ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart55b10 |
|---|---|
| Clone Library Name | barley_pub |
>PYRD_GLOVI (Q7NC99) Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate| oxidase) (DHOdehase) (DHODase) (DHOD) Length = 353 Score = 34.3 bits (77), Expect = 0.19 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 5/66 (7%) Frame = -1 Query: 415 LVADVDKASEAEGEWEMVATGDGDVSTVEEDPTPPKPRQ---QEPAEEE--EKKTVSTDG 251 L A DK +EA G WE + G +V TV P PR + PA++ + + DG Sbjct: 65 LAAGFDKNAEAVGAWEHLGFGFAEVGTVTRHAQPGNPRPRLFRLPADQAAINRMGFNNDG 124 Query: 250 LDARKL 233 DA L Sbjct: 125 ADALAL 130
>CY1_PARDE (P13627) Cytochrome c1 precursor| Length = 450 Score = 33.9 bits (76), Expect = 0.24 Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 6/107 (5%) Frame = -1 Query: 493 ATETAAMEVDVASPVVLDKAVQTET---ELVADVDKASEAEGEWEMVATGDGDVSTVE-- 329 A E AA E + V ++ TET E AD A+E A + +T E Sbjct: 60 ADEPAAEEAEAGEAEVTEEPAATETPAEEPAADEPAATEEPDAEAEPAAEEAQATTEEAP 119 Query: 328 -EDPTPPKPRQQEPAEEEEKKTVSTDGLDARKLMEMVAALCERSAQQ 191 E+P +P +EPAEE + + E AA E +A++ Sbjct: 120 AEEPAAEEPAAEEPAEEPAADAPAEEAAAEEAPAEPEAAAEEPAAEE 166
>TAF11_RAT (Q5U1X0) Transcription initiation factor TFIID subunit 11| (Transcription initiation factor TFIID 28 kDa subunit) (TAF(II)28) (TAFII-28) (TAFII28) (TFIID subunit p30-beta) Length = 211 Score = 32.7 bits (73), Expect = 0.54 Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 5/89 (5%) Frame = -1 Query: 457 SPVVLD-KAVQTETELVADVDKASEAEGEWEMVATGDGDVSTVE-EDP---TPPKPRQQE 293 +PV D + + ET+ V D D A E E+ + DV+ E EDP TP + + Sbjct: 27 APVSADTEGIPEETDQVGDADSKEAAAEESELKSQDVSDVTAAEREDPSLLTPAAKKLKL 86 Query: 292 PAEEEEKKTVSTDGLDARKLMEMVAALCE 206 +++++K D + +K+ +V++ E Sbjct: 87 DTKDKKEKKQKVDEDEIQKMQILVSSFSE 115
>MOF_DROME (O02193) Males-absent on the first protein (EC 2.3.1.-) (Putative| acetyl transferase MOF) Length = 827 Score = 32.3 bits (72), Expect = 0.71 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = -1 Query: 346 DVSTVEEDPTPPKPRQQEPAEEEEKKTVSTDGLDARKLMEMVA 218 DVS EE P P+P Q + ++EEKK D + + +E+ A Sbjct: 120 DVSEAEEAPPEPEPEQPQQQQQEEKKEDGQDQVKSPGPVELEA 162
>RIMS2_HUMAN (Q9UQ26) Regulating synaptic membrane exocytosis protein 2| (Rab3-interacting molecule 2) (RIM 2) Length = 1411 Score = 32.0 bits (71), Expect = 0.93 Identities = 20/43 (46%), Positives = 25/43 (58%) Frame = +2 Query: 131 PPDRALQRVHPLRQGSDQSALLRAPLAQRRHHLHQLPRVQPVG 259 PP AL R HP R GS Q++ P+A RR QLP++ P G Sbjct: 1130 PPSPALSRSHP-RTGSVQTSPSSTPVAGRRG--RQLPQLPPKG 1169
>ABTAP_RAT (Q76MT4) ABT1-associated protein| Length = 842 Score = 32.0 bits (71), Expect = 0.93 Identities = 20/83 (24%), Positives = 42/83 (50%), Gaps = 2/83 (2%) Frame = -1 Query: 487 ETAAMEVDVASPVVLDKAVQTETELVADVDKASEAEGEW--EMVATGDGDVSTVEEDPTP 314 + M D A ++ ++A + +++ +++ + E+EGE + A+ D D + EE+ Sbjct: 211 QAVIMAKDNAGRMLHEEAPEEDSDSASELGRDEESEGEITSDDRASADDDENEDEEEEED 270 Query: 313 PKPRQQEPAEEEEKKTVSTDGLD 245 + ++E EE+E S G D Sbjct: 271 GEEEEEEEEEEDESDDESDSGPD 293
