>ZN759_HUMAN (Q8NAF0) Zinc finger protein 579|
          Length = 562

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 32/108 (29%), Positives = 43/108 (39%), Gaps = 10/108 (9%)
 Frame = +2

Query: 116 KSMRQPSTVKR*GYINHKTPSWHVRKCTSCPRSNPAP--LRRHSYMNGALS*TGRKKRRS 289
           K+ R+P+ + R  ++    P   +R C +CPR+ P P  LRRH     A         R 
Sbjct: 79  KAFRRPAHLSR--HLRGHGPQPPLR-CAACPRTFPEPAQLRRHLAQEHAGGEVELAIERV 135

Query: 290 APTLMAAAPQTA*GRSHSGPTATAAA--------SPWARQWRASAPSS 409
           A     A P        S P  TAAA        + W   W A  PS+
Sbjct: 136 AKE--TAEPSWGPQDEGSEPPTTAAAGATEEEAVAAWPETWPAGEPST 181

>DEF5_RABIT (P07467) Neutrophil antibiotic peptide NP-4 precursor (Microbicidal|
           peptide NP-4)
          Length = 95

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 19/49 (38%), Positives = 22/49 (44%)
 Frame = -2

Query: 423 HSAAGDDGADARHCRAQGDAAAVAVGPECERPYAVCGAAAISVGALRRF 277
           HS   DDG D +  RAQ    AV +  +   P  V GA A      RRF
Sbjct: 22  HSGMADDGVDQQQPRAQDLDVAVYIKQDETSPLEVLGAKAGVSCTCRRF 70

>CWC27_ASHGO (Q75A74) Peptidyl-prolyl isomerase CWC27 (EC 5.2.1.8)|
          Length = 303

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 22/67 (32%), Positives = 27/67 (40%)
 Frame = -2

Query: 450 AAHAQGHPPHSAAGDDGADARHCRAQGDAAAVAVGPECERPYAVCGAAAISVGALRRFFR 271
           A H    PP  A    G+D+  C A  D  A A  P  + P + C + A   G       
Sbjct: 213 ALHGDSPPPRPAEAPRGSDSAPCVASPDRRAEA-APPTDGPPSRCASLA---GPAPASPG 268

Query: 270 PVYDRAP 250
           PV D AP
Sbjct: 269 PVTDLAP 275

>DEF6_RABIT (P07466) Neutrophil antibiotic peptide NP-5 precursor (Microbicidal|
           peptide NP-5)
          Length = 95

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = -2

Query: 423 HSAAGDDGADARHCRAQGDAAAVAVGPECERPYAVCGAAA 304
           HS   DDG D +  RAQ    AV +  +   P  V GA A
Sbjct: 22  HSGMADDGVDQQQPRAQDLDVAVYIKQDETSPLEVLGAKA 61

>NPD_STAAW (Q8NVC8) NAD-dependent deacetylase (EC 3.5.1.-) (Regulatory protein|
           SIR2 homolog)
          Length = 243

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 13/29 (44%), Positives = 22/29 (75%)
 Frame = +2

Query: 17  FINTRMNIVHDFITKICKKKAKQSCALIT 103
           F++T+ NIVHD+I K+  ++ +QS  +IT
Sbjct: 78  FVDTKPNIVHDWIAKL--ERNQQSLGVIT 104

>NPD_STAAS (Q6G7B7) NAD-dependent deacetylase (EC 3.5.1.-) (Regulatory protein|
           SIR2 homolog)
          Length = 243

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 13/29 (44%), Positives = 22/29 (75%)
 Frame = +2

Query: 17  FINTRMNIVHDFITKICKKKAKQSCALIT 103
           F++T+ NIVHD+I K+  ++ +QS  +IT
Sbjct: 78  FVDTKPNIVHDWIAKL--ERNQQSLGVIT 104

>NPD_STAAN (P66816) NAD-dependent deacetylase (EC 3.5.1.-) (Regulatory protein|
           SIR2 homolog)
          Length = 243

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 13/29 (44%), Positives = 22/29 (75%)
 Frame = +2

Query: 17  FINTRMNIVHDFITKICKKKAKQSCALIT 103
           F++T+ NIVHD+I K+  ++ +QS  +IT
Sbjct: 78  FVDTKPNIVHDWIAKL--ERNQQSLGVIT 104

>NPD_STAAM (P66815) NAD-dependent deacetylase (EC 3.5.1.-) (Regulatory protein|
           SIR2 homolog)
          Length = 243

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 13/29 (44%), Positives = 22/29 (75%)
 Frame = +2

Query: 17  FINTRMNIVHDFITKICKKKAKQSCALIT 103
           F++T+ NIVHD+I K+  ++ +QS  +IT
Sbjct: 78  FVDTKPNIVHDWIAKL--ERNQQSLGVIT 104


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,737,323
Number of Sequences: 219361
Number of extensions: 1003243
Number of successful extensions: 3092
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3090
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)