>C74A1_ORYSA (Q7Y0C8) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92)|
           (Allene oxide synthase 1) (Hydroperoxide dehydrase 1)
          Length = 512

 Score =  144 bits (364), Expect = 8e-35
 Identities = 68/82 (82%), Positives = 77/82 (93%)
 Frame = -1

Query: 459 VPDRFMGEDGERLLRYVVWSNGPESATPTLQDKQCAGKDFVVLIARLLVAEIFLRYDSFD 280
           VPDRF+GEDG RLLR+VVWSNGPE+A PTL DKQCAGKDFVVL+ARLL+ E+FLRYDSFD
Sbjct: 431 VPDRFLGEDGARLLRHVVWSNGPETAAPTLHDKQCAGKDFVVLVARLLLVELFLRYDSFD 490

Query: 279 VQVGSSPLGSSVTITSLKKATF 214
           V+VG+S LGSSVT+TSLKKATF
Sbjct: 491 VEVGTSTLGSSVTVTSLKKATF 512

>CP74A_ARATH (Q96242) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)|
           (Allene oxide synthase) (Hydroperoxide dehydrase)
          Length = 518

 Score =  130 bits (327), Expect = 2e-30
 Identities = 59/82 (71%), Positives = 75/82 (91%)
 Frame = -1

Query: 459 VPDRFMGEDGERLLRYVVWSNGPESATPTLQDKQCAGKDFVVLIARLLVAEIFLRYDSFD 280
           VP+RF+GE+GE+LLR+V+WSNGPE+ TPT+ +KQCAGKDFVVL+ARL V EIF RYDSFD
Sbjct: 437 VPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFD 496

Query: 279 VQVGSSPLGSSVTITSLKKATF 214
           ++VG+SPLGSSV  +SL+KA+F
Sbjct: 497 IEVGTSPLGSSVNFSSLRKASF 518

>C74A2_PARAR (Q40778) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase)|
           (Rubber particle protein) (RPP)
          Length = 473

 Score =  117 bits (293), Expect = 1e-26
 Identities = 54/81 (66%), Positives = 71/81 (87%)
 Frame = -1

Query: 459 VPDRFMGEDGERLLRYVVWSNGPESATPTLQDKQCAGKDFVVLIARLLVAEIFLRYDSFD 280
           VPDRF+G DGE LL+YV WSNGPE+ +PT+++KQCAGKDFVVLI RL V E+F RYDSF+
Sbjct: 393 VPDRFVG-DGEALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYDSFE 451

Query: 279 VQVGSSPLGSSVTITSLKKAT 217
           +++G SPLG++VT+T LK+A+
Sbjct: 452 IELGESPLGAAVTLTFLKRAS 472

>CP74_LINUS (P48417) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)|
           (Allene oxide synthase) (Hydroperoxide dehydrase)
          Length = 536

 Score =  116 bits (290), Expect = 3e-26
 Identities = 53/82 (64%), Positives = 71/82 (86%)
 Frame = -1

Query: 459 VPDRFMGEDGERLLRYVVWSNGPESATPTLQDKQCAGKDFVVLIARLLVAEIFLRYDSFD 280
           V DRF+GE G +L+ YV+WSNGPE+ TP++ +KQCAGKDFVV+ ARL V E+F RYDSFD
Sbjct: 456 VADRFVGE-GVKLMEYVMWSNGPETETPSVANKQCAGKDFVVMAARLFVVELFKRYDSFD 514

Query: 279 VQVGSSPLGSSVTITSLKKATF 214
           ++VG+S LG+S+T+TSLK++TF
Sbjct: 515 IEVGTSSLGASITLTSLKRSTF 536

>C74A2_ORYSA (Q7XYS3) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase|
           2) (Hydroperoxide dehydrase 2)
          Length = 478

 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 41/81 (50%), Positives = 57/81 (70%)
 Frame = -1

Query: 459 VPDRFMGEDGERLLRYVVWSNGPESATPTLQDKQCAGKDFVVLIARLLVAEIFLRYDSFD 280
           V DRF+GE+G +LL+YV WSNG E+  P++ +KQC GK+ VVL+ RLL+ E+FLRYD+F 
Sbjct: 395 VGDRFVGEEGRKLLQYVYWSNGRETENPSVDNKQCPGKNLVVLVGRLLLVELFLRYDTFT 454

