Clone Name | rbart55b02 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK104112.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-G09, full insert sequence Length = 1019 Score = 182 bits (92), Expect = 8e-43 Identities = 128/140 (91%) Strand = Plus / Minus Query: 391 aatacctcctcattgcagactgggcatgccttgttaatcttaagccagcgagttatgcaa 450 |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 634 aatacctcctcattgcagactgggcatgccttattgatcttaagccagcgagttatgcaa 575 Query: 451 cctgcatggtaacaatggctgcagggcagccttatcaacttctctcggcttttatagttc 510 ||||||||||||| ||||||||||||| |||||||| |||| |||||||||||| || Sbjct: 574 tctgcatggtaacagtggctgcagggcaatcttatcaatttctgtcggcttttataagtc 515 Query: 511 gatttgcagatcacgcattc 530 ||||| |||||||| ||||| Sbjct: 514 gatttacagatcacacattc 495
>dbj|AK066238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059J01, full insert sequence Length = 1199 Score = 182 bits (92), Expect = 8e-43 Identities = 128/140 (91%) Strand = Plus / Minus Query: 391 aatacctcctcattgcagactgggcatgccttgttaatcttaagccagcgagttatgcaa 450 |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 648 aatacctcctcattgcagactgggcatgccttattgatcttaagccagcgagttatgcaa 589 Query: 451 cctgcatggtaacaatggctgcagggcagccttatcaacttctctcggcttttatagttc 510 ||||||||||||| ||||||||||||| |||||||| |||| |||||||||||| || Sbjct: 588 tctgcatggtaacagtggctgcagggcaatcttatcaatttctgtcggcttttataagtc 529 Query: 511 gatttgcagatcacgcattc 530 ||||| |||||||| ||||| Sbjct: 528 gatttacagatcacacattc 509
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 123 bits (62), Expect = 6e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 427 atcttaagccagcgagttatgcaacctgcatggtaacaatggctgcagggcagccttatc 486 |||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||| Sbjct: 20228118 atcttaagccagcgagttatgcaatctgcatggtaacagtggctgcagggcaatcttatc 20228177 Query: 487 aacttctctcggcttttatagttcgatttgcagatcac 524 || |||| |||||||||||| ||||||| |||||||| Sbjct: 20228178 aatttctgtcggcttttataagtcgatttacagatcac 20228215 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 391 aatacctcctcattgcagactgggcatgcct 421 ||||||||||||||||||||||||||||||| Sbjct: 20227806 aatacctcctcattgcagactgggcatgcct 20227836
>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1439_F07 Length = 153743 Score = 123 bits (62), Expect = 6e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 427 atcttaagccagcgagttatgcaacctgcatggtaacaatggctgcagggcagccttatc 486 |||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||| Sbjct: 7245 atcttaagccagcgagttatgcaatctgcatggtaacagtggctgcagggcaatcttatc 7304 Query: 487 aacttctctcggcttttatagttcgatttgcagatcac 524 || |||| |||||||||||| ||||||| |||||||| Sbjct: 7305 aatttctgtcggcttttataagtcgatttacagatcac 7342 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 391 aatacctcctcattgcagactgggcatgcct 421 ||||||||||||||||||||||||||||||| Sbjct: 6933 aatacctcctcattgcagactgggcatgcct 6963
>dbj|AP005864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0047P18 Length = 169128 Score = 123 bits (62), Expect = 6e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 427 atcttaagccagcgagttatgcaacctgcatggtaacaatggctgcagggcagccttatc 486 |||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||| Sbjct: 121618 atcttaagccagcgagttatgcaatctgcatggtaacagtggctgcagggcaatcttatc 121677 Query: 487 aacttctctcggcttttatagttcgatttgcagatcac 524 || |||| |||||||||||| ||||||| |||||||| Sbjct: 121678 aatttctgtcggcttttataagtcgatttacagatcac 121715 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 391 aatacctcctcattgcagactgggcatgcct 421 ||||||||||||||||||||||||||||||| Sbjct: 121306 aatacctcctcattgcagactgggcatgcct 121336
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 117 bits (59), Expect = 4e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 419 ccttgttaatcttaagccagcgagttatgcaacctgcatggtaacaatggctgcagggca 478 ||||||| |||||||||||||||||||||||| | ||||||||||| ||||||||||||| Sbjct: 17097398 ccttgttgatcttaagccagcgagttatgcaatccgcatggtaacagtggctgcagggca 17097339 Query: 479 gccttatcaacttctctcggcttttatagttcgatttgcagatcacgcatt 529 |||||||| |||| |||||||||||| ||||||| || ||||| |||| Sbjct: 17097338 atcttatcaatttctgtcggcttttataagtcgatttacatatcacacatt 17097288 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 391 aatacctcctcattgcagactgggcatgcct 421 ||||||||||||||||||||||||||||||| Sbjct: 17097694 aatacctcctcattgcagactgggcatgcct 17097664
>dbj|AP004224.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1111E11 Length = 152835 Score = 117 bits (59), Expect = 4e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 419 ccttgttaatcttaagccagcgagttatgcaacctgcatggtaacaatggctgcagggca 478 ||||||| |||||||||||||||||||||||| | ||||||||||| ||||||||||||| Sbjct: 10354 ccttgttgatcttaagccagcgagttatgcaatccgcatggtaacagtggctgcagggca 10295 Query: 479 gccttatcaacttctctcggcttttatagttcgatttgcagatcacgcatt 529 |||||||| |||| |||||||||||| ||||||| || ||||| |||| Sbjct: 10294 atcttatcaatttctgtcggcttttataagtcgatttacatatcacacatt 10244 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 391 aatacctcctcattgcagactgggcatgcct 421 ||||||||||||||||||||||||||||||| Sbjct: 10650 aatacctcctcattgcagactgggcatgcct 10620
>dbj|AP004723.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1126_G08 Length = 157455 Score = 117 bits (59), Expect = 4e-23 Identities = 98/111 (88%) Strand = Plus / Minus Query: 419 ccttgttaatcttaagccagcgagttatgcaacctgcatggtaacaatggctgcagggca 478 ||||||| |||||||||||||||||||||||| | ||||||||||| ||||||||||||| Sbjct: 94347 ccttgttgatcttaagccagcgagttatgcaatccgcatggtaacagtggctgcagggca 94288 Query: 479 gccttatcaacttctctcggcttttatagttcgatttgcagatcacgcatt 529 |||||||| |||| |||||||||||| ||||||| || ||||| |||| Sbjct: 94287 atcttatcaatttctgtcggcttttataagtcgatttacatatcacacatt 94237 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 391 aatacctcctcattgcagactgggcatgcct 421 ||||||||||||||||||||||||||||||| Sbjct: 94643 aatacctcctcattgcagactgggcatgcct 94613
>gb|AC161283.2| Pan troglodytes BAC clone CH251-354N8 from chromosome 7, complete sequence Length = 160292 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Minus Query: 20 ctatatatgtgtatatataacatttaca 47 ||||||||||||||||||||||| |||| Sbjct: 63103 ctatatatgtgtatatataacatataca 63076
>gb|AC004015.1| Homo sapiens BAC clone CTA-333F24 from 7, complete sequence Length = 144239 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Minus Query: 20 ctatatatgtgtatatataacatttaca 47 ||||||||||||||||||||||| |||| Sbjct: 141797 ctatatatgtgtatatataacatataca 141770
>emb|AL391865.9| Human DNA sequence from clone RP13-40J16 on chromosome X, complete sequence Length = 151421 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataacattt 44 |||||||||||||||||||||||| Sbjct: 1317 tatatatgtgtatatataacattt 1294
>gb|AY020881.1| Oryza sativa microsatellite MRG3206 containing (TA)X15, genomic sequence Length = 230 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 16 tgtcctatatatgtgtatatata 38 ||||||||||||||||||||||| Sbjct: 211 tgtcctatatatgtgtatatata 189
>gb|AC055739.23| Homo sapiens 3 BAC RP11-197K3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 136000 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 21 tatatatgtgtatatataacatttacaatct 51 ||||||| ||||||||||||||||| ||||| Sbjct: 14882 tatatatatgtatatataacatttaaaatct 14912
>ref|XM_691060.1| PREDICTED: Danio rerio similar to LOC395027 protein (LOC567758), mRNA Length = 1869 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 85 gagggtgcaatacttgacaaacc 107 ||||||||||||||||||||||| Sbjct: 1012 gagggtgcaatacttgacaaacc 1034
