Clone Name | rbart55d11 |
---|---|
Clone Library Name | barley_pub |
>gb|AC016780.6| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar Nipponbare Clone OSJNBa0061K21 From Chromosome 10, complete sequence Length = 112721 Score = 89.7 bits (45), Expect = 8e-15 Identities = 132/161 (81%) Strand = Plus / Minus Query: 207 gatcaatggttggcgacgatctcctgcgccctggtctcataggtgaacttgtagtcgctc 266 ||||| |||||||||||||||||||| ||| ||||||| || ||||||||| ||| Sbjct: 16429 gatcagtggttggcgacgatctcctgagccttggtctcgtactcaaacttgtagctgctg 16370 Query: 267 tgcttggagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagc 326 | ||||||| ||||| ||||||||||| |||||||||||||| ||||||| ||| | Sbjct: 16369 accatggagctatccgctgaccagatgaacaaccccggcagcttcccctgccgctgcaac 16310 Query: 327 tccttggccgcggcgatgccttggtccggagagagcagccc 367 ||||| || ||||||| || || ||||| ||||||||||| Sbjct: 16309 tccttcgcgccggcgatcccctgctccggcgagagcagccc 16269 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 386 gccggtctgcaagctggcgagcaccttggcgccggggtagtagcccgtctgccggtcgta 445 |||||||| |||||||||||||||||| |||| ||||||| ||| |||| |||||| Sbjct: 28711 gccggtcttgaagctggcgagcaccttgccgcccgggtagttcgccgcctgctcgtcgta 28652 Query: 446 gaacatcacgtaggtctggacgtcggtgttg 476 |||||||||||| ||| | |||||||||||| Sbjct: 28651 gaacatcacgtacgtcggcacgtcggtgttg 28621 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 273 gagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagctccttg 332 ||||||||||||||||||||||| || ||||||||||| ||||||| ||| |||||| Sbjct: 28815 gagctgtccgccgaccagatgaacaatcccggcagcttcccctgccgctgcaactccttc 28756 Query: 333 gccgcggcgatgccttggtccggagagagcagccc 367 || ||||||| || || ||||| |||||||||| Sbjct: 28755 gctccggcgatcccctgctccggccagagcagccc 28721 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 387 ccggtctgcaagctggcgagcaccttggcgccggggtagtagcccgtctgccggtcgtag 446 ||||||| ||||||||||||| |||| ||||||||||| ||| |||| ||||||| Sbjct: 16258 ccggtcttgaagctggcgagcagcttgctgccggggtagttcgccgcctgctcgtcgtag 16199 Query: 447 aacatcacgtaggtctggacgtcggtgttgg 477 ||||||||||| ||| ||||||||||||| Sbjct: 16198 aacatcacgtacgtcgccacgtcggtgttgg 16168
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 89.7 bits (45), Expect = 8e-15 Identities = 132/161 (81%) Strand = Plus / Minus Query: 207 gatcaatggttggcgacgatctcctgcgccctggtctcataggtgaacttgtagtcgctc 266 ||||| |||||||||||||||||||| ||| ||||||| || ||||||||| ||| Sbjct: 14076791 gatcagtggttggcgacgatctcctgagccttggtctcgtactcaaacttgtagctgctg 14076732 Query: 267 tgcttggagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagc 326 | ||||||| ||||| ||||||||||| |||||||||||||| ||||||| ||| | Sbjct: 14076731 accatggagctatccgctgaccagatgaacaaccccggcagcttcccctgccgctgcaac 14076672 Query: 327 tccttggccgcggcgatgccttggtccggagagagcagccc 367 ||||| || ||||||| || || ||||| ||||||||||| Sbjct: 14076671 tccttcgcgccggcgatcccctgctccggcgagagcagccc 14076631 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 386 gccggtctgcaagctggcgagcaccttggcgccggggtagtagcccgtctgccggtcgta 445 |||||||| |||||||||||||||||| |||| ||||||| ||| |||| |||||| Sbjct: 14089073 gccggtcttgaagctggcgagcaccttgccgcccgggtagttcgccgcctgctcgtcgta 14089014 Query: 446 gaacatcacgtaggtctggacgtcggtgttg 476 |||||||||||| ||| | |||||||||||| Sbjct: 14089013 gaacatcacgtacgtcggcacgtcggtgttg 14088983 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 273 gagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagctccttg 332 ||||||||||||||||||||||| || ||||||||||| ||||||| ||| |||||| Sbjct: 14089177 gagctgtccgccgaccagatgaacaatcccggcagcttcccctgccgctgcaactccttc 14089118 Query: 333 gccgcggcgatgccttggtccggagagagcagccc 367 || ||||||| || || ||||| |||||||||| Sbjct: 14089117 gctccggcgatcccctgctccggccagagcagccc 14089083 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 387 ccggtctgcaagctggcgagcaccttggcgccggggtagtagcccgtctgccggtcgtag 446 ||||||| ||||||||||||| |||| ||||||||||| ||| |||| ||||||| Sbjct: 14076620 ccggtcttgaagctggcgagcagcttgctgccggggtagttcgccgcctgctcgtcgtag 14076561 Query: 447 aacatcacgtaggtctggacgtcggtgttgg 477 ||||||||||| ||| ||||||||||||| Sbjct: 14076560 aacatcacgtacgtcgccacgtcggtgttgg 14076530 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 gagcaccttggcgccggggt 423 |||||||||||||||||||| Sbjct: 13954792 gagcaccttggcgccggggt 13954811
