ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart55b01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC... 190 3e-45
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 58 3e-05
3gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 geno... 58 3e-05
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
5ref|NM_186256.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
6ref|XM_476609.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
8dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
9dbj|AK108823.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
10ref|NM_186254.2| Oryza sativa (japonica cultivar-group), mRNA 50 0.006
11dbj|AK108897.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
12gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxyl... 44 0.39
13emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome... 44 0.39
14emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 44 0.39
15ref|XM_468118.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
16gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 42 1.6
17gb|L77912.1|MZEPAL Zea mays phenylalanine ammonia-lyase mRNA, co... 42 1.6
18dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
19dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
20dbj|AP003613.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
21emb|BX569787.4| Zebrafish DNA sequence from clone CH211-208H1 in... 42 1.6
22dbj|AP004257.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
23gb|AF065769.1|AF065769 Stealth virus 1 clone 3B417 T3 42 1.6
24gb|AY103647.1| Zea mays PCO142084 mRNA sequence 42 1.6
25gb|U27613.1|SVU27613 Stealth virus 1 clone 3B310T3 42 1.6
26ref|NM_197283.1| Oryza sativa (japonica cultivar-group) putative... 40 6.2
27ref|XM_581410.2| PREDICTED: Bos taurus similar to GTP-binding pr... 40 6.2
28gb|BC112722.1| Bos taurus Ras-related associated with diabetes, ... 40 6.2
29ref|NM_004165.1| Homo sapiens Ras-related associated with diabet... 40 6.2
30gb|AC093693.4| Homo sapiens BAC clone RP11-761E14 from 7, comple... 40 6.2
31gb|AC145985.2| Pan troglodytes BAC clone RP43-17I24 from 7, comp... 40 6.2
32emb|AL359741.9| Human DNA sequence from clone RP11-161P17 on chr... 40 6.2
33emb|BX029397.1|CNS08UUH Single read from an extremity of a full-... 40 6.2
34emb|X62276.1|AVNANH A.viscosus nanH gene for sialidase 40 6.2
35emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genom... 40 6.2
36gb|BC057815.1| Homo sapiens Ras-related associated with diabetes... 40 6.2
37gb|AC091122.10| Oryza sativa chromosome 10 BAC OSJNBb0091N21 gen... 40 6.2
38gb|AC078873.22| Homo sapiens 12q BAC RP11-916O13 (Roswell Park C... 40 6.2
39gb|AC027131.6| Homo sapiens chromosome 16 clone RP11-317I8, comp... 40 6.2
40gb|AF324972.1|AF324972 Drosophila melanica dopa decarboxylase (D... 40 6.2
41emb|BX649559.12| Zebrafish DNA sequence from clone DKEY-33C3 in ... 40 6.2
42gb|AC022731.4|AC022731 Homo sapiens chromosome 8, clone RP11-382... 40 6.2
43gb|BC053229.1| Danio rerio actin related protein 2/3 complex, su... 40 6.2
44dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
45dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
46gb|AC009084.9| Homo sapiens chromosome 16 clone RP11-361L15, com... 40 6.2
47ref|NM_213156.1| Danio rerio actin related protein 2/3 complex, ... 40 6.2
48dbj|AP005172.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
49gb|BC011645.2| Homo sapiens Ras-related associated with diabetes... 40 6.2
50dbj|AK060639.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
51gb|U18082.1|SPU18082 Streptomyces peucetius daunorubicin and dox... 40 6.2
52gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
53gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
54emb|AL831795.4|CNS08CA8 Oryza sativa chromosome 12, . BAC OSJNBb... 40 6.2
55emb|AL731876.3|CNS08C8G Oryza sativa chromosome 12, . BAC OJ1194... 40 6.2
56gb|U46165.1|HSU46165 Human Rad GTPase gene, complete cds 40 6.2
57gb|U09844.1|SPU09844 Streptomyces peucetius caesius aklavinone C... 40 6.2
58gb|L24564.1|HUMRAD Human Rad mRNA, complete cds 40 6.2
59gb|L06898.1|ACYSIALID Actinomyces viscosus sialidase (nanH) gene... 40 6.2 
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete
             sequence
          Length = 101158

