ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart55b09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 80 6e-12
2dbj|AP006162.2| Oryza sativa (japonica cultivar-group) genomic D... 80 6e-12
3dbj|AK106416.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 6e-12
4dbj|AK066582.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 6e-12
5ref|NM_205242.1| Gallus gallus low density lipoprotein-related p... 50 0.006
6emb|X74904.1|GGLRPA2MR G.gallus mRNA for LRP/alpha-2-macroglobul... 50 0.006
7ref|XM_465978.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.023
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.023
9dbj|AP006850.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.023
10dbj|AP005845.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.023
11dbj|AK068281.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.023
12gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 46 0.090
13ref|XM_550104.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.36
14ref|XM_470414.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.36
15gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.36
16gb|AC153001.7| Medicago truncatula clone mth2-95k24, complete se... 44 0.36
17gb|AC145164.11| Medicago truncatula clone mth2-27j21, complete s... 44 0.36
18gb|AC124961.19| Medicago truncatula clone mth2-18l7, complete se... 44 0.36
19gb|AC024935.34| Homo sapiens 12 BAC RP11-471G7 (Roswell Park Can... 44 0.36
20dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
21dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
22gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genom... 44 0.36
23dbj|AP003311.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
24dbj|AK101366.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.36
25dbj|AK059740.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.36
26emb|BX004774.4| Zebrafish DNA sequence from clone CH211-133L5, c... 44 0.36
27gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 42 1.4
28ref|NM_185699.1| Oryza sativa (japonica cultivar-group), Ozsa805... 42 1.4
29ref|NM_185689.1| Oryza sativa (japonica cultivar-group), Ozsa804... 42 1.4
30ref|XM_360252.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 1.4
31gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 42 1.4
32emb|CR759959.15| Zebrafish DNA sequence from clone DKEY-253H15 i... 42 1.4
33ref|XM_962809.1| PREDICTED: Tribolium castaneum similar to CG974... 42 1.4
34emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete ... 42 1.4
35emb|AL731600.3|OSJN00243 Oryza sativa genomic DNA, chromosome 4,... 42 1.4
36tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome 42 1.4
37dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
38dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
39dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
40dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
41dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
42emb|X55382.1|CRODA6 C.reinhardtii oda6 mRNA for 70kD dynein inte... 42 1.4
43emb|X68128.1|CRODA6DIC C.reinhardtii oda6 gene for dynein interm... 42 1.4
44dbj|AK108447.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
45dbj|AK108276.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
46dbj|AK106448.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
47dbj|AK064263.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
48gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
49emb|AL732638.6|CNS08C9D Oryza sativa chromosome 12, . Partial se... 42 1.4
50emb|AJ010303.1|SHK010303 Suid herpesvirus 1 putative UL47 and UL... 42 1.4
51ref|XM_480591.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.6
52ref|XM_464338.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.6
53ref|NM_193807.1| Oryza sativa (japonica cultivar-group), predic... 40 5.6
54ref|NM_187013.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.6
55ref|XM_364335.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 5.6
56gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence 40 5.6
57ref|XM_382574.1| Gibberella zeae PH-1 chromosome 1 predicted pro... 40 5.6
58gb|AC138464.19| Medicago truncatula clone mth2-29i23, complete s... 40 5.6
59gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 5.6
60emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete ... 40 5.6
61gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence 40 5.6
62dbj|AP003281.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
63gb|AC011806.1|AC011806 Genomic Sequence For Oryza sativa Clone 1... 40 5.6
64gb|L35913.1|MZELIPASE Zea mays dehydrin (dhn-2) mRNA, complete cds 40 5.6
65dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
66dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
67dbj|AP008247.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
68gb|AY188085.1| Mus musculus homeodomain transcription factor BAR... 40 5.6
69dbj|AP006530.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
70dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.6
71gb|AC137696.2| Genomic sequence for Oryza sativa, Nipponbare str... 40 5.6
72gb|AC134229.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
73dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 5.6
74dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
75dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
76dbj|AP003858.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
77dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
78dbj|AP005536.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
79dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
80dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
81dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
82dbj|AP004565.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
83dbj|AK105265.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
84gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 5.6
85emb|BX936462.20| Zebrafish DNA sequence from clone CH211-147O6 i... 40 5.6
86emb|BX470265.3| Zebrafish DNA sequence from clone CH211-87A14 in... 40 5.6
87gb|AY111114.1| Zea mays CL2452_1 mRNA sequence 40 5.6
88dbj|AB083156.1| Ajellomyces capsulatus var. farciminosus gene fo... 40 5.6
89dbj|AB083155.1| Ajellomyces capsulatus var. duboisii gene for H-... 40 5.6
90dbj|AB083154.1| Ajellomyces capsulatus var. duboisii gene for H-... 40 5.6
91dbj|AB083153.1| Ajellomyces capsulatus gene for H-ATPase, TA rep... 40 5.6
92dbj|AB083152.1| Ajellomyces capsulatus gene for H-ATPase, TA rep... 40 5.6
93dbj|AB083151.1| Ajellomyces capsulatus gene for H-ATPase, TA rep... 40 5.6
94dbj|AB083148.1| Ajellomyces capsulatus gene for H-ATPase, TA rep... 40 5.6
95dbj|AB083147.1| Ajellomyces capsulatus gene for H-ATPase, TA rep... 40 5.6
96dbj|AB083144.1| Ajellomyces capsulatus var. duboisii gene for H-... 40 5.6
97dbj|AB083143.1| Ajellomyces capsulatus gene for H-ATPase, TA rep... 40 5.6
98dbj|AB083142.1| Ajellomyces capsulatus gene for H-ATPase, TA rep... 40 5.6
99dbj|AB083141.1| Ajellomyces capsulatus gene for H-ATPase, TA rep... 40 5.6
100dbj|AB083140.1| Ajellomyces capsulatus var. farciminosus gene fo... 40 5.6
101dbj|AB083139.1| Ajellomyces capsulatus gene for H-ATPase, TA rep... 40 5.6
102emb|AL713907.3|CNS07YQ7 Oryza sativa chromosome 12, . BAC OJ1057... 40 5.6
103gb|DQ019316.1| Gibberella zeae aldehyde dehydrogenase (ALD), het... 40 5.6
104dbj|AP004538.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 5.6
105dbj|AB062980.1| Macaca fascicularis brain cDNA clone:QmoA-10611,... 40 5.6
106dbj|D86021.1| Pseudomonas putida rpoD gene for RNA polymerase si... 40 5.6
107dbj|AB039579.1| Pseudomonas putida rpoD gene for DNA-directed RN... 40 5.6 
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                            
Query: 268      cgcaccgcagcccgacctccaccagcctctccgcggcggccacggggaacgagtcgccca 327
                ||||||||||||| || |||| ||||||||||||  | |||   ||||||||||||||||
Sbjct: 22551985 cgcaccgcagccccacatccagcagcctctccgccaccgcctgcgggaacgagtcgccca 22552044