>gb|AF296279.1|AF296279 Oryza sativa subsp. japonica class III chitinase (chib1) gene, complete cds Length = 1038 Score = 89.7 bits (45), Expect = 8e-15 Identities = 132/161 (81%) Strand = Plus / Minus Query: 207 gatcaatggttggcgacgatctcctgcgccctggtctcataggtgaacttgtagtcgctc 266 ||||| |||||||||||||||||||| ||| ||||||| || ||||||||| ||| Sbjct: 914 gatcagtggttggcgacgatctcctgagccttggtctcgtactcaaacttgtagctgctg 855 Query: 267 tgcttggagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagc 326 | ||||||| ||||| ||||||||||| |||||||||||||| ||||||| ||| | Sbjct: 854 accatggagctatccgctgaccagatgaacaaccccggcagcttcccctgccgctgcaac 795 Query: 327 tccttggccgcggcgatgccttggtccggagagagcagccc 367 ||||| || ||||||| || || ||||| ||||||||||| Sbjct: 794 tccttcgcgccggcgatcccctgctccggcgagagcagccc 754 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 387 ccggtctgcaagctggcgagcaccttggcgccggggtagtagcccgtctgccggtcgtag 446 ||||||| ||||||||||||| |||| ||||||||||| ||| |||| ||||||| Sbjct: 743 ccggtcttgaagctggcgagcagcttgctgccggggtagttcgccgcctgctcgtcgtag 684 Query: 447 aacatcacgtaggtctggacgtcggtgttgg 477 ||||||||||| ||| ||||||||||||| Sbjct: 683 aacatcacgtacgtcgccacgtcggtgttgg 653
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence Length = 144651 Score = 89.7 bits (45), Expect = 8e-15 Identities = 132/161 (81%) Strand = Plus / Minus Query: 207 gatcaatggttggcgacgatctcctgcgccctggtctcataggtgaacttgtagtcgctc 266 ||||| |||||||||||||||||||| ||| ||||||| || ||||||||| ||| Sbjct: 92920 gatcagtggttggcgacgatctcctgagccttggtctcgtactcaaacttgtagctgctg 92861 Query: 267 tgcttggagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagc 326 | ||||||| ||||| ||||||||||| |||||||||||||| ||||||| ||| | Sbjct: 92860 accatggagctatccgctgaccagatgaacaaccccggcagcttcccctgccgctgcaac 92801 Query: 327 tccttggccgcggcgatgccttggtccggagagagcagccc 367 ||||| || ||||||| || || ||||| ||||||||||| Sbjct: 92800 tccttcgcgccggcgatcccctgctccggcgagagcagccc 92760 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 386 gccggtctgcaagctggcgagcaccttggcgccggggtagtagcccgtctgccggtcgta 445 |||||||| |||||||||||||||||| |||| ||||||| ||| |||| |||||| Sbjct: 105202 gccggtcttgaagctggcgagcaccttgccgcccgggtagttcgccgcctgctcgtcgta 105143 Query: 446 gaacatcacgtaggtctggacgtcggtgttg 476 |||||||||||| ||| | |||||||||||| Sbjct: 105142 gaacatcacgtacgtcggcacgtcggtgttg 105112 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 273 gagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagctccttg 332 ||||||||||||||||||||||| || ||||||||||| ||||||| ||| |||||| Sbjct: 105306 gagctgtccgccgaccagatgaacaatcccggcagcttcccctgccgctgcaactccttc 105247 Query: 333 gccgcggcgatgccttggtccggagagagcagccc 367 || ||||||| || || ||||| |||||||||| Sbjct: 105246 gctccggcgatcccctgctccggccagagcagccc 105212 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 387 ccggtctgcaagctggcgagcaccttggcgccggggtagtagcccgtctgccggtcgtag 446 ||||||| ||||||||||||| |||| ||||||||||| ||| |||| ||||||| Sbjct: 92749 ccggtcttgaagctggcgagcagcttgctgccggggtagttcgccgcctgctcgtcgtag 92690 Query: 447 aacatcacgtaggtctggacgtcggtgttgg 477 ||||||||||| ||| ||||||||||||| Sbjct: 92689 aacatcacgtacgtcgccacgtcggtgttgg 92659
>dbj|AK104397.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C10, full insert sequence Length = 989 Score = 89.7 bits (45), Expect = 8e-15 Identities = 132/161 (81%) Strand = Plus / Minus Query: 207 gatcaatggttggcgacgatctcctgcgccctggtctcataggtgaacttgtagtcgctc 266 ||||| |||||||||||||||||||| ||| ||||||| || ||||||||| ||| Sbjct: 919 gatcagtggttggcgacgatctcctgagccttggtctcgtactcaaacttgtagctgctg 860 Query: 267 tgcttggagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagc 326 | ||||||| ||||| ||||||||||| |||||||||||||| ||||||| ||| | Sbjct: 859 accatggagctatccgctgaccagatgaacaaccccggcagcttcccctgccgctgcaac 800 Query: 327 tccttggccgcggcgatgccttggtccggagagagcagccc 367 ||||| || ||||||| || || ||||| ||||||||||| Sbjct: 799 tccttcgcgccggcgatcccctgctccggcgagagcagccc 759 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 387 ccggtctgcaagctggcgagcaccttggcgccggggtagtagcccgtctgccggtcgtag 446 ||||||| ||||||||||||| |||| ||||||||||| ||| |||| ||||||| Sbjct: 748 ccggtcttgaagctggcgagcagcttgctgccggggtagttcgccgcctgctcgtcgtag 689 Query: 447 aacatcacgtaggtctggacgtcggtgttgg 477 ||||||||||| ||| ||||||||||||| Sbjct: 688 aacatcacgtacgtcgccacgtcggtgttgg 658
>dbj|AK104202.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-C04, full insert sequence Length = 1053 Score = 89.7 bits (45), Expect = 8e-15 Identities = 132/161 (81%) Strand = Plus / Minus Query: 207 gatcaatggttggcgacgatctcctgcgccctggtctcataggtgaacttgtagtcgctc 266 ||||| |||||||||||||||||||| ||| ||||||| || ||||||||| ||| Sbjct: 919 gatcagtggttggcgacgatctcctgagccttggtctcgtactcaaacttgtagctgctg 860 Query: 267 tgcttggagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagc 326 | ||||||| ||||| ||||||||||| |||||||||||||| ||||||| ||| | Sbjct: 859 accatggagctatccgctgaccagatgaacaaccccggcagcttcccctgccgctgcaac 800 Query: 327 tccttggccgcggcgatgccttggtccggagagagcagccc 367 ||||| || ||||||| || || ||||| ||||||||||| Sbjct: 799 tccttcgcgccggcgatcccctgctccggcgagagcagccc 759 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 387 ccggtctgcaagctggcgagcaccttggcgccggggtagtagcccgtctgccggtcgtag 446 ||||||| ||||||||||||| |||| ||||||||||| ||| |||| ||||||| Sbjct: 748 ccggtcttgaagctggcgagcagcttgctgccggggtagttcgccgcctgctcgtcgtag 689 Query: 447 aacatcacgtaggtctggacgtcggtgttgg 477 ||||||||||| ||| ||||||||||||| Sbjct: 688 aacatcacgtacgtcgccacgtcggtgttgg 658