 Score =  190 bits (96), Expect = 3e-45
 Identities = 114/120 (95%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatgccaaacttcagattcattaacactcgaatgaatattgttcacgactttattacaaa 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88954 aatgccaaacttcagattcattaacactcgaatgaatattgttcacgactttattacaaa 89013

                                                                         
Query: 61    aatctgcaagaaaaaggcgaaacagtcctgcgcattaataaccttttccaacgaaaagtc 120
             ||||||| ||| ||||||| ||||| ||| |||||| |||||||||||||||||||||||
Sbjct: 89014 aatctgctagagaaaggcggaacagacctccgcattcataaccttttccaacgaaaagtc 89073



 Score =  182 bits (92), Expect = 7e-43
 Identities = 113/120 (94%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatgccaaacttcagattcattaacactcgaatgaatattgttcacgactttattacaaa 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78057 aatgccaaacttcagattcattaacactcgaatgaatattgttcacgactttattacaaa 78116

                                                                         
Query: 61    aatctgcaagaaaaaggcgaaacagtcctgcgcattaataaccttttccaacgaaaagtc 120
             | ||||| ||| ||||||| ||||| ||| |||||| |||||||||||||||||||||||
Sbjct: 78117 agtctgctagagaaaggcggaacagacctccgcattcataaccttttccaacgaaaagtc 78176



 Score =  174 bits (88), Expect = 2e-40
 Identities = 112/120 (93%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatgccaaacttcagattcattaacactcgaatgaatattgttcacgactttattacaaa 60
             ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83491 aatgccaaacttcagtttcattaacactcgaatgaatattgttcacgactttattacaaa 83550

                                                                         
Query: 61    aatctgcaagaaaaaggcgaaacagtcctgcgcattaataaccttttccaacgaaaagtc 120
             | ||||| ||| ||||||| ||||| ||| |||||| |||||||||||||||||||||||
Sbjct: 83551 agtctgctagagaaaggcggaacagacctccgcattcataaccttttccaacgaaaagtc 83610
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                            
Query: 292      gcctacgctgatggcggcggcgccgcaaacggcatagggacgttcacattcgggaccaac 351
                |||||||| ||||| |||||||||   |||||||| || ||||||||  ||||||   ||
Sbjct: 32124644 gcctacgccgatggaggcggcgcctggaacggcatgggcacgttcacggtcgggatggac 32124585

                                     
Query: 352      ggcaacggcggcagcgtcacc 372
                |||| ||||||||||||||||
Sbjct: 32124584 ggcatcggcggcagcgtcacc 32124564
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>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete
              sequence
          Length = 178158

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                          
Query: 292    gcctacgctgatggcggcggcgccgcaaacggcatagggacgttcacattcgggaccaac 351
              |||||||| ||||| |||||||||   |||||||| || ||||||||  ||||||   ||
Sbjct: 125769 gcctacgccgatggaggcggcgcctggaacggcatgggcacgttcacggtcgggatggac 125710

                                   
Query: 352    ggcaacggcggcagcgtcacc 372
              |||| ||||||||||||||||
Sbjct: 125709 ggcatcggcggcagcgtcacc 125689
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                            
Query: 292      gcctacgctgatggcggcggcgccgcaaacggcatagggacgttcacattcgggaccaac 351
                |||||||| ||||| |||||||||   |||||||| || ||||||||  ||||||   ||
Sbjct: 32215156 gcctacgccgatggaggcggcgcctggaacggcatgggcacgttcacggtcgggatggac 32215097

                                     
Query: 352      ggcaacggcggcagcgtcacc 372
                |||| ||||||||||||||||
Sbjct: 32215096 ggcatcggcggcagcgtcacc 32215076
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>ref|NM_186256.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 507