                                                
Query: 328      gccgccggtccagccagctccgcacccgcccg 359
                ||| || ||||| |||||||| ||||||||||
Sbjct: 22552045 gcctcctgtccacccagctcctcacccgcccg 22552076
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>dbj|AP006162.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1331F11
          Length = 132205

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                         
Query: 268   cgcaccgcagcccgacctccaccagcctctccgcggcggccacggggaacgagtcgccca 327
             ||||||||||||| || |||| ||||||||||||  | |||   ||||||||||||||||
Sbjct: 67186 cgcaccgcagccccacatccagcagcctctccgccaccgcctgcgggaacgagtcgccca 67245

                                             
Query: 328   gccgccggtccagccagctccgcacccgcccg 359
             ||| || ||||| |||||||| ||||||||||
Sbjct: 67246 gcctcctgtccacccagctcctcacccgcccg 67277
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>dbj|AK106416.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-A06, full
           insert sequence
          Length = 1987

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                       
Query: 268 cgcaccgcagcccgacctccaccagcctctccgcggcggccacggggaacgagtcgccca 327
           ||||||||||||| || |||| ||||||||||||  | |||   ||||||||||||||||
Sbjct: 938 cgcaccgcagccccacatccagcagcctctccgccaccgcctgcgggaacgagtcgccca 879

                                           
Query: 328 gccgccggtccagccagctccgcacccgcccg 359
           ||| || ||||| |||||||| ||||||||||
Sbjct: 878 gcctcctgtccacccagctcctcacccgcccg 847
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>dbj|AK066582.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071J07, full
            insert sequence
          Length = 1315

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                        
Query: 268  cgcaccgcagcccgacctccaccagcctctccgcggcggccacggggaacgagtcgccca 327
            ||||||||||||| || |||| ||||||||||||  | |||   ||||||||||||||||
Sbjct: 1047 cgcaccgcagccccacatccagcagcctctccgccaccgcctgcgggaacgagtcgccca 988

                                            
Query: 328  gccgccggtccagccagctccgcacccgcccg 359
            ||| || ||||| |||||||| ||||||||||
Sbjct: 987  gcctcctgtccacccagctcctcacccgcccg 956
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>ref|NM_205242.1| Gallus gallus low density lipoprotein-related protein 1 (LRP1), mRNA
          Length = 15598

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 366   accgcctccgccgccgtgtccaccaccgacacg 398
             ||||||||||||| |||| ||||||||||||||
Sbjct: 13831 accgcctccgccgtcgtgcccaccaccgacacg 13863
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>emb|X74904.1|GGLRPA2MR G.gallus mRNA for LRP/alpha-2-macroglobulin receptor
          Length = 15598

