ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart55g11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_185558.2| Oryza sativa (japonica cultivar-group), mRNA 151 2e-33
2ref|XM_507415.1| PREDICTED Oryza sativa (japonica cultivar-group... 151 2e-33
3ref|XM_506590.2| PREDICTED Oryza sativa (japonica cultivar-group... 151 2e-33
4dbj|AK105861.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 2e-33
5dbj|AK099264.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 2e-33
6dbj|AK070759.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 2e-33
7dbj|AK058311.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 2e-33
8dbj|D17789.1|RICHTBP2 Oryza sativa (japonica cultivar-group) mRN... 151 2e-33
9dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 143 6e-31
10dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic D... 143 6e-31
11dbj|AK069811.1| Oryza sativa (japonica cultivar-group) cDNA clon... 133 6e-28
12dbj|AK058779.1| Oryza sativa (japonica cultivar-group) cDNA clon... 133 6e-28
13dbj|AB037154.1| Oryza sativa (japonica cultivar-group) OsRPT2b m... 133 6e-28
14gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 115 1e-22
15gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome... 115 1e-22
16dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
17gb|AY108940.1| Zea mays PCO101909 mRNA sequence 100 8e-18
18gb|AY105318.1| Zea mays PCO073117 mRNA sequence 86 1e-13
19ref|NM_127572.2| Arabidopsis thaliana ATP binding / ATPase/ hydr... 80 7e-12
20gb|AY056335.1| Arabidopsis thaliana putative 26S proteasome subu... 80 7e-12
21gb|AY035072.1| Arabidopsis thaliana putative 26S proteasome subu... 80 7e-12
22gb|AC006081.4| Arabidopsis thaliana chromosome 2 clone T2G17 map... 80 7e-12
23gb|AF372977.1|AF372977 Arabidopsis thaliana At2g20140/T2G17.6 mR... 80 7e-12
24gb|AY087584.1| Arabidopsis thaliana clone 36815 mRNA, complete s... 80 7e-12
25gb|AY105631.1| Zea mays PCO101908 mRNA sequence 80 7e-12
26dbj|AK058808.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 3e-11
27ref|NM_119048.2| Arabidopsis thaliana RPT2A; ATPase AT4G29040 (R... 74 5e-10
28gb|AY034975.1| Arabidopsis thaliana putative 26S proteasome subu... 74 5e-10
29dbj|AB161192.1| Arabidopsis thaliana HLR mRNA for 26S proteasome... 74 5e-10
30gb|AF123391.1|AF123391 Arabidopsis thaliana 26S proteasome AAA-A... 74 5e-10
31emb|AJ291500.1|BNA291500 Brassica napus homologue of SPH gene, A... 70 7e-09
32emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, ... 66 1e-07
33emb|AL078469.2|ATF25O24 Arabidopsis thaliana DNA chromosome 4, B... 66 1e-07
34emb|AL078470.1|ATF19B15 Arabidopsis thaliana DNA chromosome 4, B... 66 1e-07
35gb|DQ222507.1| Solanum tuberosum clone 115D06 26S proteasome sub... 64 4e-07
36emb|AJ293726.1|BNA293726 Brassica napus homologue of AT4g29030 g... 64 4e-07
37emb|BX819727.1|CNS0A8HI Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
38gb|AF432345.1| Tortula ruralis 26S proteasome regulatory subunit... 52 0.002
39gb|BC071538.1| Danio rerio proteasome (prosome, macropain) 26S s... 48 0.026
40ref|NM_001002091.1| Danio rerio proteasome (prosome, macropain) ... 48 0.026
41emb|AL935145.12| Zebrafish DNA sequence from clone CH211-173B9 i... 48 0.026
42gb|AY639765.1| Hordeum vulgare subsp. spontaneum cultivar PI 560... 42 1.6
43gb|AY639735.1| Hordeum vulgare subsp. spontaneum cultivar PI 466... 42 1.6
44dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
45dbj|AP003635.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
46dbj|AP004008.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
47dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
48ref|XM_312720.2| Anopheles gambiae str. PEST ENSANGP00000017106 ... 42 1.6
49dbj|AK072047.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
50dbj|AK064913.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
51dbj|AK060805.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
52gb|AC120871.12| Mus musculus chromosome 16, clone RP23-121E8, co... 40 6.3
53gb|AC137128.17| Mus musculus chromosome 3, clone RP24-271G16, co... 40 6.3
54gb|AC000121.1| Homo sapiens BAC clone CTA-249A12 from 7, complet... 40 6.3
55gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genom... 40 6.3
56ref|XM_948324.1| Theileria annulata strain Ankara hypothetical p... 40 6.3
57gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 6.3
58gb|AC009634.9| Homo sapiens chromosome 8, clone RP11-413C18, com... 40 6.3
59ref|NM_079745.2| Drosophila melanogaster Proteasome 26S subunit ... 40 6.3
60gb|AC087533.7| Homo sapiens, clone RP11-89A4, complete sequence 40 6.3
61dbj|AK149418.1| Mus musculus adult male liver tumor cDNA, RIKEN ... 40 6.3
62emb|AL935302.7| Zebrafish DNA sequence from clone DKEY-13N1 in l... 40 6.3
63gb|AY058759.1| Drosophila melanogaster SD02658 full length cDNA 40 6.3
64gb|AC000353.27| Homo sapiens Chromosome 11q13 BAC Clone 18h3, co... 40 6.3
65dbj|AK054399.1| Mus musculus 2 days pregnant adult female ovary ... 40 6.3
66gb|AC007929.8|AC007929 Drosophila melanogaster, chromosome 3R, r... 40 6.3
67gb|AC154285.2| Mus musculus BAC clone RP23-452P8 from chromosome... 40 6.3
68gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genom... 40 6.3
69emb|AL672034.5| Mouse DNA sequence from clone RP23-461P10 on chr... 40 6.3
70emb|BX248395.9| Zebrafish DNA sequence from clone CH211-213A13 i... 40 6.3
71gb|AC154408.2| Mus musculus BAC clone RP24-259A5 from 16, comple... 40 6.3
72gb|AC127225.5| Mus musculus BAC clone RP24-499N1 from 3, complet... 40 6.3
73emb|BX005052.6| Zebrafish DNA sequence from clone CH211-42O7 in ... 40 6.3
74gb|AE003745.4| Drosophila melanogaster chromosome 3R, section 83... 40 6.3
75dbj|AP000944.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 6.3
76gb|BC048953.1| Mus musculus zinc finger and BTB domain containin... 40 6.3
77emb|CT027660.1| Medicago truncatula chromosome 5 clone mth4-7a11... 40 6.3
78emb|AL954380.9| Mouse DNA sequence from clone RP23-156O9 on chro... 40 6.3
79gb|U39303.1|DMU39303 Drosophila melanogaster 26S proteasome subu... 40 6.3
80emb|AL845319.10| Mouse DNA sequence from clone RP23-429I7 on chr... 40 6.3
81gb|AC161604.6| Mus musculus BAC clone RP23-245O13 from chromosom... 40 6.3
82dbj|AP001017.5| Homo sapiens genomic DNA, chromosome 18p clone:R... 40 6.3 
>ref|NM_185558.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1597

