ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart55b06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_474682.1| Oryza sativa (japonica cultivar-group), predic... 62 2e-06
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
3dbj|AK067970.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
4emb|AL662994.3|OSJN00192 Oryza sativa genomic DNA, chromosome 4,... 62 2e-06
5emb|AL662934.3|OSJN00136 Oryza sativa genomic DNA, chromosome 4,... 62 2e-06
6gb|AY110514.1| Zea mays CL948_1 mRNA sequence 58 3e-05
7gb|AC136842.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
8gb|AC148171.16| Medicago truncatula clone mth2-30a2, complete se... 42 1.5
9gb|AC118347.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
10dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
11dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
12dbj|AP003413.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
13dbj|AP003308.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
14gb|AC141896.5| Mus musculus BAC clone RP23-238B2 from 5, complet... 42 1.5
15emb|CT573055.2| Medicago truncatula chromosome 5 clone mth2-75o1... 42 1.5
16gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
17emb|AL139111.20| Human DNA sequence from clone RP13-46G5 on chro... 42 1.5
18gb|AC154034.1| Medicago truncatula chromosome 7 BAC clone mth2-7... 40 6.1
19emb|CR450841.7| Zebrafish DNA sequence from clone DKEY-16N9 in l... 40 6.1
20ref|XM_387306.1| Gibberella zeae PH-1 chromosome 4 predicted pro... 40 6.1
21gb|AC007528.5| Homo sapiens 12 BAC RP11-473N11 (Roswell Park Can... 40 6.1
22ref|XM_722035.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 6.1
23ref|XM_670009.1| Plasmodium berghei strain ANKA Pb-reticulocyte ... 40 6.1
24emb|AL157812.5| Human DNA sequence from clone RP11-14B2 on chrom... 40 6.1
25gb|AC106914.5| Rattus norvegicus BAC CH230-12M19 (Children's Ho... 40 6.1
26gb|AC114975.2| Homo sapiens chromosome 5 clone RP11-484L7, compl... 40 6.1
27dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
28dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
29dbj|AP003538.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
30dbj|AP005536.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
31dbj|AP004770.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
32gb|AF139500.1|AF139500 Prunus armeniaca p69RF mRNA, partial cds 40 6.1
33gb|AC006141.2|AC006141 Homo sapiens chromosome 17, clone hRPK.42... 40 6.1
34emb|AL132640.4|CNS01DT5 Human chromosome 14 DNA sequence BAC R-6... 40 6.1
35emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 6.1
36emb|AJ278826.1|PBE278826 Plasmodium berghei OMPDC gene, ORF1 to ... 40 6.1

>ref|XM_474682.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1128

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 100/123 (81%)
 Strand = Plus / Minus

                                                                        
Query: 241  gacaacaactccttgatggggccgtacaccctcgtcgaggctggatggaaatgcgtgctg 300
            ||||||| ||||||||| ||||| |||| |||||| ||    ||||| ||||| ||||||
Sbjct: 1013 gacaacagctccttgatcgggccatacatcctcgtggaaatcggatgaaaatgggtgctg 954

                                                                        
Query: 301  aagaagaacgcgatcgagaccctcggagcagcgttctttgccaacaccctatgttccaca 360
            |||||  | || |||||||| |||||  ||| |||||| |||| ||| ||||| ||||||
Sbjct: 953  aagaaacaggcaatcgagactctcggttcagtgttcttcgccaccactctatgctccaca 894

               
Query: 361  ctc 363
            |||
Sbjct: 893  ctc 891



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 100/123 (81%)
 Strand = Plus / Minus

                                                                           
Query: 241     gacaacaactccttgatggggccgtacaccctcgtcgaggctggatggaaatgcgtgctg 300
               ||||||| ||||||||| ||||| |||| |||||| ||    ||||| ||||| ||||||
Sbjct: 5557156 gacaacagctccttgatcgggccatacatcctcgtggaaatcggatgaaaatgggtgctg 5557097

                                                                           
Query: 301     aagaagaacgcgatcgagaccctcggagcagcgttctttgccaacaccctatgttccaca 360
               |||||  | || |||||||| |||||  ||| |||||| |||| ||| ||||| ||||||
Sbjct: 5557096 aagaaacaggcaatcgagactctcggttcagtgttcttcgccaccactctatgctccaca 5557037