>ref|XM_701301.1| PREDICTED: Danio rerio hypothetical protein LOC566829 (LOC566829), mRNA Length = 2001 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 85 gagggtgcaatacttgacaaacc 107 ||||||||||||||||||||||| Sbjct: 1144 gagggtgcaatacttgacaaacc 1166
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 16 tgtcctatatatgtgtatatata 38 ||||||||||||||||||||||| Sbjct: 27984238 tgtcctatatatgtgtatatata 27984260
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 16 tgtcctatatatgtgtatatata 38 ||||||||||||||||||||||| Sbjct: 147596 tgtcctatatatgtgtatatata 147618
>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1343_D04 Length = 143407 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 16 tgtcctatatatgtgtatatata 38 ||||||||||||||||||||||| Sbjct: 73572 tgtcctatatatgtgtatatata 73594
>ref|NG_002690.1| Homo sapiens Prader-Willi/Angelman syndrome region (PWSAS@) on chromosome 15 Length = 755217 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 tatatatgtgtatatataacat 42 |||||||||||||||||||||| Sbjct: 137606 tatatatgtgtatatataacat 137627 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 tatatatgtgtatatataacat 42 |||||||||||||||||||||| Sbjct: 137502 tatatatgtgtatatataacat 137523
>gb|AC147028.3| Pan troglodytes BAC clone RP43-93F8 from 7, complete sequence Length = 170936 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 tatatatgtgtatatataacat 42 |||||||||||||||||||||| Sbjct: 122412 tatatatgtgtatatataacat 122433
>gb|AC146263.2| Pan troglodytes BAC clone RP43-28O1 from 7, complete sequence Length = 141252 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataacat 42 |||||||||||||||||||||| Sbjct: 95970 tatatatgtgtatatataacat 95949
>gb|AC102127.11| Mus musculus chromosome 1, clone RP23-202A19, complete sequence Length = 196674 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 tgtcctatatatgtgtatatat 37 |||||||||||||||||||||| Sbjct: 167253 tgtcctatatatgtgtatatat 167274
>gb|AC073221.9| Homo sapiens BAC clone RP11-543D8 from 7, complete sequence Length = 94027 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 tatatatgtgtatatataacat 42 |||||||||||||||||||||| Sbjct: 14079 tatatatgtgtatatataacat 14100
>gb|AC113107.15| Mus musculus chromosome 10, clone RP23-325G13, complete sequence Length = 207239 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataacat 42 |||||||||||||||||||||| Sbjct: 147037 tatatatgtgtatatataacat 147016
>gb|AC004848.1| Homo sapiens PAC clone RP4-649P17 from 7, complete sequence Length = 135214 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataacat 42 |||||||||||||||||||||| Sbjct: 22413 tatatatgtgtatatataacat 22392
>gb|AC013285.10| Homo sapiens chromosome 10 clone RP11-143D9, complete sequence Length = 202500 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataacat 42 |||||||||||||||||||||| Sbjct: 47370 tatatatgtgtatatataacat 47349
>emb|AL365192.22| Human DNA sequence from clone RP3-421H19 on chromosome 6 Contains the 5' part of a novel protein similar to ribosomal protein L14 (L14p/L23e), a novel gene, the CAPN11 gene for calpain 11 and one CpG island, complete sequence Length = 89351 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 tatatatgtgtatatataacat 42 |||||||||||||||||||||| Sbjct: 71419 tatatatgtgtatatataacat 71440
>emb|AL162412.11| Human DNA sequence from clone RP11-109D9 on chromosome 9 Contains the 5' end of the APBA1 gene for myloid beta (A4) precursor protein-binding, family A, member 1 (X11), two novel genes, the 5' end of a novel gene possible ortholog of mouse RIKEN cDNA 1700028P14 gene and two CpG islands, complete sequence Length = 189277 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataacat 42 |||||||||||||||||||||| Sbjct: 63870 tatatatgtgtatatataacat 63849
>emb|AL137183.7| Human DNA sequence from clone RP1-319D23 on chromosome 6, complete sequence Length = 30167 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 tatatatgtgtatatataacat 42 |||||||||||||||||||||| Sbjct: 20822 tatatatgtgtatatataacat 20843
>gb|AC157812.4| Mus musculus chromosome 1, clone RP24-400L13, complete sequence Length = 150328 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 tgtcctatatatgtgtatatat 37 |||||||||||||||||||||| Sbjct: 106690 tgtcctatatatgtgtatatat 106711
>gb|AC061997.12| Homo sapiens chromosome 11, clone RP11-324K6, complete sequence Length = 106216 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 15 atgtcctatatatgtgtatatataac 40 ||||||||||||||||| |||||||| Sbjct: 32458 atgtcctatatatgtgtgtatataac 32433
>gb|AC013738.5| Homo sapiens chromosome 10 clone RP11-530I5, complete sequence Length = 201511 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataacat 42 |||||||||||||||||||||| Sbjct: 197236 tatatatgtgtatatataacat 197215
>gb|AC067743.10| Homo sapiens chromosome 10 clone RP11-441P16, complete sequence Length = 177795 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataacat 42 |||||||||||||||||||||| Sbjct: 156105 tatatatgtgtatatataacat 156084
>gb|AC069549.5| Homo sapiens chromosome 10 clone RP11-575A19, complete sequence Length = 170554 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataacat 42 |||||||||||||||||||||| Sbjct: 16688 tatatatgtgtatatataacat 16667
>gb|AC024580.6| Homo sapiens chromosome 19 clone CTD-2621I17, complete sequence Length = 193609 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 tatatatgtgtatatataacat 42 |||||||||||||||||||||| Sbjct: 19714 tatatatgtgtatatataacat 19735 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 tatatgtgtatatataacat 42 |||||||||||||||||||| Sbjct: 19783 tatatgtgtatatataacat 19764
>gb|AC155940.6| Mus musculus 10 BAC RP24-94O5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 211515 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataacat 42 |||||||||||||||||||||| Sbjct: 35958 tatatatgtgtatatataacat 35937
>gb|AC022209.4|AC022209 Homo sapiens BAC clone RP11-588M21 from 11, complete sequence Length = 177314 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 15 atgtcctatatatgtgtatatataac 40 ||||||||||||||||| |||||||| Sbjct: 448 atgtcctatatatgtgtgtatataac 473
>gb|AC096589.1| Homo sapiens BAC clone RP11-744G10 from 2, complete sequence Length = 157143 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 20 ctatatatgtgtatatataaca 41 |||||||||||||||||||||| Sbjct: 80998 ctatatatgtgtatatataaca 81019
>gb|AC004819.2| Homo sapiens PAC clone RP1-15I23 from 22, complete sequence Length = 59113 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 tatatatgtgtatatataacat 42 |||||||||||||||||||||| Sbjct: 30680 tatatatgtgtatatataacat 30701
>gb|AC090602.16| Homo sapiens chromosome 15, clone RP11-125E1, complete sequence Length = 174707 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 tatatatgtgtatatataacat 42 |||||||||||||||||||||| Sbjct: 137606 tatatatgtgtatatataacat 137627 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 tatatatgtgtatatataacat 42 |||||||||||||||||||||| Sbjct: 137502 tatatatgtgtatatataacat 137523
>gb|AC011470.5|AC011470 Homo sapiens chromosome 19 clone CTC-490M10, complete sequence Length = 157141 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataacat 42 |||||||||||||||||||||| Sbjct: 44554 tatatatgtgtatatataacat 44533
>emb|BX005048.9| Zebrafish DNA sequence from clone CH211-167M1, complete sequence Length = 163525 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 23 tatatgtgtatatataacattt 44 |||||||||||||||||||||| Sbjct: 33751 tatatgtgtatatataacattt 33730