>CAP3_ARATH (Q8GX47) Putative clathrin assembly protein At4g02650| Length = 611 Score = 32.0 bits (71), Expect = 0.93 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 3/76 (3%) Frame = -1 Query: 472 EVDVASPVVLDK---AVQTETELVADVDKASEAEGEWEMVATGDGDVSTVEEDPTPPKPR 302 ++D+ + DK A QT +K+ E E + E + D+++++ P P Sbjct: 319 KLDLMDEFIRDKSALAAQTTKSSSKRSNKSEEEESKTEYIQENQEDLNSIK---ALPAPE 375 Query: 301 QQEPAEEEEKKTVSTD 254 Q+E EEEEK D Sbjct: 376 QKEEEEEEEKMETKKD 391
>ABTAP_HUMAN (Q9H501) ABT1-associated protein| Length = 851 Score = 31.2 bits (69), Expect = 1.6 Identities = 16/64 (25%), Positives = 30/64 (46%) Frame = -1 Query: 436 AVQTETELVADVDKASEAEGEWEMVATGDGDVSTVEEDPTPPKPRQQEPAEEEEKKTVST 257 A++ ++E V+++ E+E E V GD E+D + +++ E+ E S Sbjct: 238 ALEEDSESVSEIGSDEESENEITSVGRASGDDDGSEDDEEEDEDEEEDEDEDSEDDDKSD 297 Query: 256 DGLD 245 G D Sbjct: 298 SGPD 301
>TAF11_HUMAN (Q15544) Transcription initiation factor TFIID subunit 11| (Transcription initiation factor TFIID 28 kDa subunit) (TAF(II)28) (TAFII-28) (TAFII28) (TFIID subunit p30-beta) Length = 211 Score = 31.2 bits (69), Expect = 1.6 Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 5/99 (5%) Frame = -1 Query: 487 ETAAMEVDVASPVVLDK-AVQTETELVADVDKASEAEGEWEMVATGDGDVSTVEEDPT-- 317 ETAA+ D P D + ET+ ADVD A E E+ + D++TVE + + Sbjct: 20 ETAAVPGD---PGATDTDGIPEETDGDADVDLKEAAAEEGELESQDVSDLTTVEREDSSL 76 Query: 316 --PPKPRQQEPAEEEEKKTVSTDGLDARKLMEMVAALCE 206 P + + +E+++K D + +K+ +V++ E Sbjct: 77 LNPAAKKLKIDTKEKKEKKQKVDEDEIQKMQILVSSFSE 115
>SLK_CAVPO (O55092) STE20-like serine/threonine-protein kinase (EC 2.7.11.1)| (STE20-like kinase) (STE20-related serine/threonine-protein kinase) (STE20-related kinase) Length = 1231 Score = 30.8 bits (68), Expect = 2.1 Identities = 20/64 (31%), Positives = 32/64 (50%) Frame = -1 Query: 445 LDKAVQTETELVADVDKASEAEGEWEMVATGDGDVSTVEEDPTPPKPRQQEPAEEEEKKT 266 LD+ TE + +AD++ S EGE + T + + +E + P K R QE E K Sbjct: 423 LDRLPDTEDQEMADINSVS--EGEEDHAVTSE---TNIEHNLKPEKERDQEKQPVLENKL 477 Query: 265 VSTD 254 V ++ Sbjct: 478 VKSE 481
>SOX12_HUMAN (O15370) SOX-12 protein (SOX-22 protein)| Length = 315 Score = 30.8 bits (68), Expect = 2.1 Identities = 17/50 (34%), Positives = 26/50 (52%) Frame = -1 Query: 400 DKASEAEGEWEMVATGDGDVSTVEEDPTPPKPRQQEPAEEEEKKTVSTDG 251 DK S A+G +G+G + PTP + +EP EEEE+ + +G Sbjct: 198 DKRSRAQGP-----SGEGAAAAAAASPTPSE--DEEPEEEEEEAAAAEEG 240