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 352 ggcaacggcggcagcgtcaccttgggcacg 381
           |||| |||||||||||||||||||||||||
Sbjct: 464 ggcatcggcggcagcgtcaccttgggcacg 435



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 350 acggcaacggcggcagcgtcaccttgggcacg 381
           |||||| |||||||||||||||||| ||||||
Sbjct: 424 acggcatcggcggcagcgtcaccttcggcacg 393



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 352 ggcaacggcggcagcgtcaccttgggcacg 381
           |||| ||||||||||| |||||||||||||
Sbjct: 278 ggcatcggcggcagcgccaccttgggcacg 249
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>ref|XM_476609.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 858

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 352 ggcaacggcggcagcgtcaccttgggcacg 381
           |||| |||||||||||||||||||||||||
Sbjct: 591 ggcatcggcggcagcgtcaccttgggcacg 562



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 350 acggcaacggcggcagcgtcaccttgggcacg 381
           |||||| |||||||||||||||||| ||||||
Sbjct: 551 acggcatcggcggcagcgtcaccttcggcacg 520
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                             
Query: 352     ggcaacggcggcagcgtcaccttgggcacg 381
               |||| |||||||||||||||||||||||||
Sbjct: 2214513 ggcatcggcggcagcgtcaccttgggcacg 2214484



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                             
Query: 352     ggcaacggcggcagcgtcaccttgggcacg 381
               |||| |||||||||||||||||||||||||
Sbjct: 2212378 ggcatcggcggcagcgtcaccttgggcacg 2212349



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                            
Query: 352     ggcaacggcggcagcgtcaccttgggcac 380
               |||| ||||||||||||||||||||||||
Sbjct: 2209511 ggcatcggcggcagcgtcaccttgggcac 2209483



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                               
Query: 350     acggcaacggcggcagcgtcaccttgggcacg 381
               |||||| |||||||||||||||||| ||||||
Sbjct: 2214473 acggcatcggcggcagcgtcaccttcggcacg 2214442



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                               
Query: 350     acggcaacggcggcagcgtcaccttgggcacg 381
               |||||| |||||||||||||||||| ||||||
Sbjct: 2212338 acggcatcggcggcagcgtcaccttcggcacg 2212307



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                               
Query: 350     acggcaacggcggcagcgtcaccttgggcacg 381
               |||||| |||||||||||||||||| ||||||
Sbjct: 2209471 acggcatcggcggcagcgtcaccttcggcacg 2209440



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 352     ggcaacggcggcagcgtcaccttgggcacg 381
               |||| ||||||||||| |||||||||||||
Sbjct: 2214327 ggcatcggcggcagcgccaccttgggcacg 2214298



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 348      caacggcaacggcggcagcg 367
                ||||||||||||||||||||
Sbjct: 10087508 caacggcaacggcggcagcg 10087527
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>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1351_C05
          Length = 112465

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                           
Query: 352   ggcaacggcggcagcgtcaccttgggcacg 381
             |||| |||||||||||||||||||||||||
Sbjct: 82415 ggcatcggcggcagcgtcaccttgggcacg 82386



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                           
Query: 352   ggcaacggcggcagcgtcaccttgggcacg 381
             |||| |||||||||||||||||||||||||
Sbjct: 80280 ggcatcggcggcagcgtcaccttgggcacg 80251



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 352   ggcaacggcggcagcgtcaccttgggcac 380
             |||| ||||||||||||||||||||||||
Sbjct: 77413 ggcatcggcggcagcgtcaccttgggcac 77385



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 350   acggcaacggcggcagcgtcaccttgggcacg 381
             |||||| |||||||||||||||||| ||||||
Sbjct: 82375 acggcatcggcggcagcgtcaccttcggcacg 82344