>gb|AC135255.2| Homo sapiens 12 BAC RP11-118B13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 55548 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 22 atatatgtgtatatataacatttaca 47 ||||||||||||||||||||| |||| Sbjct: 15506 atatatgtgtatatataacatataca 15531
>gb|AC153879.1| Mus musculus BAC RP23-264C21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 182252 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 atatatgtgtatatataacat 42 ||||||||||||||||||||| Sbjct: 34775 atatatgtgtatatataacat 34755
>ref|NM_025278.3| Mus musculus guanine nucleotide binding protein (G protein), gamma 12 (Gng12), mRNA Length = 4134 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 catgtcctatatatgtgtatatata 38 |||||| |||||||||||||||||| Sbjct: 2654 catgtcatatatatgtgtatatata 2630
>gb|AC162916.3| Mus musculus BAC clone RP23-395G18 from chromosome 1, complete sequence Length = 224904 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 atatatgtgtatatataacat 42 ||||||||||||||||||||| Sbjct: 78737 atatatgtgtatatataacat 78717
>gb|AC140359.2| Mus musculus BAC clone RP24-240P8 from chromosome 5, complete sequence Length = 167021 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 484 atcaacttctctcggctttta 504 ||||||||||||||||||||| Sbjct: 93136 atcaacttctctcggctttta 93116
>gb|AC127316.3| Mus musculus BAC clone RP23-222G16 from 13, complete sequence Length = 203032 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataaca 41 ||||||||||||||||||||| Sbjct: 114885 tatatatgtgtatatataaca 114865
>gb|AC123957.4| Mus musculus BAC clone RP23-302N2 from 12, complete sequence Length = 206661 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 tatatatgtgtatatataaca 41 ||||||||||||||||||||| Sbjct: 111264 tatatatgtgtatatataaca 111284
>gb|AC116178.4| Mus musculus BAC clone RP23-28O18 from 14, complete sequence Length = 195306 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 aaatacattttttcttaaagc 263 ||||||||||||||||||||| Sbjct: 180535 aaatacattttttcttaaagc 180555
>gb|AC122045.3| Mus musculus BAC clone RP24-449H18 from 5, complete sequence Length = 142673 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 484 atcaacttctctcggctttta 504 ||||||||||||||||||||| Sbjct: 115095 atcaacttctctcggctttta 115075
>gb|AC165355.3| Mus musculus BAC clone RP23-129P10 from chromosome 6, complete sequence Length = 199100 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 catgtcctatatatgtgtatatata 38 |||||| |||||||||||||||||| Sbjct: 102229 catgtcatatatatgtgtatatata 102205
>gb|AC163681.3| Mus musculus BAC clone RP24-113I15 from chromosome 14, complete sequence Length = 192183 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 aaatacattttttcttaaagc 263 ||||||||||||||||||||| Sbjct: 42497 aaatacattttttcttaaagc 42517
>gb|U50300.1| Caenorhabditis elegans cosmid R03H4, complete sequence Length = 24384 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 acatatttatcatcattttaa 200 ||||||||||||||||||||| Sbjct: 5680 acatatttatcatcattttaa 5700
>gb|AC090498.4| Homo sapiens chromosome 7 clone RP11-84E17, complete sequence Length = 188036 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataacattta 45 ||||||||||||||||||| ||||| Sbjct: 40599 tatatatgtgtatatataatattta 40575
>emb|AL121583.25|HSBA358N2 Human DNA sequence from clone RP11-358N2 on chromosome 20 Contains the 5' end of the ASXL1 gene for additional sex combs like 1 (Drosophila) and a CpG island, complete sequence Length = 84710 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 14 catgtcctatatatgtgtatatata 38 |||||| |||||||||||||||||| Sbjct: 23368 catgtcttatatatgtgtatatata 23392
>emb|AL079338.16|HSJ841K13 Human DNA sequence from clone RP5-841K13 on chromosome 20 Contains part of the gene for a novel protein (LOC284776), complete sequence Length = 122466 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 23 tatatgtgtatatataacatttaca 47 ||||| ||||||||||||||||||| Sbjct: 94840 tatatatgtatatataacatttaca 94864
>emb|AL034559.4|PFMAL3P7 Plasmodium falciparum MAL3P7, complete sequence Length = 253305 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataaca 41 ||||||||||||||||||||| Sbjct: 19736 tatatatgtgtatatataaca 19716
>emb|BX294162.23| Zebrafish DNA sequence from clone CH211-270C5 in linkage group 10, complete sequence Length = 150791 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 tcctatatatgtgtatatata 38 ||||||||||||||||||||| Sbjct: 150045 tcctatatatgtgtatatata 150025
>emb|AL935275.7| Mouse DNA sequence from clone RP23-44F9 on chromosome 11, complete sequence Length = 129328 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 atatatgtgtatatataacat 42 ||||||||||||||||||||| Sbjct: 37525 atatatgtgtatatataacat 37505
>emb|BX649535.7| Zebrafish DNA sequence from clone DKEY-234E12 in linkage group 3, complete sequence Length = 151079 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 183 tatttatcatcattttaatgacaaa 207 ||||||||| ||||||||||||||| Sbjct: 57829 tatttatcaacattttaatgacaaa 57853
>gb|AC114322.2| Homo sapiens chromosome 5 clone RP11-74D3, complete sequence Length = 133348 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 catatttatcatcattttaat 201 ||||||||||||||||||||| Sbjct: 46092 catatttatcatcattttaat 46072
>gb|AC182540.3| Ateles geoffroyi clone UC1-338I2, complete sequence Length = 178244 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 atatatgtgtatatataacat 42 ||||||||||||||||||||| Sbjct: 173471 atatatgtgtatatataacat 173491
>dbj|AK159872.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420036C06 product:guanine nucleotide binding protein (G protein), gamma 12, full insert sequence Length = 4134 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 catgtcctatatatgtgtatatata 38 |||||| |||||||||||||||||| Sbjct: 2654 catgtcatatatatgtgtatatata 2630
>gb|AC147845.3| Saimiri boliviensis boliviensis clone CH254-335K11, complete sequence Length = 222317 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 atatatgtgtatatataacat 42 ||||||||||||||||||||| Sbjct: 38983 atatatgtgtatatataacat 39003
>dbj|AK079641.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330093G21 product:hypothetical Cytochrome c family heme-binding site containing protein, full insert sequence Length = 1635 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 catgtcctatatatgtgtatatata 38 |||||| |||||||||||||||||| Sbjct: 99 catgtcatatatatgtgtatatata 75
>dbj|AK033422.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched library, clone:9030022E16 product:guanine nucleotide binding protein (G protein), gamma 12, full insert sequence Length = 3435 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 catgtcctatatatgtgtatatata 38 |||||| |||||||||||||||||| Sbjct: 2571 catgtcatatatatgtgtatatata 2547
>gb|AC159468.4| Mus musculus 10 BAC RP23-335A3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 214532 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 atatatgtgtatatataacat 42 ||||||||||||||||||||| Sbjct: 73681 atatatgtgtatatataacat 73701
>gb|AC013246.13|AC013246 Homo sapiens 12 BAC RP11-997P16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161822 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataacattta 45 ||||| ||||||||||||||||||| Sbjct: 79345 tatatttgtgtatatataacattta 79321
>gb|BC025634.1| Mus musculus, clone IMAGE:5321534, mRNA Length = 2830 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 catgtcctatatatgtgtatatata 38 |||||| |||||||||||||||||| Sbjct: 1329 catgtcatatatatgtgtatatata 1305
>gb|AC106719.4| Homo sapiens 3p BAC RP11-12J13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154652 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 atgtcctatatatgtgtatatataa 39 ||||| ||||||||||||||||||| Sbjct: 147978 atgtcatatatatgtgtatatataa 147954
