggcggccttgtcctgcgcgaaccgcctga 934 Query: 357 cgatgggcgccgtggttcggtccttgatgagcaccatgtcggaggtgaagacgccctg 414 |||||| ||| || ||||| ||||||| |||||||||||||||| || ||||| Sbjct: 933 cgatggccgcagtttgggggtccaggatgagcgccatgtcggaggtgaacaccccctg 876
>dbj|AK065090.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001L22, full insert sequence Length = 1333 Score = 83.8 bits (42), Expect = 4e-13 Identities = 144/178 (80%) Strand = Plus / Minus Query: 237 tgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggcgcggtggcgagct 296 ||||||||||||||||||||||||| ||||||||||||||||||| | || |||| Sbjct: 1054 tgaagcagttgcggcggatctcgcctttgttcccgccgggcctcggcaccttgctcagct 995 Query: 297 tggccatggacttggcgaactgcgcgaagaaggcgtccttgttccgcgcgaactgctgca 356 || | |||||| | ||||||||| |||||||||| |||||| | |||||||| || | Sbjct: 994 tgacgatggacgtaacgaactgcgtgaagaaggcggccttgtcctgcgcgaaccgcctga 935 Query: 357 cgatgggcgccgtggttcggtccttgatgagcaccatgtcggaggtgaagacgccctg 414 |||||| ||| || ||||| ||||||| |||||||||||||||| || ||||| Sbjct: 934 cgatggccgcagtttgggggtccaggatgagcgccatgtcggaggtgaacaccccctg 877
>tpe|BN000590.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx61 gene for class III peroxidase 61, exons 1-2 Length = 1178 Score = 83.8 bits (42), Expect = 4e-13 Identities = 144/178 (80%) Strand = Plus / Minus Query: 237 tgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggcgcggtggcgagct 296 ||||||||||||||||||||||||| ||||||||||||||||||| | || |||| Sbjct: 1119 tgaagcagttgcggcggatctcgcctttgttcccgccgggcctcggcaccttgctcagct 1060 Query: 297 tggccatggacttggcgaactgcgcgaagaaggcgtccttgttccgcgcgaactgctgca 356 || | |||||| | ||||||||| |||||||||| |||||| | |||||||| || | Sbjct: 1059 tgacgatggacgtaacgaactgcgtgaagaaggcggccttgtcctgcgcgaaccgcctga 1000 Query: 357 cgatgggcgccgtggttcggtccttgatgagcaccatgtcggaggtgaagacgccctg 414 |||||| ||| || ||||| ||||||| |||||||||||||||| || ||||| Sbjct: 999 cgatggccgcagtttgggggtccaggatgagcgccatgtcggaggtgaacaccccctg 942
>ref|XM_482738.1| Oryza sativa (japonica cultivar-group), mRNA Length = 546 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 254 atctcgccgacgttcccgccgggcctcggcgcggtggcgagcttggccatggacttggcg 313 |||||||||||||||||||||||||||||| | || |||||| | ||||||||| || Sbjct: 231 atctcgccgacgttcccgccgggcctcggcaccttgctcagcttgacgatggacttgacg 172 Query: 314 aactgcgcgaagaaggcgtccttgt 338 || |||| |||||| ||| |||||| Sbjct: 171 aattgcgtgaagaaagcggccttgt 147
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 254 atctcgccgacgttcccgccgggcctcggcgcggtggcgagcttggccatggacttggcg 313 |||||||||||||||||||||||||||||| | || |||||| | ||||||||| || Sbjct: 22269513 atctcgccgacgttcccgccgggcctcggcaccttgctcagcttgacgatggacttgacg 22269454 Query: 314 aactgcgcgaagaaggcgtccttgt 338 || |||| |||||| ||| |||||| Sbjct: 22269453 aattgcgtgaagaaagcggccttgt 22269429
>dbj|AP004662.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0048G02 Length = 155542 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 254 atctcgccgacgttcccgccgggcctcggcgcggtggcgagcttggccatggacttggcg 313 |||||||||||||||||||||||||||||| | || |||||| | ||||||||| || Sbjct: 85889 atctcgccgacgttcccgccgggcctcggcaccttgctcagcttgacgatggacttgacg 85830 Query: 314 aactgcgcgaagaaggcgtccttgt 338 || |||| |||||| ||| |||||| Sbjct: 85829 aattgcgtgaagaaagcggccttgt 85805
>emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0088C09, complete sequence Length = 96079 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 295 cttggccatggacttggcgaactgcgcgaagaag 328 |||| ||||||||||||||||||||||||||||| Sbjct: 67556 cttgaccatggacttggcgaactgcgcgaagaag 67523
>dbj|AK108989.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-F11, full insert sequence Length = 1351 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 295 cttggccatggacttggcgaactgcgcgaagaag 328 |||| ||||||||||||||||||||||||||||| Sbjct: 1045 cttgaccatggacttggcgaactgcgcgaagaag 1012
>tpe|BN000583.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx54 gene for class III peroxidase 54 precursor, exon 1 Length = 1038 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 295 cttggccatggacttggcgaactgcgcgaagaag 328 |||| ||||||||||||||||||||||||||||| Sbjct: 963 cttgaccatggacttggcgaactgcgcgaagaag 930