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 350   acggcaacggcggcagcgtcaccttgggcacg 381
             |||||| |||||||||||||||||| ||||||
Sbjct: 80240 acggcatcggcggcagcgtcaccttcggcacg 80209



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 350   acggcaacggcggcagcgtcaccttgggcacg 381
             |||||| |||||||||||||||||| ||||||
Sbjct: 77373 acggcatcggcggcagcgtcaccttcggcacg 77342



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 352   ggcaacggcggcagcgtcaccttgggcacg 381
             |||| ||||||||||| |||||||||||||
Sbjct: 82229 ggcatcggcggcagcgccaccttgggcacg 82200
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>dbj|AK108823.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-F04, full
           insert sequence
          Length = 858

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 352 ggcaacggcggcagcgtcaccttgggcacg 381
           |||| |||||||||||||||||||||||||
Sbjct: 591 ggcatcggcggcagcgtcaccttgggcacg 562



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 350 acggcaacggcggcagcgtcaccttgggcacg 381
           |||||| |||||||||||||||||| ||||||
Sbjct: 551 acggcatcggcggcagcgtcaccttcggcacg 520
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>ref|NM_186254.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 817

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 352 ggcaacggcggcagcgtcaccttgggcac 380
           |||| ||||||||||||||||||||||||
Sbjct: 536 ggcatcggcggcagcgtcaccttgggcac 508



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 350 acggcaacggcggcagcgtcaccttgggcacg 381
           |||||| |||||||||||||||||| ||||||
Sbjct: 496 acggcatcggcggcagcgtcaccttcggcacg 465
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>dbj|AK108897.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-F01, full
           insert sequence
          Length = 817

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 352 ggcaacggcggcagcgtcaccttgggcac 380
           |||| ||||||||||||||||||||||||
Sbjct: 536 ggcatcggcggcagcgtcaccttgggcac 508



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 350 acggcaacggcggcagcgtcaccttgggcacg 381
           |||||| |||||||||||||||||| ||||||
Sbjct: 496 acggcatcggcggcagcgtcaccttcggcacg 465
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>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and
              SNF2P genes, complete cds; nucellin pseudogene, complete
              sequence; putative transposase, phosphatidylinositol
              phosphatidylcholine transfer protein sec14 cytosolic-like
              protein, and phytochrome P450-like protein genes, complete
              cds; and unknown genes
          Length = 438828

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1      aatgccaaacttcagattcattaacactcgaatgaatattgttcacgactttattaca 58
              |||||||||| ||||||||||| ||| |  ||||||| | ||| ||| ||||||||||
Sbjct: 303408 aatgccaaacctcagattcattcacattaaaatgaatttggttaacggctttattaca 303465
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>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13
          Length = 349606

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 346    accaacggcaacggcggcagcg 367
              ||||||||||||||||||||||
Sbjct: 132761 accaacggcaacggcggcagcg 132782



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 346    accaacggcaacggcggcagcg 367
              ||||||||||||||||||||||
Sbjct: 132161 accaacggcaacggcggcagcg 132182
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>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14
          Length = 316050

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 346    accaacggcaacggcggcagcg 367
              ||||||||||||||||||||||
Sbjct: 142153 accaacggcaacggcggcagcg 142174
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>ref|XM_468118.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1920

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 388 gcgggcatcggcgccatcgtc 408
           |||||||||||||||||||||
Sbjct: 135 gcgggcatcggcgccatcgtc 115
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 426     gagggtgaccttgggcatggg 446
               |||||||||||||||||||||
Sbjct: 3314480 gagggtgaccttgggcatggg 3314500
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>gb|L77912.1|MZEPAL Zea mays phenylalanine ammonia-lyase mRNA, complete cds
          Length = 2488