>gb|AC135377.3| Mus musculus BAC clone RP24-66B2 from chromosome 19, complete sequence Length = 179745 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 atatatgtgtatatataacat 42 ||||||||||||||||||||| Sbjct: 135172 atatatgtgtatatataacat 135192
>gb|AC003013.1|AC003013 Human PAC clone RP1-205E24 from Xq23, complete sequence Length = 173452 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataacattta 45 ||||||||||||||||||| ||||| Sbjct: 79168 tatatatgtgtatatataatattta 79144
>gb|AC107650.19| Mus musculus chromosome 6, clone RP23-133I9, complete sequence Length = 225883 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 14 catgtcctatatatgtgtatatata 38 |||||| |||||||||||||||||| Sbjct: 16494 catgtcatatatatgtgtatatata 16518
>gb|AC006198.1|AC006198 Homo sapiens, clone hRPK.3_A_1, complete sequence Length = 163410 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 tatatgtgtatatataacatttaca 47 ||||| ||||||||||||||||||| Sbjct: 25811 tatatatgtatatataacatttaca 25787
>emb|AL591973.1| Listeria monocytogenes strain EGD, complete genome, segment 1/12 Length = 200050 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 486 caacttctctcggcttttatagttcgatt 514 |||||||| |||| ||||||||||||||| Sbjct: 108312 caacttctttcggattttatagttcgatt 108284
>gb|AC005181.1|AC005181 Homo sapiens chromosome 17, clone hRPK.1003_J_3, complete sequence Length = 202763 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 tcctatatatgtgtatatata 38 ||||||||||||||||||||| Sbjct: 146752 tcctatatatgtgtatatata 146732
>emb|AL136101.7| Human DNA sequence from clone RP5-954O23 on chromosome Xq22.2-23, complete sequence Length = 124281 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataacattta 45 ||||||||||||||||||| ||||| Sbjct: 47072 tatatatgtgtatatataatattta 47048
>gb|AC101992.11| Mus musculus chromosome 3, clone RP24-377J3, complete sequence Length = 191967 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 atatatgtgtatatataacat 42 ||||||||||||||||||||| Sbjct: 113270 atatatgtgtatatataacat 113290
>ref|NM_123128.2| Arabidopsis thaliana hydrolase, acting on ester bonds / lipase AT5G37690 mRNA, complete cds Length = 1382 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 atatatgtgtatatataaca 41 |||||||||||||||||||| Sbjct: 1325 atatatgtgtatatataaca 1306
>gb|AC170875.2| Mus musculus BAC clone RP24-266D3 from chromosome 3, complete sequence Length = 155248 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 atatatgtgtatatataacattta 45 ||||||||||| |||||||||||| Sbjct: 89191 atatatgtgtaaatataacattta 89168
>gb|AC166836.3| Mus musculus BAC clone RP23-17O23 from chromosome 10, complete sequence Length = 202804 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 atatatgtgtatatataacattta 45 |||||| ||||||||||||||||| Sbjct: 28466 atatatatgtatatataacattta 28443
>gb|AE001388.1| Plasmodium falciparum 3D7 chromosome 2 section 25 of 73 of the complete sequence Length = 14135 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 tatatatgtgtatatataacattt 44 ||||||| |||||||||||||||| Sbjct: 13473 tatatatatgtatatataacattt 13496
>gb|AC115723.13| Mus musculus chromosome 5, clone RP23-17D18, complete sequence Length = 206470 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 tatatgtgtatatataacat 42 |||||||||||||||||||| Sbjct: 172307 tatatgtgtatatataacat 172288
>gb|AC149132.1| Pan troglodytes chromosome X clone PTB-099J01 map human ortholog p22.12 complete sequence Length = 215862 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 tttatcatcattttaatgac 204 |||||||||||||||||||| Sbjct: 167273 tttatcatcattttaatgac 167254
>gb|AC104716.4| Homo sapiens chromosome 8 clone RP11-81A21 map q24.13, complete sequence Length = 147651 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 100232 cctatatatgtgtatatata 100251
>gb|AF216671.7| Homo sapiens chromosome 8 clone RP11-300I14 map q24.13, complete sequence Length = 183027 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 77844 cctatatatgtgtatatata 77863
>gb|AC133331.3| Homo sapiens chromosome 8 clone RP11-156O22 map q24.13, complete sequence Length = 174972 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 62317 cctatatatgtgtatatata 62336
>gb|AC121589.3| Mus musculus BAC clone RP23-281G14 from chromosome 3, complete sequence Length = 215395 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 atatatgtgtatatataacattta 45 |||||||||||||||||| ||||| Sbjct: 2660 atatatgtgtatatataatattta 2637
>gb|AC131759.3| Mus musculus BAC clone RP24-212D8 from chromosome 12, complete sequence Length = 166128 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataac 40 |||||||||||||||||||| Sbjct: 162039 tatatatgtgtatatataac 162020
>gb|AC121959.3| Mus musculus BAC clone RP24-247N18 from chromosome 3, complete sequence Length = 187416 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 atatatgtgtatatataacattta 45 |||||||||||||||||| ||||| Sbjct: 32595 atatatgtgtatatataatattta 32618
>gb|AC129299.3| Mus musculus BAC clone RP24-420E16 from chromosome 14, complete sequence Length = 156372 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 atatatgtgtatatataaca 41 |||||||||||||||||||| Sbjct: 51012 atatatgtgtatatataaca 51031
>emb|Z81534.1|CEF37H8 Caenorhabditis elegans Cosmid F37H8, complete sequence Length = 38908 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 agaaaatgcatgtcctatat 25 |||||||||||||||||||| Sbjct: 7800 agaaaatgcatgtcctatat 7781
>gb|AE014302.1| Homo sapiens chromosome 13q34 schizophrenia region contig 2 section 2 of 3 of the complete sequence Length = 277196 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 162781 cctatatatgtgtatatata 162762
>gb|AC122216.4| Mus musculus BAC clone RP23-118H9 from 5, complete sequence Length = 196273 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 tatatgtgtatatataacat 42 |||||||||||||||||||| Sbjct: 25257 tatatgtgtatatataacat 25238
>gb|AC130817.4| Mus musculus BAC clone RP23-68J13 from 16, complete sequence Length = 193917 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 164800 cctatatatgtgtatatata 164819
>ref|XM_671691.1| Plasmodium berghei strain ANKA hypothetical protein (PB102947.00.0) partial mRNA Length = 216 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataacattt 44 ||||| |||||||||||||||||| Sbjct: 211 tatatgtgtgtatatataacattt 188
>gb|AC102031.7| Mus musculus chromosome 3, clone RP23-14C8, complete sequence Length = 181179 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 atatatgtgtatatataacattta 45 ||||||||||| |||||||||||| Sbjct: 176447 atatatgtgtaaatataacattta 176470
>gb|AC102821.3| Mus musculus chromosome 3, clone RP24-179A5, complete sequence Length = 155793 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 atatatgtgtatatataaca 41 |||||||||||||||||||| Sbjct: 66505 atatatgtgtatatataaca 66486
>gb|AC142311.1| Pan troglodytes BAC clone RP43-47I3 from 7, complete sequence Length = 166861 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 tatatatgtgtatatataacattt 44 ||||||||||||||||||| |||| Sbjct: 39657 tatatatgtgtatatataatattt 39680
>gb|AC102633.7| Mus musculus chromosome 15, clone RP23-326O18, complete sequence Length = 225738 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 atatatgtgtatatataaca 41 |||||||||||||||||||| Sbjct: 130834 atatatgtgtatatataaca 130853
