>UMPK_ARATH (O04905) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate|
           kinase) (UMP kinase) (UMP/CMP kinase)
          Length = 202

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 23/40 (57%), Positives = 25/40 (62%)
 Frame = -2

Query: 473 RKRFKVFVESSLPVIEYYXXXXXXXXXXXXKPIPEVFEDV 354
           RKRFKVF+ESSLPVI YY            KPI  VFE+V
Sbjct: 150 RKRFKVFLESSLPVIHYYEAKGKVRKINAAKPIEAVFEEV 189

>UMPK_YEAST (P15700) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate|
           kinase) (UMP kinase)
          Length = 204

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -2

Query: 473 RKRFKVFVESSLPVIEYYXXXXXXXXXXXXKPIPEVFEDV 354
           +KRF  F E+S+PVIEY+            + + +V++DV
Sbjct: 157 KKRFNTFKETSMPVIEYFETKSKVVRVRCDRSVEDVYKDV 196

>RBL_CHRHI (P48692) Ribulose bisphosphate carboxylase large chain (EC|
           4.1.1.39) (RuBisCO large subunit) (Fragment)
          Length = 459

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +3

Query: 243 YM*SRLSKTLYEIIPFITFVVLYTVLCSLGKWGKNGFDIFKHL 371
           Y  +  +K L  II  I  V+ YT + S+GKW ++ +D+  HL
Sbjct: 226 YERANFAKELGSIIVMIDLVIGYTAIQSMGKWSRD-YDMILHL 267

>KAD_AQUAE (O66490) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)|
          Length = 206

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -2

Query: 473 RKRFKVFVESSLPVIEYYXXXXXXXXXXXXKPIPEVFEDV 354
           +KR +V+ E + P+IEYY            KP+ EV+  V
Sbjct: 159 KKRLEVYREQTAPLIEYYKKKGILRIIDASKPVEEVYRQV 198

>RBL_EMIHU (Q4G3F4) Ribulose bisphosphate carboxylase large chain (EC|
           4.1.1.39) (RuBisCO large subunit)
          Length = 488

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +3

Query: 243 YM*SRLSKTLYEIIPFITFVVLYTVLCSLGKWGKNGFDIFKHL 371
           Y  +  ++ L  +I  I  V+ YT + S+GKW ++  D+  HL
Sbjct: 255 YERANFARDLGSVIVMIDLVIGYTAIQSMGKWSRDN-DVILHL 296

>KAD_THETN (Q8R7X4) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)|
          Length = 221

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -2

Query: 470 KRFKVFVESSLPVIEYYXXXXXXXXXXXXKPIPEVFEDV 354
           KR +V+ + + P+I+YY            K I EVFED+
Sbjct: 170 KRLEVYEKETKPLIDYYTKKGILVNIDGNKSIDEVFEDI 208

>YBCM_ECOLI (P77634) Putative HTH-type transcriptional regulator ybcM|
          Length = 265

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +3

Query: 165 PDLIYCWQQIKLSTDK 212
           P+LIYCW+Q+K S  +
Sbjct: 113 PELIYCWEQLKTSVSR 128

>STC_DROME (P40798) Protein shuttle craft|
          Length = 1106

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 115 IPCSVPVPLCNLLQGRIRPCAH 50
           +PC    P+C L   RI PC H
Sbjct: 771 VPCGTKKPICKLPCSRIHPCDH 792

>TECT2_MOUSE (Q2MV57) Tectonic-2 precursor|
          Length = 700

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -1

Query: 114 SHVVYLYHCVIYCKDESDLVPMSYAAALQKIEFI 13
           S V + Y C + C+D++DL+P+S       +EFI
Sbjct: 589 STVTWQYQCGLTCEDKADLLPLS-----ASVEFI 617

>RBL_GALSU (P23755) Ribulose bisphosphate carboxylase large chain (EC|
           4.1.1.39) (RuBisCO large subunit)
          Length = 493

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = +3

Query: 243 YM*SRLSKTLYEIIPFITFVVLYTVLCSLGKWGKNGFDIFKHL 371
           Y  ++L+K L  +I  I  V+ YT + ++ KW ++  D+  HL
Sbjct: 260 YARAQLAKELGSVIIMIDLVIGYTAIQTMAKWARDN-DMILHL 301

>KAD_PRUAR (O24464) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)|
          Length = 231

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -2

Query: 473 RKRFKVFVESSLPVIEYYXXXXXXXXXXXXKPIPEVFEDV 354
           +KR ++F E + PVI YY              + E+FE V
Sbjct: 183 KKRLEIFDELNWPVINYYSQRGKLHKINAVGTVDEIFEKV 222


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,996,477
Number of Sequences: 219361
Number of extensions: 1397865
Number of successful extensions: 3163
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3163
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)