>gb|AC102590.9| Mus musculus chromosome 12, clone RP23-335D14, complete sequence
          Length = 202328

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 81    gtatatatattagcaaactagt 102
             ||||||||||||||||||||||
Sbjct: 28223 gtatatatattagcaaactagt 28244

>gb|AC154472.2| Mus musculus BAC clone RP24-120L6 from chromosome 12, complete sequence
          Length = 155996

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 81     gtatatatattagcaaactagt 102
              ||||||||||||||||||||||
Sbjct: 155257 gtatatatattagcaaactagt 155278

>gb|AY483250.1| Aethionema saxatile NADH dehydrogenase subunit F (ndhF) gene,
           partial cds; chloroplast
          Length = 845

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 24  tcctatgcttgtattactttt 44
           |||||||||||||||||||||
Sbjct: 561 tcctatgcttgtattactttt 581

>gb|DQ288798.1| Moriera spinosa NADH dehydrogenase subunit F (ndhF) gene, partial
            cds; chloroplast
          Length = 2064

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 24   tcctatgcttgtattactttt 44
            |||||||||||||||||||||
Sbjct: 1595 tcctatgcttgtattactttt 1615

>gb|DQ288765.1| Draba altaica NADH dehydrogenase subunit F (ndhF) gene, partial cds;
            chloroplast
          Length = 2070

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 24   tcctatgcttgtattactttt 44
            |||||||||||||||||||||
Sbjct: 1595 tcctatgcttgtattactttt 1615

>gb|DQ288758.1| Cusickiella quadricostata NADH dehydrogenase subunit F (ndhF) gene,
            partial cds; chloroplast
          Length = 2070

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 24   tcctatgcttgtattactttt 44
            |||||||||||||||||||||
Sbjct: 1595 tcctatgcttgtattactttt 1615

>gb|DQ288757.1| Cremolobus subscandens NADH dehydrogenase subunit F (ndhF) gene,
            partial cds; chloroplast
          Length = 2070

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 24   tcctatgcttgtattactttt 44
            |||||||||||||||||||||
Sbjct: 1595 tcctatgcttgtattactttt 1615

>gb|DQ288752.1| Chalcanthus renifolius NADH dehydrogenase subunit F (ndhF)
            pseudogene, partial sequence; chloroplast
          Length = 2070

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 24   tcctatgcttgtattactttt 44
            |||||||||||||||||||||
Sbjct: 1595 tcctatgcttgtattactttt 1615

>gb|DQ288750.1| Caulanthus crassicaulis NADH dehydrogenase subunit F (ndhF) gene,
            partial cds; chloroplast
          Length = 2070

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 24   tcctatgcttgtattactttt 44
            |||||||||||||||||||||
Sbjct: 1595 tcctatgcttgtattactttt 1615

>gb|DQ288736.1| Baimashania pulvinata NADH dehydrogenase subunit F (ndhF) gene,
            partial cds; chloroplast
          Length = 2069

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 24   tcctatgcttgtattactttt 44
            |||||||||||||||||||||
Sbjct: 1595 tcctatgcttgtattactttt 1615

>gb|DQ288731.1| Arabis alpina NADH dehydrogenase subunit F (ndhF) gene, partial cds;
            chloroplast
          Length = 2079

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 24   tcctatgcttgtattactttt 44
            |||||||||||||||||||||
Sbjct: 1604 tcctatgcttgtattactttt 1624

>gb|DQ288726.1| Aethionema saxatile NADH dehydrogenase subunit F (ndhF) gene, partial
            cds; chloroplast
          Length = 2064

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 24   tcctatgcttgtattactttt 44
            |||||||||||||||||||||
Sbjct: 1595 tcctatgcttgtattactttt 1615

>gb|AC105384.3| Homo sapiens BAC clone RP11-89B16 from 4, complete sequence
          Length = 155324

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 149 tggacagcttggttatttcca 169
           |||||||||||||||||||||
Sbjct: 622 tggacagcttggttatttcca 642

>gb|AC009316.3| Homo sapiens BAC clone RP11-562F14 from 2, complete sequence
          Length = 146204

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 71    ggttacataggtatatatatt 91
             |||||||||||||||||||||
Sbjct: 78252 ggttacataggtatatatatt 78232

>gb|AF064657.2|AF064657 Aethionema grandiflora NADH dehydrogenase subunit F (ndhF) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 770

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 24  tcctatgcttgtattactttt 44
           |||||||||||||||||||||
Sbjct: 304 tcctatgcttgtattactttt 324

>gb|AC124017.2| Homo sapiens BAC clone RP11-317M11 from 4, complete sequence
          Length = 138271

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 149    tggacagcttggttatttcca 169
              |||||||||||||||||||||
Sbjct: 136893 tggacagcttggttatttcca 136913

>gb|AF401203.1| Homo sapiens chAB4 multisequence family and NF1-related multisequence
             family regions
          Length = 86723

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    gttacataggtatatatatt 91
             ||||||||||||||||||||
Sbjct: 35692 gttacataggtatatatatt 35673

>ref|XM_362509.1| Magnaporthe grisea 70-15 hypothetical protein (MG08092.4) partial
            mRNA
          Length = 4116

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 230  gcaagctccaatgcagctgc 249
            ||||||||||||||||||||
Sbjct: 3410 gcaagctccaatgcagctgc 3391

>gb|AC147379.3| Pan troglodytes BAC clone RP43-175C18 from 7, complete sequence
          Length = 219482