>emb|AL731590.4|OSJN00233 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035I04, complete sequence Length = 140890 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 295 cttggccatggacttggcgaactgcgcgaagaag 328 |||| ||||||||||||||||||||||||||||| Sbjct: 9730 cttgaccatggacttggcgaactgcgcgaagaag 9697
>ref|XM_474445.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1047 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 244 gttgcggcggatctcgccgacgttccc 270 ||||||||||||||||||||||||||| Sbjct: 975 gttgcggcggatctcgccgacgttccc 949
>dbj|AK103558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132H20, full insert sequence Length = 1413 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 244 gttgcggcggatctcgccgacgttccc 270 ||||||||||||||||||||||||||| Sbjct: 1078 gttgcggcggatctcgccgacgttccc 1052
>dbj|AK101245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032B08, full insert sequence Length = 3800 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 244 gttgcggcggatctcgccgacgttccc 270 ||||||||||||||||||||||||||| Sbjct: 3566 gttgcggcggatctcgccgacgttccc 3540
>tpe|BN000589.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx60 gene for class III peroxidase 60 precursor, exons 1-3 Length = 1221 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 244 gttgcggcggatctcgccgacgttccc 270 ||||||||||||||||||||||||||| Sbjct: 1149 gttgcggcggatctcgccgacgttccc 1123
>gb|DQ376124.1| Eucalyptus globulus subsp. globulus peroxidase (Px1) mRNA, partial cds Length = 957 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 295 cttggccatggacttggcgaactgcgcgaagaag 328 |||| |||||||||||||||||||| |||||||| Sbjct: 723 cttgaccatggacttggcgaactgctcgaagaag 690
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 254 atctcgccgacgttcccgccgggcctcggc 283 |||||||||||||||| ||||||||||||| Sbjct: 8721819 atctcgccgacgttcctgccgggcctcggc 8721848
>dbj|AP005802.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0057D11 Length = 190790 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 254 atctcgccgacgttcccgccgggcctcggc 283 |||||||||||||||| ||||||||||||| Sbjct: 151615 atctcgccgacgttcctgccgggcctcggc 151644
>gb|AY857764.1| Triticum monococcum peroxidase 10 (POX10) mRNA, partial cds Length = 1308 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Minus Query: 300 ccatggacttggcgaactgcgcgaagaaggcg 331 |||||||||||||||||||| |||||||||| Sbjct: 925 ccatggacttggcgaactgccggaagaaggcg 894
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29 Length = 283100 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 220 gcgcagggcgttggggctgaagc 242 ||||||||||||||||||||||| Sbjct: 20456 gcgcagggcgttggggctgaagc 20478
>ref|XM_754706.1| Ustilago maydis 521 hypothetical protein (UM03652.1) partial mRNA Length = 1404 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 199 ctcgacgacggtgtcgatggcg 220 |||||||||||||||||||||| Sbjct: 174 ctcgacgacggtgtcgatggcg 195
>gb|AE012280.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 188 of 460 of the complete genome Length = 10801 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 207 cggtgtcgatggcgcgcagggc 228 |||||||||||||||||||||| Sbjct: 9466 cggtgtcgatggcgcgcagggc 9487
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 207 cggtgtcgatggcgcgcagggc 228 |||||||||||||||||||||| Sbjct: 2961888 cggtgtcgatggcgcgcagggc 2961867
>emb|Y13905.1|ZMY13905 Zea mays mRNA for anionic peroxidase Length = 1248 Score = 42.1 bits (21), Expect = 1.5 Identities = 42/49 (85%) Strand = Plus / Minus Query: 300 ccatggacttggcgaactgcgcgaagaaggcgtccttgttccgcgcgaa 348 |||||||| |||||||||| ||||||||||| ||| ||| ||||||| Sbjct: 993 ccatggacctggcgaactggtcgaagaaggcggcctggttgagcgcgaa 945
>emb|AL606611.3|OSJN00044 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0043H09, complete sequence Length = 88824 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 188 tcctcgccggcctcgacgacg 208 ||||||||||||||||||||| Sbjct: 15318 tcctcgccggcctcgacgacg 15338