>dbj|AK104100.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-G07, full insert sequence Length = 1026 Score = 89.7 bits (45), Expect = 8e-15 Identities = 132/161 (81%) Strand = Plus / Minus Query: 207 gatcaatggttggcgacgatctcctgcgccctggtctcataggtgaacttgtagtcgctc 266 ||||| |||||||||||||||||||| ||| ||||||| || ||||||||| ||| Sbjct: 919 gatcagtggttggcgacgatctcctgagccttggtctcgtactcaaacttgtagctgctg 860 Query: 267 tgcttggagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagc 326 | ||||||| ||||| ||||||||||| |||||||||||||| ||||||| ||| | Sbjct: 859 accatggagctatccgctgaccagatgaacaaccccggcagcttcccctgccgctgcaac 800 Query: 327 tccttggccgcggcgatgccttggtccggagagagcagccc 367 ||||| || ||||||| || || ||||| ||||||||||| Sbjct: 799 tccttcgcgccggcgatcccctgctccggcgagagcagccc 759 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 387 ccggtctgcaagctggcgagcaccttggcgccggggtagtagcccgtctgccggtcgtag 446 ||||||| ||||||||||||| |||| ||||||||||| ||| |||| ||||||| Sbjct: 748 ccggtcttgaagctggcgagcagcttgctgccggggtagttcgccgcctgctcgtcgtag 689 Query: 447 aacatcacgtaggtctggacgtcggtgttgg 477 ||||||||||| ||| ||||||||||||| Sbjct: 688 aacatcacgtacgtcgccacgtcggtgttgg 658
>dbj|AK059767.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-G07, full insert sequence Length = 1069 Score = 89.7 bits (45), Expect = 8e-15 Identities = 132/161 (81%) Strand = Plus / Minus Query: 207 gatcaatggttggcgacgatctcctgcgccctggtctcataggtgaacttgtagtcgctc 266 ||||| |||||||||||||||||||| ||| ||||||| || ||||||||| ||| Sbjct: 919 gatcagtggttggcgacgatctcctgagccttggtctcgtactcaaacttgtagctgctg 860 Query: 267 tgcttggagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagc 326 | ||||||| ||||| ||||||||||| |||||||||||||| ||||||| ||| | Sbjct: 859 accatggagctatccgctgaccagatgaacaaccccggcagcttcccctgccgctgcaac 800 Query: 327 tccttggccgcggcgatgccttggtccggagagagcagccc 367 ||||| || ||||||| || || ||||| ||||||||||| Sbjct: 799 tccttcgcgccggcgatcccctgctccggcgagagcagccc 759 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 387 ccggtctgcaagctggcgagcaccttggcgccggggtagtagcccgtctgccggtcgtag 446 ||||||| ||||||||||||| |||| ||||||||||| ||| |||| ||||||| Sbjct: 748 ccggtcttgaagctggcgagcagcttgctgccggggtagttcgccgcctgctcgtcgtag 689 Query: 447 aacatcacgtaggtctggacgtcggtgttgg 477 ||||||||||| ||| ||||||||||||| Sbjct: 688 aacatcacgtacgtcgccacgtcggtgttgg 658
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 89.7 bits (45), Expect = 8e-15 Identities = 132/161 (81%) Strand = Plus / Minus Query: 207 gatcaatggttggcgacgatctcctgcgccctggtctcataggtgaacttgtagtcgctc 266 ||||| |||||||||||||||||||| ||| ||||||| || ||||||||| ||| Sbjct: 14085033 gatcagtggttggcgacgatctcctgagccttggtctcgtactcaaacttgtagctgctg 14084974 Query: 267 tgcttggagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagc 326 | ||||||| ||||| ||||||||||| |||||||||||||| ||||||| ||| | Sbjct: 14084973 accatggagctatccgctgaccagatgaacaaccccggcagcttcccctgccgctgcaac 14084914 Query: 327 tccttggccgcggcgatgccttggtccggagagagcagccc 367 ||||| || ||||||| || || ||||| ||||||||||| Sbjct: 14084913 tccttcgcgccggcgatcccctgctccggcgagagcagccc 14084873 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 386 gccggtctgcaagctggcgagcaccttggcgccggggtagtagcccgtctgccggtcgta 445 |||||||| |||||||||||||||||| |||| ||||||| ||| |||| |||||| Sbjct: 14097315 gccggtcttgaagctggcgagcaccttgccgcccgggtagttcgccgcctgctcgtcgta 14097256 Query: 446 gaacatcacgtaggtctggacgtcggtgttg 476 |||||||||||| ||| | |||||||||||| Sbjct: 14097255 gaacatcacgtacgtcggcacgtcggtgttg 14097225 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 273 gagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagctccttg 332 ||||||||||||||||||||||| || ||||||||||| ||||||| ||| |||||| Sbjct: 14097419 gagctgtccgccgaccagatgaacaatcccggcagcttcccctgccgctgcaactccttc 14097360 Query: 333 gccgcggcgatgccttggtccggagagagcagccc 367 || ||||||| || || ||||| |||||||||| Sbjct: 14097359 gctccggcgatcccctgctccggccagagcagccc 14097325 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 387 ccggtctgcaagctggcgagcaccttggcgccggggtagtagcccgtctgccggtcgtag 446 ||||||| ||||||||||||| |||| ||||||||||| ||| |||| ||||||| Sbjct: 14084862 ccggtcttgaagctggcgagcagcttgctgccggggtagttcgccgcctgctcgtcgtag 14084803 Query: 447 aacatcacgtaggtctggacgtcggtgttgg 477 ||||||||||| ||| ||||||||||||| Sbjct: 14084802 aacatcacgtacgtcgccacgtcggtgttgg 14084772 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 gagcaccttggcgccggggt 423 |||||||||||||||||||| Sbjct: 13962134 gagcaccttggcgccggggt 13962153