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 366   accgcctccgccgccgtgtccaccaccgacacg 398
             ||||||||||||| |||| ||||||||||||||
Sbjct: 13831 accgcctccgccgtcgtgcccaccaccgacacg 13863
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>ref|XM_465978.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1512

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 242 ctcctcttcctcgtcgtcgccggcgacg 269
           |||||| |||||||||||||||||||||
Sbjct: 334 ctcctcctcctcgtcgtcgccggcgacg 361
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 242      ctcctcttcctcgtcgtcgccggcgacg 269
                |||||| |||||||||||||||||||||
Sbjct: 18845135 ctcctcctcctcgtcgtcgccggcgacg 18845108



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 362      ccggaccgcctccgccgccg 381
                ||||||||||||||||||||
Sbjct: 23764898 ccggaccgcctccgccgccg 23764879



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 243      tcctcttcctcgtcgtcgccggcg 266
                ||||| ||||||||||||||||||
Sbjct: 10270744 tcctcctcctcgtcgtcgccggcg 10270721



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 246     tcttcctcgtcgtcgccggcgacg 269
               |||||||||||| |||||||||||
Sbjct: 4559739 tcttcctcgtcgccgccggcgacg 4559716
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>dbj|AP006850.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
             fosmid clone:OSJNOa257A21
          Length = 34833

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 242   ctcctcttcctcgtcgtcgccggcgacg 269
             |||||| |||||||||||||||||||||
Sbjct: 29377 ctcctcctcctcgtcgtcgccggcgacg 29350
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>dbj|AP005845.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0461D06
          Length = 112895

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 242  ctcctcttcctcgtcgtcgccggcgacg 269
            |||||| |||||||||||||||||||||
Sbjct: 8668 ctcctcctcctcgtcgtcgccggcgacg 8641
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>dbj|AK068281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146J12, full
           insert sequence
          Length = 1512

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 242 ctcctcttcctcgtcgtcgccggcgacg 269
           |||||| |||||||||||||||||||||
Sbjct: 334 ctcctcctcctcgtcgtcgccggcgacg 361
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 367     ccgcctccgccgccgtgtccacc 389
               |||||||||||||||||||||||
Sbjct: 1235759 ccgcctccgccgccgtgtccacc 1235781
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>ref|XM_550104.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1056

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 245 ctcttcctcgtcgtcgccggcgacgc 270
           ||||| ||||||||||||||||||||
Sbjct: 48  ctctttctcgtcgtcgccggcgacgc 73
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>ref|XM_470414.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 846

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 248 ttcctcgtcgtcgccggcgacg 269
           ||||||||||||||||||||||
Sbjct: 43  ttcctcgtcgtcgccggcgacg 64
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 248      ttcctcgtcgtcgccggcgacg 269
                ||||||||||||||||||||||
Sbjct: 35515623 ttcctcgtcgtcgccggcgacg 35515602



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 368     cgcctccgccgccgtgtccaccac 391
               |||| |||||||||||||||||||
Sbjct: 7181082 cgccgccgccgccgtgtccaccac 7181105
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>gb|AC153001.7| Medicago truncatula clone mth2-95k24, complete sequence
          Length = 100724

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 59    gcagtagatgtgaaaagaagaagaag 84
             |||||||||| |||||||||||||||
Sbjct: 65241 gcagtagatgagaaaagaagaagaag 65216
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>gb|AC145164.11| Medicago truncatula clone mth2-27j21, complete sequence
          Length = 110295

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 59    gcagtagatgtgaaaagaagaagaag 84
             |||||||||| |||||||||||||||
Sbjct: 87532 gcagtagatgagaaaagaagaagaag 87557
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>gb|AC124961.19| Medicago truncatula clone mth2-18l7, complete sequence
          Length = 106560

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 59    gcagtagatgtgaaaagaagaagaag 84
             |||||||||| |||||||||||||||
Sbjct: 37234 gcagtagatgagaaaagaagaagaag 37259
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>gb|AC024935.34| Homo sapiens 12 BAC RP11-471G7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 102102

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 50    acagtacaagcagtagatgtga 71
             ||||||||||||||||||||||
Sbjct: 33143 acagtacaagcagtagatgtga 33164
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 248      ttcctcgtcgtcgccggcgacg 269
                ||||||||||||||||||||||
Sbjct: 35605695 ttcctcgtcgtcgccggcgacg 35605674



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 368     cgcctccgccgccgtgtccaccac 391
               |||| |||||||||||||||||||
Sbjct: 7178977 cgccgccgccgccgtgtccaccac 7179000
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 245     ctcttcctcgtcgtcgccggcgacgc 270
               ||||| ||||||||||||||||||||
Sbjct: 2385420 ctctttctcgtcgtcgccggcgacgc 2385445



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 242      ctcctcttcctcgtcgtcgccggc 265
                |||||||||||||||| |||||||
Sbjct: 15064959 ctcctcttcctcgtcggcgccggc 15064982
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>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete
             sequence
          Length = 145290