>emb|AL807772.12| Human DNA sequence from clone RP11-188G3 on chromosome X Contains the 5' end of the RPS6KA3 gene for ribosomal protein S6 kinase, 90kDa, polypeptide 3 (RSK, HU-2, HU-3, RSK2, MRX19, ISPK-1, MAPKAPK1B) and a CpG island, complete sequence Length = 129996 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 tttatcatcattttaatgac 204 |||||||||||||||||||| Sbjct: 77015 tttatcatcattttaatgac 76996
>emb|AL606535.11| Human DNA sequence from clone RP11-438I12 on chromosome 1 Contains a keratin 8 (KRT8) pseudogene, complete sequence Length = 119814 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ctatatatgtgtatatataa 39 |||||||||||||||||||| Sbjct: 39486 ctatatatgtgtatatataa 39505
>emb|AL590394.7| Human DNA sequence from clone RP11-435I7 on chromosome X Contains part of the gene for a novel protein (FLJ31204), complete sequence Length = 62195 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 atgtcctatatatgtgtatatata 38 |||| ||||||||||||||||||| Sbjct: 16278 atgtactatatatgtgtatatata 16301
>emb|AL512410.14| Human DNA sequence from clone RP11-100E6 on chromosome 6, complete sequence Length = 160891 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 41073 cctatatatgtgtatatata 41054
>emb|AL451048.13| Human DNA sequence from clone RP11-298A8 on chromosome Xq26.3-27.3 Contains the gene for a novel protein similar to SPANX family member B1 (SPANXB1) and a novel gene, complete sequence Length = 99793 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 atgtcctatatatgtgtatatata 38 |||||||| ||||||||||||||| Sbjct: 73457 atgtcctacatatgtgtatatata 73434
>emb|AL512644.10| Human DNA sequence from clone RP11-726B11 on chromosome 9, complete sequence Length = 143919 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataacattt 44 ||||||||||||||||| |||||| Sbjct: 99584 tatatatgtgtatatattacattt 99561
>emb|AL512504.9| Human DNA sequence from clone RP11-325E14 on chromosome X Contains a heterogeneous nuclear ribonucleoprotein H3 (2H9) (HNRPH3) pseudogene, a WW domain binding protein 11 (WBP11) pseudogene, a hexokinase 2 (HK2) pseudogene, a proteasome (prosome, macropain) subunit, alpha type, 1 (PSMA1) pseudogene, the 3' end of the gene for a novel WD repeat domain protein and three CpG islands, complete sequence Length = 223078 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 200289 cctatatatgtgtatatata 200270
>emb|AL583783.6| Human DNA sequence from clone RP11-75N6 on chromosome 13 Contains a novel gene and a pseudogene similar to part of heat shock 70kDa protein 8 (HSPA8), complete sequence Length = 85606 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tcctatatatgtgtatatat 37 |||||||||||||||||||| Sbjct: 81602 tcctatatatgtgtatatat 81621
>emb|AL583802.5| Human DNA sequence from clone RP11-11J1 on chromosome 9, complete sequence Length = 100226 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ctatatatgtgtatatataa 39 |||||||||||||||||||| Sbjct: 73769 ctatatatgtgtatatataa 73788
>emb|AL445428.5| Human DNA sequence from clone RP11-144C20 on chromosome 1 Contains the 3' end of a novel gene (FLJ25725), the ubiquitin B pseudogene 2 (UBBP2) and the 5' end of a novel gene (IMAGE:5742758), complete sequence Length = 91241 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tatatatgtgtatatataac 40 |||||||||||||||||||| Sbjct: 76638 tatatatgtgtatatataac 76657
>emb|AL354752.11| Human DNA sequence from clone RP11-570O20 on chromosome Xq27.1-27.3, complete sequence Length = 69126 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 tatatgtgtatatataacat 42 |||||||||||||||||||| Sbjct: 41994 tatatgtgtatatataacat 41975
>emb|AL162420.13| Human DNA sequence from clone RP11-380P16 on chromosome 9 Contains the IFNA17 gene for interferon, alpha 17, a interferon, omega 1 (IFNW1) pseudogene,the IFNA14 gene for interferon, alpha 14, the IFNA5 gene for interferon, alpha 5, a novel gene (KIAA1354) (FLJ13568) and 2 interferon pseudogenes, complete sequence Length = 124491 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 tatatgtgtatatataacat 42 |||||||||||||||||||| Sbjct: 98984 tatatgtgtatatataacat 98965
>emb|AL139800.10| Human DNA sequence from clone RP11-219L22 on chromosome 13 Contains part of the ITGBL1 gene for integrin, beta-like 1 (with EGF-like repeat domains), complete sequence Length = 99173 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 36534 cctatatatgtgtatatata 36515
>emb|AL135794.19| Human DNA sequence from clone RP11-324L3 on chromosome 10 Contains a novel gene, a SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily e member 1 (SMARCE1) pseudogene, the 5' end of a novel gene and two CpG islands, complete sequence Length = 89992 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 tatatatgtgtatatataacattt 44 ||||||| |||||||||||||||| Sbjct: 19797 tatatatatgtatatataacattt 19820
>emb|AL138810.10| Human DNA sequence from clone RP1-179L10 on chromosome 11p12-14.1 Contains a gene encoding the dihydroxylipoamide dehydrogenase-binding protein of pyruvate dehydrogenase complex (E3-binding protein), a gene similar to the CGI-29 protein, a CpG island, ESTs, STSs and GSSs, complete sequence Length = 128228 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 126690 cctatatatgtgtatatata 126709
>emb|AL122008.28|HSJ799P18 Human DNA sequence from clone RP4-799P18 on chromosome 1q42.2-43 Contains the 3' end of the SLC35F3 gene for solute carrier family 35 member F3, two novel genes and three CpG islands, complete sequence Length = 144407 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 457 tggtaacaatggctgcagggcagc 480 |||| ||||||||||||||||||| Sbjct: 46023 tggtgacaatggctgcagggcagc 46046
>gb|AC087887.11| Homo sapiens 12 BAC RP11-27M21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 104526 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ctatatatgtgtatatataa 39 |||||||||||||||||||| Sbjct: 99928 ctatatatgtgtatatataa 99909
>gb|AC157926.4| Mus musculus chromosome 3, clone RP24-61J18, complete sequence Length = 231722 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 atatatgtgtatatataaca 41 |||||||||||||||||||| Sbjct: 200709 atatatgtgtatatataaca 200728
>gb|AY303989.1| Sus scrofa breed Taihu MHC class II antigen (SLA-DQB) gene, complete cds Length = 8488 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 5040 cctatatatgtgtatatata 5059
>emb|CR848747.8| Zebrafish DNA sequence from clone DKEYP-77H1 in linkage group 16, complete sequence Length = 182850 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataac 40 |||||||||||||||||||| Sbjct: 128103 tatatatgtgtatatataac 128084
>gb|AC048383.25| Homo sapiens chromosome 15, clone RP11-543G18, complete sequence Length = 192235 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 66446 cctatatatgtgtatatata 66427
>gb|AC018555.5| Homo sapiens chromosome 16 clone RP11-486F10, complete sequence Length = 187844 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 atgtcctatatatgtgtatatata 38 |||| ||||||||||||||||||| Sbjct: 166468 atgtactatatatgtgtatatata 166491
>emb|CR382400.1| Plasmodium falciparum chromosome 6, complete sequence; segment 3/5 Length = 348034 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 atatttatcatcattttaat 201 |||||||||||||||||||| Sbjct: 175355 atatttatcatcattttaat 175336
>emb|AJ298105.1|HSA298105 Homo sapiens PDX1 gene for lipoyl-containing component X, exons 1-11 Length = 128228 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 1539 cctatatatgtgtatatata 1520
>emb|CR937026.1|PT085P01 Pan troglodytes chromosome 11 BAC PTB-085P01, complete sequence Length = 218832 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 tatatgtgtatatataacat 42 |||||||||||||||||||| Sbjct: 85898 tatatgtgtatatataacat 85917
