Clone Name | rbart55e03 |
---|---|
Clone Library Name | barley_pub |
>FLS_CITUN (Q9ZWQ9) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23)| (EC 1.14.11.9) (FLS) (CitFLS) Length = 335 Score = 38.1 bits (87), Expect = 0.010 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = -3 Query: 445 VHRVVTNAEKERLSLVLVYTLELETQLEPVSELVDDKRPARYMKIKLNDY 296 +HR N +K R+S + +T + P+ +LVDD+ P +Y K DY Sbjct: 276 LHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDY 325
>GAOX1_ORYSA (P93771) Gibberellin 20 oxidase 1 (EC 1.14.11.-) (Gibberellin C-20| oxidase 1) (GA 20-oxidase 1) (Os20ox) Length = 372 Score = 35.0 bits (79), Expect = 0.084 Identities = 17/42 (40%), Positives = 22/42 (52%) Frame = -3 Query: 445 VHRVVTNAEKERLSLVLVYTLELETQLEPVSELVDDKRPARY 320 +HR V N+ R SL E++T + P ELVDD P Y Sbjct: 289 LHRAVVNSTAPRRSLAFFLCPEMDTVVRPPEELVDDHHPRVY 330
>HY6H_HYONI (P24397) Hyoscyamine 6-dioxygenase (EC 1.14.11.11) (Hyoscyamine| 6-beta-hydroxylase) Length = 344 Score = 35.0 bits (79), Expect = 0.084 Identities = 14/54 (25%), Positives = 29/54 (53%) Frame = -3 Query: 445 VHRVVTNAEKERLSLVLVYTLELETQLEPVSELVDDKRPARYMKIKLNDYMEKY 284 +HRVVT+ ++R+S+ + + +EP EL++ P Y +++ + Y Sbjct: 273 IHRVVTDPTRDRVSIATLIGPDYSCTIEPAKELLNQDNPPLYKPYSYSEFADIY 326
>FLS_EUSGR (Q9M547) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23)| (EC 1.14.11.9) (FLS) Length = 334 Score = 33.9 bits (76), Expect = 0.19 Identities = 15/49 (30%), Positives = 27/49 (55%) Frame = -3 Query: 442 HRVVTNAEKERLSLVLVYTLELETQLEPVSELVDDKRPARYMKIKLNDY 296 HR N EK R+S + + ++ P+ +LV+++ PA++ K DY Sbjct: 276 HRTTVNKEKTRMSWPVFLEPPPDHEVGPIPKLVNEENPAKFKTKKYKDY 324
>DV4H_CATRO (O04847) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20)| Length = 401 Score = 32.7 bits (73), Expect = 0.42 Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 7/57 (12%) Frame = -3 Query: 442 HRVVTNAEKERLSLVLVYTLELETQ-------LEPVSELVDDKRPARYMKIKLNDYM 293 HRV+ N R+S+ + + ++ +TQ P+ EL+ ++ P Y ++ + D++ Sbjct: 324 HRVLANKVGPRISVAVAFGIKTQTQEGVSPRLYGPIKELISEENPPIYKEVTVKDFI 380
>ACCO1_BRAJU (Q09052) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4)| (ACC oxidase) (Ethylene-forming enzyme) (EFE) Length = 320 Score = 32.7 bits (73), Expect = 0.42 Identities = 17/54 (31%), Positives = 26/54 (48%) Frame = -3 Query: 445 VHRVVTNAEKERLSLVLVYTLELETQLEPVSELVDDKRPARYMKIKLNDYMEKY 284 +HRVVT E R+S+ Y + ++ P S L + Y +DYM+ Y Sbjct: 236 MHRVVTQKEGNRMSIASFYNPGSDAEISPASSLA--CKETEYPSFVFDDYMKLY 287