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 248   ttcctcgtcgtcgccggcgacg 269
             ||||||||||||||||||||||
Sbjct: 48586 ttcctcgtcgtcgccggcgacg 48565
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>dbj|AP003311.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0024G09
          Length = 175565

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 245    ctcttcctcgtcgtcgccggcgacgc 270
              ||||| ||||||||||||||||||||
Sbjct: 114470 ctctttctcgtcgtcgccggcgacgc 114495
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>dbj|AK101366.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035L04, full
           insert sequence
          Length = 916

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 248 ttcctcgtcgtcgccggcgacg 269
           ||||||||||||||||||||||
Sbjct: 55  ttcctcgtcgtcgccggcgacg 76
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>dbj|AK059740.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-F03, full
           insert sequence
          Length = 1056

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 245 ctcttcctcgtcgtcgccggcgacgc 270
           ||||| ||||||||||||||||||||
Sbjct: 48  ctctttctcgtcgtcgccggcgacgc 73
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>emb|BX004774.4| Zebrafish DNA sequence from clone CH211-133L5, complete sequence
          Length = 186380

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 229    ccatctccggccgctcctcttc 250
              ||||||||||||||||||||||
Sbjct: 131049 ccatctccggccgctcctcttc 131028
to top
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 109    gccggtcgggctatcgcggcg 129
              |||||||||||||||||||||
Sbjct: 276223 gccggtcgggctatcgcggcg 276243
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>ref|NM_185699.1| Oryza sativa (japonica cultivar-group), Ozsa8050 predicted mRNA
          Length = 1137

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 249 tcctcgtcgtcgccggcgacg 269
           |||||||||||||||||||||
Sbjct: 854 tcctcgtcgtcgccggcgacg 874
to top
>ref|NM_185689.1| Oryza sativa (japonica cultivar-group), Ozsa8040 predicted mRNA
          Length = 1137

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 249 tcctcgtcgtcgccggcgacg 269
           |||||||||||||||||||||
Sbjct: 854 tcctcgtcgtcgccggcgacg 874
to top
>ref|XM_360252.1| Magnaporthe grisea 70-15 hypothetical protein (MG05626.4) partial
           mRNA
          Length = 3651

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 241 gctcctcttcctcgtcgtcgccggc 265
           |||||||||||||||| ||||||||
Sbjct: 163 gctcctcttcctcgtcttcgccggc 139
to top
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 365     gaccgcctccgccgccgtgtc 385
               |||||||||||||||||||||
Sbjct: 1083556 gaccgcctccgccgccgtgtc 1083576
to top
>emb|CR759959.15| Zebrafish DNA sequence from clone DKEY-253H15 in linkage group 5,
             complete sequence
          Length = 170133

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 233   ctccggccgctcctcttcctc 253
             |||||||||||||||||||||
Sbjct: 86042 ctccggccgctcctcttcctc 86062
to top
>ref|XM_962809.1| PREDICTED: Tribolium castaneum similar to CG9748-PA (LOC656268),
           mRNA
          Length = 2100

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 365 gaccgcctccgccgccgtgtccaccaccg 393
           |||||||||||||||||  ||||||||||
Sbjct: 472 gaccgcctccgccgccgcctccaccaccg 444
to top
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29
          Length = 283100

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 362   ccggaccgcctccgccgccgt 382
             |||||||||||||||||||||
Sbjct: 45955 ccggaccgcctccgccgccgt 45935
to top
>emb|AL731600.3|OSJN00243 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0055C08,
             complete sequence
          Length = 145670

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 249   tcctcgtcgtcgccggcgacg 269
             |||||||||||||||||||||
Sbjct: 29752 tcctcgtcgtcgccggcgacg 29772
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>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome
          Length = 143461

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 242   ctcctcttcctcgtcgtcgcc 262
             |||||||||||||||||||||
Sbjct: 15570 ctcctcttcctcgtcgtcgcc 15550
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 249      tcctcgtcgtcgccggcgacg 269
                |||||||||||||||||||||
Sbjct: 19247920 tcctcgtcgtcgccggcgacg 19247940
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 298     ccgcggcggccacggggaacg 318
               |||||||||||||||||||||
Sbjct: 3796388 ccgcggcggccacggggaacg 3796368



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 373      ccgccgccgtgtccaccacc 392
                ||||||||||||||||||||
Sbjct: 16411128 ccgccgccgtgtccaccacc 16411109
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 249     tcctcgtcgtcgccggcgacg 269
               |||||||||||||||||||||
Sbjct: 3895860 tcctcgtcgtcgccggcgacg 3895880



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 249     tcctcgtcgtcgccggcgacg 269
               |||||||||||||||||||||
Sbjct: 3884037 tcctcgtcgtcgccggcgacg 3884057