 Score =  151 bits (76), Expect = 2e-33
 Identities = 88/92 (95%)
 Strand = Plus / Minus

                                                                        
Query: 369  catcacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctccttt 428
            |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1441 catcacatgtaaagaccctccggcacaccttccttcttcttgaacatcaccttctccttt 1382

                                            
Query: 429  gccttcttgaagtcggcgtgtgtcaccttcat 460
            |||||||||||||| || ||||||||||||||
Sbjct: 1381 gccttcttgaagtcagcatgtgtcaccttcat 1350
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>ref|XM_507415.1| PREDICTED Oryza sativa (japonica cultivar-group), P0034A04.112 mRNA
          Length = 1599

 Score =  151 bits (76), Expect = 2e-33
 Identities = 88/92 (95%)
 Strand = Plus / Minus

                                                                        
Query: 369  catcacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctccttt 428
            |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1440 catcacatgtaaagaccctccggcacaccttccttcttcttgaacatcaccttctccttt 1381

                                            
Query: 429  gccttcttgaagtcggcgtgtgtcaccttcat 460
            |||||||||||||| || ||||||||||||||
Sbjct: 1380 gccttcttgaagtcagcatgtgtcaccttcat 1349
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>ref|XM_506590.2| PREDICTED Oryza sativa (japonica cultivar-group), P0034A04.112 mRNA
          Length = 1615

 Score =  151 bits (76), Expect = 2e-33
 Identities = 88/92 (95%)
 Strand = Plus / Minus

                                                                        
Query: 369  catcacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctccttt 428
            |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1440 catcacatgtaaagaccctccggcacaccttccttcttcttgaacatcaccttctccttt 1381

                                            
Query: 429  gccttcttgaagtcggcgtgtgtcaccttcat 460
            |||||||||||||| || ||||||||||||||
Sbjct: 1380 gccttcttgaagtcagcatgtgtcaccttcat 1349
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>dbj|AK105861.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-A02, full
            insert sequence
          Length = 1599

 Score =  151 bits (76), Expect = 2e-33
 Identities = 88/92 (95%)
 Strand = Plus / Minus

                                                                        
Query: 369  catcacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctccttt 428
            |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1440 catcacatgtaaagaccctccggcacaccttccttcttcttgaacatcaccttctccttt 1381

                                            
Query: 429  gccttcttgaagtcggcgtgtgtcaccttcat 460
            |||||||||||||| || ||||||||||||||
Sbjct: 1380 gccttcttgaagtcagcatgtgtcaccttcat 1349
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>dbj|AK099264.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018C04, full
            insert sequence
          Length = 1597

 Score =  151 bits (76), Expect = 2e-33
 Identities = 88/92 (95%)
 Strand = Plus / Minus

                                                                        
Query: 369  catcacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctccttt 428
            |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1441 catcacatgtaaagaccctccggcacaccttccttcttcttgaacatcaccttctccttt 1382

                                            
Query: 429  gccttcttgaagtcggcgtgtgtcaccttcat 460
            |||||||||||||| || ||||||||||||||
Sbjct: 1381 gccttcttgaagtcagcatgtgtcaccttcat 1350
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>dbj|AK070759.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065N19, full
           insert sequence
          Length = 947

 Score =  151 bits (76), Expect = 2e-33
 Identities = 88/92 (95%)
 Strand = Plus / Minus

                                                                       
Query: 369 catcacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctccttt 428
           |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 741 catcacatgtaaagaccctccggcacaccttccttcttcttgaacatcaccttctccttt 682

                                           
Query: 429 gccttcttgaagtcggcgtgtgtcaccttcat 460
           |||||||||||||| || ||||||||||||||
Sbjct: 681 gccttcttgaagtcagcatgtgtcaccttcat 650
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>dbj|AK058311.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H11, full
            insert sequence
          Length = 1615

 Score =  151 bits (76), Expect = 2e-33
 Identities = 88/92 (95%)
 Strand = Plus / Minus

                                                                        
Query: 369  catcacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctccttt 428
            |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1440 catcacatgtaaagaccctccggcacaccttccttcttcttgaacatcaccttctccttt 1381

