ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart55b11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197728.1| Oryza sativa (japonica cultivar-group) putative... 54 4e-04
2dbj|AK065705.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
3dbj|AK064149.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
4ref|NM_129174.2| Arabidopsis thaliana structural constituent of ... 44 0.43
5gb|AF465512.1| Human coxsackievirus A15 strain G-9, complete genome 44 0.43
6gb|AF499638.1| Human coxsackievirus A15 strain G9, complete genome 44 0.43
7gb|AC007135.8| Arabidopsis thaliana chromosome 2 clone F9C22 map... 44 0.43
8gb|AY088120.1| Arabidopsis thaliana clone 41471 mRNA, complete s... 44 0.43
9gb|AC161119.3| Mus musculus BAC clone RP23-32J13 from chromosome... 42 1.7
10gb|AC113126.10| Mus musculus chromosome 6, clone RP23-352D5, com... 42 1.7
11emb|AL162373.16| Human DNA sequence from clone RP11-272M24 on ch... 42 1.7
12emb|AL158065.7| Human DNA sequence from clone RP11-64I8 on chrom... 42 1.7
13emb|CR932040.2| Medicago truncatula chromosome 5 clone mth2-55h1... 42 1.7
14gb|AC109203.9| Mus musculus chromosome 18, clone RP23-2B18, comp... 42 1.7
15emb|BX005265.6| Zebrafish DNA sequence from clone CH211-254O16 i... 42 1.7
16emb|AL929337.9| Zebrafish DNA sequence from clone CH211-138N21 i... 42 1.7
17gb|AC121870.2| Mus musculus chromosome 9 clone RP24-121D5, compl... 40 6.8
18ref|XM_637787.1| Dictyostelium discoideum hypothetical protein (... 40 6.8
19gb|AC139129.10| Mus musculus chromosome 1, clone RP24-245K18, co... 40 6.8
20gb|AC159260.3| Mus musculus BAC clone RP24-85M18 from chromosome... 40 6.8
21gb|AC125192.3| Mus musculus BAC clone RP23-266B4 from chromosome... 40 6.8
22gb|AC162893.6| Mus musculus chromosome 7, clone RP23-419K14, com... 40 6.8
23gb|AC115581.3| Dictyostelium discoideum chromosome 2 map complem... 40 6.8
24gb|AC140841.2| Mus musculus BAC clone RP24-470M20 from chromosom... 40 6.8
25gb|AC117186.3| Mus musculus BAC clone RP23-37O6 from 1, complete... 40 6.8
26gb|AC004448.4| Homo sapiens chromosome 17, clone CTB-187M2, comp... 40 6.8
27emb|AL360267.10| Human DNA sequence from clone RP11-342C20 on ch... 40 6.8
28emb|BX119321.4| Human DNA sequence from clone RP5-908D6 on chrom... 40 6.8
29emb|AL450244.11| Human DNA sequence from clone RP11-152M20 on ch... 40 6.8
30gb|AC098689.2| Homo sapiens chromosome 1 clone RP11-56N17, compl... 40 6.8
31emb|AL035698.12|HS69B13 Human DNA sequence from clone RP1-69B13 ... 40 6.8
32emb|AL078459.8|HSA123M24 Human DNA sequence from clone RP4-621F1... 40 6.8
33emb|AL034557.8|PFMAL4P1 Plasmodium falciparum MAL4P1 40 6.8
34emb|AL023777.1|SPCC1827 S.pombe chromosome III cosmid c1827 40 6.8
35gb|AC116303.6| Homo sapiens 3 BAC RP11-276B15 (Roswell Park Canc... 40 6.8
36emb|CR759946.5| Zebrafish DNA sequence from clone DKEY-79C1 in l... 40 6.8
37ref|NM_205459.1| Gallus gallus myosin, light polypeptide kinase ... 40 6.8
38emb|X52876.1|GGFMYLCK G.gallus mRNA for fibroblast myosin light ... 40 6.8
39gb|AC025627.13| Homo sapiens chromosome 17, clone RP11-1113L8, c... 40 6.8
40ref|NM_080169.2| Drosophila melanogaster Ecdysone-inducible gene... 40 6.8
41gb|AC021733.12| Homo sapiens chromosome 8, clone RP11-775B15, co... 40 6.8
42gb|AC090451.6| Homo sapiens chromosome 8, clone RP11-318N11, com... 40 6.8
43gb|AY061140.1| Drosophila melanogaster LD11958 full length cDNA 40 6.8
44emb|BX950237.2| Gallus gallus finished cDNA, clone ChEST704b4 40 6.8
45emb|BX088654.11| Zebrafish DNA sequence from clone CH211-195H6 i... 40 6.8
46ref|NM_069973.2| Caenorhabditis elegans F08G5.6 (F08G5.6) mRNA, ... 40 6.8
47gb|AC008093.4|AC008093 Drosophila melanogaster, chromosome 3R, r... 40 6.8
48gb|AC083906.23| Homo sapiens 3 BAC RP11-93K22 (Roswell Park Canc... 40 6.8
49emb|AL593846.15| Mouse DNA sequence from clone RP23-171H16 on ch... 40 6.8
50emb|BX510916.7| Zebrafish DNA sequence from clone DKEY-208B17 in... 40 6.8
51emb|BX000987.6| Zebrafish DNA sequence from clone CH211-130P10 i... 40 6.8
52emb|BX005217.5| Zebrafish DNA sequence from clone CH211-87L3 in ... 40 6.8
53emb|Z22872.1|GMLEAPROA G.max Lea protein mRNA, complete CDS 40 6.8
54gb|AE003677.3| Drosophila melanogaster chromosome 3R, section 15... 40 6.8
55gb|AC122516.4| Mus musculus BAC clone RP24-458M4 from chromosome... 40 6.8
56dbj|AP000795.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 6.8
57emb|AL929516.15| Zebrafish DNA sequence from clone CH211-10C20 i... 40 6.8
58gb|AF045256.1|GGMLCK02 Gallus gallus smooth muscle/non-muscle my... 40 6.8
59gb|AC140214.3| Mus musculus BAC clone RP23-479G14 from 1, comple... 40 6.8
60gb|AC145565.4| Mus musculus BAC clone RP24-485M14 from 3, comple... 40 6.8
61emb|AL672298.4| Mouse DNA sequence from clone RP23-456D8 on chro... 40 6.8
62emb|AL772292.10| Mouse DNA sequence from clone RP23-109C16 on ch... 40 6.8
63emb|AL355818.13| Human DNA sequence from clone RP4-667C9 on chro... 40 6.8 
>ref|NM_197728.1| Oryza sativa (japonica cultivar-group) putative ethylene-forming
           enzyme (OSJNBa0042H09.21), mRNA
          Length = 1044