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 249     tcctcgtcgtcgccggcgacg 269
               |||||||||||||||||||||
Sbjct: 3845981 tcctcgtcgtcgccggcgacg 3846001



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 250     cctcgtcgtcgccggcgacg 269
               ||||||||||||||||||||
Sbjct: 5789819 cctcgtcgtcgccggcgacg 5789838
to top
>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBa0035I03
          Length = 153749

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 249  tcctcgtcgtcgccggcgacg 269
            |||||||||||||||||||||
Sbjct: 1736 tcctcgtcgtcgccggcgacg 1756
to top
>dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0015E04
          Length = 152046

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 249    tcctcgtcgtcgccggcgacg 269
              |||||||||||||||||||||
Sbjct: 141991 tcctcgtcgtcgccggcgacg 142011



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 249    tcctcgtcgtcgccggcgacg 269
              |||||||||||||||||||||
Sbjct: 103935 tcctcgtcgtcgccggcgacg 103955
to top
>emb|X55382.1|CRODA6 C.reinhardtii oda6 mRNA for 70kD dynein intermediate chain
          Length = 2603

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 376  ccgccgtgtccaccaccgacacgcgcgcc 404
            ||||||||||| ||||| |||||||||||
Sbjct: 1495 ccgccgtgtcctccacccacacgcgcgcc 1467
to top
>emb|X68128.1|CRODA6DIC C.reinhardtii oda6 gene for dynein intermediate chain
          Length = 4516

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 376  ccgccgtgtccaccaccgacacgcgcgcc 404
            ||||||||||| ||||| |||||||||||
Sbjct: 2979 ccgccgtgtcctccacccacacgcgcgcc 2951
to top
>dbj|AK108447.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-C05, full
           insert sequence
          Length = 838

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 298 ccgcggcggccacggggaacg 318
           |||||||||||||||||||||
Sbjct: 71  ccgcggcggccacggggaacg 91
to top
>dbj|AK108276.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-C08, full
           insert sequence
          Length = 1228

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 249 tcctcgtcgtcgccggcgacg 269
           |||||||||||||||||||||
Sbjct: 324 tcctcgtcgtcgccggcgacg 344
to top
>dbj|AK106448.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-E09, full
           insert sequence
          Length = 1326

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 298 ccgcggcggccacggggaacg 318
           |||||||||||||||||||||
Sbjct: 99  ccgcggcggccacggggaacg 119
to top
>dbj|AK064263.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-D08, full
           insert sequence
          Length = 1453

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 298 ccgcggcggccacggggaacg 318
           |||||||||||||||||||||
Sbjct: 85  ccgcggcggccacggggaacg 105
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 298     ccgcggcggccacggggaacg 318
               |||||||||||||||||||||
Sbjct: 3796362 ccgcggcggccacggggaacg 3796342



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 373      ccgccgccgtgtccaccacc 392
                ||||||||||||||||||||
Sbjct: 16364361 ccgccgccgtgtccaccacc 16364342
to top
>emb|AL732638.6|CNS08C9D Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0010K22
             of library OSJNBa from chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 92728

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 298   ccgcggcggccacggggaacg 318
             |||||||||||||||||||||
Sbjct: 43657 ccgcggcggccacggggaacg 43677
to top
>emb|AJ010303.1|SHK010303 Suid herpesvirus 1 putative UL47 and UL46 genes and partial gB gene,
            strain Kaplan
          Length = 5317

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 242  ctcctcttcctcgtcgtcgcc 262
            |||||||||||||||||||||
Sbjct: 4005 ctcctcttcctcgtcgtcgcc 3985
to top
>ref|XM_480591.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 867

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 238 gccgctcctcttcctcgtcg 257
           ||||||||||||||||||||
Sbjct: 363 gccgctcctcttcctcgtcg 382
to top
>ref|XM_464338.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1047

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 246 tcttcctcgtcgtcgccggcgacg 269
           |||||||||||| |||||||||||
Sbjct: 821 tcttcctcgtcgccgccggcgacg 798
to top
>ref|NM_193807.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3369

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 242 ctcctcttcctcgtcgtcgccggc 265
           |||||||||||||||| |||||||
Sbjct: 234 ctcctcttcctcgtcggcgccggc 211
to top
>ref|NM_187013.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1032

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 385 ccaccaccgacacgcgcgcc 404
           ||||||||||||||||||||
Sbjct: 337 ccaccaccgacacgcgcgcc 318
to top
>ref|XM_364335.1| Magnaporthe grisea 70-15 hypothetical protein (MG09180.4) partial
           mRNA
          Length = 1332

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 252 tcgtcgtcgccggcgacgca 271
           ||||||||||||||||||||
Sbjct: 287 tcgtcgtcgccggcgacgca 268
to top
>gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence
          Length = 204120