                                            
Query: 429  gccttcttgaagtcggcgtgtgtcaccttcat 460
            |||||||||||||| || ||||||||||||||
Sbjct: 1380 gccttcttgaagtcagcatgtgtcaccttcat 1349
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>dbj|D17789.1|RICHTBP2 Oryza sativa (japonica cultivar-group) mRNA for homologue of Tat
            binding protein, complete cds
          Length = 1609

 Score =  151 bits (76), Expect = 2e-33
 Identities = 88/92 (95%)
 Strand = Plus / Minus

                                                                        
Query: 369  catcacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctccttt 428
            |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1408 catcacatgtaaagaccctccggcacaccttccttcttcttgaacatcaccttctccttt 1349

                                            
Query: 429  gccttcttgaagtcggcgtgtgtcaccttcat 460
            |||||||||||||| || ||||||||||||||
Sbjct: 1348 gccttcttgaagtcagcatgtgtcaccttcat 1317
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  143 bits (72), Expect = 6e-31
 Identities = 84/88 (95%)
 Strand = Plus / Plus

                                                                            
Query: 369      catcacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctccttt 428
                |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 29382506 catcacatgtaaagaccctccggcacaccttccttcttcttgaacatcaccttctccttt 29382565

                                            
Query: 429      gccttcttgaagtcggcgtgtgtcacct 456
                |||||||||||||| || ||||||||||
Sbjct: 29382566 gccttcttgaagtcagcatgtgtcacct 29382593
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>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0034A04
          Length = 151263

 Score =  143 bits (72), Expect = 6e-31
 Identities = 84/88 (95%)
 Strand = Plus / Plus

                                                                         
Query: 369   catcacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctccttt 428
             |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 45428 catcacatgtaaagaccctccggcacaccttccttcttcttgaacatcaccttctccttt 45487

                                         
Query: 429   gccttcttgaagtcggcgtgtgtcacct 456
             |||||||||||||| || ||||||||||
Sbjct: 45488 gccttcttgaagtcagcatgtgtcacct 45515
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>dbj|AK069811.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030D05, full
            insert sequence
          Length = 1579

 Score =  133 bits (67), Expect = 6e-28
 Identities = 91/99 (91%)
 Strand = Plus / Minus

                                                                        
Query: 371  tcacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgc 430
            |||||| |||||||| ||||| |||||||||||||||||||||||||||||||| || ||
Sbjct: 1431 tcacatataaagcccttccggtacaccttccttcttcttgaacatgaccttctctttggc 1372

                                                   
Query: 431  cttcttgaagtcggcgtgtgtcaccttcatcctgcgctc 469
            ||||||||| ||||| |||||||||||||| ||||||||
Sbjct: 1371 cttcttgaaatcggcatgtgtcaccttcattctgcgctc 1333
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>dbj|AK058779.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-C01, full
           insert sequence
          Length = 651

 Score =  133 bits (67), Expect = 6e-28
 Identities = 91/99 (91%)
 Strand = Plus / Minus

                                                                       
Query: 371 tcacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgc 430
           |||||| |||||||| ||||| |||||||||||||||||||||||||||||||| || ||
Sbjct: 442 tcacatataaagcccttccggtacaccttccttcttcttgaacatgaccttctctttggc 383

                                                  
Query: 431 cttcttgaagtcggcgtgtgtcaccttcatcctgcgctc 469
           ||||||||| ||||| |||||||||||||| ||||||||
Sbjct: 382 cttcttgaaatcggcatgtgtcaccttcattctgcgctc 344
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>dbj|AB037154.1| Oryza sativa (japonica cultivar-group) OsRPT2b mRNA for 26S
            proteasome regulatory particle triple-A ATPase subunit2b,
            complete cds
          Length = 1616

 Score =  133 bits (67), Expect = 6e-28
 Identities = 91/99 (91%)
 Strand = Plus / Minus

                                                                        
Query: 371  tcacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgc 430
            |||||| |||||||| ||||| |||||||||||||||||||||||||||||||| || ||
Sbjct: 1375 tcacatataaagcccttccggtacaccttccttcttcttgaacatgaccttctctttggc 1316

                                                   
Query: 431  cttcttgaagtcggcgtgtgtcaccttcatcctgcgctc 469
            ||||||||| ||||| |||||||||||||| ||||||||
Sbjct: 1315 cttcttgaaatcggcatgtgtcaccttcattctgcgctc 1277
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  115 bits (58), Expect = 1e-22
 Identities = 79/86 (91%)
 Strand = Plus / Minus

                                                                            
Query: 371      tcacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgc 430
                |||||| |||||||| ||||| |||||||||||||||||||||||||||||||| || ||
Sbjct: 10437925 tcacatataaagcccttccggtacaccttccttcttcttgaacatgaccttctctttggc 10437866

                                          
Query: 431      cttcttgaagtcggcgtgtgtcacct 456
                ||||||||| ||||| ||||||||||
Sbjct: 10437865 cttcttgaaatcggcatgtgtcacct 10437840



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 252      aagaaaaggttacaaacaaatttg 275
                |||||||||| |||||||||||||
Sbjct: 34850685 aagaaaaggtaacaaacaaatttg 34850708
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>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0039F10, complete sequence
          Length = 139714

 Score =  115 bits (58), Expect = 1e-22
 Identities = 79/86 (91%)
 Strand = Plus / Minus

                                                                         
Query: 371   tcacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgc 430
             |||||| |||||||| ||||| |||||||||||||||||||||||||||||||| || ||
Sbjct: 94478 tcacatataaagcccttccggtacaccttccttcttcttgaacatgaccttctctttggc 94419