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    tgatctgttccaatacacag 69
             ||||||||||||||||||||
Sbjct: 86118 tgatctgttccaatacacag 86099

>gb|AC134878.3| Homo sapiens BAC clone RP11-131M6 from Y, complete sequence
          Length = 155813

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    gttacataggtatatatatt 91
             ||||||||||||||||||||
Sbjct: 55296 gttacataggtatatatatt 55277

>gb|AC145990.3| Pan troglodytes BAC clone RP43-168N19 from 7, complete sequence
          Length = 144496

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 50     tgatctgttccaatacacag 69
              ||||||||||||||||||||
Sbjct: 122904 tgatctgttccaatacacag 122885

>gb|AC138772.4| Homo sapiens BAC clone RP11-1345A16 from UL, complete sequence
          Length = 213227

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    gttacataggtatatatatt 91
             ||||||||||||||||||||
Sbjct: 50905 gttacataggtatatatatt 50886

>gb|AC145212.1| Homo sapiens BAC clone RP11-1368F8 from UL, complete sequence
          Length = 191469

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 72     gttacataggtatatatatt 91
              ||||||||||||||||||||
Sbjct: 123461 gttacataggtatatatatt 123480

>gb|AC138771.4| Homo sapiens BAC clone RP11-1338E21 from UL, complete sequence
          Length = 157733

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 72     gttacataggtatatatatt 91
              ||||||||||||||||||||
Sbjct: 110087 gttacataggtatatatatt 110106

>emb|AL109846.1|SPBC17G9 S.pombe chromosome II cosmid c17G9
          Length = 32618

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 72    gttacataggtatatatattagca 95
             ||||||||||||||||||| ||||
Sbjct: 14848 gttacataggtatatatataagca 14825

>emb|CR392039.8| Human DNA sequence from clone bP-2171C21 on chromosome 21, complete
            sequence
          Length = 158069

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 72   gttacataggtatatatatt 91
            ||||||||||||||||||||
Sbjct: 6546 gttacataggtatatatatt 6527

>emb|CR381535.11| Human DNA sequence from clone bP-2154M18 on chromosome 21, complete
             sequence
          Length = 152296

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    gttacataggtatatatatt 91
             ||||||||||||||||||||
Sbjct: 94337 gttacataggtatatatatt 94356

>gb|AC138775.3| Homo sapiens BAC clone RP11-1247B7 from chromosome 2, complete sequence
          Length = 210658

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    gttacataggtatatatatt 91
             ||||||||||||||||||||
Sbjct: 59799 gttacataggtatatatatt 59780

>gb|AC148028.2| Homo sapiens chromosome UNKNOWN clone RP11-238G20, complete sequence
          Length = 172857

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 72     gttacataggtatatatatt 91
              ||||||||||||||||||||
Sbjct: 117459 gttacataggtatatatatt 117478

>emb|BX649273.3| Mouse DNA sequence from clone RP23-51F20 on chromosome 4, complete
             sequence
          Length = 31098

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    ggtatatatattagcaaact 99
             ||||||||||||||||||||
Sbjct: 25532 ggtatatatattagcaaact 25551

>emb|AL354822.8| Human DNA sequence from clone RP11-474C22 on chromosome 22, complete
              sequence
          Length = 161147

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 72     gttacataggtatatatatt 91
              ||||||||||||||||||||
Sbjct: 105744 gttacataggtatatatatt 105763

>emb|AL583842.40| Human DNA sequence from clone RP11-417J8 on chromosome 1, complete
             sequence
          Length = 195588

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    gttacataggtatatatatt 91
             ||||||||||||||||||||
Sbjct: 74939 gttacataggtatatatatt 74920

>gb|AY106065.1| Zea mays PCO096468 mRNA sequence
          Length = 1347

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 393 tgcaaactgcgagctccggt 412
           ||||||||||||||||||||
Sbjct: 859 tgcaaactgcgagctccggt 878

>gb|AF060568.1|AF060568 Homo sapiens promyelocytic leukemia zinc finger protein (PLZF) gene,
             complete cds
          Length = 201239

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    acttttggtcttgatctgtt 58
             ||||||||||||||||||||
Sbjct: 24027 acttttggtcttgatctgtt 24008

>dbj|AP000908.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-711K22, complete
              sequence
          Length = 149132

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 39     acttttggtcttgatctgtt 58
              ||||||||||||||||||||
Sbjct: 126052 acttttggtcttgatctgtt 126033

>emb|AL355793.6| Human DNA sequence from clone RP4-694M10 on chromosome 1, complete
             sequence
          Length = 101333

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    gttacataggtatatatatt 91
             ||||||||||||||||||||
Sbjct: 46843 gttacataggtatatatatt 46862

>emb|BX004987.9| Human DNA sequence from clone RP11-435B5 on chromosome 1, complete
              sequence
          Length = 201709

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 72     gttacataggtatatatatt 91
              ||||||||||||||||||||
Sbjct: 133220 gttacataggtatatatatt 133239

>emb|AL355973.21| Human DNA sequence from clone RP4-660N4 on chromosome 1, complete
             sequence
          Length = 110898

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    gttacataggtatatatatt 91
             ||||||||||||||||||||
Sbjct: 49815 gttacataggtatatatatt 49796


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,900,294
Number of Sequences: 3902068
Number of extensions: 2900294
Number of successful extensions: 60689
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60630
Number of HSP's gapped (non-prelim): 59
length of query: 500
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 478
effective length of database: 17,147,199,772
effective search space: 8196361491016
effective search space used: 8196361491016
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)