>ref|NM_196498.1| Oryza sativa (japonica cultivar-group) putative class III chitinase (OSJNBa0032I20.10), mRNA Length = 861 Score = 85.7 bits (43), Expect = 1e-13 Identities = 127/155 (81%) Strand = Plus / Minus Query: 213 tggttggcgacgatctcctgcgccctggtctcataggtgaacttgtagtcgctctgcttg 272 |||||||||||||||||||| ||| ||||||| || ||||||||| ||| | || Sbjct: 857 tggttggcgacgatctcctgagccttggtctcgtactcaaacttgtagctgctgaccatg 798 Query: 273 gagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagctccttg 332 ||||| ||||| ||||||||||| |||||||||||||| ||||||| ||| |||||| Sbjct: 797 gagctatccgctgaccagatgaacaaccccggcagcttcccctgccgctgcaactccttc 738 Query: 333 gccgcggcgatgccttggtccggagagagcagccc 367 || ||||||| || || ||||| ||||||||||| Sbjct: 737 gcgccggcgatcccctgctccggcgagagcagccc 703 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 387 ccggtctgcaagctggcgagcaccttggcgccggggtagtagcccgtctgccggtcgtag 446 ||||||| ||||||||||||| |||| ||||||||||| ||| |||| ||||||| Sbjct: 692 ccggtcttgaagctggcgagcagcttgctgccggggtagttcgccgcctgctcgtcgtag 633 Query: 447 aacatcacgtaggtctggacgtcggtgttgg 477 ||||||||||| ||| ||||||||||||| Sbjct: 632 aacatcacgtacgtcgccacgtcggtgttgg 602
>ref|NM_196501.1| Oryza sativa (japonica cultivar-group) putative class III chitinase (OSJNBa0032I20.12), mRNA Length = 867 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 386 gccggtctgcaagctggcgagcaccttggcgccggggtagtagcccgtctgccggtcgta 445 |||||||| |||||||||||||||||| |||| ||||||| ||| |||| |||||| Sbjct: 699 gccggtcttgaagctggcgagcaccttgccgcccgggtagttcgccgcctgctcgtcgta 640 Query: 446 gaacatcacgtaggtctggacgtcggtgttg 476 |||||||||||| ||| | |||||||||||| Sbjct: 639 gaacatcacgtacgtcggcacgtcggtgttg 609 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 273 gagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagctccttg 332 ||||||||||||||||||||||| || ||||||||||| ||||||| ||| |||||| Sbjct: 803 gagctgtccgccgaccagatgaacaatcccggcagcttcccctgccgctgcaactccttc 744 Query: 333 gccgcggcgatgccttggtccggagagagcagccc 367 || ||||||| || || ||||| |||||||||| Sbjct: 743 gctccggcgatcccctgctccggccagagcagccc 709
>dbj|AK119555.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-E12, full insert sequence Length = 1089 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 386 gccggtctgcaagctggcgagcaccttggcgccggggtagtagcccgtctgccggtcgta 445 |||||||| |||||||||||||||||| |||| ||||||| ||| |||| |||||| Sbjct: 723 gccggtcttgaagctggcgagcaccttgccgcccgggtagttcgccgcctgctcgtcgta 664 Query: 446 gaacatcacgtaggtctggacgtcggtgttg 476 |||||||||||| ||| | |||||||||||| Sbjct: 663 gaacatcacgtacgtcggcacgtcggtgttg 633 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 273 gagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagctccttg 332 ||||||||||||||||||||||| || ||||||||||| ||||||| ||| |||||| Sbjct: 827 gagctgtccgccgaccagatgaacaatcccggcagcttcccctgccgctgcaactccttc 768 Query: 333 gccgcggcgatgccttggtccggagagagcagccc 367 || ||||||| || || ||||| |||||||||| Sbjct: 767 gctccggcgatcccctgctccggccagagcagccc 733
>dbj|AK104292.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-F06, full insert sequence Length = 1108 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 386 gccggtctgcaagctggcgagcaccttggcgccggggtagtagcccgtctgccggtcgta 445 |||||||| |||||||||||||||||| |||| ||||||| ||| |||| |||||| Sbjct: 718 gccggtcttgaagctggcgagcaccttgccgcccgggtagttcgccgcctgctcgtcgta 659 Query: 446 gaacatcacgtaggtctggacgtcggtgttg 476 |||||||||||| ||| | |||||||||||| Sbjct: 658 gaacatcacgtacgtcggcacgtcggtgttg 628 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 273 gagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagctccttg 332 ||||||||||||||||||||||| || ||||||||||| ||||||| ||| |||||| Sbjct: 822 gagctgtccgccgaccagatgaacaatcccggcagcttcccctgccgctgcaactccttc 763 Query: 333 gccgcggcgatgccttggtccggagagagcagccc 367 || ||||||| || || ||||| |||||||||| Sbjct: 762 gctccggcgatcccctgctccggccagagcagccc 728
>dbj|AK104222.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E05, full insert sequence Length = 1069 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 386 gccggtctgcaagctggcgagcaccttggcgccggggtagtagcccgtctgccggtcgta 445 |||||||| |||||||||||||||||| |||| ||||||| ||| |||| |||||| Sbjct: 723 gccggtcttgaagctggcgagcaccttgccgcccgggtagttcgccgcctgctcgtcgta 664 Query: 446 gaacatcacgtaggtctggacgtcggtgttg 476 |||||||||||| ||| | |||||||||||| Sbjct: 663 gaacatcacgtacgtcggcacgtcggtgttg 633 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 273 gagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagctccttg 332 ||||||||||||||||||||||| || ||||||||||| ||||||| ||| |||||| Sbjct: 827 gagctgtccgccgaccagatgaacaatcccggcagcttcccctgccgctgcaactccttc 768 Query: 333 gccgcggcgatgccttggtccggagagagcagccc 367 || ||||||| || || ||||| |||||||||| Sbjct: 767 gctccggcgatcccctgctccggccagagcagccc 733