                                       
Query: 431   cttcttgaagtcggcgtgtgtcacct 456
             ||||||||| ||||| ||||||||||
Sbjct: 94418 cttcttgaaatcggcatgtgtcacct 94393
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  115 bits (58), Expect = 1e-22
 Identities = 79/86 (91%)
 Strand = Plus / Minus

                                                                            
Query: 371      tcacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgc 430
                |||||| |||||||| ||||| |||||||||||||||||||||||||||||||| || ||
Sbjct: 10436026 tcacatataaagcccttccggtacaccttccttcttcttgaacatgaccttctctttggc 10435967

                                          
Query: 431      cttcttgaagtcggcgtgtgtcacct 456
                ||||||||| ||||| ||||||||||
Sbjct: 10435966 cttcttgaaatcggcatgtgtcacct 10435941



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 252      aagaaaaggttacaaacaaatttg 275
                |||||||||| |||||||||||||
Sbjct: 34940757 aagaaaaggtaacaaacaaatttg 34940780
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>gb|AY108940.1| Zea mays PCO101909 mRNA sequence
          Length = 961

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 83/94 (88%)
 Strand = Plus / Minus

                                                                       
Query: 373 acatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgcct 432
           ||||||| || || ||||| |||||||||||||||||| |||| ||||||||||||||||
Sbjct: 720 acatgtagagaccatccggaacaccttccttcttcttgtacatcaccttctcctttgcct 661

                                             
Query: 433 tcttgaagtcggcgtgtgtcaccttcatcctgcg 466
           ||||||| || || || ||||||||||| |||||
Sbjct: 660 tcttgaaatctgcatgggtcaccttcattctgcg 627
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>gb|AY105318.1| Zea mays PCO073117 mRNA sequence
          Length = 866

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 70/79 (88%)
 Strand = Plus / Minus

                                                                       
Query: 384 ccctccggcacaccttccttcttcttgaacatgaccttctcctttgccttcttgaagtcg 443
           ||||||||||| ||||| |||||||||||||| ||||| || || |||||||||||||| 
Sbjct: 542 ccctccggcacgccttctttcttcttgaacataaccttttctttggccttcttgaagtct 483

                              
Query: 444 gcgtgtgtcaccttcatcc 462
           || || |||||||||||||
Sbjct: 482 gcatgcgtcaccttcatcc 464
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>ref|NM_127572.2| Arabidopsis thaliana ATP binding / ATPase/ hydrolase/
            nucleoside-triphosphatase/ nucleotide binding AT2G20140
            mRNA, complete cds
          Length = 1610

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 64/72 (88%)
 Strand = Plus / Minus

                                                                        
Query: 371  tcacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgc 430
            |||||||||||| || || || || ||||| |||||||||||||| ||||||||||| ||
Sbjct: 1368 tcacatgtaaagaccttcaggaactccttctttcttcttgaacataaccttctccttcgc 1309

                        
Query: 431  cttcttgaagtc 442
            ||||||||||||
Sbjct: 1308 cttcttgaagtc 1297
to top
>gb|AY056335.1| Arabidopsis thaliana putative 26S proteasome subunit 4 (At2g20140)
            mRNA, complete cds
          Length = 1363

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 64/72 (88%)
 Strand = Plus / Minus

                                                                        
Query: 371  tcacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgc 430
            |||||||||||| || || || || ||||| |||||||||||||| ||||||||||| ||
Sbjct: 1332 tcacatgtaaagaccttcaggaactccttctttcttcttgaacataaccttctccttcgc 1273

                        
Query: 431  cttcttgaagtc 442
            ||||||||||||
Sbjct: 1272 cttcttgaagtc 1261
to top
>gb|AY035072.1| Arabidopsis thaliana putative 26S proteasome subunit 4 (At2g20140)
            mRNA, complete cds
          Length = 1586

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 64/72 (88%)
 Strand = Plus / Minus

                                                                        
Query: 371  tcacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgc 430
            |||||||||||| || || || || ||||| |||||||||||||| ||||||||||| ||
Sbjct: 1350 tcacatgtaaagaccttcaggaactccttctttcttcttgaacataaccttctccttcgc 1291

                        
Query: 431  cttcttgaagtc 442
            ||||||||||||
Sbjct: 1290 cttcttgaagtc 1279
to top
>gb|AC006081.4| Arabidopsis thaliana chromosome 2 clone T2G17 map mi148, complete
             sequence
          Length = 97814

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                         
Query: 371   tcacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgc 430
             |||||||||||| || || || || ||||| |||||||||||||| ||||||||||| ||
Sbjct: 23895 tcacatgtaaagaccttcaggaactccttctttcttcttgaacataaccttctccttcgc 23954

                         
Query: 431   cttcttgaagtc 442
             ||||||||||||
Sbjct: 23955 cttcttgaagtc 23966
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>gb|AF372977.1|AF372977 Arabidopsis thaliana At2g20140/T2G17.6 mRNA, complete cds
          Length = 1578

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 64/72 (88%)
 Strand = Plus / Minus

                                                                        
Query: 371  tcacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgc 430
            |||||||||||| || || || || ||||| |||||||||||||| ||||||||||| ||
Sbjct: 1355 tcacatgtaaagaccttcaggaactccttctttcttcttgaacataaccttctccttcgc 1296

                        
Query: 431  cttcttgaagtc 442
            ||||||||||||
Sbjct: 1295 cttcttgaagtc 1284
to top
>gb|AY087584.1| Arabidopsis thaliana clone 36815 mRNA, complete sequence
          Length = 1478

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 64/72 (88%)
 Strand = Plus / Minus