>DBP6_YARLI (Q6CDN5) ATP-dependent RNA helicase DBP6 (EC 3.6.1.-)| Length = 607 Score = 30.4 bits (67), Expect = 2.7 Identities = 25/90 (27%), Positives = 41/90 (45%) Frame = -1 Query: 460 ASPVVLDKAVQTETELVADVDKASEAEGEWEMVATGDGDVSTVEEDPTPPKPRQQEPAEE 281 ASPV K E E + + +E E+E +GD + EE KP + + EE Sbjct: 16 ASPVPFKKVKHEEEESKPETNADEHSEVEYEE-ESGDDSMDEAEE---AKKPVEVKDEEE 71 Query: 280 EEKKTVSTDGLDARKLMEMVAALCERSAQQ 191 E + ++ D RK + A L +R+ ++ Sbjct: 72 SEDENLTAD--QKRKKKQEAANLAKRAEEK 99
>VP91_NPVCF (Q7TLR9) Capsid-associated protein Vp91 precursor| Length = 833 Score = 30.4 bits (67), Expect = 2.7 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = -1 Query: 385 AEGEWEMVATGDGDVSTVEEDPTPPKPRQQEPAEEE 278 A+G W GDGD E PT P+P + +E E Sbjct: 640 ADGVWRSEPGGDGDHWAPEVPPTQPEPELEPESETE 675
>RIMS2_RAT (Q9JIS1) Regulating synaptic membrane exocytosis protein 2| (Rab3-interacting molecule 2) (RIM 2) Length = 1555 Score = 30.4 bits (67), Expect = 2.7 Identities = 19/43 (44%), Positives = 24/43 (55%) Frame = +2 Query: 131 PPDRALQRVHPLRQGSDQSALLRAPLAQRRHHLHQLPRVQPVG 259 PP AL R HP R GS Q++ P+ RR QLP++ P G Sbjct: 1088 PPSPALSRSHP-RTGSVQTSPSSTPVTGRRG--RQLPQLPPKG 1127
>GAK_RAT (P97874) Cyclin G-associated kinase (EC 2.7.11.1)| Length = 1305 Score = 30.4 bits (67), Expect = 2.7 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%) Frame = -1 Query: 430 QTETELVADVDKASEAEGEWEMVATGDG-DVSTVEEDPTPPKPRQQEPAEEEEKKTVSTD 254 Q E + VD S E + ++A GDG +VS EE P + R+ E+ + T Sbjct: 796 QEEKDPETGVDNTSPKESQSNLIADGDGSEVSDEEEASCPSEERKPGAGEDTPRLAAGTR 855 Query: 253 GLDARKLMEMVAA 215 D + M+AA Sbjct: 856 QQDLIFDVGMLAA 868
>NFM_CHICK (P16053) Neurofilament triplet M protein (160 kDa neurofilament| protein) (Neurofilament medium polypeptide) (NF-M) Length = 857 Score = 30.4 bits (67), Expect = 2.7 Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 7/85 (8%) Frame = -1 Query: 460 ASPVVLDKAVQTE-------TELVADVDKASEAEGEWEMVATGDGDVSTVEEDPTPPKPR 302 +SP+ +KAV E T++ A+V+ + EA E ++ G+ VEE K Sbjct: 716 SSPLKDEKAVVEESITVTKVTKVTAEVEVSKEARKE-DIAVNGE-----VEEK----KDE 765 Query: 301 QQEPAEEEEKKTVSTDGLDARKLME 227 +E EEE+K V T+GLD + E Sbjct: 766 AKEKEAEEEEKGVVTNGLDVSPVDE 790
>RP3A_HUMAN (Q9Y2J0) Rabphilin-3A (Exophilin-1)| Length = 694 Score = 30.0 bits (66), Expect = 3.5 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Frame = -1 Query: 322 PTPPKPRQQEPAEEEEKKTVSTDGLDARKLMEMVAALC---ERSAQQCALIGA 173 P P RQ P EEEE++ S D +A L + +L + S+ QC +I A Sbjct: 364 PQPAAARQPPPPEEEEEEANSYDSDEATTLGALEFSLLYDQDNSSLQCTIIKA 416
>CCD96_HUMAN (Q2M329) Coiled-coil domain-containing protein 96| Length = 555 Score = 30.0 bits (66), Expect = 3.5 Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 2/63 (3%) Frame = -1 Query: 379 GEWEMVATGDGDVSTVEEDPTPPKP--RQQEPAEEEEKKTVSTDGLDARKLMEMVAALCE 206 G+ E +A + PT P+P + EP EEEE++ S G A + E L Sbjct: 16 GDGESLAARPSKIKASSGPPTSPEPGELESEPEEEEEEQAASQGGTAADEQAEAPKGLTA 75 Query: 205 RSA 197 A Sbjct: 76 AEA 78