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 383 caatggcgggcatcggcgccatcgt 407
           |||||||||||| ||||||||||||
Sbjct: 112 caatggcgggcaacggcgccatcgt 136
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 343      gggaccaacggcaacggcggc 363
                |||||||||||||||||||||
Sbjct: 20860591 gggaccaacggcaacggcggc 20860611
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 388      gcgggcatcggcgccatcgtc 408
                |||||||||||||||||||||
Sbjct: 33156683 gcgggcatcggcgccatcgtc 33156663
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>dbj|AP003613.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0458E11
          Length = 148798

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 343    gggaccaacggcaacggcggc 363
              |||||||||||||||||||||
Sbjct: 115266 gggaccaacggcaacggcggc 115286
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>emb|BX569787.4| Zebrafish DNA sequence from clone CH211-208H1 in linkage group 6,
              complete sequence
          Length = 214158

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 33     tgaatattgttcacgactttattac 57
              |||||||||||||| ||||||||||
Sbjct: 117828 tgaatattgttcacaactttattac 117804
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>dbj|AP004257.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1369_G08
          Length = 104190

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 388   gcgggcatcggcgccatcgtc 408
             |||||||||||||||||||||
Sbjct: 72343 gcgggcatcggcgccatcgtc 72323
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>gb|AF065769.1|AF065769 Stealth virus 1 clone 3B417 T3
          Length = 795

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 347 ccaacggcaacggcggcagcg 367
           |||||||||||||||||||||
Sbjct: 497 ccaacggcaacggcggcagcg 517
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>gb|AY103647.1| Zea mays PCO142084 mRNA sequence
          Length = 2598

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 383 caatggcgggcatcggcgccatcgt 407
           |||||||||||| ||||||||||||
Sbjct: 108 caatggcgggcaacggcgccatcgt 132
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>gb|U27613.1|SVU27613 Stealth virus 1 clone 3B310T3
          Length = 672

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 347 ccaacggcaacggcggcagcg 367
           |||||||||||||||||||||
Sbjct: 498 ccaacggcaacggcggcagcg 518
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>ref|NM_197283.1| Oryza sativa (japonica cultivar-group) putative stress-responsive
           protein (OSJNBb0091N21.27), mRNA
          Length = 890

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 298 gctgatggcggcggcgccgc 317
           ||||||||||||||||||||
Sbjct: 152 gctgatggcggcggcgccgc 133
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>ref|XM_581410.2| PREDICTED: Bos taurus similar to GTP-binding protein RAD (RAS
            associated with diabetes) (RAD1) (LOC505165), mRNA
          Length = 1414

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 49   ctttattacaaaaatctgca 68
            ||||||||||||||||||||
Sbjct: 1393 ctttattacaaaaatctgca 1374
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>gb|BC112722.1| Bos taurus Ras-related associated with diabetes, mRNA (cDNA clone
            MGC:137228 IMAGE:8179268), complete cds
          Length = 1450

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 49   ctttattacaaaaatctgca 68
            ||||||||||||||||||||
Sbjct: 1417 ctttattacaaaaatctgca 1398
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>ref|NM_004165.1| Homo sapiens Ras-related associated with diabetes (RRAD), mRNA
          Length = 1443

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 49   ctttattacaaaaatctgca 68
            ||||||||||||||||||||
Sbjct: 1427 ctttattacaaaaatctgca 1408
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>gb|AC093693.4| Homo sapiens BAC clone RP11-761E14 from 7, complete sequence
          Length = 47886

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 415   ggcactgtggggagggtgac 434
             ||||||||||||||||||||
Sbjct: 22105 ggcactgtggggagggtgac 22086
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>gb|AC145985.2| Pan troglodytes BAC clone RP43-17I24 from 7, complete sequence
          Length = 162953

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 415   ggcactgtggggagggtgac 434
             ||||||||||||||||||||
Sbjct: 74337 ggcactgtggggagggtgac 74356
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>emb|AL359741.9| Human DNA sequence from clone RP11-161P17 on chromosome 13 Contains a
              novel pseudogene, complete sequence
          Length = 139877