>dbj|AK099101.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025I19, full insert sequence Length = 1068 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 386 gccggtctgcaagctggcgagcaccttggcgccggggtagtagcccgtctgccggtcgta 445 |||||||| |||||||||||||||||| |||| ||||||| ||| |||| |||||| Sbjct: 722 gccggtcttgaagctggcgagcaccttgccgcccgggtagttcgccgcctgctcgtcgta 663 Query: 446 gaacatcacgtaggtctggacgtcggtgttg 476 |||||||||||| ||| | |||||||||||| Sbjct: 662 gaacatcacgtacgtcggcacgtcggtgttg 632 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 273 gagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagctccttg 332 ||||||||||||||||||||||| || ||||||||||| ||||||| ||| |||||| Sbjct: 826 gagctgtccgccgaccagatgaacaatcccggcagcttcccctgccgctgcaactccttc 767 Query: 333 gccgcggcgatgccttggtccggagagagcagccc 367 || ||||||| || || ||||| |||||||||| Sbjct: 766 gctccggcgatcccctgctccggccagagcagccc 732
>dbj|AK060033.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-H08, full insert sequence Length = 1134 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 386 gccggtctgcaagctggcgagcaccttggcgccggggtagtagcccgtctgccggtcgta 445 |||||||| |||||||||||||||||| |||| ||||||| ||| |||| |||||| Sbjct: 723 gccggtcttgaagctggcgagcaccttgccgcccgggtagttcgccgcctgctcgtcgta 664 Query: 446 gaacatcacgtaggtctggacgtcggtgttg 476 |||||||||||| ||| | |||||||||||| Sbjct: 663 gaacatcacgtacgtcggcacgtcggtgttg 633 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 273 gagctgtccgccgaccagatgaagaaccccggcagcttgttctgccgcagcagctccttg 332 ||||||||||||||||||||||| || ||||||||||| ||||||| ||| |||||| Sbjct: 827 gagctgtccgccgaccagatgaacaatcccggcagcttcccctgccgctgcaactccttc 768 Query: 333 gccgcggcgatgccttggtccggagagagcagccc 367 || ||||||| || || ||||| |||||||||| Sbjct: 767 gctccggcgatcccctgctccggccagagcagccc 733
>gb|AY553231.1| Pogonomyrmex snellingi voucher RAJ2663 elongation factor 1 alpha (EF-1a) gene, partial cds Length = 390 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccggt 391 ||||||||||||||||||||| Sbjct: 318 ctcctcggtggtcttgccggt 298
>gb|AF526291.1| Leptestheria dahalacensis elongation factor-1 alpha gene, partial cds Length = 1011 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccggt 391 ||||||||||||||||||||| Sbjct: 944 ctcctcggtggtcttgccggt 924
>gb|AF320456.1| Pseudomenopon carrikeri elongation factor-1 alpha gene, partial cds Length = 347 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccggt 391 ||||||||||||||||||||| Sbjct: 233 ctcctcggtggtcttgccggt 213
>gb|AF320417.1| Kurodaia sp. UT10 elongation factor-1 alpha gene, partial cds Length = 347 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccggt 391 ||||||||||||||||||||| Sbjct: 233 ctcctcggtggtcttgccggt 213
>gb|AF320411.1| Heptapsogaster minuta elongation factor-1 alpha gene, partial cds Length = 347 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccggt 391 ||||||||||||||||||||| Sbjct: 233 ctcctcggtggtcttgccggt 213
>gb|AF320391.1| Dennyus hirundinis isolate U1 elongation factor-1 alpha gene, partial cds Length = 347 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccggt 391 ||||||||||||||||||||| Sbjct: 233 ctcctcggtggtcttgccggt 213
>gb|AF320390.1| Dennyus hirundinis isolate G1 elongation factor-1 alpha gene, partial cds Length = 347 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccggt 391 ||||||||||||||||||||| Sbjct: 233 ctcctcggtggtcttgccggt 213
>gb|AF320389.1| Dennyus cypsiurus elongation factor-1 alpha gene, partial cds Length = 347 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccggt 391 ||||||||||||||||||||| Sbjct: 233 ctcctcggtggtcttgccggt 213
>gb|AF320364.1| Austromenopon merguli elongation factor-1 alpha gene, partial cds Length = 347 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccggt 391 ||||||||||||||||||||| Sbjct: 233 ctcctcggtggtcttgccggt 213
>gb|AF240791.1| Cleidogona major elongation factor-1alpha mRNA, partial cds Length = 1093 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccggt 391 ||||||||||||||||||||| Sbjct: 991 ctcctcggtggtcttgccggt 971
>gb|AF545798.1| Pseudomenopon rostratulae elongation factor 1-alpha gene, partial cds Length = 347 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccggt 391 ||||||||||||||||||||| Sbjct: 233 ctcctcggtggtcttgccggt 213
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 cagcagctccttggccgcggcgatg 344 ||||||||||||||||||| ||||| Sbjct: 223939 cagcagctccttggccgcgccgatg 223963
>gb|AE005788.1| Caulobacter crescentus CB15 section 114 of 359 of the complete genome Length = 13332 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 276 ctgtccgccgaccagatgaagaacc 300 ||||||||||||||||| ||||||| Sbjct: 8705 ctgtccgccgaccagatcaagaacc 8729