>HSP7F_YEAST (P32589) Heat shock protein homolog SSE1 (Chaperone protein MSI3)| Length = 692 Score = 30.0 bits (66), Expect = 3.5 Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 12/72 (16%) Frame = -1 Query: 328 EDPTPPKPRQQEPAEEEEK---KTVSTD---------GLDARKLMEMVAALCERSAQQCA 185 E+P P E AE+E K KTV D GLDA+KL E++ E AQ Sbjct: 503 EEPIPLPEDAPEDAEQEFKKVTKTVKKDDLTIVAHTFGLDAKKLNELIEKENEMLAQD-K 561 Query: 184 LIGALAERVDTL 149 L+ +R +TL Sbjct: 562 LVAETEDRKNTL 573
>SSRP1_CATRO (Q39601) Structure-specific recognition protein 1 homolog (HMG| protein) Length = 639 Score = 30.0 bits (66), Expect = 3.5 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Frame = -1 Query: 442 DKAVQTETELVADVD---KASEAEGEWEMVATGDGDVSTVEEDPTPPKPRQQEPAEE--- 281 D++ + + + VAD+D ++ GE E DG S EE PT KP+++ A + Sbjct: 476 DESDEEDEDFVADIDDEGSPTDDSGEGE----SDGSDSGNEEIPTKKKPKKEASAPKVPL 531 Query: 280 EEKKTVSTDGLDARK 236 KK D + +K Sbjct: 532 SRKKVGDDDNMKKKK 546
>ABTAP_MOUSE (Q3V1V3) ABT1-associated protein| Length = 845 Score = 30.0 bits (66), Expect = 3.5 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 6/81 (7%) Frame = -1 Query: 493 ATETAAMEVDVASPVVL----DKAVQTETELVADVDKASE--AEGEWEMVATGDGDVSTV 332 ++ A E PV++ D + E L D D ASE ++ E E DG S Sbjct: 204 SSSKAKREKQSVVPVIMAKDNDGKMPDEDALEEDSDSASELGSDEESEDEIISDGKTSAD 263 Query: 331 EEDPTPPKPRQQEPAEEEEKK 269 E++ ++E +EEEE++ Sbjct: 264 EDESEEEDEEEEEDSEEEEEE 284
>LAP4_DROME (Q7KRY7) Protein lap4 (Protein scribble) (Protein smell-impaired)| Length = 1851 Score = 30.0 bits (66), Expect = 3.5 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = -1 Query: 409 ADVDKASEAEGEWEMVATGDGDVSTVEEDPTPP 311 ADV KA+ + E++ GD T++ DP PP Sbjct: 1300 ADVSKATHQDAVLELLKPGDEIKLTIQHDPLPP 1332
>SCNA_ELEEL (P02719) Sodium channel protein (Na(+) channel)| Length = 1820 Score = 29.6 bits (65), Expect = 4.6 Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 5/78 (6%) Frame = -1 Query: 463 VASPVVLDKAVQTETELVAD--VDKASEAEGEWEMVATGDGD---VSTVEEDPTPPKPRQ 299 V SP + V+ E+E+ + VD + E + + A D D STV+ P+ P Sbjct: 881 VESPTLNLPIVKGESEIEEEGLVDSSDEEDTNKKKHALNDEDSSVCSTVDYSPSEQDPLA 940 Query: 298 QEPAEEEEKKTVSTDGLD 245 +E EEEE++ + D Sbjct: 941 KEEEEEEEEEPEELESKD 958
>BASP_BOVIN (P80724) Brain acid soluble protein 1 (BASP1 protein) (Neuronal| axonal membrane protein NAP-22) (22 kDa neuronal tissue-enriched acidic protein) Length = 226 Score = 29.6 bits (65), Expect = 4.6 Identities = 25/72 (34%), Positives = 30/72 (41%), Gaps = 8/72 (11%) Frame = -1 Query: 406 DVDKASEAEGEWEMVATGDGDVSTVEEDPT--------PPKPRQQEPAEEEEKKTVSTDG 251 D K + EGE + A + D E +PT PPK +QEPA T G Sbjct: 64 DTTKPEDKEGEKDAEAAKE-DAPKAEPEPTEGAEGKPEPPKDAEQEPAAASGPST----G 118 Query: 250 LDARKLMEMVAA 215 DA K E AA Sbjct: 119 GDAPKASEAEAA 130