>emb|AJ878510.1| Triticum aestivum mRNA for peroxidase precursor (prx gene), cultivar Cheyenne Length = 1226 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 295 cttggccatggacttggcgaactgcgcgaagaaggcg 331 ||||| ||||||| |||||||||| ||||||||||| Sbjct: 976 cttggtcatggaccgggcgaactgctcgaagaaggcg 940
>gb|AE005086.1| Halobacterium sp. NRC-1 section 117 of 170 of the complete genome Length = 11548 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 199 ctcgacgacggtgtcgatggcgcgc 223 ||||||| ||||||||||||||||| Sbjct: 1337 ctcgacggcggtgtcgatggcgcgc 1361
>emb|AJ438168.1|HSA438168 Halobacterium salinarum basB gene for amino acid binding protein Length = 1242 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 199 ctcgacgacggtgtcgatggcgcgc 223 ||||||| ||||||||||||||||| Sbjct: 192 ctcgacggcggtgtcgatggcgcgc 168
>gb|AY110269.1| Zea mays CL1874_1 mRNA sequence Length = 1321 Score = 42.1 bits (21), Expect = 1.5 Identities = 42/49 (85%) Strand = Plus / Minus Query: 300 ccatggacttggcgaactgcgcgaagaaggcgtccttgttccgcgcgaa 348 |||||||| |||||||||| ||||||||||| ||| ||| ||||||| Sbjct: 993 ccatggacctggcgaactggtcgaagaaggcggcctggttgagcgcgaa 945
>ref|XM_549978.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1047 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cttcctcctcgccggcctcg 202 |||||||||||||||||||| Sbjct: 65 cttcctcctcgccggcctcg 84
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 acacgcacacacgcgagcag 104 |||||||||||||||||||| Sbjct: 469966 acacgcacacacgcgagcag 469947
>gb|AY857763.1| Triticum monococcum peroxidase 9 (POX9) mRNA, partial cds Length = 760 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 300 ccatggacttggcgaactgcgcgaagaa 327 ||||||| |||||||||||| ||||||| Sbjct: 489 ccatggatttggcgaactgctcgaagaa 462
>ref|XM_417519.1| PREDICTED: Gallus gallus similar to Beta-1,4-galactosyltransferase 5 (Beta-1,4-GalTase 5) (Beta4Gal-T5) (b4Gal-T5) (UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 5) (UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 5) (Beta-1,4-GalT II)... (LOC419358), mRNA Length = 2053 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ttcccgccgggcctcggcgc 285 |||||||||||||||||||| Sbjct: 37 ttcccgccgggcctcggcgc 56
>gb|AY657608.1| Synthetic construct Peudomonas aeruginosa clone FLH041311.01F PA1219 gene, partial cds Length = 615 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 cttggcgaactgcgcgaaga 326 |||||||||||||||||||| Sbjct: 358 cttggcgaactgcgcgaaga 377
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 cctggctgttcaccagcgcc 430 |||||||||||||||||||| Sbjct: 3599629 cctggctgttcaccagcgcc 3599648
>gb|AC149631.3| Rhinolophus ferrumequinum clone VMRC7-80B12, complete sequence Length = 142320 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 399 aggtgaagacgccctggctg 418 |||||||||||||||||||| Sbjct: 89134 aggtgaagacgccctggctg 89115
>gb|AF440781.1| Streptomyces cinnamonensis polyether antibiotic monensin biosynthesis gene cluster, partial sequence Length = 103450 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 gccgggcctcggcgcggtgg 290 |||||||||||||||||||| Sbjct: 22292 gccgggcctcggcgcggtgg 22273
>emb|AJ277469.1|OSA277469 Oryza sativa rbbi3-3 gene for rice Bowman Birk trypsin inhibitor Length = 4624 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cttcctcctcgccggcctcg 202 |||||||||||||||||||| Sbjct: 2721 cttcctcctcgccggcctcg 2740
>emb|AJ277468.1|OSA277468 Oryza sativa rbbi3-1 gene for putative Bowman Birk trypsin inhibitor Length = 17385 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cttcctcctcgccggcctcg 202 |||||||||||||||||||| Sbjct: 3570 cttcctcctcgccggcctcg 3589
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 ggctgttcaccagcgccttg 433 |||||||||||||||||||| Sbjct: 2464047 ggctgttcaccagcgccttg 2464066
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cttcctcctcgccggcctcg 202 |||||||||||||||||||| Sbjct: 1353708 cttcctcctcgccggcctcg 1353689 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cttcctcctcgccggcctcg 202 |||||||||||||||||||| Sbjct: 1347659 cttcctcctcgccggcctcg 1347640