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 242   ctcctcttcctcgtcgtcgccggc 265
             |||||||||||| |||||||||||
Sbjct: 25954 ctcctcttcctcctcgtcgccggc 25977
to top
>ref|XM_382574.1| Gibberella zeae PH-1 chromosome 1 predicted protein (FG02398.1)
           partial mRNA
          Length = 999

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 gcagcccgacctccaccagc 293
           ||||||||||||||||||||
Sbjct: 374 gcagcccgacctccaccagc 393
to top
>gb|AC138464.19| Medicago truncatula clone mth2-29i23, complete sequence
          Length = 134105

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    acaagcagtagatgtgaaaa 74
             ||||||||||||||||||||
Sbjct: 37960 acaagcagtagatgtgaaaa 37941
to top
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 247   cttcctcgtcgtcgccggcgacgc 270
             ||||||||||| ||||||||||||
Sbjct: 48087 cttcctcgtcggcgccggcgacgc 48064
to top
>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29
          Length = 248550

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 259    cgccggcgacgcaccgcagc 278
              ||||||||||||||||||||
Sbjct: 184760 cgccggcgacgcaccgcagc 184741
to top
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence
          Length = 261265

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 243    tcctcttcctcgtcgtcgcc 262
              ||||||||||||||||||||
Sbjct: 114168 tcctcttcctcgtcgtcgcc 114149



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 243   tcctcttcctcgtcgtcgcc 262
             ||||||||||||||||||||
Sbjct: 74453 tcctcttcctcgtcgtcgcc 74434
to top
>dbj|AP003281.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0560B06
          Length = 161720

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 242   ctcctcttcctcgtcgtcgccggc 265
             |||||||||||||||| |||||||
Sbjct: 81011 ctcctcttcctcgtcggcgccggc 81034
to top
>gb|AC011806.1|AC011806 Genomic Sequence For Oryza sativa Clone 10P20, Lemont Strain, Complete
             Sequence, complete sequence
          Length = 105198

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 242   ctcctcttcctcgtcgtcgccggc 265
             |||||||||||||||| |||||||
Sbjct: 18728 ctcctcttcctcgtcggcgccggc 18751
to top
>gb|L35913.1|MZELIPASE Zea mays dehydrin (dhn-2) mRNA, complete cds
          Length = 1277

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 242 ctcctcttcctcgtcgtcgc 261
           ||||||||||||||||||||
Sbjct: 353 ctcctcttcctcgtcgtcgc 334
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 238     gccgctcctcttcctcgtcg 257
               ||||||||||||||||||||
Sbjct: 6060427 gccgctcctcttcctcgtcg 6060446
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 385      ccaccaccgacacgcgcgcc 404
                ||||||||||||||||||||
Sbjct: 23743367 ccaccaccgacacgcgcgcc 23743348
to top
>dbj|AP008247.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0784G04
          Length = 157458

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 242   ctcctcttcctcgtcgtcgccggc 265
             |||||||||||||||| |||||||
Sbjct: 94538 ctcctcttcctcgtcggcgccggc 94561
to top
>gb|AY188085.1| Mus musculus homeodomain transcription factor BARX2 (Barx2) gene,
            promoter region, exon 1 and partial cds
          Length = 5590

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 161  cggctgcagcgtgcgctccc 180
            ||||||||||||||||||||
Sbjct: 2190 cggctgcagcgtgcgctccc 2171
to top
>dbj|AP006530.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1329D01
          Length = 141938

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 242   ctcctcttcctcgtcgtcgccggc 265
             |||||||||||||||| |||||||
Sbjct: 91206 ctcctcttcctcgtcggcgccggc 91229
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 199     acacccgcgacaccttgccggcca 222
               ||||| ||||||||||||||||||
Sbjct: 4197207 acaccggcgacaccttgccggcca 4197230
to top
>gb|AC137696.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0049C20, from chromosome 3, complete sequence
          Length = 136098

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 368   cgcctccgccgccgtgtccaccac 391
             |||| |||||||||||||||||||
Sbjct: 13256 cgccgccgccgccgtgtccaccac 13233
to top
>gb|AC134229.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1081D05,
            complete sequence
          Length = 99133

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 368  cgcctccgccgccgtgtccaccac 391
            |||| |||||||||||||||||||
Sbjct: 7835 cgccgccgccgccgtgtccaccac 7858
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 248     ttcctcgtcgtcgccggcga 267
               ||||||||||||||||||||
Sbjct: 9084365 ttcctcgtcgtcgccggcga 9084346
to top
>dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0043B10
          Length = 167399

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 242   ctcctcttcctcgtcgtcgccggc 265
             |||||||||||||||| |||||||
Sbjct: 36925 ctcctcttcctcgtcggcgccggc 36948
to top
>dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0701E03
          Length = 183245

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 250    cctcgtcgtcgccggcgacg 269
              ||||||||||||||||||||
Sbjct: 105348 cctcgtcgtcgccggcgacg 105367
to top
>dbj|AP003858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1014_H11
          Length = 122464