>ZEST_DROME (P09956) Regulatory protein zeste| Length = 574 Score = 29.6 bits (65), Expect = 4.6 Identities = 21/101 (20%), Positives = 45/101 (44%), Gaps = 6/101 (5%) Frame = -1 Query: 433 VQTETELVADVDKASEAEGEWEMVATGDGDVSTVEEDPTPPKPRQQE------PAEEEEK 272 V+ E ++ D + + ++ + DVS ++EDP + +QQ+ A+ + + Sbjct: 172 VEPEYQISPDASEHNPQADTFDEIEMDANDVSEIDEDPMEQQQQQQQEAQAQAQAQAQAQ 231 Query: 271 KTVSTDGLDARKLMEMVAALCERSAQQCALIGALAERVDTL 149 V + + +K M+ V A+ +A +I VD + Sbjct: 232 AQVQSAAAEMQK-MQQVNAVAAAAAANATMINTHQINVDQI 271
>SYTL1_MOUSE (Q99N80) Synaptotagmin-like protein 1 (Exophilin-7)| Length = 567 Score = 29.6 bits (65), Expect = 4.6 Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 6/81 (7%) Frame = -1 Query: 466 DVASPVVLDKAVQTETELVADVDKASEAEGEWEMVATGDGDVSTVEEDP--TPPKPRQQE 293 D++SP V KA + + E D E E+ A G+G V E DP P + +QE Sbjct: 157 DLSSPYVPSKASEGQEEEPQD--------HECELEAPGEGGVQVAEADPELDPEQKAEQE 208 Query: 292 ----PAEEEEKKTVSTDGLDA 242 PA+ + + +G +A Sbjct: 209 SQPTPAQSKATSKILENGEEA 229
>TCF8_RAT (Q62947) Transcription factor 8 (Zinc finger homeodomain| enhancer-binding protein) (Zfhep) Length = 1109 Score = 29.6 bits (65), Expect = 4.6 Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 16/91 (17%) Frame = -1 Query: 493 ATETAAMEVDVASPVVLDKAVQTET----------------ELVADVDKASEAEGEWEMV 362 A + AME + P L + + TE L + D+ SE E E E Sbjct: 967 AEDRDAMEQEDTGPEALPEVLPTELVGARASPSQADSDERESLTREEDEDSEKEEEEE-- 1024 Query: 361 ATGDGDVSTVEEDPTPPKPRQQEPAEEEEKK 269 D ++ ++ED P+++E EEEE++ Sbjct: 1025 ---DKEMEELQEDKECENPQEEEEEEEEEEE 1052
>PALM_HUMAN (O75781) Paralemmin| Length = 387 Score = 29.6 bits (65), Expect = 4.6 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%) Frame = -1 Query: 400 DKASEAEGEWEMVATGDGDVSTVEED---PTPPKPRQQEPAEEEEKKTV 263 D S E E E++ GD +T +E+ P+P + PA+EE K V Sbjct: 86 DSVSRLEKEIEVLERGDSAPATAKENAAAPSPVRAPAPSPAKEERKTEV 134
>IF2_LACLA (P58002) Translation initiation factor IF-2| Length = 944 Score = 29.6 bits (65), Expect = 4.6 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%) Frame = -1 Query: 478 AMEVDVAS---PVVLDKAVQTETELVADVDKASEAEGEWEMVATGDGDVSTVEEDPTPPK 308 A +V+VAS PVV +K +E A+ +++E + E V T D ++ E Sbjct: 112 AAKVEVASTEHPVVTEKPKASEPVKKAEPKVEAKSEPKVEKVETKDNTATSKAEVKPENV 171 Query: 307 PRQQEPAEEEEKK 269 ++EP EEKK Sbjct: 172 ADKKEPVVTEEKK 184
>YCF1_TOBAC (P12222) Hypothetical 226 kDa protein ycf1 (ORF 1901)| Length = 1901 Score = 29.6 bits (65), Expect = 4.6 Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 7/83 (8%) Frame = -1 Query: 463 VASPVV---LDKAVQTETELVADVDKASEAEGEWEMVATGDGDVSTVEEDPTPP----KP 305 + SP++ L +A +TE + ++ ++ E E EM T + EEDP P Sbjct: 237 IPSPILTKKLKEASKTEERVESEEERDVEIETASEMKGTKQEQEGSTEEDPYPSPSLFSE 296 Query: 304 RQQEPAEEEEKKTVSTDGLDARK 236 + +P + +E + + +G D K Sbjct: 297 ERWDPDKIDETEEIRVNGKDKIK 319