Query: 279 VQVGSSPLGSSVTITSLKKAT 217
            +      G  V IT + KA+
Sbjct: 455 AEA-----GKKVVITGVTKAS 470

>C74A4_ORYSA (Q6Z6K9) Cytochrome P450 74A4 (EC 4.2.1.92) (Allene oxide synthase|
           4) (Hydroperoxide dehydrase 4)
          Length = 510

 Score = 84.7 bits (208), Expect = 1e-16
 Identities = 44/83 (53%), Positives = 54/83 (65%), Gaps = 3/83 (3%)
 Frame = -1

Query: 459 VPDRFM---GEDGERLLRYVVWSNGPESATPTLQDKQCAGKDFVVLIARLLVAEIFLRYD 289
           VPDRF+   G     LL +VVWSNGPE+ TP+  +KQC GKD VV + RL+VA +F RYD
Sbjct: 417 VPDRFVSGAGSAARPLLEHVVWSNGPETGTPSEGNKQCPGKDMVVAVGRLMVAGLFRRYD 476

Query: 288 SFDVQVGSSPLGSSVTITSLKKA 220
           +F   V   PL   VT TSL +A
Sbjct: 477 TFAADVEELPLEPVVTFTSLTRA 499

>C74A3_ORYSA (Q6Z6L1) Cytochrome P450 74A3 (EC 4.2.1.92) (Allene oxide synthase|
           3) (Hydroperoxide dehydrase 3)
          Length = 500

 Score = 83.2 bits (204), Expect = 3e-16
 Identities = 44/84 (52%), Positives = 58/84 (69%), Gaps = 3/84 (3%)
 Frame = -1

Query: 459 VPDRFM--GEDGER-LLRYVVWSNGPESATPTLQDKQCAGKDFVVLIARLLVAEIFLRYD 289
           V DRF+  G  G+R LL +VVWSNGPE+  P+  +KQC GKD VV + RL+VAE+F RYD
Sbjct: 415 VADRFVAGGAAGDRPLLEHVVWSNGPETRAPSEGNKQCPGKDMVVAVGRLMVAELFRRYD 474

Query: 288 SFDVQVGSSPLGSSVTITSLKKAT 217
           +F   V  +P+   VT TSL +A+
Sbjct: 475 TFAADVVEAPVEPVVTFTSLTRAS 498

>FUT3_HUMAN (P21217) Galactoside 3(4)-L-fucosyltransferase (EC 2.4.1.65) (Blood|
           group Lewis alpha-4-fucosyltransferase) (Lewis FT)
           (Fucosyltransferase 3) (FUCT-III)
          Length = 361

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
 Frame = -1

Query: 333 LIARLLVAEIFLRY--DSFDVQVGS--SPLGSSVTITSLKKATF*VLFWPWP 190
           L+ +LLVA  F  Y   S D   GS  +P GSS   T+  + T  +L W WP
Sbjct: 20  LLFQLLVAVCFFSYLRVSRDDATGSPRAPSGSSRQDTTPTRPTLLILLWTWP 71

>NRP1_RAT (Q9QWJ9) Neuropilin-1 precursor (Vascular endothelial cell growth|
           factor 165 receptor)
          Length = 922

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 11/67 (16%)
 Frame = -1

Query: 420 LRYVVWSNGPESA-----------TPTLQDKQCAGKDFVVLIARLLVAEIFLRYDSFDVQ 274
           +RY ++  GPE +           +P   +K     +   +I    ++EI L ++SFD++
Sbjct: 136 IRYEIFKRGPECSQNYTAPTGVIKSPGFPEKYPNSLECTYIIFAPKMSEIILEFESFDLE 195

Query: 273 VGSSPLG 253
             S+P G
Sbjct: 196 QDSNPPG 202

>HAK7_ORYSA (Q8H3P9) Potassium transporter 7 (OsHAK7)|
          Length = 811

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
 Frame = +2

Query: 47  QEKKFLLHKSSNTPCKSITCIV*YWYRSRRADEKN*V-HVAMSLAATAVGHGQKRTQKVA 223
           +++++L+ +      +   CIV Y Y+  + D++N   H+ MS+A       ++     +
Sbjct: 602 EDERYLIGRIGPREYRMYRCIVRYGYKDVQKDDENFENHLVMSIAKFIQMEAEEAASSGS 661