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 438 ctgtgctcaatgctttggtactttccatttgtcaatatctcaagaaagtcaccaacatt 496
           ||||||||||| || | |||||| |||||||| |  |||||||||| ||||||||||||
Sbjct: 830 ctgtgctcaatactcttgtacttgccatttgtgaggatctcaagaatgtcaccaacatt 772
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>dbj|AK065705.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013035F20, full
            insert sequence
          Length = 2682

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                       
Query: 438  ctgtgctcaatgctttggtactttccatttgtcaatatctcaagaaagtcaccaacatt 496
            ||||||||||| || | |||||| |||||||| |  |||||||||| ||||||||||||
Sbjct: 2206 ctgtgctcaatactcttgtacttgccatttgtgaggatctcaagaatgtcaccaacatt 2148
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>dbj|AK064149.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-D01, full
            insert sequence
          Length = 2446

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                       
Query: 438  ctgtgctcaatgctttggtactttccatttgtcaatatctcaagaaagtcaccaacatt 496
            ||||||||||| || | |||||| |||||||| |  |||||||||| ||||||||||||
Sbjct: 2060 ctgtgctcaatactcttgtacttgccatttgtgaggatctcaagaatgtcaccaacatt 2002
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>ref|NM_129174.2| Arabidopsis thaliana structural constituent of ribosome AT2G36160
           mRNA, complete cds
          Length = 750

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 7   caacatttttctactttgatat 28
           ||||||||||||||||||||||
Sbjct: 683 caacatttttctactttgatat 704
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>gb|AF465512.1| Human coxsackievirus A15 strain G-9, complete genome
          Length = 7441

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 134  accaaagtggagcagggcaaat 155
            ||||||||||||||||||||||
Sbjct: 6483 accaaagtggagcagggcaaat 6504
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>gb|AF499638.1| Human coxsackievirus A15 strain G9, complete genome
          Length = 7441