>RPGR1_MOUSE (Q9EPQ2) X-linked retinitis pigmentosa GTPase regulator-interacting| protein 1 (RPGR-interacting protein 1) Length = 1331 Score = 29.6 bits (65), Expect = 4.6 Identities = 22/84 (26%), Positives = 37/84 (44%) Frame = -1 Query: 472 EVDVASPVVLDKAVQTETELVADVDKASEAEGEWEMVATGDGDVSTVEEDPTPPKPRQQE 293 E +V V ++ + E E +K E E E E + + EE+ + ++E Sbjct: 918 EEEVKEEEVEEEEEEEEEEEEVKEEKEEEEEEEREEEEEKEEEKEEEEEEDEKEEEEEEE 977 Query: 292 PAEEEEKKTVSTDGLDARKLMEMV 221 EEEE++ + D L+A E V Sbjct: 978 EEEEEEEEDENKDVLEASFTEEWV 1001
>FA40B_HUMAN (Q9ULQ0) Protein FAM40B| Length = 834 Score = 29.3 bits (64), Expect = 6.0 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Frame = -1 Query: 433 VQTETELVADVDKASEAEGE--WEMVATGDGDVSTVEEDPTPPKPRQQEPAEEE 278 + E +L + A+E E E + T DG++ +E+DP P P Q P E Sbjct: 357 IYNERDLFKTEEPATEEEEESAGDGERTLDGELDLLEQDPLVPPPPSQAPLSAE 410
>RESA_PLAFN (P13831) Ring-infected erythrocyte surface antigen (Fragment)| Length = 760 Score = 29.3 bits (64), Expect = 6.0 Identities = 18/63 (28%), Positives = 31/63 (49%) Frame = -1 Query: 439 KAVQTETELVADVDKASEAEGEWEMVATGDGDVSTVEEDPTPPKPRQQEPAEEEEKKTVS 260 KA + E + A K ++ W + G GD+ TVE P+Q+EP + +++ V+ Sbjct: 106 KAAEAEMKKRAQKPKKKKSRRGW--LCCGGGDIETVE-------PQQEEPVQTVQEQQVN 156 Query: 259 TDG 251 G Sbjct: 157 EYG 159
>SYSC_YEAST (P07284) Seryl-tRNA synthetase, cytoplasmic (EC 6.1.1.11)| (Serine--tRNA ligase) (SerRS) Length = 462 Score = 29.3 bits (64), Expect = 6.0 Identities = 15/64 (23%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Frame = -1 Query: 469 VDVASPVVLDKAVQTETELVADVD----KASEAEGEWEMVATGDGDVSTVEEDPTPPKPR 302 + + +PV+++K + ++T +++ D K + E E ++AT + +S KP+ Sbjct: 205 IPLQAPVMMNKELMSKTAQLSEFDEELYKVIDGEDEKYLIATSEQPISAYHSGEWFEKPQ 264 Query: 301 QQEP 290 +Q P Sbjct: 265 EQLP 268
>DIDO1_MOUSE (Q8C9B9) Death-inducer obliterator 1 (DIO-1) (Death-associated| transcription factor 1) (DATF-1) (Fragments) Length = 1956 Score = 29.3 bits (64), Expect = 6.0 Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 1/95 (1%) Frame = -1 Query: 454 PVVLDKAVQTETELVADVDKASEAEGEWEM-VATGDGDVSTVEEDPTPPKPRQQEPAEEE 278 PV L+ + + + V DV+ ASE E + +G S +E P + + + EEE Sbjct: 88 PVSLEDSSEPTSSTVTDVETASEGSVESSSEIRSGPVSDSLGKEHPASSE-KAKGGEEEE 146 Query: 277 EKKTVSTDGLDARKLMEMVAALCERSAQQCALIGA 173 + +DGL ++L + E+ + +L G+ Sbjct: 147 DTSDSDSDGLTLKELQNRLRRKREQEPVERSLRGS 181
>RESA_PLAFF (P13830) Ring-infected erythrocyte surface antigen precursor| Length = 1073 Score = 29.3 bits (64), Expect = 6.0 Identities = 18/63 (28%), Positives = 31/63 (49%) Frame = -1 Query: 439 KAVQTETELVADVDKASEAEGEWEMVATGDGDVSTVEEDPTPPKPRQQEPAEEEEKKTVS 260 KA + E + A K ++ W + G GD+ TVE P+Q+EP + +++ V+ Sbjct: 320 KAAEAEMKKRAQKPKKKKSRRGW--LCCGGGDIETVE-------PQQEEPVQTVQEQQVN 370 Query: 259 TDG 251 G Sbjct: 371 EYG 373