                                                                        
Query: 371  tcacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgc 430
            |||||||||||| || || || || ||||| |||||||||||||| ||||||||||| ||
Sbjct: 1358 tcacatgtaaagaccttcaggaactccttctttcttcttgaacataaccttctccttcgc 1299

                        
Query: 431  cttcttgaagtc 442
            ||||||||||||
Sbjct: 1298 cttcttgaagtc 1287
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>gb|AY105631.1| Zea mays PCO101908 mRNA sequence
          Length = 1272

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                       
Query: 373 acatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgcct 432
           ||||||| || || ||||| |||||||||||||||||| |||| |||||||||||||| |
Sbjct: 989 acatgtagagaccatccggaacaccttccttcttcttgtacatcaccttctcctttgctt 930

                                       
Query: 433 tcttgaagtcggcgtgtgtcaccttcat 460
           ||||||| || || || ||||| |||||
Sbjct: 929 tcttgaaatctgcatgggtcactttcat 902
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>dbj|AK058808.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-C05, full
           insert sequence
          Length = 251

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 42/43 (97%)
 Strand = Plus / Minus

                                                      
Query: 369 catcacatgtaaagcccctccggcacaccttccttcttcttga 411
           |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 50  catcacatgtaaagaccctccggcacaccttccttcttcttga 8
to top
>ref|NM_119048.2| Arabidopsis thaliana RPT2A; ATPase AT4G29040 (RPT2A) mRNA, complete
            cds
          Length = 1574

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 396  ccttccttcttcttgaacatgaccttctcctttgccttcttgaagtcggcgtgtgtcacc 455
            ||||| |||||||||||||| |||||||||||||| |||||||| || |  |||||||||
Sbjct: 1373 ccttctttcttcttgaacataaccttctcctttgctttcttgaaatcaggatgtgtcacc 1314

                 
Query: 456  ttcat 460
            |||||
Sbjct: 1313 ttcat 1309
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>gb|AY034975.1| Arabidopsis thaliana putative 26S proteasome subunit 4 (At4g29040)
            mRNA, complete cds
          Length = 1590

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 396  ccttccttcttcttgaacatgaccttctcctttgccttcttgaagtcggcgtgtgtcacc 455
            ||||| |||||||||||||| |||||||||||||| |||||||| || |  |||||||||
Sbjct: 1373 ccttctttcttcttgaacataaccttctcctttgctttcttgaaatcaggatgtgtcacc 1314

                 
Query: 456  ttcat 460
            |||||
Sbjct: 1313 ttcat 1309
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>dbj|AB161192.1| Arabidopsis thaliana HLR mRNA for 26S proteasome subunit AtRPT2a,
            complete cds
          Length = 1574

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 396  ccttccttcttcttgaacatgaccttctcctttgccttcttgaagtcggcgtgtgtcacc 455
            ||||| |||||||||||||| |||||||||||||| |||||||| || |  |||||||||
Sbjct: 1373 ccttctttcttcttgaacataaccttctcctttgctttcttgaaatcaggatgtgtcacc 1314

                 
Query: 456  ttcat 460
            |||||
Sbjct: 1313 ttcat 1309
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>gb|AF123391.1|AF123391 Arabidopsis thaliana 26S proteasome AAA-ATPase subunit RPT2a (RPT2a)
            mRNA, complete cds
          Length = 1568

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 396  ccttccttcttcttgaacatgaccttctcctttgccttcttgaagtcggcgtgtgtcacc 455
            ||||| |||||||||||||| |||||||||||||| |||||||| || |  |||||||||
Sbjct: 1372 ccttctttcttcttgaacataaccttctcctttgctttcttgaaatcaggatgtgtcacc 1313

                 
Query: 456  ttcat 460
            |||||
Sbjct: 1312 ttcat 1308
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>emb|AJ291500.1|BNA291500 Brassica napus homologue of SPH gene, AT4g29040 gene and AT4g29100
            gene, clone SI13
          Length = 14775

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                        
Query: 373  acatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgcct 432
            |||||||||| || || || |||||||| ||||| |||||||| |||||||||||||| |
Sbjct: 4232 acatgtaaaggccttcaggaacaccttctttctttttgaacataaccttctcctttgctt 4173

                   
Query: 433  tcttgaa 439
            |||||||
Sbjct: 4172 tcttgaa 4166
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>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70
          Length = 198429

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                         
Query: 396   ccttccttcttcttgaacatgaccttctcctttgccttcttgaagtcggcgtgtgtcacc 455
             ||||| |||||||||||||| |||||||||||||| |||||||| || |  |||||||||
Sbjct: 42441 ccttctttcttcttgaacataaccttctcctttgctttcttgaaatcaggatgtgtcacc 42382

              
Query: 456   t 456
             |
Sbjct: 42381 t 42381
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>emb|AL078469.2|ATF25O24 Arabidopsis thaliana DNA chromosome 4, BAC clone F25O24 (ESSA project)
          Length = 97714

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                         
Query: 396   ccttccttcttcttgaacatgaccttctcctttgccttcttgaagtcggcgtgtgtcacc 455
             ||||| |||||||||||||| |||||||||||||| |||||||| || |  |||||||||
Sbjct: 67472 ccttctttcttcttgaacataaccttctcctttgctttcttgaaatcaggatgtgtcacc 67413

              
Query: 456   t 456
             |
Sbjct: 67412 t 67412
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>emb|AL078470.1|ATF19B15 Arabidopsis thaliana DNA chromosome 4, BAC clone F19B15 (ESSA project)
          Length = 101679

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                         
Query: 396   ccttccttcttcttgaacatgaccttctcctttgccttcttgaagtcggcgtgtgtcacc 455
             ||||| |||||||||||||| |||||||||||||| |||||||| || |  |||||||||
Sbjct: 25968 ccttctttcttcttgaacataaccttctcctttgctttcttgaaatcaggatgtgtcacc 25909