>gb|AF348661.1| Heptapsogaster minuta elongation factor-1 alpha gene, partial cds Length = 347 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccggt 391 ||||||||||||||||||||| Sbjct: 233 ctcctcggtggtcttgccggt 213
>gb|AF385032.1| Dennyus hirundinis nuclear elongation factor-1 alpha gene, partial cds Length = 348 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccggt 391 ||||||||||||||||||||| Sbjct: 234 ctcctcggtggtcttgccggt 214
>gb|AY585170.1| Plenoculus sp. Plsp810 elongation factor-1 alpha gene, partial cds Length = 1616 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccggt 391 ||||||||||||||||||||| Sbjct: 1512 ctcctcggtggtcttgccggt 1492
>gb|AY585166.1| Isodontia mexicana voucher Ismx838 elongation factor-1 alpha gene, partial cds Length = 1561 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccggt 391 ||||||||||||||||||||| Sbjct: 1457 ctcctcggtggtcttgccggt 1437
>gb|AY585161.1| Bicyrtes ventralis voucher Bivn813 elongation factor-1 alpha gene, partial cds Length = 1640 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccggt 391 ||||||||||||||||||||| Sbjct: 1536 ctcctcggtggtcttgccggt 1516
>gb|AF504532.1| Pseudopanurgus rugosus isolate 20 elongation factor alpha-1 gene, partial cds Length = 595 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccggt 391 ||||||||||||||||||||| Sbjct: 491 ctcctcggtggtcttgccggt 471
>gb|AF504530.1| Protandrena albitarsus isolate 92 elongation factor alpha-1 gene, partial cds Length = 589 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccggt 391 ||||||||||||||||||||| Sbjct: 486 ctcctcggtggtcttgccggt 466
>emb|X52884.1|AMEF1A1 Apis mellifera gene for cytoplasmic elongation factor 1 alpha (EF-1 alpha), exons 1-2 Length = 1958 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccggt 391 ||||||||||||||||||||| Sbjct: 1750 ctcctcggtggtcttgccggt 1730
>ref|NM_001011628.1| Apis mellifera translation elongation factor eEF-1 alpha chain (LOC408385), mRNA Length = 1397 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccggt 391 ||||||||||||||||||||| Sbjct: 1167 ctcctcggtggtcttgccggt 1147
>ref|XM_480513.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2127 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgaccagatgaagaacc 300 |||||||||||||||||||| Sbjct: 156 cgccgaccagatgaagaacc 137
>ref|XM_530166.1| PREDICTED: Pan troglodytes LOC457198 (LOC457198), mRNA Length = 970 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 cagcagctccttggccgcgg 339 |||||||||||||||||||| Sbjct: 665 cagcagctccttggccgcgg 646
>gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone BAC nbxb0045B21, complete sequence Length = 152397 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 gagcaccttggcgccggggt 423 |||||||||||||||||||| Sbjct: 123418 gagcaccttggcgccggggt 123437
>ref|XM_362636.1| Magnaporthe grisea 70-15 predicted protein (MG08413.4) partial mRNA Length = 360 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 aggtctggacgtcggtgttg 476 |||||||||||||||||||| Sbjct: 280 aggtctggacgtcggtgttg 261
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 tgaagaaccccggcagcttg 311 |||||||||||||||||||| Sbjct: 3442684 tgaagaaccccggcagcttg 3442665
>gb|DQ168719.1| Hermetia melanderi voucher CB0423 elongation factor-1 alpha gene, partial cds Length = 1010 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccgg 390 |||||||||||||||||||| Sbjct: 891 ctcctcggtggtcttgccgg 872
>gb|DQ168712.1| Chrysochlorina sp. CB0410 elongation factor-1 alpha gene, partial cds Length = 1054 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccgg 390 |||||||||||||||||||| Sbjct: 935 ctcctcggtggtcttgccgg 916
>gb|DQ168709.1| Raphiocera ornata voucher CB0406 elongation factor-1 alpha gene, partial cds Length = 1058 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccgg 390 |||||||||||||||||||| Sbjct: 939 ctcctcggtggtcttgccgg 920
>gb|DQ168689.1| Histiodroma sp. CB0301 elongation factor-1 alpha gene, partial cds Length = 1024 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccgg 390 |||||||||||||||||||| Sbjct: 939 ctcctcggtggtcttgccgg 920
>gb|DQ168685.1| Hermetia illucens voucher CB0222 elongation factor-1 alpha gene, partial cds Length = 1058 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccgg 390 |||||||||||||||||||| Sbjct: 939 ctcctcggtggtcttgccgg 920
>gb|AY553230.1| Pogonomyrmex laevinodis voucher RAJ2679 elongation factor 1 alpha (EF-1a) gene, partial cds Length = 448 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tcctcggtggtcttgccggt 391 |||||||||||||||||||| Sbjct: 317 tcctcggtggtcttgccggt 298