>emb|AL732595.13| Mouse DNA sequence from clone RP23-87I3 on chromosome 11 Contains a novel pseudogene, a RNA binding motif protein (Rbm8) pseudogene, the 5' end of the Acyp2 gene for muscle type acylphosphatase 2 and a CpG island, complete sequence Length = 115716 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 aaaatacattttttcttaaa 261 |||||||||||||||||||| Sbjct: 77104 aaaatacattttttcttaaa 77085
>emb|AL806526.4| Mouse DNA sequence from clone RP23-123F24 on chromosome 11 Contains a novel gene and a ribosomal protein S20 (Rps20) pseudogene, complete sequence Length = 128168 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 119391 cctatatatgtgtatatata 119410
>emb|BX649410.18| Mouse DNA sequence from clone RP23-168C6 on chromosome 4 Contains a ribosomal protein S6 (Rps6) pseudogene and a novel gene, complete sequence Length = 231582 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tcctatatatgtgtatatat 37 |||||||||||||||||||| Sbjct: 64871 tcctatatatgtgtatatat 64852
>gb|AC009908.13| Homo sapiens chromosome 8, clone RP11-6D1, complete sequence Length = 174981 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 62318 cctatatatgtgtatatata 62337
>gb|AC036111.7| Homo sapiens chromosome 2, clone RP11-738O11, complete sequence Length = 184570 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 71688 cctatatatgtgtatatata 71707
>emb|BX649491.10| Zebrafish DNA sequence from clone RP71-39F1 in linkage group 3, complete sequence Length = 92091 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 tcatcattttaatgacaaaa 208 |||||||||||||||||||| Sbjct: 78670 tcatcattttaatgacaaaa 78689
>emb|BX511163.11| Zebrafish DNA sequence from clone DKEY-176N7 in linkage group 20 Contains the 5' end of the dtl gene for denticleless homolog (Drosophila), the dkfzp434b168 gene for DKFZP434B168 protein homolog (human) and two CpG islands, complete sequence Length = 139573 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 atatgtgtatatataacatt 43 |||||||||||||||||||| Sbjct: 15050 atatgtgtatatataacatt 15031
>gb|AE014178.1| Mus musculus piebald deletion region section 6 of 11 of the complete sequence Length = 400029 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 atatatgtgtatatataaca 41 |||||||||||||||||||| Sbjct: 58141 atatatgtgtatatataaca 58160
>gb|AC129027.2| Homo sapiens 12 BAC RP11-23C21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 33108 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataac 40 |||||||||||||||||||| Sbjct: 17958 tatatatgtgtatatataac 17939
>gb|AC087436.5| Homo sapiens chromosome 8, clone RP11-81A21, complete sequence Length = 101196 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 963 cctatatatgtgtatatata 944
>gb|AC119744.3| Homo sapiens 3 BAC RP11-744O11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 100400 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 16938 cctatatatgtgtatatata 16957
>gb|AC127891.2| Homo sapiens 12 BAC RP11-91I24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 113065 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 54742 cctatatatgtgtatatata 54761
>gb|AC129031.1| Homo sapiens 12 BAC RP11-106H17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 88645 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 28322 cctatatatgtgtatatata 28341
>gb|AC113187.6| Homo sapiens chromosome 15, clone RP11-924B20, complete sequence Length = 205998 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tatatatgtgtatatataac 40 |||||||||||||||||||| Sbjct: 48761 tatatatgtgtatatataac 48780 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tatatatgtgtatatataac 40 |||||||||||||||||||| Sbjct: 48731 tatatatgtgtatatataac 48750 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tatatatgtgtatatataac 40 |||||||||||||||||||| Sbjct: 48703 tatatatgtgtatatataac 48722 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tatatatgtgtatatataac 40 |||||||||||||||||||| Sbjct: 48197 tatatatgtgtatatataac 48216
>gb|AC087269.5| Homo sapiens chromosome 8, clone RP11-211C9, complete sequence Length = 187924 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ctatatatgtgtatatataa 39 |||||||||||||||||||| Sbjct: 32455 ctatatatgtgtatatataa 32436
>gb|AC092832.7| Homo sapiens X BAC RP11-494I9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 196491 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tatatatgtgtatatataac 40 |||||||||||||||||||| Sbjct: 136529 tatatatgtgtatatataac 136548
>gb|AC023687.3| Drosophila melanogaster X BAC RP98-36C7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 185848 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 ctcctcattgcagactgggc 415 |||||||||||||||||||| Sbjct: 93358 ctcctcattgcagactgggc 93339
>gb|AC087224.13| Homo sapiens chromosome 18, clone RP11-52C21, complete sequence Length = 156222 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ctatatatgtgtatatataa 39 |||||||||||||||||||| Sbjct: 104325 ctatatatgtgtatatataa 104344
>gb|AC107928.3| Homo sapiens chromosome 11, clone RP11-412L22, complete sequence Length = 160764 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 117062 cctatatatgtgtatatata 117043
>gb|AC109480.3| Homo sapiens chromosome 5 clone RP11-455B3, complete sequence Length = 191923 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 tatatgtgtatatataacat 42 |||||||||||||||||||| Sbjct: 115219 tatatgtgtatatataacat 115200 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 tatatgtgtatatataacat 42 |||||||||||||||||||| Sbjct: 115189 tatatgtgtatatataacat 115170 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 tatatgtgtatatataacat 42 |||||||||||||||||||| Sbjct: 115159 tatatgtgtatatataacat 115140
>gb|AC104137.5| Homo sapiens BAC clone RP11-807H7 from 4, complete sequence Length = 195930 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 57925 cctatatatgtgtatatata 57906
>gb|AC022017.8| Homo sapiens chromosome 10 clone RP11-210G22, complete sequence Length = 180165 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 tatatatgtgtatatataacattt 44 ||||||| |||||||||||||||| Sbjct: 166861 tatatatatgtatatataacattt 166884
>dbj|AK134414.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030473K11 product:unclassifiable, full insert sequence Length = 1236 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 atgtcctatatatgtgtatatata 38 ||||| |||||||||||||||||| Sbjct: 155 atgtcatatatatgtgtatatata 178
>gb|AC100822.2| Homo sapiens chromosome 8, clone RP11-654O1, complete sequence Length = 186380 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataac 40 |||||||||||||||||||| Sbjct: 33785 tatatatgtgtatatataac 33766
>gb|AC084358.19| Homo sapiens 12p BAC RP11-418C2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 169949 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 166729 cctatatatgtgtatatata 166710
>gb|AC093913.2| Homo sapiens BAC clone RP11-768G3 from 4, complete sequence Length = 192059 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tatatatgtgtatatataac 40 |||||||||||||||||||| Sbjct: 155031 tatatatgtgtatatataac 155050
>gb|AC149092.6| Pan troglodytes BAC clone CH251-553I6 from chromosome 7, complete sequence Length = 194702 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 73482 cctatatatgtgtatatata 73501
>gb|AC010599.8| Homo sapiens chromosome 5 clone CTC-561L20, complete sequence Length = 114411 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataacattt 44 ||||||||| |||||||||||||| Sbjct: 52428 tatatatgtatatatataacattt 52405