>ACCO_DENCR (Q9ZQZ1) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4)| (ACC oxidase) (Ethylene-forming enzyme) (EFE) Length = 318 Score = 32.7 bits (73), Expect = 0.42 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Frame = -3 Query: 445 VHRVVTNAEKERLSLVLVYTLELETQLEPVSELVD----DKRPARYMKIKLNDYMEKY 284 +HRVV R+S+ Y + + P ELV+ +K+ Y K DYM+ Y Sbjct: 231 MHRVVAQTNGNRMSIASFYNPGSDAVIFPAPELVEKEAAEKKKETYPKFVFEDYMKLY 288
>ACCO_ACTCH (P31237) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4)| (ACC oxidase) (Ethylene-forming enzyme) (EFE) Length = 319 Score = 31.6 bits (70), Expect = 0.93 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Frame = -3 Query: 445 VHRVVTNAEKERLSLVLVYTLELETQLEPVSELVD---DKRPARYMKIKLNDYMEKY 284 +HRV+ + R+S+ Y + + P LVD D++ Y K DYM+ Y Sbjct: 233 MHRVIAQPDGNRMSIASFYNPGSDAVMYPAPALVDKEEDQQKQVYPKFVFEDYMKLY 289
>G2OX1_ARATH (Q8LEA2) Gibberellin 2-beta-dioxygenase 1 (EC 1.14.11.13)| (Gibberellin 2-beta-hydroxylase 1) (Gibberellin 2-oxidase 1) (GA 2-oxidase 1) Length = 329 Score = 30.8 bits (68), Expect = 1.6 Identities = 13/56 (23%), Positives = 31/56 (55%) Frame = -3 Query: 442 HRVVTNAEKERLSLVLVYTLELETQLEPVSELVDDKRPARYMKIKLNDYMEKYHDT 275 HRV+ N +K R+S++ L ++ P++ L+D++ Y + ++Y +++ Sbjct: 254 HRVLANCKKSRVSMIYFAGPSLTQRIAPLTCLIDNEDERLYEEFTWSEYKNSTYNS 309
>G2OX3_ARATH (O64692) Gibberellin 2-beta-dioxygenase 3 (EC 1.14.11.13)| (Gibberellin 2-beta-hydroxylase 3) (Gibberellin 2-oxidase 3) (GA 2-oxidase 3) Length = 335 Score = 30.4 bits (67), Expect = 2.1 Identities = 15/49 (30%), Positives = 26/49 (53%) Frame = -3 Query: 442 HRVVTNAEKERLSLVLVYTLELETQLEPVSELVDDKRPARYMKIKLNDY 296 HRVVTN ++ R+S++ L ++ P+S LV + Y + + Y Sbjct: 259 HRVVTNTKRSRISMIYFAGPPLSEKIAPLSCLVPKQDDCLYNEFTWSQY 307
>G2OX2_PEA (Q9XHM5) Gibberellin 2-beta-dioxygenase 2 (EC 1.14.11.13)| (Gibberellin 2-beta-hydroxylase 2) (Gibberellin 2-oxidase 2) (GA 2-oxidase 2) Length = 345 Score = 30.4 bits (67), Expect = 2.1 Identities = 15/51 (29%), Positives = 24/51 (47%) Frame = -3 Query: 442 HRVVTNAEKERLSLVLVYTLELETQLEPVSELVDDKRPARYMKIKLNDYME 290 HRV+TN K R+S++ L + P+S++V P Y Y + Sbjct: 266 HRVLTNTTKPRMSMMYFAAPPLNWLISPLSKMVTAHSPCLYRPFTWAQYKQ 316
>GAOX1_ARATH (Q39110) Gibberellin 20 oxidase 1 (EC 1.14.11.-) (Gibberellin C-20| oxidase 1) (GA 20-oxidase 1) (AtGA20ox) Length = 377 Score = 30.0 bits (66), Expect = 2.7 Identities = 16/52 (30%), Positives = 25/52 (48%) Frame = -3 Query: 445 VHRVVTNAEKERLSLVLVYTLELETQLEPVSELVDDKRPARYMKIKLNDYME 290 +HR V N+E ER SL + + + P EL+D RY + ++E Sbjct: 302 LHRAVVNSESERKSLAFFLCPKKDRVVTPPRELLDSITSRRYPDFTWSMFLE 353