>gb|AY553229.1| Pogonomyrmex comanche voucher CPS174 elongation factor 1 alpha (EF-1a) gene, partial cds Length = 433 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tcctcggtggtcttgccggt 391 |||||||||||||||||||| Sbjct: 302 tcctcggtggtcttgccggt 283
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 gccgcagcagctccttggcc 335 |||||||||||||||||||| Sbjct: 808210 gccgcagcagctccttggcc 808229
>gb|BT011039.1| Drosophila melanogaster LP10071 full insert cDNA Length = 2720 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccgg 390 |||||||||||||||||||| Sbjct: 1923 ctcctcggtggtcttgccgg 1904
>emb|AJ829540.1| Themira biloba partial ef-1a gene for elongation factor-1 alpha, exon 1 Length = 746 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccgg 390 |||||||||||||||||||| Sbjct: 633 ctcctcggtggtcttgccgg 614
>emb|AJ829547.1| Themira superba partial ef-1a gene for elongation factor-1 alpha, exon 1 Length = 737 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccgg 390 |||||||||||||||||||| Sbjct: 624 ctcctcggtggtcttgccgg 605
>emb|AJ829546.1| Themira putris partial ef-1a gene for elongation factor-1 alpha, exon 1 Length = 1000 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccgg 390 |||||||||||||||||||| Sbjct: 906 ctcctcggtggtcttgccgg 887
>emb|AJ829545.1| Themira pusilla partial ef-1a gene for elongation factor-1 alpha, exon 1 Length = 755 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccgg 390 |||||||||||||||||||| Sbjct: 642 ctcctcggtggtcttgccgg 623
>emb|AJ829544.1| Themira nigricornis partial ef-1a gene for elongation factor-1 alpha, exon 1 Length = 740 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccgg 390 |||||||||||||||||||| Sbjct: 627 ctcctcggtggtcttgccgg 608
>emb|AJ829543.1| Themira minor partial ef-1a gene for elongation factor-1 alpha, exon 1 Length = 1000 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccgg 390 |||||||||||||||||||| Sbjct: 906 ctcctcggtggtcttgccgg 887
>emb|AJ829542.1| Themira lucida partial ef-1a gene for elongation factor-1 alpha, exon 1 Length = 762 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccgg 390 |||||||||||||||||||| Sbjct: 649 ctcctcggtggtcttgccgg 630
>emb|AJ829541.1| Themira flavicoxa partial ef-1a gene for elongation factor-1 alpha, exon 1 Length = 742 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccgg 390 |||||||||||||||||||| Sbjct: 629 ctcctcggtggtcttgccgg 610
>emb|AJ829539.1| Themira arctica partial ef-1a gene for elongation factor-1 alpha, exon 1 Length = 746 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccgg 390 |||||||||||||||||||| Sbjct: 641 ctcctcggtggtcttgccgg 622
>emb|AJ829534.1| Nemopoda nitidula partial ef-1a gene for elongation factor-1 alpha, exon 1 Length = 1000 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccgg 390 |||||||||||||||||||| Sbjct: 906 ctcctcggtggtcttgccgg 887
>gb|AF320354.1| Anaticola crassicornis elongation factor-1 alpha gene, partial cds Length = 347 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tcctcggtggtcttgccggt 391 |||||||||||||||||||| Sbjct: 232 tcctcggtggtcttgccggt 213
>emb|Z98747.1|HS37J18 Human DNA sequence from clone RP1-37J18 on chromosome 1p36.2-36.3 Contains two novel genes, complete sequence Length = 131427 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 agagagcagccccagctcct 375 |||||||||||||||||||| Sbjct: 99605 agagagcagccccagctcct 99586
>emb|AL391244.11| Human DNA sequence from clone RP4-758J18 on chromosome 1p36.31-36.33 Contains the 5' end of a novel gene, the CCNL2 gene for cyclin L2, the MRPL20 gene for mitochondrial ribosomal protein L20, nine novel genes and three CpG islands, complete sequence Length = 67923 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 cagcagctccttggccgcgg 339 |||||||||||||||||||| Sbjct: 18129 cagcagctccttggccgcgg 18110
>gb|AF545776.1| Anaticola crassicornis elongation factor 1-alpha gene, partial cds Length = 347 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tcctcggtggtcttgccggt 391 |||||||||||||||||||| Sbjct: 232 tcctcggtggtcttgccggt 213
>emb|X06869.1|DMEF1AF1 D. melanogaster elongation factor 1-alpha F1 gene Length = 4103 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccgg 390 |||||||||||||||||||| Sbjct: 3229 ctcctcggtggtcttgccgg 3210
>gb|AC009366.8| Drosophila melanogaster 3L BAC RP98-48E10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 169841 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 ttcatttcattcctgaacca 35 |||||||||||||||||||| Sbjct: 164970 ttcatttcattcctgaacca 164989
>gb|AC023676.4| Drosophila melanogaster 3L BAC RP98-22C11 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179613 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 ttcatttcattcctgaacca 35 |||||||||||||||||||| Sbjct: 118500 ttcatttcattcctgaacca 118519