>NOC3L_DROME (Q9VI82) Nucleolar complex protein 3 homolog (NOC3 protein homolog)| (NOC3-like protein) (Nucleolar complex-associated protein 3-like protein) Length = 822 Score = 29.3 bits (64), Expect = 6.0 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 1/82 (1%) Frame = -1 Query: 493 ATETAAMEVDVASPVVLDKAVQTETELVADVDKASEAEGEWEMVATGDGDVST-VEEDPT 317 A T + D + L++A ++T+ D K + + + DG + T E Sbjct: 113 AKTTGENDPDQGQSIGLERAYASDTKKEQDAQKIKL---DLLPIKSRDGQIITRTTEVDY 169 Query: 316 PPKPRQQEPAEEEEKKTVSTDG 251 PKP+Q++ EEEE+ DG Sbjct: 170 IPKPKQKKKNEEEEEDDSEEDG 191
>DAXX_RAT (Q8VIB2) Death domain-associated protein 6 (Daxx)| Length = 731 Score = 29.3 bits (64), Expect = 6.0 Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 12/77 (15%) Frame = -1 Query: 421 TELVADVDKASEAEGEWEMVATGDGDVSTVEEDPTPPKPR------------QQEPAEEE 278 T +D+ KAS GE G V++ +EDPT PK ++E EEE Sbjct: 399 TSQSSDLPKASSDSGE------GPSGVAS-QEDPTTPKAETEDEEDDEESDDEEEEEEEE 451 Query: 277 EKKTVSTDGLDARKLME 227 E++ + D +L E Sbjct: 452 EEEATEDEDEDLEQLQE 468
>TAF11_PONPY (Q5RA91) Transcription initiation factor TFIID subunit 11| (Transcription initiation factor TFIID 28 kDa subunit) (TAF(II)28) (TAFII-28) (TAFII28) (TFIID subunit p30-beta) Length = 211 Score = 29.3 bits (64), Expect = 6.0 Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 5/99 (5%) Frame = -1 Query: 487 ETAAMEVDVASPVVLDK-AVQTETELVADVDKASEAEGEWEMVATGDGDVSTVEEDP--- 320 ETAA D P D + +T+ AD D A E E+ + D++TVE + Sbjct: 20 ETAAAPGD---PGATDTDGIPEDTDGDADADLKEAAAEEGELKSQDISDLTTVEREDSSL 76 Query: 319 -TPPKPRQQEPAEEEEKKTVSTDGLDARKLMEMVAALCE 206 TP + + +E+++K D + +K+ +V++ E Sbjct: 77 LTPAAKKLKIDTKEKKEKKQKVDEDEIQKMQILVSSFSE 115
>SET1A_HUMAN (O15047) Histone-lysine N-methyltransferase, H3 lysine-4 specific| SET1 (EC 2.1.1.43) (Set1/Ash2 histone methyltransferase complex subunit SET1) (SET-domain-containing protein 1A) Length = 1707 Score = 28.9 bits (63), Expect = 7.8 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Frame = -1 Query: 322 PTPPKPRQQEPAEEEEKKTVSTD----GLDARKLMEMVAALCERSAQQ 191 P PP PR EP E E+ T+ D GLD+ M + ER QQ Sbjct: 1407 PPPPPPRAYEPRSEFEQMTILYDIWNSGLDSED-MSYLRLTYERLLQQ 1453
>CCD96_MACFA (Q95LS7) Coiled-coil domain-containing protein 96| Length = 560 Score = 28.9 bits (63), Expect = 7.8 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%) Frame = -1 Query: 379 GEWEMVATGDGDVSTVEEDPTPPKP--RQQEPAEEEEKK 269 G+ E +A + PTPP+P + EP EEEE++ Sbjct: 16 GDGESLAARPSKIKASSGPPTPPEPGELESEPEEEEEEE 54
>TRI26_MOUSE (Q99PN3) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 545 Score = 28.9 bits (63), Expect = 7.8 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%) Frame = -1 Query: 451 VVLDKAVQTETELVADVDKASEAEGEWEMVATGDG--DVSTVEEDPTPPKPRQQEPAEEE 278 V L++ +E E + ++ E E E E V GDG D T EED + + ++E EEE Sbjct: 378 VELEREGWSEDEEEGEEEEEGEEEEEDEEVGYGDGYEDWETDEEDESLGEEEEEE--EEE 435 Query: 277 EKK 269 E++ Sbjct: 436 EEE 438