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 238    gccgctcctcttcctcgtcg 257
              ||||||||||||||||||||
Sbjct: 111239 gccgctcctcttcctcgtcg 111258
to top
>dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1060_D03
          Length = 102178

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 385   ccaccaccgacacgcgcgcc 404
             ||||||||||||||||||||
Sbjct: 87981 ccaccaccgacacgcgcgcc 87962
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>dbj|AP005536.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0055M07
          Length = 150901

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 243    tcctcttcctcgtcgtcgccggcg 266
              ||||| ||||||||||||||||||
Sbjct: 143110 tcctcctcctcgtcgtcgccggcg 143087
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>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0444A09
          Length = 125900

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 243   tcctcttcctcgtcgtcgccggcg 266
             ||||| ||||||||||||||||||
Sbjct: 36554 tcctcctcctcgtcgtcgccggcg 36531
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>dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1297_C09
          Length = 163378

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 246   tcttcctcgtcgtcgccggcgacg 269
             |||||||||||| |||||||||||
Sbjct: 95118 tcttcctcgtcgccgccggcgacg 95095
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>dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1058_F07
          Length = 95841

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 362   ccggaccgcctccgccgccg 381
             ||||||||||||||||||||
Sbjct: 75482 ccggaccgcctccgccgccg 75463
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>dbj|AP004565.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0486F07
          Length = 154926

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   gccgctcctcttcctcgtcg 257
             ||||||||||||||||||||
Sbjct: 16444 gccgctcctcttcctcgtcg 16463
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>dbj|AK105265.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-D05, full
           insert sequence
          Length = 3749

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 242 ctcctcttcctcgtcgtcgccggc 265
           |||||||||||||||| |||||||
Sbjct: 326 ctcctcttcctcgtcggcgccggc 303
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 249     tcctcgtcgtcgccggcgac 268
               ||||||||||||||||||||
Sbjct: 1492675 tcctcgtcgtcgccggcgac 1492694
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>emb|BX936462.20| Zebrafish DNA sequence from clone CH211-147O6 in linkage group 20,
              complete sequence
          Length = 196432

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 45     aaagtacagtacaagcagta 64
              ||||||||||||||||||||
Sbjct: 142952 aaagtacagtacaagcagta 142971
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>emb|BX470265.3| Zebrafish DNA sequence from clone CH211-87A14 in linkage group 20,
             complete sequence
          Length = 166824

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    aaagtacagtacaagcagta 64
             ||||||||||||||||||||
Sbjct: 78082 aaagtacagtacaagcagta 78063
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>gb|AY111114.1| Zea mays CL2452_1 mRNA sequence
          Length = 1256

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 242 ctcctcttcctcgtcgtcgc 261
           ||||||||||||||||||||
Sbjct: 353 ctcctcttcctcgtcgtcgc 334
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>dbj|AB083156.1| Ajellomyces capsulatus var. farciminosus gene for H-ATPase, TA
           repeat sequence, strain:IFM41334
          Length = 294

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 386 caccaccgacacgcgcgcca 405
           ||||||||||||||||||||
Sbjct: 16  caccaccgacacgcgcgcca 35
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>dbj|AB083155.1| Ajellomyces capsulatus var. duboisii gene for H-ATPase, TA repeat
           sequence, strain:IFM41332
          Length = 297

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 386 caccaccgacacgcgcgcca 405
           ||||||||||||||||||||
Sbjct: 16  caccaccgacacgcgcgcca 35
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>dbj|AB083154.1| Ajellomyces capsulatus var. duboisii gene for H-ATPase, TA repeat
           sequence, strain:IFM5415
          Length = 297

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 386 caccaccgacacgcgcgcca 405
           ||||||||||||||||||||
Sbjct: 16  caccaccgacacgcgcgcca 35
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>dbj|AB083153.1| Ajellomyces capsulatus gene for H-ATPase, TA repeat sequence,
           strain:IFM46159
          Length = 287

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 386 caccaccgacacgcgcgcca 405
           ||||||||||||||||||||
Sbjct: 16  caccaccgacacgcgcgcca 35
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>dbj|AB083152.1| Ajellomyces capsulatus gene for H-ATPase, TA repeat sequence,
           strain:IFM40752
          Length = 287

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 386 caccaccgacacgcgcgcca 405
           ||||||||||||||||||||
Sbjct: 16  caccaccgacacgcgcgcca 35
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>dbj|AB083151.1| Ajellomyces capsulatus gene for H-ATPase, TA repeat sequence,
           strain:IFM41329
          Length = 299

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 386 caccaccgacacgcgcgcca 405
           ||||||||||||||||||||
Sbjct: 16  caccaccgacacgcgcgcca 35
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>dbj|AB083148.1| Ajellomyces capsulatus gene for H-ATPase, TA repeat sequence,
           strain:HP9
          Length = 282