>G2OX7_ARATH (Q9C6I4) Gibberellin 2-beta-dioxygenase 7 (EC 1.14.11.13)| (Gibberellin 2-beta-hydroxylase 7) (Gibberellin 2-oxidase 7) (GA 2-oxidase 7) Length = 336 Score = 29.6 bits (65), Expect = 3.5 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Frame = -3 Query: 442 HRVVTNAEKERLSLVLVYTLELETQLEPVSELVDDKRPARYMKIKLNDYMEK-YHDTYAT 266 HRV++ A ER+S+ LET+++ P +Y + +Y E+ HD T Sbjct: 272 HRVISPANIERMSIAFFVCPYLETEIDCFG------YPKKYRRFSFREYKEQSEHDVKET 325 Query: 265 G 263 G Sbjct: 326 G 326
>ACCO2_LYCES (P07920) 1-aminocyclopropane-1-carboxylate oxidase 2 (EC 1.14.17.4)| (ACC oxidase 2) (Ethylene-forming enzyme) (EFE) (Protein GTOMA) Length = 316 Score = 29.6 bits (65), Expect = 3.5 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Frame = -3 Query: 445 VHRVVTNAEKERLSLVLVYTLELETQLEPVSELVDDKRPAR----YMKIKLNDYMEKY 284 +HRV+ + R+SL Y + + P LVD + Y K +DYM+ Y Sbjct: 233 MHRVIAQKDGTRMSLASFYNPGNDALIYPAPALVDKEAEEHNKQVYPKFMFDDYMKLY 290
>GAO1B_WHEAT (O04706) Gibberellin 20 oxidase 1-B (EC 1.14.11.-) (Gibberellin| C-20 oxidase 1-B) (GA 20-oxidase 1-B) (Ta20ox1B) (TaGA20ox1-B) Length = 365 Score = 29.3 bits (64), Expect = 4.6 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Frame = -3 Query: 445 VHRVVTNAEKERLSLVLVYTLELETQLEPVSELVDDKRPARYMKI---KLNDYMEKYH 281 +HR V N++ R SL E++ + P LVD P Y L D+ +K++ Sbjct: 279 LHRAVVNSKVPRKSLAFFLCPEMDKVVAPPGTLVDAANPRAYPDFTWRSLLDFTQKHY 336
>GAO1A_WHEAT (O04707) Gibberellin 20 oxidase 1-A (EC 1.14.11.-) (Gibberellin| C-20 oxidase 1-B) (GA 20-oxidase 1-A) (Ta20ox1A) (TaGA20ox1-A) Length = 365 Score = 29.3 bits (64), Expect = 4.6 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 3/58 (5%) Frame = -3 Query: 445 VHRVVTNAEKERLSLVLVYTLELETQLEPVSELVDDKRPARYMKI---KLNDYMEKYH 281 +HR V N+ R SL E++ + P LVD P Y L D+ +K++ Sbjct: 279 LHRAVVNSRVPRKSLAFFLCPEMDKVVAPPGTLVDASNPRAYPDFTWRSLLDFTQKHY 336
>ACKA_STAES (Q8CS60) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 417 Score = 29.3 bits (64), Expect = 4.6 Identities = 19/45 (42%), Positives = 26/45 (57%) Frame = -3 Query: 442 HRVVTNAEKERLSLVLVYTLELETQLEPVSELVDDKRPARYMKIK 308 HRVV E S+V+ T E+E+Q+E +SEL PA M I+ Sbjct: 89 HRVVHGGETFPKSVVV--TDEVESQIEELSELAPLHNPANLMGIR 131
>ACKA_STAEQ (Q5HNJ4) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 417 Score = 29.3 bits (64), Expect = 4.6 Identities = 19/45 (42%), Positives = 26/45 (57%) Frame = -3 Query: 442 HRVVTNAEKERLSLVLVYTLELETQLEPVSELVDDKRPARYMKIK 308 HRVV E S+V+ T E+E+Q+E +SEL PA M I+ Sbjct: 89 HRVVHGGETFPKSVVV--TDEVESQIEELSELAPLHNPANLMGIR 131