>ref|NM_165850.1| Drosophila melanogaster Elongation factor 148D CG8280-RB, transcript variant B (Ef1alpha48D), mRNA Length = 2143 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccgg 390 |||||||||||||||||||| Sbjct: 1273 ctcctcggtggtcttgccgg 1254
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 371 ctcctcggtggtcttgccggtctg 394 ||||||||||| |||||||||||| Sbjct: 4307427 ctcctcggtggccttgccggtctg 4307450
>ref|NM_058027.3| Drosophila melanogaster Elongation factor 148D CG8280-RA, transcript variant A (Ef1alpha48D), mRNA Length = 2150 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccgg 390 |||||||||||||||||||| Sbjct: 1280 ctcctcggtggtcttgccgg 1261
>gb|AY089522.1| Drosophila melanogaster GM14559 full insert cDNA Length = 1815 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccgg 390 |||||||||||||||||||| Sbjct: 1009 ctcctcggtggtcttgccgg 990
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 320 cagcagctccttggccgcggcgat 343 |||| ||||||||||||||||||| Sbjct: 539986 cagctgctccttggccgcggcgat 540009
>gb|BC102258.1| Bos taurus similar to putative breast adenocarcinoma marker, mRNA (cDNA clone MGC:127087 IMAGE:7943199), complete cds Length = 935 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 gttctgccgcagcagctcct 330 |||||||||||||||||||| Sbjct: 225 gttctgccgcagcagctcct 206
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgaccagatgaagaacc 300 |||||||||||||||||||| Sbjct: 5537576 cgccgaccagatgaagaacc 5537557
>gb|AC007474.5|AC007474 Drosophila melanogaster, chromosome 2R, region 49A-49B, BAC clone BACR14L19, complete sequence Length = 192763 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccgg 390 |||||||||||||||||||| Sbjct: 12462 ctcctcggtggtcttgccgg 12443
>gb|AY048512.1| Neosciomyza luteipennis elongation factor-1 alpha (EF-1a) gene, partial cds Length = 994 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccgg 390 |||||||||||||||||||| Sbjct: 954 ctcctcggtggtcttgccgg 935
>dbj|AP004746.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0035F08 Length = 167446 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgaccagatgaagaacc 300 |||||||||||||||||||| Sbjct: 63804 cgccgaccagatgaagaacc 63785
>dbj|AK110033.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-160-A12, full insert sequence Length = 3789 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 gccgcagcagctccttggcc 335 |||||||||||||||||||| Sbjct: 2492 gccgcagcagctccttggcc 2473
>gb|AC005466.5|AC005466 Drosophila melanogaster, chromosome 2R, region 48C2-48C5, P1 clone DS03299, complete sequence Length = 72986 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccgg 390 |||||||||||||||||||| Sbjct: 39065 ctcctcggtggtcttgccgg 39046
>gb|AE003824.3| Drosophila melanogaster chromosome 2R, section 26 of 73 of the complete sequence Length = 268836 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccgg 390 |||||||||||||||||||| Sbjct: 167806 ctcctcggtggtcttgccgg 167787
>gb|AE003597.4| Drosophila melanogaster chromosome 3L, section 78 of 83 of the complete sequence Length = 365612 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 ttcatttcattcctgaacca 35 |||||||||||||||||||| Sbjct: 297862 ttcatttcattcctgaacca 297881
>gb|AF504528.1| Panurgus polytrichus isolate 30.3 clone 3 elongation factor alpha-1 gene, partial cds Length = 600 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tcctcggtggtcttgccggt 391 |||||||||||||||||||| Sbjct: 495 tcctcggtggtcttgccggt 476
>gb|BT001873.1| Drosophila melanogaster SD08285 full insert cDNA Length = 1952 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccgg 390 |||||||||||||||||||| Sbjct: 1201 ctcctcggtggtcttgccgg 1182
>ref|NM_001034550.1| Bos taurus similar to putative breast adenocarcinoma marker (MGC127087), mRNA Length = 935 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 gttctgccgcagcagctcct 330 |||||||||||||||||||| Sbjct: 225 gttctgccgcagcagctcct 206
>gb|M11744.1|DROF1GA D.melanogaster 50 kDa protein F1 gene, complete cds Length = 2241 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ctcctcggtggtcttgccgg 390 |||||||||||||||||||| Sbjct: 1367 ctcctcggtggtcttgccgg 1348 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,089,325 Number of Sequences: 3902068 Number of extensions: 3089325 Number of successful extensions: 71403 Number of sequences better than 10.0: 87 Number of HSP's better than 10.0 without gapping: 87 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71001 Number of HSP's gapped (non-prelim): 402 length of query: 477 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 455 effective length of database: 17,147,199,772 effective search space: 7801975896260 effective search space used: 7801975896260 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)