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 134  accaaagtggagcagggcaaat 155
            ||||||||||||||||||||||
Sbjct: 6483 accaaagtggagcagggcaaat 6504
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>gb|AC007135.8| Arabidopsis thaliana chromosome 2 clone F9C22 map g6825, complete
             sequence
          Length = 31733

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 7     caacatttttctactttgatat 28
             ||||||||||||||||||||||
Sbjct: 21676 caacatttttctactttgatat 21697
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>gb|AY088120.1| Arabidopsis thaliana clone 41471 mRNA, complete sequence
          Length = 716

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 7   caacatttttctactttgatat 28
           ||||||||||||||||||||||
Sbjct: 683 caacatttttctactttgatat 704
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>gb|AC161119.3| Mus musculus BAC clone RP23-32J13 from chromosome 18, complete sequence
          Length = 218697

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 318    gtcttgtatttcttgagccct 338
              |||||||||||||||||||||
Sbjct: 174134 gtcttgtatttcttgagccct 174154
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>gb|AC113126.10| Mus musculus chromosome 6, clone RP23-352D5, complete sequence
          Length = 176364

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 380   ctttgggaggtgaaaagcaga 400
             |||||||||||||||||||||
Sbjct: 40233 ctttgggaggtgaaaagcaga 40253
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>emb|AL162373.16| Human DNA sequence from clone RP11-272M24 on chromosome 13 Contains a
             novel pseudogene, complete sequence
          Length = 176797

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 10    catttttctactttgatattt 30
             |||||||||||||||||||||
Sbjct: 37089 catttttctactttgatattt 37109
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>emb|AL158065.7| Human DNA sequence from clone RP11-64I8 on chromosome 13, complete
             sequence
          Length = 68301

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 466   ttgtcaatatctcaagaaagt 486
             |||||||||||||||||||||
Sbjct: 47821 ttgtcaatatctcaagaaagt 47801
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>emb|CR932040.2| Medicago truncatula chromosome 5 clone mth2-55h1, COMPLETE SEQUENCE
          Length = 122965

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 9     acatttttctactttgatatt 29
             |||||||||||||||||||||
Sbjct: 79242 acatttttctactttgatatt 79262
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>gb|AC109203.9| Mus musculus chromosome 18, clone RP23-2B18, complete sequence
          Length = 216783

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 318   gtcttgtatttcttgagccct 338
             |||||||||||||||||||||
Sbjct: 53047 gtcttgtatttcttgagccct 53067
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>emb|BX005265.6| Zebrafish DNA sequence from clone CH211-254O16 in linkage group 5,
              complete sequence
          Length = 162599

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 118    tgattaattaaccatgaccaa 138
              |||||||||||||||||||||
Sbjct: 146792 tgattaattaaccatgaccaa 146812
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>emb|AL929337.9| Zebrafish DNA sequence from clone CH211-138N21 in linkage group 5,
            complete sequence
          Length = 176736

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 118  tgattaattaaccatgaccaa 138
            |||||||||||||||||||||
Sbjct: 4955 tgattaattaaccatgaccaa 4935
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>gb|AC121870.2| Mus musculus chromosome 9 clone RP24-121D5, complete sequence
          Length = 191747

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 391   gaaaagcagaaatggacatcctct 414
             |||||||||||| |||||||||||
Sbjct: 51873 gaaaagcagaaaaggacatcctct 51850
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>ref|XM_637787.1| Dictyostelium discoideum hypothetical protein (DDB0217877), partial
            mRNA
          Length = 2187

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 12   tttttctactttgatattta 31
            ||||||||||||||||||||
Sbjct: 1516 tttttctactttgatattta 1497
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>gb|AC139129.10| Mus musculus chromosome 1, clone RP24-245K18, complete sequence
          Length = 152884

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     ccaacatttttctactttga 25
             ||||||||||||||||||||
Sbjct: 92435 ccaacatttttctactttga 92454
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>gb|AC159260.3| Mus musculus BAC clone RP24-85M18 from chromosome 3, complete sequence
          Length = 208348

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     atttttctactttgatattt 30
              ||||||||||||||||||||
Sbjct: 195564 atttttctactttgatattt 195545
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>gb|AC125192.3| Mus musculus BAC clone RP23-266B4 from chromosome 8, complete sequence
          Length = 199459

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 408   atcctctccttgtgaggatt 427
             ||||||||||||||||||||
Sbjct: 60425 atcctctccttgtgaggatt 60444
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>gb|AC162893.6| Mus musculus chromosome 7, clone RP23-419K14, complete sequence
          Length = 197052