              
Query: 456   t 456
             |
Sbjct: 25908 t 25908
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>gb|DQ222507.1| Solanum tuberosum clone 115D06 26S proteasome subunit 4-like mRNA,
            complete cds
          Length = 1581

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 74/88 (84%)
 Strand = Plus / Minus

                                                                        
Query: 373  acatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgcct 432
            |||||||||| || || ||||| || || |||||||||||||| ||||| || |||||||
Sbjct: 1370 acatgtaaagtccttctggcactccctctttcttcttgaacatcaccttatcttttgcct 1311

                                        
Query: 433  tcttgaagtcggcgtgtgtcaccttcat 460
            ||||||| || || ||  ||||||||||
Sbjct: 1310 tcttgaaatctgcatgaatcaccttcat 1283
to top
>emb|AJ293726.1|BNA293726 Brassica napus homologue of AT4g29030 gene, homologue of SPH gene,
             homologue of AT4g29040 gene (pseudogene) and homologue of
             AT4g29060 gene (pseudogene, partial)
          Length = 15378

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                         
Query: 396   ccttccttcttcttgaacatgaccttctcctttgccttcttgaa 439
             ||||| |||||||||||||| |||||||||||||| ||||||||
Sbjct: 12811 ccttctttcttcttgaacataaccttctcctttgctttcttgaa 12768
to top
>emb|BX819727.1|CNS0A8HI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS20ZD02 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1465

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 44/48 (91%), Gaps = 1/48 (2%)
 Strand = Plus / Minus

                                                            
Query: 396  ccttccttcttcttgaac-atgaccttctcctttgccttcttgaagtc 442
            ||||| |||||||||||| || ||||||||||| ||||||||||||||
Sbjct: 1349 ccttctttcttcttgaactataaccttctccttcgccttcttgaagtc 1302
to top
>gb|AF432345.1| Tortula ruralis 26S proteasome regulatory subunit IV (RPT2) mRNA,
            complete cds
          Length = 1845

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                        
Query: 396  ccttccttcttcttgaacatgaccttctcctttgccttcttgaagtcggcgtgtgtcacc 455
            ||||||||||||||  |||| || ||||| || |||||||| || || ||||| ||||||
Sbjct: 1502 ccttccttcttcttatacatcactttctctttggccttcttaaaatcagcgtgcgtcacc 1443

                          
Query: 456  ttcatcctgcgctc 469
            ||||| | ||||||
Sbjct: 1442 ttcatacggcgctc 1429
to top
>gb|BC071538.1| Danio rerio proteasome (prosome, macropain) 26S subunit, ATPase, 1b,
            mRNA (cDNA clone MGC:86923 IMAGE:6905970), complete cds
          Length = 1521

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                        
Query: 399  tccttcttcttgaacatgaccttctcctttgccttcttgaagtcggcgtgtgtcaccttc 458
            |||| ||||||| |||  || |||||||| | ||||||||||||  |||  || ||||||
Sbjct: 1322 tcctgcttcttgtacagcacattctccttagacttcttgaagtcctcgttggtgaccttc 1263

                        
Query: 459  atcctgcgctct 470
            ||||||||||||
Sbjct: 1262 atcctgcgctct 1251
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>ref|NM_001002091.1| Danio rerio proteasome (prosome, macropain) 26S subunit, ATPase, 1b
            (psmc1b), mRNA
          Length = 1521

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                        
Query: 399  tccttcttcttgaacatgaccttctcctttgccttcttgaagtcggcgtgtgtcaccttc 458
            |||| ||||||| |||  || |||||||| | ||||||||||||  |||  || ||||||
Sbjct: 1322 tcctgcttcttgtacagcacattctccttagacttcttgaagtcctcgttggtgaccttc 1263

                        
Query: 459  atcctgcgctct 470
            ||||||||||||
Sbjct: 1262 atcctgcgctct 1251
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>emb|AL935145.12| Zebrafish DNA sequence from clone CH211-173B9 in linkage group 20,
             complete sequence
          Length = 157156

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                         
Query: 399   tccttcttcttgaacatgaccttctcctttgccttcttgaagtcggcgtgtgtcaccttc 458
             |||| ||||||| |||  || |||||||| | ||||||||||||  |||  || ||||||
Sbjct: 43787 tcctgcttcttgtacagcacattctccttagacttcttgaagtcctcgttggtgaccttc 43846

                         
Query: 459   atcctgcgctct 470
             ||||||||||||
Sbjct: 43847 atcctgcgctct 43858
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>gb|AY639765.1| Hordeum vulgare subsp. spontaneum cultivar PI 560558 FtsH-like
           protein gene, partial cds
          Length = 456

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 420 ttctcctttgccttcttgaag 440
           |||||||||||||||||||||
Sbjct: 333 ttctcctttgccttcttgaag 313
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>gb|AY639735.1| Hordeum vulgare subsp. spontaneum cultivar PI 466252 FtsH-like
           protein gene, partial cds
          Length = 459

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 420 ttctcctttgccttcttgaag 440
           |||||||||||||||||||||
Sbjct: 337 ttctcctttgccttcttgaag 317
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 420      ttctcctttgccttcttgaag 440
                |||||||||||||||||||||
Sbjct: 27342892 ttctcctttgccttcttgaag 27342912



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 214      agtacaacaaactattcaatt 234
                |||||||||||||||||||||
Sbjct: 26068395 agtacaacaaactattcaatt 26068375
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>dbj|AP003635.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0686E06
          Length = 150474