                  
Query: 361     ctc 363
               |||
Sbjct: 5557036 ctc 5557034



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>dbj|AK067970.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124E20, full
            insert sequence
          Length = 1387

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 100/123 (81%)
 Strand = Plus / Minus

                                                                        
Query: 241  gacaacaactccttgatggggccgtacaccctcgtcgaggctggatggaaatgcgtgctg 300
            ||||||| ||||||||| ||||| |||| |||||| ||    ||||| ||||| ||||||
Sbjct: 1023 gacaacagctccttgatcgggccatacatcctcgtggaaatcggatgaaaatgggtgctg 964

                                                                        
Query: 301  aagaagaacgcgatcgagaccctcggagcagcgttctttgccaacaccctatgttccaca 360
            |||||  | || |||||||| |||||  ||| |||||| |||| ||| ||||| ||||||
Sbjct: 963  aagaaacaggcaatcgagactctcggttcagtgttcttcgccaccactctatgctccaca 904

               
Query: 361  ctc 363
            |||
Sbjct: 903  ctc 901



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>emb|AL662994.3|OSJN00192 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0006L01,
             complete sequence
          Length = 162227

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 100/123 (81%)
 Strand = Plus / Minus

                                                                         
Query: 241   gacaacaactccttgatggggccgtacaccctcgtcgaggctggatggaaatgcgtgctg 300
             ||||||| ||||||||| ||||| |||| |||||| ||    ||||| ||||| ||||||
Sbjct: 14363 gacaacagctccttgatcgggccatacatcctcgtggaaatcggatgaaaatgggtgctg 14304

                                                                         
Query: 301   aagaagaacgcgatcgagaccctcggagcagcgttctttgccaacaccctatgttccaca 360
             |||||  | || |||||||| |||||  ||| |||||| |||| ||| ||||| ||||||
Sbjct: 14303 aagaaacaggcaatcgagactctcggttcagtgttcttcgccaccactctatgctccaca 14244

                
Query: 361   ctc 363
             |||
Sbjct: 14243 ctc 14241



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>emb|AL662934.3|OSJN00136 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027O01,
              complete sequence
          Length = 150283

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 100/123 (81%)
 Strand = Plus / Minus

                                                                          
Query: 241    gacaacaactccttgatggggccgtacaccctcgtcgaggctggatggaaatgcgtgctg 300
              ||||||| ||||||||| ||||| |||| |||||| ||    ||||| ||||| ||||||
Sbjct: 111786 gacaacagctccttgatcgggccatacatcctcgtggaaatcggatgaaaatgggtgctg 111727

                                                                          
Query: 301    aagaagaacgcgatcgagaccctcggagcagcgttctttgccaacaccctatgttccaca 360
              |||||  | || |||||||| |||||  ||| |||||| |||| ||| ||||| ||||||
Sbjct: 111726 aagaaacaggcaatcgagactctcggttcagtgttcttcgccaccactctatgctccaca 111667

                 
Query: 361    ctc 363
              |||
Sbjct: 111666 ctc 111664



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>gb|AY110514.1| Zea mays CL948_1 mRNA sequence
          Length = 1344

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 180/233 (77%)
 Strand = Plus / Minus

                                                                        
Query: 199  tctctcacgagggtttccctatacaatggtatgttcttgtcggacaacaactccttgatg 258
            ||||||||||| |||||||||||||| ||   |||||  ||||||| || ||||||||| 
Sbjct: 1042 tctctcacgagtgtttccctatacaaaggagggttctcctcggacagcagctccttgatt 983

                                                                        
Query: 259  gggccgtacaccctcgtcgaggctggatggaaatgcgtgctgaagaagaacgcgatcgag 318
            |||    ||   || ||||| || ||||||||||| ||||||     | |||||||||| 
Sbjct: 982  ggggnnnacgttcttgtcgaagcgggatggaaatgggtgctgnnnnngcacgcgatcgaa 923

                                                                        
Query: 319  accctcggagcagcgttctttgccaacaccctatgttccacactcctgaacccatcgttg 378
            || || ||  |||| ||||| || | |||||| || || || || ||||||   ||||| 
Sbjct: 922  actcttggttcagcattcttggctaccaccctgtgctcgacgctgctgaacttgtcgtta 863