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 298   caacctcgtccaccctcagg 317
             ||||||||||||||||||||
Sbjct: 62706 caacctcgtccaccctcagg 62687
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>gb|AC115581.3| Dictyostelium discoideum chromosome 2 map complement(3527391-3470188)
             strain AX4, complete sequence
          Length = 57203

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    tttttctactttgatattta 31
             ||||||||||||||||||||
Sbjct: 49750 tttttctactttgatattta 49769
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>gb|AC140841.2| Mus musculus BAC clone RP24-470M20 from chromosome 9, complete sequence
          Length = 163348

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 391   gaaaagcagaaatggacatcctct 414
             |||||||||||| |||||||||||
Sbjct: 16974 gaaaagcagaaaaggacatcctct 16997
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>gb|AC117186.3| Mus musculus BAC clone RP23-37O6 from 1, complete sequence
          Length = 172780

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 247   catagtccttggttttcttc 266
             ||||||||||||||||||||
Sbjct: 13262 catagtccttggttttcttc 13243
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>gb|AC004448.4| Homo sapiens chromosome 17, clone CTB-187M2, complete sequence
          Length = 149157

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 247   catagtccttggttttcttc 266
             ||||||||||||||||||||
Sbjct: 25809 catagtccttggttttcttc 25790
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>emb|AL360267.10| Human DNA sequence from clone RP11-342C20 on chromosome 13 Contains a
              RNA-binding protein LIN-28 pseudogene, a novel gene and the
              3' end of a novel gene, complete sequence
          Length = 157381

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 14     tttctactttgatatttatt 33
              ||||||||||||||||||||
Sbjct: 151763 tttctactttgatatttatt 151744
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>emb|BX119321.4| Human DNA sequence from clone RP5-908D6 on chromosome 1 Contains the 5'
             end of a novel pseudogene and a guanylate binding protein
             pseudogene, complete sequence
          Length = 68235

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 463   catttgtcaatatctcaaga 482
             ||||||||||||||||||||
Sbjct: 24415 catttgtcaatatctcaaga 24434
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>emb|AL450244.11| Human DNA sequence from clone RP11-152M20 on chromosome 1, complete
             sequence
          Length = 85101

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    tttctactttgatatttatt 33
             ||||||||||||||||||||
Sbjct: 49130 tttctactttgatatttatt 49111



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    tttctactttgatatttatt 33
             ||||||||||||||||||||
Sbjct: 47810 tttctactttgatatttatt 47791
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>gb|AC098689.2| Homo sapiens chromosome 1 clone RP11-56N17, complete sequence
          Length = 4001

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 434  gaccctgtgctcaatgcttt 453
            ||||||||||||||||||||
Sbjct: 1521 gaccctgtgctcaatgcttt 1540
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>emb|AL035698.12|HS69B13 Human DNA sequence from clone RP1-69B13 on chromosome 6q24.1-25.2
             Contains the 3' end of the GRM1 gene for metabotropic
             glutamate receptor 1, a phosphoribosyl pyrophosphate
             synthetase (PRPS1, PRPS2) pseudogene and a CpG island,
             complete sequence
          Length = 200317

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    tttctactttgatatttatt 33
             ||||||||||||||||||||
Sbjct: 66943 tttctactttgatatttatt 66962
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>emb|AL078459.8|HSA123M24 Human DNA sequence from clone RP4-621F18 on chromosome 1p11.4-21.3
             Contains part of a novel gene, and the 3' end of the DDAH1
             gene for dimethylarginine dimethylaminohydrolase 1,
             complete sequence
          Length = 83946

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 434   gaccctgtgctcaatgcttt 453
             ||||||||||||||||||||
Sbjct: 83246 gaccctgtgctcaatgcttt 83265
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>emb|AL034557.8|PFMAL4P1 Plasmodium falciparum MAL4P1
          Length = 347582

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 12     tttttctactttgatattta 31
              ||||||||||||||||||||
Sbjct: 278153 tttttctactttgatattta 278172
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>emb|AL023777.1|SPCC1827 S.pombe chromosome III cosmid c1827
          Length = 17600

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 446  aatgctttggtactttccatttgtcaat 473
            ||||||| | ||||||||||||||||||
Sbjct: 8069 aatgcttcgatactttccatttgtcaat 8096
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>gb|AC116303.6| Homo sapiens 3 BAC RP11-276B15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 51070