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 420   ttctcctttgccttcttgaag 440
             |||||||||||||||||||||
Sbjct: 85719 ttctcctttgccttcttgaag 85739
to top
>dbj|AP004008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OJ1226_A12
          Length = 113025

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 214    agtacaacaaactattcaatt 234
              |||||||||||||||||||||
Sbjct: 106253 agtacaacaaactattcaatt 106233
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>dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0062J02
          Length = 151636

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 214   agtacaacaaactattcaatt 234
             |||||||||||||||||||||
Sbjct: 47640 agtacaacaaactattcaatt 47620
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>ref|XM_312720.2| Anopheles gambiae str. PEST ENSANGP00000017106 (ENSANGG00000014617),
            partial mRNA
          Length = 1317

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 421  tctcctttgccttcttgaagtcggcgtgtgtcaccttcatcctgcgctc 469
            ||||||||| ||||||||||||  |||  ||||||||||| | ||||||
Sbjct: 1267 tctcctttgacttcttgaagtcctcgttggtcaccttcattcggcgctc 1219
to top
>dbj|AK072047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111G24, full
           insert sequence
          Length = 2183

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 420 ttctcctttgccttcttgaag 440
           |||||||||||||||||||||
Sbjct: 920 ttctcctttgccttcttgaag 900
to top
>dbj|AK064913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M12, full
            insert sequence
          Length = 2433

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 420  ttctcctttgccttcttgaag 440
            |||||||||||||||||||||
Sbjct: 1170 ttctcctttgccttcttgaag 1150
to top
>dbj|AK060805.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-F12, full
           insert sequence
          Length = 2276

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 420 ttctcctttgccttcttgaag 440
           |||||||||||||||||||||
Sbjct: 980 ttctcctttgccttcttgaag 960
to top
>gb|AC120871.12| Mus musculus chromosome 16, clone RP23-121E8, complete sequence
          Length = 218995

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   taagcttatgattcagtact 187
             ||||||||||||||||||||
Sbjct: 23460 taagcttatgattcagtact 23479
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>gb|AC137128.17| Mus musculus chromosome 3, clone RP24-271G16, complete sequence
          Length = 182140

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 244    ttcaggcgaagaaaaggttacaaa 267
              ||||||| ||||||||||||||||
Sbjct: 110920 ttcaggctaagaaaaggttacaaa 110943
to top
>gb|AC000121.1| Homo sapiens BAC clone CTA-249A12 from 7, complete sequence
          Length = 93163

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 315   aaatatattatcactacaca 334
             ||||||||||||||||||||
Sbjct: 85789 aaatatattatcactacaca 85808
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>gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genomic sequence, complete
             sequence
          Length = 164352

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 252   aagaaaaggttacaaacaaatttg 275
             |||||||||| |||||||||||||
Sbjct: 11965 aagaaaaggtaacaaacaaatttg 11942
to top
>ref|XM_948324.1| Theileria annulata strain Ankara hypothetical protein (TA10000)
            partial mRNA
          Length = 4785

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 236  tccaaccattcaggcgaagaaaag 259
            |||||||||||||||| |||||||
Sbjct: 2267 tccaaccattcaggcgcagaaaag 2290
to top
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 397     cttccttcttcttgaacatg 416
               ||||||||||||||||||||
Sbjct: 3367224 cttccttcttcttgaacatg 3367205



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 397     cttccttcttcttgaacatg 416
               ||||||||||||||||||||
Sbjct: 1614347 cttccttcttcttgaacatg 1614328
to top
>gb|AC009634.9| Homo sapiens chromosome 8, clone RP11-413C18, complete sequence
          Length = 205638

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 363    acaattcatcacatgtaaag 382
              ||||||||||||||||||||
Sbjct: 187125 acaattcatcacatgtaaag 187144
to top
>ref|NM_079745.2| Drosophila melanogaster Proteasome 26S subunit subunit 4 ATPase
            CG5289-RA (Pros26.4), mRNA
          Length = 1631

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 421  tctcctttgccttcttgaagtcggcgtgtgtcaccttcat 460
            ||||||||| ||||||||||||  |||  |||||||||||
Sbjct: 1469 tctcctttgacttcttgaagtcctcgttggtcaccttcat 1430
to top
>gb|AC087533.7| Homo sapiens, clone RP11-89A4, complete sequence
          Length = 154179

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 363   acaattcatcacatgtaaag 382
             ||||||||||||||||||||
Sbjct: 47373 acaattcatcacatgtaaag 47392
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>dbj|AK149418.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length
           enriched library, clone:C730007E04
           product:unclassifiable, full insert sequence
          Length = 3376

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 168 taagcttatgattcagtact 187
           ||||||||||||||||||||
Sbjct: 77  taagcttatgattcagtact 58
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>emb|AL935302.7| Zebrafish DNA sequence from clone DKEY-13N1 in linkage group 15,
             complete sequence
          Length = 152706

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    caactatggtgcaacagaac 50
             ||||||||||||||||||||
Sbjct: 33353 caactatggtgcaacagaac 33372
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>gb|AY058759.1| Drosophila melanogaster SD02658 full length cDNA
          Length = 1493

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 421  tctcctttgccttcttgaagtcggcgtgtgtcaccttcat 460
            ||||||||| ||||||||||||  |||  |||||||||||
Sbjct: 1353 tctcctttgacttcttgaagtcctcgttggtcaccttcat 1314
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>gb|AC000353.27| Homo sapiens Chromosome 11q13 BAC Clone 18h3, complete sequence
          Length = 233089

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 15    ttcaattatccagcaacaactatg 38
             |||| |||||||||||||||||||
Sbjct: 57105 ttcagttatccagcaacaactatg 57128
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>dbj|AK054399.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN
           full-length enriched library, clone:E330022H21
           product:unclassifiable, full insert sequence
          Length = 2197