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 386 caccaccgacacgcgcgcca 405
           ||||||||||||||||||||
Sbjct: 16  caccaccgacacgcgcgcca 35
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>dbj|AB083147.1| Ajellomyces capsulatus gene for H-ATPase, TA repeat sequence,
           strain:HP3
          Length = 274

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 386 caccaccgacacgcgcgcca 405
           ||||||||||||||||||||
Sbjct: 16  caccaccgacacgcgcgcca 35
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>dbj|AB083144.1| Ajellomyces capsulatus var. duboisii gene for H-ATPase, TA repeat
           sequence, strain:IFM50954
          Length = 299

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 386 caccaccgacacgcgcgcca 405
           ||||||||||||||||||||
Sbjct: 16  caccaccgacacgcgcgcca 35
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>dbj|AB083143.1| Ajellomyces capsulatus gene for H-ATPase, TA repeat sequence,
           strain:IFM49110
          Length = 281

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 386 caccaccgacacgcgcgcca 405
           ||||||||||||||||||||
Sbjct: 16  caccaccgacacgcgcgcca 35
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>dbj|AB083142.1| Ajellomyces capsulatus gene for H-ATPase, TA repeat sequence,
           strain:IFM49109
          Length = 279

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 386 caccaccgacacgcgcgcca 405
           ||||||||||||||||||||
Sbjct: 16  caccaccgacacgcgcgcca 35
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>dbj|AB083141.1| Ajellomyces capsulatus gene for H-ATPase, TA repeat sequence,
           strain:IFM47750
          Length = 291

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 386 caccaccgacacgcgcgcca 405
           ||||||||||||||||||||
Sbjct: 16  caccaccgacacgcgcgcca 35
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>dbj|AB083140.1| Ajellomyces capsulatus var. farciminosus gene for H-ATPase, TA
           repeat sequence, strain:IFM41612
          Length = 295

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 386 caccaccgacacgcgcgcca 405
           ||||||||||||||||||||
Sbjct: 16  caccaccgacacgcgcgcca 35
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>dbj|AB083139.1| Ajellomyces capsulatus gene for H-ATPase, TA repeat sequence,
           strain:IFM41330
          Length = 278

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 386 caccaccgacacgcgcgcca 405
           ||||||||||||||||||||
Sbjct: 16  caccaccgacacgcgcgcca 35
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>emb|AL713907.3|CNS07YQ7 Oryza sativa chromosome 12, . BAC OJ1057_E03 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 127989

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 373   ccgccgccgtgtccaccacc 392
             ||||||||||||||||||||
Sbjct: 41263 ccgccgccgtgtccaccacc 41282
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>gb|DQ019316.1| Gibberella zeae aldehyde dehydrogenase (ALD), heterokaryon
             incompatibility protein (HET), non-ribosomal peptide
             synthetase (NPS), monocarboxylate transporter like-protein
             (MCT), and K+ channel protein (KAT) genes, complete cds;
             PKS gene cluster, complete sequence; and polyketide
             synthase (PKS13), bZIP domain-containing transcription
             factor (ZEB2), protein kinase Eg2-like protein (STK), and
             Ca2+ ATPase (ACA) genes, complete cds
          Length = 49993

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   gcagcccgacctccaccagc 293
             ||||||||||||||||||||
Sbjct: 38216 gcagcccgacctccaccagc 38197
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>dbj|AP004538.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04C07, TM0098b,
             complete sequence
          Length = 28884

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    acaagcagtagatgtgaaaa 74
             ||||||||||||||||||||
Sbjct: 18767 acaagcagtagatgtgaaaa 18748
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>dbj|AB062980.1| Macaca fascicularis brain cDNA clone:QmoA-10611, full insert
           sequence
          Length = 2606

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 241 gctcctcttcctcgtcgtcg 260
           ||||||||||||||||||||
Sbjct: 516 gctcctcttcctcgtcgtcg 497
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>dbj|D86021.1| Pseudomonas putida rpoD gene for RNA polymerase sigma-70 factor,
           partial cds, strain: A10L
          Length = 807

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 244 cctcttcctcgtcgtcgccg 263
           ||||||||||||||||||||
Sbjct: 304 cctcttcctcgtcgtcgccg 285
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>dbj|AB039579.1| Pseudomonas putida rpoD gene for DNA-directed RNA polymerase
           subunit D, partial cds, strain:A10L
          Length = 807

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 244 cctcttcctcgtcgtcgccg 263
           ||||||||||||||||||||
Sbjct: 304 cctcttcctcgtcgtcgccg 285


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,787,930
Number of Sequences: 3902068
Number of extensions: 3787930
Number of successful extensions: 109100
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106693
Number of HSP's gapped (non-prelim): 2403
length of query: 415
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 393
effective length of database: 17,147,199,772
effective search space: 6738849510396
effective search space used: 6738849510396
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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