>RPOD_AGRT5 (P33452) RNA polymerase sigma factor rpoD (Sigma-A) (Major| vegetative sigma factor) Length = 684 Score = 28.9 bits (63), Expect = 7.8 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%) Frame = -1 Query: 430 QTETELVADVDKASEAEGEWEMVA-TGDGDVSTVEEDPTPPKPRQQEPAEEEEKKTVSTD 254 Q+ ++ AD A E E + A TGD DV+ V D PP +E E++++ +S Sbjct: 211 QSPEKIEADRKAAEEKEKTRRLRAPTGDEDVTDVGGDGLPP----EEEEEDDDESNLSLA 266 Query: 253 GLDARKLMEMVAAL 212 ++A +++ L Sbjct: 267 AMEAELRPQVMETL 280
>FA40B_MOUSE (Q8C9H6) Protein FAM40B| Length = 844 Score = 28.9 bits (63), Expect = 7.8 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -1 Query: 418 ELVADVDKASEAEGEWEMVATGDGDVSTVEEDPTPPKPRQQEP 290 E + ++ S A+GE T DG++ +E+DP P P Q P Sbjct: 378 EPATEEEEESAADGE----RTLDGELDLLEQDPLVPPPPSQTP 416
>IF2B_MOUSE (Q99L45) Eukaryotic translation initiation factor 2 subunit 2| (Eukaryotic translation initiation factor 2 beta subunit) (eIF-2-beta) Length = 331 Score = 28.9 bits (63), Expect = 7.8 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = -1 Query: 352 DGDVSTVEEDPTPPKPRQQEPAEEEEKKTVSTDGLDARK 236 +GD T E P+ K + EP EE K V D D+RK Sbjct: 28 EGDAQTEETQPSETKEVEPEPTEE---KDVDADEEDSRK 63
>RS12_CYAPA (Q9SMI3) 40S ribosomal protein S12| Length = 136 Score = 28.9 bits (63), Expect = 7.8 Identities = 27/77 (35%), Positives = 32/77 (41%) Frame = -1 Query: 394 ASEAEGEWEMVATGDGDVSTVEEDPTPPKPRQQEPAEEEEKKTVSTDGLDARKLMEMVAA 215 A EA E E +G DV T +E KK + DGL R L E A Sbjct: 2 ADEAIQEGEAAPSGTMDVMTA--------------LKEVLKKAMVVDGLK-RGLHECAKA 46 Query: 214 LCERSAQQCALIGALAE 164 L +RSAQ C L + E Sbjct: 47 LDQRSAQLCVLAANVNE 63
>TRI44_RAT (Q6QA27) Tripartite motif protein 44 (DIPB protein)| Length = 344 Score = 28.9 bits (63), Expect = 7.8 Identities = 15/52 (28%), Positives = 26/52 (50%) Frame = -1 Query: 424 ETELVADVDKASEAEGEWEMVATGDGDVSTVEEDPTPPKPRQQEPAEEEEKK 269 E E ++VD SE E E E + + D + E+ + Q+ AEE+ ++ Sbjct: 97 EEESESEVDSESEEESETEEDSEDESDEESEEDSEEEMEDEQESEAEEDNQE 148
>IE68_SHV21 (Q01042) Immediate-early protein| Length = 407 Score = 28.9 bits (63), Expect = 7.8 Identities = 17/50 (34%), Positives = 23/50 (46%) Frame = -1 Query: 424 ETELVADVDKASEAEGEWEMVATGDGDVSTVEEDPTPPKPRQQEPAEEEE 275 E E A+ ++A EAE E E + + EE +E AEEEE Sbjct: 113 EAEEEAEEEEAEEAEAEEEEAEEEEAEEEEAEEAEEEEAEEAEEEAEEEE 162 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,280,404 Number of Sequences: 219361 Number of extensions: 516611 Number of successful extensions: 3972 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 3424 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3851 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3478785780 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