>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold Length = 1756392 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 399 aggtgaagacgccctggctg 418 |||||||||||||||||||| Sbjct: 1576481 aggtgaagacgccctggctg 1576462
>gb|AE004624.1| Pseudomonas aeruginosa PAO1, section 185 of 529 of the complete genome Length = 11533 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 ggctgttcaccagcgccttg 433 |||||||||||||||||||| Sbjct: 4156 ggctgttcaccagcgccttg 4175
>gb|AE004551.1| Pseudomonas aeruginosa PAO1, section 112 of 529 of the complete genome Length = 16527 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 cttggcgaactgcgcgaaga 326 |||||||||||||||||||| Sbjct: 12690 cttggcgaactgcgcgaaga 12671
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 ctcgccggcctcgacgacgg 209 |||||||||||||||||||| Sbjct: 4380189 ctcgccggcctcgacgacgg 4380170
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 cgggcctcggcgcggtggcgagct 296 ||||||||||||||| |||||||| Sbjct: 1082965 cgggcctcggcgcggcggcgagct 1082942
>dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0037C04 Length = 137879 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cttcctcctcgccggcctcg 202 |||||||||||||||||||| Sbjct: 51759 cttcctcctcgccggcctcg 51740 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cttcctcctcgccggcctcg 202 |||||||||||||||||||| Sbjct: 45710 cttcctcctcgccggcctcg 45691
>dbj|AK104367.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D09, full insert sequence Length = 1059 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cttcctcctcgccggcctcg 202 |||||||||||||||||||| Sbjct: 65 cttcctcctcgccggcctcg 84
>dbj|AK104110.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-G03, full insert sequence Length = 1047 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cttcctcctcgccggcctcg 202 |||||||||||||||||||| Sbjct: 65 cttcctcctcgccggcctcg 84
>dbj|AK067257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096H09, full insert sequence Length = 1072 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cttcctcctcgccggcctcg 202 |||||||||||||||||||| Sbjct: 63 cttcctcctcgccggcctcg 82
>dbj|AB098712.1| Oryza sativa (japonica cultivar-group) ti mRNA for trypsin inhibitor, complete cds Length = 1061 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cttcctcctcgccggcctcg 202 |||||||||||||||||||| Sbjct: 44 cttcctcctcgccggcctcg 63
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 gcggcggatctcgccgacgt 266 |||||||||||||||||||| Sbjct: 2397794 gcggcggatctcgccgacgt 2397813
>gb|U87832.1|OBU87832 Oat blue dwarf virus complete genome Length = 6509 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 ccttcctcctcgccggcctc 201 |||||||||||||||||||| Sbjct: 1277 ccttcctcctcgccggcctc 1296
>gb|U76004.1|OSU76004 Oryza sativa Bowman-Birk proteinase inhibitor mRNA, complete cds Length = 1050 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cttcctcctcgccggcctcg 202 |||||||||||||||||||| Sbjct: 21 cttcctcctcgccggcctcg 40
>gb|AF319782.2| Callitrichine herpesvirus 3 strain CJ0149, complete genome Length = 149696 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 172 agccgtgaatccttcctcctcgccggcc 199 |||| ||||||||||||||||| ||||| Sbjct: 83746 agccttgaatccttcctcctcgacggcc 83773
>dbj|AP002909.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0044F08 Length = 141528 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cttcctcctcgccggcctcg 202 |||||||||||||||||||| Sbjct: 3329 cttcctcctcgccggcctcg 3310 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,448,421 Number of Sequences: 3902068 Number of extensions: 3448421 Number of successful extensions: 69769 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 71 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 68595 Number of HSP's gapped (non-prelim): 1173 length of query: 442 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 420 effective length of database: 17,147,199,772 effective search space: 7201823904240 effective search space used: 7201823904240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
