Clone Name | rbart55c06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ATL1M_ARATH (P0C035) Putative RING-H2 finger protein ATL1M | 32 | 0.68 | 2 | ATL5C_ARATH (Q5EAE9) RING-H2 finger protein ATL5C precursor | 30 | 3.4 |
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>ATL1M_ARATH (P0C035) Putative RING-H2 finger protein ATL1M| Length = 310 Score = 32.0 bits (71), Expect = 0.68 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = -1 Query: 256 LSCDVCILCLVADLPPLKTMSLLPRLRYFIEQQKLNMWAKRITLFKLCN*TVGRVGEEAN 77 L C VC+ +DL +LPR + ++MW + + LC TVG V + + Sbjct: 118 LECAVCL----SDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTVGSVEDTTH 173 Query: 76 GG 71 GG Sbjct: 174 GG 175
>ATL5C_ARATH (Q5EAE9) RING-H2 finger protein ATL5C precursor| Length = 407 Score = 29.6 bits (65), Expect = 3.4 Identities = 19/80 (23%), Positives = 32/80 (40%) Frame = -1 Query: 268 HEYELSCDVCILCLVADLPPLKTMSLLPRLRYFIEQQKLNMWAKRITLFKLCN*TVGRVG 89 H+ L C VC+ A P + + LLP+ ++ + ++ W + LC V Sbjct: 140 HKDGLECAVCL----ARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPED 195 Query: 88 EEANGGYHRWLSLYMAKQSS 29 G + W L +K S Sbjct: 196 ILLIGDCNSWFELQFSKDES 215 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,460,278 Number of Sequences: 219361 Number of extensions: 1345799 Number of successful extensions: 3155 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 3097 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3155 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)