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 393   aaagcagaaatggacatcct 412
             ||||||||||||||||||||
Sbjct: 47368 aaagcagaaatggacatcct 47349
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>emb|CR759946.5| Zebrafish DNA sequence from clone DKEY-79C1 in linkage group 5,
             complete sequence
          Length = 60636

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    ttttctactttgatatttat 32
             ||||||||||||||||||||
Sbjct: 52912 ttttctactttgatatttat 52931
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>ref|NM_205459.1| Gallus gallus myosin, light polypeptide kinase (MYLK), mRNA
          Length = 7639

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 397 cagaaatggacatcctctcc 416
           ||||||||||||||||||||
Sbjct: 194 cagaaatggacatcctctcc 213
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>emb|X52876.1|GGFMYLCK G.gallus mRNA for fibroblast myosin light chain kinase
          Length = 7631

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 397 cagaaatggacatcctctcc 416
           ||||||||||||||||||||
Sbjct: 186 cagaaatggacatcctctcc 205
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>gb|AC025627.13| Homo sapiens chromosome 17, clone RP11-1113L8, complete sequence
          Length = 149866

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 247   catagtccttggttttcttc 266
             ||||||||||||||||||||
Sbjct: 20254 catagtccttggttttcttc 20273
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>ref|NM_080169.2| Drosophila melanogaster Ecdysone-inducible gene E3 CG2723-RA (ImpE3),
            mRNA
          Length = 2236

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 25   atatttattcgagcacatttttta 48
            ||||||||| ||||||||||||||
Sbjct: 2082 atatttatttgagcacatttttta 2105
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>gb|AC021733.12| Homo sapiens chromosome 8, clone RP11-775B15, complete sequence
          Length = 158341

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 454   ggtactttccatttgtcaatatct 477
             ||||| ||||||||||||||||||
Sbjct: 32902 ggtacattccatttgtcaatatct 32925
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>gb|AC090451.6| Homo sapiens chromosome 8, clone RP11-318N11, complete sequence
          Length = 160671

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 454    ggtactttccatttgtcaatatct 477
              ||||| ||||||||||||||||||
Sbjct: 144709 ggtacattccatttgtcaatatct 144732
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>gb|AY061140.1| Drosophila melanogaster LD11958 full length cDNA
          Length = 2254

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 25   atatttattcgagcacatttttta 48
            ||||||||| ||||||||||||||
Sbjct: 2082 atatttatttgagcacatttttta 2105
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>emb|BX950237.2| Gallus gallus finished cDNA, clone ChEST704b4
          Length = 771

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 397 cagaaatggacatcctctcc 416
           ||||||||||||||||||||
Sbjct: 219 cagaaatggacatcctctcc 238
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>emb|BX088654.11| Zebrafish DNA sequence from clone CH211-195H6 in linkage group 15,
              complete sequence
          Length = 205794

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 119    gattaattaaccatgaccaa 138
              ||||||||||||||||||||
Sbjct: 177389 gattaattaaccatgaccaa 177408
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>ref|NM_069973.2| Caenorhabditis elegans F08G5.6 (F08G5.6) mRNA, complete cds
          Length = 1056

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 399 gaaatggacatcctctcctt 418
           ||||||||||||||||||||
Sbjct: 536 gaaatggacatcctctcctt 517
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>gb|AC008093.4|AC008093 Drosophila melanogaster, chromosome 3R, region 84F-84F, BAC clone
             BACR07M14, complete sequence
          Length = 181950

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 25    atatttattcgagcacatttttta 48
             ||||||||| ||||||||||||||
Sbjct: 79055 atatttatttgagcacatttttta 79032
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>gb|AC083906.23| Homo sapiens 3 BAC RP11-93K22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 167875

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 386    gaggtgaaaagcagaaatgg 405
              ||||||||||||||||||||
Sbjct: 162600 gaggtgaaaagcagaaatgg 162619
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>emb|AL593846.15| Mouse DNA sequence from clone RP23-171H16 on chromosome 11, complete
              sequence
          Length = 213263

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 392    aaaagcagaaatggacatcctctccttg 419
              |||||||||| ||| |||||||||||||
Sbjct: 206554 aaaagcagaattgggcatcctctccttg 206527
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>emb|BX510916.7| Zebrafish DNA sequence from clone DKEY-208B17 in linkage group 5,
            complete sequence
          Length = 174866