>gb|AC161019.3| Pan troglodytes BAC clone CH251-7O2 from chromosome 7, complete sequence Length = 165769 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 62004 cctatatatgtgtatatata 61985
>gb|AC060761.10| Mus musculus chromosome 17, clone RP23-218D19, complete sequence Length = 228922 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ctatatatgtgtatatataa 39 |||||||||||||||||||| Sbjct: 192522 ctatatatgtgtatatataa 192541
>gb|AC156504.5| Mus musculus 10 BAC RP24-315I19 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 208535 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 72515 cctatatatgtgtatatata 72496
>gb|AC026414.6| Homo sapiens chromosome 5 clone CTD-2036A18, complete sequence Length = 148065 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 83536 cctatatatgtgtatatata 83555
>emb|AL512584.13| Mouse DNA sequence from clone RP23-232D1 on chromosome 2, complete sequence Length = 141386 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 atgtcctatatatgtgtatatata 38 ||||| |||||||||||||||||| Sbjct: 66825 atgtcatatatatgtgtatatata 66802
>gb|AC073057.6| Homo sapiens BAC clone RP11-114G11 from 7, complete sequence Length = 178105 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 163297 cctatatatgtgtatatata 163278 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 163143 cctatatatgtgtatatata 163124
>gb|AC135862.4| Mus musculus BAC clone RP23-323B2 from chromosome 10, complete sequence Length = 203324 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 atatatgtgtatatataacattta 45 |||||| ||||||||||||||||| Sbjct: 200546 atatatatgtatatataacattta 200523
>gb|AC008903.7| Homo sapiens chromosome 5 clone CTD-2252H11, complete sequence Length = 148688 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataacattt 44 ||||||||| |||||||||||||| Sbjct: 36153 tatatatgtatatatataacattt 36130
>gb|AC019230.5|AC019230 Homo sapiens BAC clone RP11-571O22 from X, complete sequence Length = 179483 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ctatatatgtgtatatataa 39 |||||||||||||||||||| Sbjct: 134575 ctatatatgtgtatatataa 134556
>gb|AC158666.3| Mus musculus 6 BAC RP23-11A20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188927 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 aagattgtccattatcatca 343 |||||||||||||||||||| Sbjct: 134308 aagattgtccattatcatca 134289
>gb|AC155329.7| Mus musculus 6 BAC RP24-183K24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 146487 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 aagattgtccattatcatca 343 |||||||||||||||||||| Sbjct: 127810 aagattgtccattatcatca 127829
>emb|BX088593.12| Zebrafish DNA sequence from clone DKEY-6E12 in linkage group 18, complete sequence Length = 251217 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ggtgcaatacttgacaaacc 107 |||||||||||||||||||| Sbjct: 134758 ggtgcaatacttgacaaacc 134777
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 3843266 cctatatatgtgtatatata 3843285
>gb|AC022710.10|AC022710 Homo sapiens chromosome 15, clone RP11-90E5, complete sequence Length = 186517 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tatatatgtgtatatataac 40 |||||||||||||||||||| Sbjct: 132712 tatatatgtgtatatataac 132731 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tatatatgtgtatatataac 40 |||||||||||||||||||| Sbjct: 132682 tatatatgtgtatatataac 132701 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tatatatgtgtatatataac 40 |||||||||||||||||||| Sbjct: 132654 tatatatgtgtatatataac 132673 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tatatatgtgtatatataac 40 |||||||||||||||||||| Sbjct: 132086 tatatatgtgtatatataac 132105
>gb|AC105762.4| Homo sapiens BAC clone RP11-689P15 from 2, complete sequence Length = 76326 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 74242 cctatatatgtgtatatata 74223
>gb|AC010598.6| Homo sapiens chromosome 5 clone CTC-560O9, complete sequence Length = 174551 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 21 tatatatgtgtatatataacatttacaa 48 ||||||| ||||||||||| |||||||| Sbjct: 69916 tatatatatgtatatataaaatttacaa 69943
>gb|AC154744.2| Mus musculus BAC clone RP24-394N17 from chromosome 12, complete sequence Length = 165140 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 atatatgtgtatatataacattta 45 |||||| ||||||||||||||||| Sbjct: 85471 atatatatgtatatataacattta 85448
>gb|AC009080.8| Homo sapiens chromosome 16 clone RP11-341K23, complete sequence Length = 178099 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 atgtcctatatatgtgtatatata 38 |||| ||||||||||||||||||| Sbjct: 5928 atgtactatatatgtgtatatata 5951
>gb|AC004617.2|AC004617 Homo sapiens chromosome Y, clone 264,M,20, complete sequence Length = 175223 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 atatatgtgtatatataacattta 45 |||||| ||||||||||||||||| Sbjct: 154029 atatatatgtatatataacattta 154052
>gb|AC148599.2| Xenopus tropicalis clone CH216-2G20, complete sequence Length = 206059 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 tatatgtgtatatataacat 42 |||||||||||||||||||| Sbjct: 92518 tatatgtgtatatataacat 92499
>gb|AY189527.1| Cryptosporidium parvum putative single stranded G-strand telomeric DNA-binding protein (GBP) mRNA, complete cds Length = 1433 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 atatatgtgtatatataacattta 45 |||||| ||||||||||||||||| Sbjct: 116 atatatatgtatatataacattta 139
>gb|DQ217943.1| Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif 17 (ADAMTS17) gene, complete cds; and 5S ribosomal RNA gene, complete sequence Length = 371157 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataac 40 |||||||||||||||||||| Sbjct: 181956 tatatatgtgtatatataac 181937 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataac 40 |||||||||||||||||||| Sbjct: 181388 tatatatgtgtatatataac 181369 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataac 40 |||||||||||||||||||| Sbjct: 181360 tatatatgtgtatatataac 181341 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataac 40 |||||||||||||||||||| Sbjct: 181330 tatatatgtgtatatataac 181311
>gb|AC026368.37| Homo sapiens 12 BAC RP11-103B5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 177594 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 atgtcctatatatgtgtatatata 38 |||| ||||||||||||||||||| Sbjct: 40508 atgtactatatatgtgtatatata 40531
>gb|AC131011.5| Homo sapiens X BAC RP13-314C10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 176121 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 103768 cctatatatgtgtatatata 103749
>gb|AY085078.1| Arabidopsis thaliana clone 126615 mRNA, complete sequence Length = 1384 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 atatatgtgtatatataaca 41 |||||||||||||||||||| Sbjct: 1327 atatatgtgtatatataaca 1308
>gb|AC069410.10| Homo sapiens 3 BAC RP11-32M21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 176924 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 acatttacaatcttgcttcagact 62 ||||||| |||||||||||||||| Sbjct: 15006 acatttataatcttgcttcagact 14983
>emb|BX664619.13| Mouse DNA sequence from clone RP23-349B9 on chromosome 11, complete sequence Length = 154608 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 tacattttttcttaaagcac 265 |||||||||||||||||||| Sbjct: 16608 tacattttttcttaaagcac 16627
>gb|AC157826.2| Pan troglodytes BAC clone CH251-276A2 from chromosome unknown, complete sequence Length = 185414 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 75341 cctatatatgtgtatatata 75360
>gb|AC154502.2| Mus musculus BAC clone RP24-87I20 from chromosome 13, complete sequence Length = 183319 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ctatatatgtgtatatataa 39 |||||||||||||||||||| Sbjct: 104349 ctatatatgtgtatatataa 104368