Query: 224 FLSE-----VMVTEDPSGEDPTCTSKES*RRKISATRRRAMSTTKSL 349
           + S      V+ TED +G         +     S TR     T +SL
Sbjct: 662 YESSEGRMAVIHTEDTTGTGLVMRDSNNEASGTSLTRSSRSETLRSL 708

>Y1632_PYRAE (Q8ZWT2) UPF0201 protein PAE1632|
          Length = 143

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 17/56 (30%), Positives = 26/56 (46%)
 Frame = -1

Query: 420 LRYVVWSNGPESATPTLQDKQCAGKDFVVLIARLLVAEIFLRYDSFDVQVGSSPLG 253
           LR  +W  G + A  ++  +   G+D VV       A  ++   SF  + G SPLG
Sbjct: 55  LRSAIWRQGIQDAARSVISRGIVGEDTVVFSVNKQAA--YVGVVSFVTEAGESPLG 108

>NRP1_HUMAN (O14786) Neuropilin-1 precursor (Vascular endothelial cell growth|
           factor 165 receptor) (CD304 antigen)
          Length = 923

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 11/67 (16%)
 Frame = -1

Query: 420 LRYVVWSNGPESA-----------TPTLQDKQCAGKDFVVLIARLLVAEIFLRYDSFDVQ 274
           +RY ++  GPE +           +P   +K     +   ++    ++EI L ++SFD++
Sbjct: 136 IRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAPKMSEIILEFESFDLE 195

Query: 273 VGSSPLG 253
             S+P G
Sbjct: 196 PDSNPPG 202

>C86A1_ARATH (P48422) Cytochrome P450 86A1 (EC 1.14.-.-) (CYPLXXXVI)|
           (P450-dependent fatty acid omega-hydroxylase)
          Length = 513

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
 Frame = -1

Query: 456 PDRFMGEDGERL------LRYVVWSNGPESATPTLQDKQCAGKDFVVLIARLLVAEIFLR 295
           P+R++  DGER        ++V ++ GP +         C GKD      + + + + LR
Sbjct: 426 PERWLTADGERFETPKDGYKFVAFNAGPRT---------CLGKDLAYNQMKSVASAVLLR 476

Query: 294 YDSFDV 277
           Y  F V
Sbjct: 477 YRVFPV 482

>RBLL_ARCFU (O28685) Ribulose bisphosphate carboxylase-like protein|
           (RuBisCO-like protein)
          Length = 437

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +1

Query: 1   GTNIIVHQGPWQKRPPGKEIFVTQILQHSMQVYHMHSVILVP 126
           G +I+V+  P+ K P  +E ++    QH    YH+     +P
Sbjct: 322 GADIVVYPAPYGKAPMMEEKYIEVAKQHRYPFYHIKPCFPMP 363

>HAS1_NEUCR (Q7S2N9) ATP-dependent RNA helicase has-1 (EC 3.6.1.-)|
          Length = 578

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
 Frame = -1

Query: 150 FFSSALLDRY-----QYYTMHVIDLHGVLEDLCNKN-FFSWRPFLPGTLVNYDVCA 1
           FFSS    +Y     QY  + V+DLHG  +     N FF +     GTL+  DV A
Sbjct: 359 FFSSCNSVKYYSELLQYIDLQVLDLHGKQKQQKRTNTFFEFCNAKQGTLICTDVAA 414

>RAD5_USTMA (Q4PGG5) DNA repair protein RAD5 (EC 3.6.1.-)|
          Length = 1387

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +2

Query: 230 SEVMVTEDPSGEDPTCTSKES*RRKISATRRRAMSTTKSLPAHC 361
           SE +    P  +D   ++  + R K S +   +++TTKS P HC
Sbjct: 168 SETVYKRSPPSDDVQASNGPAKRPKKSWSTPASVATTKSAPRHC 211


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,327,816
Number of Sequences: 219361
Number of extensions: 990952
Number of successful extensions: 2493
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2493
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)