                                                                 
Query: 379  gagatcagctgtaagagatcgccgacgttcacaatgaatgctccgggtgtcgg 431
            |||| |||||| ||||||||||| | ||| || ||||||||||| || |||||
Sbjct: 862  gagaccagctgcaagagatcgcctatgttgacgatgaatgctccaggcgtcgg 810



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>gb|AC136842.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0085C16, complete sequence
          Length = 156069

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 115    attcacaaatcacaaattcat 135
              |||||||||||||||||||||
Sbjct: 141434 attcacaaatcacaaattcat 141454



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>gb|AC148171.16| Medicago truncatula clone mth2-30a2, complete sequence
          Length = 158384

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 110   ctcttattcacaaatcacaaattca 134
             |||| ||||||||||||||||||||
Sbjct: 71175 ctctaattcacaaatcacaaattca 71151



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>gb|AC118347.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0043E10, complete sequence
          Length = 124591

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 115   attcacaaatcacaaattcat 135
             |||||||||||||||||||||
Sbjct: 91230 attcacaaatcacaaattcat 91210



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 115      attcacaaatcacaaattcat 135
                |||||||||||||||||||||
Sbjct: 22103438 attcacaaatcacaaattcat 22103458



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 115      attcacaaatcacaaattcat 135
                |||||||||||||||||||||
Sbjct: 21997960 attcacaaatcacaaattcat 21997980



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>dbj|AP003413.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:B1151A10
          Length = 124344

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 115  attcacaaatcacaaattcat 135
            |||||||||||||||||||||
Sbjct: 9473 attcacaaatcacaaattcat 9493



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>dbj|AP003308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1129G05
          Length = 132535

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 115   attcacaaatcacaaattcat 135
             |||||||||||||||||||||
Sbjct: 79768 attcacaaatcacaaattcat 79788



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>gb|AC141896.5| Mus musculus BAC clone RP23-238B2 from 5, complete sequence
          Length = 240890

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 118   cacaaatcacaaattcataac 138
             |||||||||||||||||||||
Sbjct: 99350 cacaaatcacaaattcataac 99370



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>emb|CT573055.2| Medicago truncatula chromosome 5 clone mth2-75o19, COMPLETE SEQUENCE
          Length = 121343

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 110   ctcttattcacaaatcacaaattca 134
             |||| ||||||||||||||||||||
Sbjct: 87114 ctctaattcacaaatcacaaattca 87138



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 115      attcacaaatcacaaattcat 135
                |||||||||||||||||||||
Sbjct: 22413385 attcacaaatcacaaattcat 22413405



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>emb|AL139111.20| Human DNA sequence from clone RP13-46G5 on chromosome Xq13.1-13.3
             Contains the 3' end of the IGBP1 gene for immunoglobulin
             (CD79A) binding protein 1, the 5' end of the gene for a
             novel protein similar to diacyglycerol O-acyltransferase
             homolog 2 (mouse) (DGAT2) and two novel genes, complete
             sequence
          Length = 53945

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 117   tcacaaatcacaaattcataa 137
             |||||||||||||||||||||
Sbjct: 16654 tcacaaatcacaaattcataa 16674



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>gb|AC154034.1| Medicago truncatula chromosome 7 BAC clone mth2-71n23, complete
             sequence
          Length = 125195

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 115   attcacaaatcacaaattcataac 138
             ||||||||| ||||||||||||||
Sbjct: 33767 attcacaaaacacaaattcataac 33744



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>emb|CR450841.7| Zebrafish DNA sequence from clone DKEY-16N9 in linkage group 11,
             complete sequence
          Length = 263287

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    attttattatccatttcata 39
             ||||||||||||||||||||
Sbjct: 67941 attttattatccatttcata 67960



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>ref|XM_387306.1| Gibberella zeae PH-1 chromosome 4 predicted protein (FG07130.1)
           partial mRNA
          Length = 639

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 248 actccttgatggggccgtac 267
           ||||||||||||||||||||
Sbjct: 295 actccttgatggggccgtac 276