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     tacaaaaatctgcaagaaaa 74
              ||||||||||||||||||||
Sbjct: 106440 tacaaaaatctgcaagaaaa 106459
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>emb|BX029397.1|CNS08UUH Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA43DG01 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 467

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 295 tacgctgatggcggcggcgc 314
           ||||||||||||||||||||
Sbjct: 421 tacgctgatggcggcggcgc 440
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>emb|X62276.1|AVNANH A.viscosus nanH gene for sialidase
          Length = 4512

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 348  caacggcaacggcggcagcg 367
            ||||||||||||||||||||
Sbjct: 1783 caacggcaacggcggcagcg 1802
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>emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genome; segment 4/16
          Length = 348942

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 357  cggcggcagcgtcaccttgg 376
            ||||||||||||||||||||
Sbjct: 1013 cggcggcagcgtcaccttgg 1032
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>gb|BC057815.1| Homo sapiens Ras-related associated with diabetes, mRNA (cDNA clone
            MGC:71750 IMAGE:30341066), complete cds
          Length = 1482

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 49   ctttattacaaaaatctgca 68
            ||||||||||||||||||||
Sbjct: 1455 ctttattacaaaaatctgca 1436
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>gb|AC091122.10| Oryza sativa chromosome 10 BAC OSJNBb0091N21 genomic sequence, complete
             sequence
          Length = 151991

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 298   gctgatggcggcggcgccgc 317
             ||||||||||||||||||||
Sbjct: 65676 gctgatggcggcggcgccgc 65657
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>gb|AC078873.22| Homo sapiens 12q BAC RP11-916O13 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 190073

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 115   aaagtcaatgagacaaccat 134
             ||||||||||||||||||||
Sbjct: 52592 aaagtcaatgagacaaccat 52611
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>gb|AC027131.6| Homo sapiens chromosome 16 clone RP11-317I8, complete sequence
          Length = 206102

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     ctttattacaaaaatctgca 68
              ||||||||||||||||||||
Sbjct: 120310 ctttattacaaaaatctgca 120329
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>gb|AF324972.1|AF324972 Drosophila melanica dopa decarboxylase (Ddc) gene, exon 4 and
           partial cds
          Length = 1134

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 366 cgtcaccttgggcacgacaa 385
           ||||||||||||||||||||
Sbjct: 519 cgtcaccttgggcacgacaa 538
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>emb|BX649559.12| Zebrafish DNA sequence from clone DKEY-33C3 in linkage group 3,
            complete sequence
          Length = 143056

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 402  catcgtcacctgcggcactg 421
            ||||||||||||||||||||
Sbjct: 3049 catcgtcacctgcggcactg 3030
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>gb|AC022731.4|AC022731 Homo sapiens chromosome 8, clone RP11-382J12, complete sequence
          Length = 163997

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    aaaatctgcaagaaaaaggc 78
             ||||||||||||||||||||
Sbjct: 44072 aaaatctgcaagaaaaaggc 44091
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>gb|BC053229.1| Danio rerio actin related protein 2/3 complex, subunit 1B, mRNA
           (cDNA clone MGC:64056 IMAGE:6793975), complete cds
          Length = 1594

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 402 catcgtcacctgcggcactg 421
           ||||||||||||||||||||
Sbjct: 314 catcgtcacctgcggcactg 333
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 345      gaccaacggcaacggcggca 364
                ||||||||||||||||||||
Sbjct: 10742139 gaccaacggcaacggcggca 10742158
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 298      gctgatggcggcggcgccgc 317
                ||||||||||||||||||||
Sbjct: 19012988 gctgatggcggcggcgccgc 19013007
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>gb|AC009084.9| Homo sapiens chromosome 16 clone RP11-361L15, complete sequence
          Length = 183864

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    ctttattacaaaaatctgca 68
             ||||||||||||||||||||
Sbjct: 36551 ctttattacaaaaatctgca 36570
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>ref|NM_213156.1| Danio rerio actin related protein 2/3 complex, subunit 1B (arpc1b),
           mRNA
          Length = 1594