>emb|BX088590.7| Pig DNA sequence from clone XX-591C4, complete sequence Length = 165790 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 8631 cctatatatgtgtatatata 8650
>dbj|AP004113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_A06 Length = 176062 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 99598 cctatatatgtgtatatata 99617
>dbj|AP004836.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G02 Length = 187265 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 41737 cctatatatgtgtatatata 41756
>dbj|BS000193.1| Pan troglodytes chromosome 22 clone:PTB-117K17, map 22, partial sequences, complete sequence Length = 124920 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 21 tatatatgtgtatatataacatttacaa 48 ||||||||||||||||||| || ||||| Sbjct: 78461 tatatatgtgtatatataatatatacaa 78488
>emb|AL663098.8| Mouse DNA sequence from clone RP23-24L23 on chromosome X, complete sequence Length = 227133 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 tatatgtgtatatataacat 42 |||||||||||||||||||| Sbjct: 13474 tatatgtgtatatataacat 13455
>emb|AL845284.4| Zebrafish DNA sequence from clone DKEY-277C13, complete sequence Length = 226168 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ggtgcaatacttgacaaacc 107 |||||||||||||||||||| Sbjct: 136094 ggtgcaatacttgacaaacc 136113
>dbj|AB018107.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K12B20 Length = 78874 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 atatatgtgtatatataaca 41 |||||||||||||||||||| Sbjct: 54113 atatatgtgtatatataaca 54132
>gb|AC151910.4| Mus musculus BAC clone RP23-67A17 from 14, complete sequence Length = 207254 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 atatatgtgtatatataaca 41 |||||||||||||||||||| Sbjct: 159503 atatatgtgtatatataaca 159522
>emb|BX510959.9| Zebrafish DNA sequence from clone CH211-51A19 in linkage group 20, complete sequence Length = 179085 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 tgtgtatatataacatttac 46 |||||||||||||||||||| Sbjct: 113465 tgtgtatatataacatttac 113446
>gb|AC163763.3| Pan troglodytes BAC clone CH251-180G5 from chromosome unknown, complete sequence Length = 157645 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 116448 cctatatatgtgtatatata 116467
>gb|AC122547.11| Mus musculus chromosome 1, clone RP23-76P20, complete sequence Length = 232651 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tatatatgtgtatatataac 40 |||||||||||||||||||| Sbjct: 58701 tatatatgtgtatatataac 58720
>emb|AL844171.13| Zebrafish DNA sequence from clone DKEY-237G17, complete sequence Length = 172321 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataac 40 |||||||||||||||||||| Sbjct: 148980 tatatatgtgtatatataac 148961
>gb|AE003488.3| Drosophila melanogaster chromosome X, section 40 of 74 of the complete sequence Length = 315134 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 ctcctcattgcagactgggc 415 |||||||||||||||||||| Sbjct: 256780 ctcctcattgcagactgggc 256799
>emb|AL163612.5|CNS01RII Human chromosome 14 DNA sequence BAC R-346L24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 171345 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 26737 cctatatatgtgtatatata 26756 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 26693 cctatatatgtgtatatata 26712
>gb|AC148935.6| Pan troglodytes BAC clone CH251-485J2 from chromosome 7, complete sequence Length = 215177 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 85271 cctatatatgtgtatatata 85290 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 85141 cctatatatgtgtatatata 85160
>emb|CT574563.2| Pan troglodytes chromosome X clone CH251-7J11 map Xq28, complete sequence Length = 204138 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 tatatgtgtatatataacat 42 |||||||||||||||||||| Sbjct: 170815 tatatgtgtatatataacat 170796
>emb|BX469932.7| Mouse DNA sequence from clone RP23-391L6 on chromosome X, complete sequence Length = 116319 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tcctatatatgtgtatatat 37 |||||||||||||||||||| Sbjct: 108756 tcctatatatgtgtatatat 108737
>gb|AC132117.3| Mus musculus BAC clone RP24-162P19 from 6, complete sequence Length = 169683 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataac 40 |||||||||||||||||||| Sbjct: 117734 tatatatgtgtatatataac 117715
>gb|AC122507.5| Mus musculus BAC clone RP24-426K19 from 12, complete sequence Length = 188715 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tatatatgtgtatatataac 40 |||||||||||||||||||| Sbjct: 58236 tatatatgtgtatatataac 58217
>emb|CT010463.9| Mouse DNA sequence from clone RP23-193M19 on chromosome 12, complete sequence Length = 250364 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 atatatgtgtatatataacattta 45 |||||| ||||||||||||||||| Sbjct: 182168 atatatatgtatatataacattta 182145
>dbj|AP006089.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT28L17, TM0153b, complete sequence Length = 92148 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 catatttatcatcattttaatgac 204 ||||||||||||||||||| |||| Sbjct: 22461 catatttatcatcattttattgac 22438
>gb|U59962.1|HSU59962 Human cosmid LL12NC01-N-136B11, located centromeric to the ETV6 gene, chromosome 12p12-13 Length = 38740 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 28043 cctatatatgtgtatatata 28062
>gb|U40369.1|HSU40369 Human spermidine/spermine N1-acetyltransferase (SSAT) gene, complete cds Length = 11200 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 348 cctatatatgtgtatatata 367
>emb|AL845524.5| Mouse DNA sequence from clone RP23-248D22 on chromosome 2, complete sequence Length = 174188 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 atatatgtgtatatataacattta 45 |||||||||||||||||| ||||| Sbjct: 9307 atatatgtgtatatataatattta 9284
>emb|AL805923.6| Mouse DNA sequence from clone RP23-65B16 on chromosome 4, complete sequence Length = 182774 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 81257 cctatatatgtgtatatata 81238
>emb|AL512361.3|CNS07EFA Human chromosome 14 DNA sequence BAC R-326E7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 158305 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 148687 cctatatatgtgtatatata 148706 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cctatatatgtgtatatata 38 |||||||||||||||||||| Sbjct: 148643 cctatatatgtgtatatata 148662
>emb|AL808018.7| Mouse DNA sequence from clone RP23-473C10 on chromosome X, complete sequence Length = 172723 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tgcttcagactttacacagt 71 |||||||||||||||||||| Sbjct: 134583 tgcttcagactttacacagt 134602
>emb|AL592112.7| Mouse DNA sequence from clone RP23-87H12 on chromosome 17, complete sequence Length = 158307 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ctatatatgtgtatatataa 39 |||||||||||||||||||| Sbjct: 66039 ctatatatgtgtatatataa 66058 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,487,827 Number of Sequences: 3902068 Number of extensions: 5487827 Number of successful extensions: 238984 Number of sequences better than 10.0: 211 Number of HSP's better than 10.0 without gapping: 211 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 237401 Number of HSP's gapped (non-prelim): 1583 length of query: 541 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 518 effective length of database: 17,143,297,704 effective search space: 8880228210672 effective search space used: 8880228210672 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)