>PRKDC_HUMAN (P78527) DNA-dependent protein kinase catalytic subunit (EC 2.7.11.1)| (DNA-PK catalytic subunit) (DNA-PKcs) (DNPK1) (p460) Length = 4128 Score = 29.3 bits (64), Expect = 4.6 Identities = 13/47 (27%), Positives = 23/47 (48%) Frame = -3 Query: 148 FTYFPDFCVCTPHVKCWAACVVALNPNIKLIRCGQHTDVKDGIKLID 8 F++FP F C + C A +++L+P C GI+L++ Sbjct: 2848 FSFFPPFVSCIQDISCQHAALLSLDPAAVSAGCLASLQQPVGIRLLE 2894
>GAO1D_WHEAT (O04705) Gibberellin 20 oxidase 1-D (EC 1.14.11.-) (Gibberellin| C-20 oxidase 1-D) (GA 20-oxidase 1-D) (Ta20ox1D) (TaGA20ox1-D) (Protein Wga20) Length = 361 Score = 28.9 bits (63), Expect = 6.0 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 3/58 (5%) Frame = -3 Query: 445 VHRVVTNAEKERLSLVLVYTLELETQLEPVSELVDDKRPARYMKI---KLNDYMEKYH 281 +HR V N+ R SL E++ + P LVD P Y L D+ +K++ Sbjct: 279 LHRAVVNSRVPRKSLAFFLCPEMDKVVAPPGTLVDAANPRAYPDFTWRSLLDFTQKHY 336
>PTPRK_MOUSE (P35822) Receptor-type tyrosine-protein phosphatase kappa precursor| (EC 3.1.3.48) (Protein-tyrosine phosphatase kappa) (R-PTP-kappa) Length = 1457 Score = 28.5 bits (62), Expect = 7.9 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +2 Query: 116 STHTKIWEIGKNVNSLQTGQRKILHHRSYSASLHTSE 226 + H K+W +N + Q K ++HR ++AS E Sbjct: 222 AVHNKLWLQRRNGEDIPVAQTKNINHRRFAASFRLQE 258
>PTPRK_HUMAN (Q15262) Receptor-type tyrosine-protein phosphatase kappa precursor| (EC 3.1.3.48) (Protein-tyrosine phosphatase kappa) (R-PTP-kappa) Length = 1439 Score = 28.5 bits (62), Expect = 7.9 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +2 Query: 116 STHTKIWEIGKNVNSLQTGQRKILHHRSYSASLHTSE 226 + H K+W +N + Q K ++HR ++AS E Sbjct: 223 AVHNKLWLQRRNGEDIPVAQTKNINHRRFAASFRLQE 259
>G3OX1_ARATH (Q39103) Gibberellin 3-beta-dioxygenase 1 (EC 1.14.11.15)| (Gibberellin 3 beta-hydroxylase 1) (GA 3-oxidase 1) (AtGA3ox1) Length = 358 Score = 28.5 bits (62), Expect = 7.9 Identities = 12/51 (23%), Positives = 25/51 (49%) Frame = -3 Query: 445 VHRVVTNAEKERLSLVLVYTLELETQLEPVSELVDDKRPARYMKIKLNDYM 293 +HR N + RLS+ ++ + + ++ PV +LV Y + +Y+ Sbjct: 288 LHRARVNQTRARLSVAFLWGPQSDIKISPVPKLVSPVESPLYQSVTWKEYL 338 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,693,936 Number of Sequences: 219361 Number of extensions: 1337209 Number of successful extensions: 3687 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 3407 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3684 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2677159704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)