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 402 catcgtcacctgcggcactg 421
           ||||||||||||||||||||
Sbjct: 314 catcgtcacctgcggcactg 333
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>dbj|AP005172.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0002J01
          Length = 130152

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 348   caacggcaacggcggcagcg 367
             ||||||||||||||||||||
Sbjct: 60184 caacggcaacggcggcagcg 60203
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>gb|BC011645.2| Homo sapiens Ras-related associated with diabetes, mRNA (cDNA clone
            MGC:12812 IMAGE:4299345), complete cds
          Length = 1478

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 49   ctttattacaaaaatctgca 68
            ||||||||||||||||||||
Sbjct: 1439 ctttattacaaaaatctgca 1420
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>dbj|AK060639.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-D09, full
           insert sequence
          Length = 1229

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 298 gctgatggcggcggcgccgc 317
           ||||||||||||||||||||
Sbjct: 165 gctgatggcggcggcgccgc 146
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>gb|U18082.1|SPU18082 Streptomyces peucetius daunorubicin and doxorubicin resistance
            determinant (drrAB) gene, partial cds, and aklavinone
            C-11 hydroxylase (dnrF) gene, complete cds
          Length = 2201

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 438  gggcatgggcggcaacaccg 457
            ||||||||||||||||||||
Sbjct: 1302 gggcatgggcggcaacaccg 1321
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 298      gctgatggcggcggcgccgc 317
                ||||||||||||||||||||
Sbjct: 19024242 gctgatggcggcggcgccgc 19024261
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 345      gaccaacggcaacggcggca 364
                ||||||||||||||||||||
Sbjct: 10741838 gaccaacggcaacggcggca 10741857
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>emb|AL831795.4|CNS08CA8 Oryza sativa chromosome 12, . BAC OSJNBb0085N21 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 135105

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 345    gaccaacggcaacggcggca 364
              ||||||||||||||||||||
Sbjct: 106986 gaccaacggcaacggcggca 107005
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>emb|AL731876.3|CNS08C8G Oryza sativa chromosome 12, . BAC OJ1194_E11 of library Monsanto from
            chromosome 12 of cultivar Nipponbare of ssp. japonica of
            Oryza sativa (rice), complete sequence
          Length = 119388

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 345  gaccaacggcaacggcggca 364
            ||||||||||||||||||||
Sbjct: 8488 gaccaacggcaacggcggca 8507
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>gb|U46165.1|HSU46165 Human Rad GTPase gene, complete cds
          Length = 5510

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 49   ctttattacaaaaatctgca 68
            ||||||||||||||||||||
Sbjct: 5496 ctttattacaaaaatctgca 5477
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>gb|U09844.1|SPU09844 Streptomyces peucetius caesius aklavinone C-11 hydroxylase (dnrF)
            gene, complete cds
          Length = 2200

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 438  gggcatgggcggcaacaccg 457
            ||||||||||||||||||||
Sbjct: 1301 gggcatgggcggcaacaccg 1320
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>gb|L24564.1|HUMRAD Human Rad mRNA, complete cds
          Length = 1443

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 49   ctttattacaaaaatctgca 68
            ||||||||||||||||||||
Sbjct: 1427 ctttattacaaaaatctgca 1408
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>gb|L06898.1|ACYSIALID Actinomyces viscosus sialidase (nanH) gene, complete cds
          Length = 4284

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 348  caacggcaacggcggcagcg 367
            ||||||||||||||||||||
Sbjct: 1374 caacggcaacggcggcagcg 1393


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,324,837
Number of Sequences: 3902068
Number of extensions: 3324837
Number of successful extensions: 71658
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70860
Number of HSP's gapped (non-prelim): 798
length of query: 457
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 435
effective length of database: 17,147,199,772
effective search space: 7459031900820
effective search space used: 7459031900820
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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