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>gb|AC007528.5| Homo sapiens 12 BAC RP11-473N11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 188451

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    ttcacaaatcacaaattcat 135
              ||||||||||||||||||||
Sbjct: 172838 ttcacaaatcacaaattcat 172819



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>ref|XM_722035.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY06471)
           partial mRNA
          Length = 780

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 17  gtaattttattatccatttc 36
           ||||||||||||||||||||
Sbjct: 380 gtaattttattatccatttc 361



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>ref|XM_670009.1| Plasmodium berghei strain ANKA Pb-reticulocyte binding protein
           (PB000872.03.0) partial mRNA
          Length = 903

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 17  gtaattttattatccatttc 36
           ||||||||||||||||||||
Sbjct: 449 gtaattttattatccatttc 430



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>emb|AL157812.5| Human DNA sequence from clone RP11-14B2 on chromosome 13q21.1-21.3
             Contains GSSs and STSs, complete sequence
          Length = 166971

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 109   actcttattcacaaatcacaaatt 132
             ||||||||||||||| ||||||||
Sbjct: 68368 actcttattcacaaaccacaaatt 68345



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>gb|AC106914.5| Rattus norvegicus  BAC CH230-12M19 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 235005

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 118    cacaaatcacaaattcataa 137
              ||||||||||||||||||||
Sbjct: 194454 cacaaatcacaaattcataa 194473



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>gb|AC114975.2| Homo sapiens chromosome 5 clone RP11-484L7, complete sequence
          Length = 197363

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    taattttattatccatttca 37
             ||||||||||||||||||||
Sbjct: 73888 taattttattatccatttca 73907



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 115     attcacaaatcacaaattca 134
               ||||||||||||||||||||
Sbjct: 9504473 attcacaaatcacaaattca 9504454



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 115      attcacaaatcacaaattca 134
                ||||||||||||||||||||
Sbjct: 10166430 attcacaaatcacaaattca 10166449



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>dbj|AP003538.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0059O19
          Length = 144386

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   attcacaaatcacaaattca 134
             ||||||||||||||||||||
Sbjct: 92095 attcacaaatcacaaattca 92076



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>dbj|AP005536.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0055M07
          Length = 150901

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 115   attcacaaatcacaaattca 134
             ||||||||||||||||||||
Sbjct: 38796 attcacaaatcacaaattca 38815



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>dbj|AP004770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0017G06
          Length = 150628

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 115    attcacaaatcacaaattca 134
              ||||||||||||||||||||
Sbjct: 114124 attcacaaatcacaaattca 114143



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>gb|AF139500.1|AF139500 Prunus armeniaca p69RF mRNA, partial cds
          Length = 1280

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 337 tttgccaacaccctatgttccacactcctgaa 368
           |||||||| ||||| ||||| |||||||||||
Sbjct: 913 tttgccaataccctgtgttctacactcctgaa 882



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>gb|AC006141.2|AC006141 Homo sapiens chromosome 17, clone hRPK.421_E_14, complete sequence
          Length = 121132

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    taattttattatccatttca 37
             ||||||||||||||||||||
Sbjct: 70559 taattttattatccatttca 70578



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>emb|AL132640.4|CNS01DT5 Human chromosome 14 DNA sequence BAC R-643G16 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 177688

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    gtaattttattatccatttc 36
             ||||||||||||||||||||
Sbjct: 41780 gtaattttattatccatttc 41799



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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 283    ggatggaaatgcgtgctgaagaagaacg 310
              |||||||| ||||||| |||||||||||
Sbjct: 961041 ggatggaactgcgtgccgaagaagaacg 961014



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>emb|AJ278826.1|PBE278826 Plasmodium berghei OMPDC gene, ORF1 to ORF5 DNA with alternative
            splice sites
          Length = 13629

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 17   gtaattttattatccatttc 36
            ||||||||||||||||||||
Sbjct: 6148 gtaattttattatccatttc 6167


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,639,073
Number of Sequences: 3902068
Number of extensions: 3639073
Number of successful extensions: 61640
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 61434
Number of HSP's gapped (non-prelim): 205
length of query: 451
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 429
effective length of database: 17,147,199,772
effective search space: 7356148702188
effective search space used: 7356148702188
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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