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 13   ttttctactttgatatttat 32
            ||||||||||||||||||||
Sbjct: 9258 ttttctactttgatatttat 9277
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>emb|BX000987.6| Zebrafish DNA sequence from clone CH211-130P10 in linkage group 15,
              complete sequence
          Length = 152072

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    gattaattaaccatgaccaa 138
              ||||||||||||||||||||
Sbjct: 103289 gattaattaaccatgaccaa 103270
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>emb|BX005217.5| Zebrafish DNA sequence from clone CH211-87L3 in linkage group 15,
             complete sequence
          Length = 154452

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   gattaattaaccatgaccaa 138
             ||||||||||||||||||||
Sbjct: 82719 gattaattaaccatgaccaa 82700
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>emb|Z22872.1|GMLEAPROA G.max Lea protein mRNA, complete CDS
          Length = 1748

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 245 ggcatagtccttggttttct 264
           ||||||||||||||||||||
Sbjct: 491 ggcatagtccttggttttct 472



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 245 ggcatagtccttggttttct 264
           ||||||||||||||||||||
Sbjct: 458 ggcatagtccttggttttct 439
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>gb|AE003677.3| Drosophila melanogaster chromosome 3R, section 15 of 118 of the
             complete sequence
          Length = 228314

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 25    atatttattcgagcacatttttta 48
             ||||||||| ||||||||||||||
Sbjct: 57450 atatttatttgagcacatttttta 57427
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>gb|AC122516.4| Mus musculus BAC clone RP24-458M4 from chromosome 3, complete sequence
          Length = 162419

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 11     atttttctactttgatattt 30
              ||||||||||||||||||||
Sbjct: 159651 atttttctactttgatattt 159670
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>dbj|AP000795.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-876F8, complete
             sequence
          Length = 76999

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 394   aagcagaaatggacatcctc 413
             ||||||||||||||||||||
Sbjct: 44012 aagcagaaatggacatcctc 43993
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>emb|AL929516.15| Zebrafish DNA sequence from clone CH211-10C20 in linkage group 1,
             complete sequence
          Length = 165892

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   gattaattaaccatgaccaa 138
             ||||||||||||||||||||
Sbjct: 89624 gattaattaaccatgaccaa 89643
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>gb|AF045256.1|GGMLCK02 Gallus gallus smooth muscle/non-muscle myosin light chain kinase
           gene, exon 2
          Length = 276

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 397 cagaaatggacatcctctcc 416
           ||||||||||||||||||||
Sbjct: 70  cagaaatggacatcctctcc 89
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>gb|AC140214.3| Mus musculus BAC clone RP23-479G14 from 1, complete sequence
          Length = 194229

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 247   catagtccttggttttcttc 266
             ||||||||||||||||||||
Sbjct: 83424 catagtccttggttttcttc 83405
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>gb|AC145565.4| Mus musculus BAC clone RP24-485M14 from 3, complete sequence
          Length = 184423

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 11     atttttctactttgatattt 30
              ||||||||||||||||||||
Sbjct: 117776 atttttctactttgatattt 117795
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>emb|AL672298.4| Mouse DNA sequence from clone RP23-456D8 on chromosome X, complete
             sequence
          Length = 204050

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   aatttctgctccaagctttt 217
             ||||||||||||||||||||
Sbjct: 12657 aatttctgctccaagctttt 12638
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>emb|AL772292.10| Mouse DNA sequence from clone RP23-109C16 on chromosome 2, complete
             sequence
          Length = 201671

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 379   actttgggaggtgaaaagcagaaa 402
             |||||||| |||||||||||||||
Sbjct: 22945 actttgggtggtgaaaagcagaaa 22922
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>emb|AL355818.13| Human DNA sequence from clone RP4-667C9 on chromosome 1, complete
             sequence
          Length = 101854

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 463   catttgtcaatatctcaaga 482
             ||||||||||||||||||||
Sbjct: 85550 catttgtcaatatctcaaga 85531


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,162,275
Number of Sequences: 3902068
Number of extensions: 6162275
Number of successful extensions: 95014
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94897
Number of HSP's gapped (non-prelim): 117
length of query: 500
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 478
effective length of database: 17,147,199,772
effective search space: 8196361491016
effective search space used: 8196361491016
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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