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 168 taagcttatgattcagtact 187
           ||||||||||||||||||||
Sbjct: 886 taagcttatgattcagtact 867
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>gb|AC007929.8|AC007929 Drosophila melanogaster, chromosome 3R, region 95A-95C, BAC clone
             BACR05C11, complete sequence
          Length = 171376

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 421   tctcctttgccttcttgaagtcggcgtgtgtcaccttcat 460
             ||||||||| ||||||||||||  |||  |||||||||||
Sbjct: 95430 tctcctttgacttcttgaagtcctcgttggtcaccttcat 95469
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>gb|AC154285.2| Mus musculus BAC clone RP23-452P8 from chromosome 16, complete sequence
          Length = 183796

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 397    cttccttcttcttgaacatg 416
              ||||||||||||||||||||
Sbjct: 157914 cttccttcttcttgaacatg 157933
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>gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genomic sequence, complete
              sequence
          Length = 171376

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 252    aagaaaaggttacaaacaaatttg 275
              |||||||||| |||||||||||||
Sbjct: 164795 aagaaaaggtaacaaacaaatttg 164772
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>emb|AL672034.5| Mouse DNA sequence from clone RP23-461P10 on chromosome X, complete
              sequence
          Length = 199101

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 329    tacacaatgttgttctggta 348
              ||||||||||||||||||||
Sbjct: 179372 tacacaatgttgttctggta 179391
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>emb|BX248395.9| Zebrafish DNA sequence from clone CH211-213A13 in linkage group 22,
              complete sequence
          Length = 206668

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 66     caggttgcagcttatatttg 85
              ||||||||||||||||||||
Sbjct: 173254 caggttgcagcttatatttg 173235
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>gb|AC154408.2| Mus musculus BAC clone RP24-259A5 from 16, complete sequence
          Length = 158312

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 168    taagcttatgattcagtact 187
              ||||||||||||||||||||
Sbjct: 131132 taagcttatgattcagtact 131151
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>gb|AC127225.5| Mus musculus BAC clone RP24-499N1 from 3, complete sequence
          Length = 190949

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    atttgctcaacatcaacata 100
             ||||||||||||||||||||
Sbjct: 13773 atttgctcaacatcaacata 13754
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>emb|BX005052.6| Zebrafish DNA sequence from clone CH211-42O7 in linkage group 15,
              complete sequence
          Length = 177681

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     caactatggtgcaacagaac 50
              ||||||||||||||||||||
Sbjct: 131265 caactatggtgcaacagaac 131246
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>gb|AE003745.4| Drosophila melanogaster chromosome 3R, section 83 of 118 of the complete
              sequence
          Length = 230236

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                      
Query: 421    tctcctttgccttcttgaagtcggcgtgtgtcaccttcat 460
              ||||||||| ||||||||||||  |||  |||||||||||
Sbjct: 128322 tctcctttgacttcttgaagtcctcgttggtcaccttcat 128361
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>dbj|AP000944.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-867O8, complete
             sequence
          Length = 219246

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 15    ttcaattatccagcaacaactatg 38
             |||| |||||||||||||||||||
Sbjct: 10024 ttcagttatccagcaacaactatg 10047
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>gb|BC048953.1| Mus musculus zinc finger and BTB domain containing 20, mRNA (cDNA
           clone IMAGE:6484816)
          Length = 3171

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 168 taagcttatgattcagtact 187
           ||||||||||||||||||||
Sbjct: 862 taagcttatgattcagtact 843
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>emb|CT027660.1| Medicago truncatula chromosome 5 clone mth4-7a11, COMPLETE SEQUENCE
          Length = 107624

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   accttccttcttcttgaaca 414
             ||||||||||||||||||||
Sbjct: 91969 accttccttcttcttgaaca 91988
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>emb|AL954380.9| Mouse DNA sequence from clone RP23-156O9 on chromosome 2, complete
              sequence
          Length = 105996

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 166    tttaagcttatgattcagta 185
              ||||||||||||||||||||
Sbjct: 104441 tttaagcttatgattcagta 104422
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>gb|U39303.1|DMU39303 Drosophila melanogaster 26S proteasome subunit 4 ATPase mRNA,
            complete cds
          Length = 1497

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 421  tctcctttgccttcttgaagtcggcgtgtgtcaccttcat 460
            ||||||||| ||||||||||||  |||  |||||||||||
Sbjct: 1376 tctcctttgacttcttgaagtcctcgttggtcaccttcat 1337
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>emb|AL845319.10| Mouse DNA sequence from clone RP23-429I7 on chromosome 2, complete
           sequence
          Length = 150222

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 166 tttaagcttatgattcagta 185
           ||||||||||||||||||||
Sbjct: 445 tttaagcttatgattcagta 426
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>gb|AC161604.6| Mus musculus BAC clone RP23-245O13 from chromosome 3, complete sequence
          Length = 210802

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 81     atttgctcaacatcaacata 100
              ||||||||||||||||||||
Sbjct: 130687 atttgctcaacatcaacata 130668
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>dbj|AP001017.5| Homo sapiens genomic DNA, chromosome 18p clone:RP11-712C7, complete
              sequences
          Length = 131000

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 288    aaaccagggaatatatccca 307
              ||||||||||||||||||||
Sbjct: 111074 aaaccagggaatatatccca 111055


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,488,489
Number of Sequences: 3902068
Number of extensions: 4488489
Number of successful extensions: 110211
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 109866
Number of HSP's gapped (non-prelim): 344
length of query: 470
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 448
effective length of database: 17,147,199,772
effective search space: 7681945497856
effective search space used: 7681945497856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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